Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8250 cluster # 8250       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8250#0 length = 918 sequences # 2  
consensus_8250#1 length = 806 sequences # 3  
consensus_8250#2 length = 676 sequences # 2  
consensus_8250#3 length = 608 sequences # 2  

consensusID : consensus_8250#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 918
fasta sequence
                              [CCGCGCAATCTTCCCGTTCGCCCGAAAAAATGGTGCAAGTGATACAAGTGACCTAAAAAAGACAAAAAGAAGTGAAAAGTGTTAGTGCAAAAAAACCAAAAAAAATGAAACCACCAAAACCATACCAACCTTCCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACTCATCGTGCCACGGGAAGGGTACGCGGGTCGGGGAGCTGTGCATTGGCGGCACACCGAAATGTCCCCCGAGCTATGCGCTAACGGGTGGGCAATGTTACAGCTGCCAGGTGGAGAATGCACAGTGCGCCACGGCGGGCGCTAGCTGCGCCGAAAGCTTCTGCCAGCTGGAACCGCCTCGCTGCAGCTCGTCGGGGGCAATGTTTGATGGGCGGAGTTGCCGGCAGCTTGTGACGAGTAAACCGGTCTGCCCGACCGGCACCAGCCCGGACCGGTACGAGCCAAAGTTCTGCCAGCTCAAGTCGGAGCGGGCCGTGTACAACTGTCCGGCGGAGCATCACTACCAGAACGGGGTGTGCTTGAAGAAGCTGTACAAAACCCCCTCGTGTCCTGTGGATTACAAGCTGCGGAATGGGGCCTGTGTGAAGCGGATCTGCTCCCGCATGTCGTCTGGATCGGCCTGTGGGGATGTTGGTGGCCCGCTGGCTTTAACAACCGGACCAACCGTTTCCTGCGCACAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGTTGGTCCTCTACGGCTCCGACCCAAAACGGGGTGGACCTGTGCTGCATGGTGTACTCACCGCGTATCTGCCGGGACGGTGGCGAGTGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGCCTCACGGAGGACGATCG]

[+] EMBL BM646433             [CCGCGCAATCTTCCCGTTCGCCCGAAAAAATGGTGCAAGTGATACAAGTGACCTAAAAAAGACAAAAAGAAGTGAAAAGTGTTAGTGCAAAAAAACCAAAAAAAATGAAACCACCAAAACCATACCAACCTTCCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACTCATCGTGCCACGGGAAGGGTACGCGGGTCGGGGAGCTGTGCATTGGCGGCACACCGAAATGTCCCCCGAGCTATGCGCTAACGGGTGGGCAATGTTACAGCTGCCAGGTGGAGAATGCACAGTGCGCCACGGCGGGCGCTAGCTGCGCCGAAAGCTTCTGCCAGCTGGAACCGCCTCGCTGCAGCTCGTCGGGGGCAATGTTTGATGGGCGGAGTTGCCGGCAGCTTGTGACGAGTAAACCGGTCTGCCCGACCGGCACCAGCCCGGACCGGTACGAGCCAAAGTTCTGCCAGCTCAAGTCGGAGCGGGCCGTGTACAACTGTCCGGCGGAGCATCACTACCAGAACGGGGTGTGCTTGAAGAAGCTGTACAAAACCCCCTCGTGTCCTGTGGATTACAAGCTGCGGAATGGGGCCTGTGTGAAGCGGATCTGCTCCCGCATGTC                                                                                                                                                                                                                                                            ]
[+] EMBL BM653658             [                                                                                                                                                                                                                                                                                                                                                                                                                                         ccGGGCGGAGTTGCCGGCAGCTTGTGACGAGTAAACCGGTCTGCCCGACCGGCACCAGCCCGGACCGGTACGAGCCAAAGTTCTGCCAGCTCAAGTCGGAGCGGGCCGTGTACAACTGTCCGGCGGAGCATCACTACCAGAACGGGGTGTGCTTGAAGAAGCTGTACAAAACCCCCTCGTGTCCTGTGGATTACAAGCTGCGGAATGGGGCCTGTGTGAAGCGGATCTGCTCCCGCATGTCGTCTGGATCGGCCTGTGGGGATGTTGGTGGCCCGCTGGCTTTAACAACCGGACCAACCGTTTCCTGCGCACAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGTTGGTCCTCTACGGCTCCGACCCAAAACGGGGTGGACCTGTGCTGCATGGTGTACTCACCGCGTATCTGCCGGGACGGTGGCGAGTGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGCCTCACGGAGGACGATCG]


>consensus_8250#0 CCGCGCAATCTTCCCGTTCGCCCGAAAAAATGGTGCAAGTGATACAAGTGACCTAAAAAA GACAAAAAGAAGTGAAAAGTGTTAGTGCAAAAAAACCAAAAAAAATGAAACCACCAAAAC CATACCAACCTTCCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATAC GCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACTCATCGTGCCACGGGAAGGG TACGCGGGTCGGGGAGCTGTGCATTGGCGGCACACCGAAATGTCCCCCGAGCTATGCGCT AACGGGTGGGCAATGTTACAGCTGCCAGGTGGAGAATGCACAGTGCGCCACGGCGGGCGC TAGCTGCGCCGAAAGCTTCTGCCAGCTGGAACCGCCTCGCTGCAGCTCGTCGGGGGCAAT GTTTGATGGGCGGAGTTGCCGGCAGCTTGTGACGAGTAAACCGGTCTGCCCGACCGGCAC CAGCCCGGACCGGTACGAGCCAAAGTTCTGCCAGCTCAAGTCGGAGCGGGCCGTGTACAA CTGTCCGGCGGAGCATCACTACCAGAACGGGGTGTGCTTGAAGAAGCTGTACAAAACCCC CTCGTGTCCTGTGGATTACAAGCTGCGGAATGGGGCCTGTGTGAAGCGGATCTGCTCCCG CATGTCGTCTGGATCGGCCTGTGGGGATGTTGGTGGCCCGCTGGCTTTAACAACCGGACC AACCGTTTCCTGCGCACAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGTTG GTCCTCTACGGCTCCGACCCAAAACGGGGTGGACCTGTGCTGCATGGTGTACTCACCGCG TATCTGCCGGGACGGTGGCGAGTGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTG CCTCACGGAGGACGATCG



consensusID : consensus_8250#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 806
fasta sequence
                              [CGACCCACGCGTCCGCTGTGTGAAGCGCATCTGCTCCCGCATGTCGTCCGGATCGGCCTGTGGGGATGTTGGCGGCCCGCTGGCTTTAACAACCGGAGCAACCGTTTCCTGCGCTCAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGCTGGTCCTCTACGGCTCCGACCCAAAACGGGGTGGATCTGTGCTGCATGGTGTACTCACCGCGAATTTGCCCGGACGGTGGCGAATGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGTCTGACGGAGGACGATCGGATCTATCTGACCGTGTCGCGTACGGTCCGCGTGGGCAATCGGCTGTATGTGGCACCGGCACATCGCAGTGGAACATCCGATTACAACAATGAAGACGATGAGGACGAAGGCGATGATGAGGATCACGACGAAGGCCTCGGGACGGACTGTGCGCAGTGCGAGATTGGACCGGCCAATTGTGCGAAGCACTGCAACACTTACGATTGCGAGGAGCAGGATGAGGAGGAGTGTAACTTTAAGGAGGCAAACACTTTCTGTGCCCAGTACCGCGGGGCGAAGATTTGTGAACATTTTAGTTTGTAATTTTATCGTGCTTGTTTTTGGACATAGCAGGCGTCGAGAAAAGTCCGTGCAATGAAATTGTTTACATACCTTCAAGATTACTTAAATTTATTGTTTGTATTGTTTTAAAAATTCAGCAATATTTGATCTTTTCTTTGCTTTTTTGTGTATTTCTAATAAATCGTTAAAACAGACAA-TTTGAATTTTTTATTGAACGCTTTTACCA]

[+] EMBL BM648196             [CGACCCACGCGTCCGCTGTGTGAAGCGCATCTGCTCCCGCATGTCGTCCGGATCGGCCTGTGGGGATGTTGGCGGCCCGCTGGCTTTAACAACCGGAGCAACCGTTTCCTGCGCTCAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGCTGGTCCTCTACGGCTCCGACCCAAAACGGGGTGGATCTGTGCTGCATGGTGTACTCACCGCGAATTTGCCCGGACGGTGGCGAATGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGTCTGACGGAGGACGATCGGATCTATCTGACCGTGTCGCGTACGGTCCGCGTGGGCAATCAACTGTATGTGGCACCGGCACATCGCAGTGGAGCTTCCGATTACAACGATGAAGACGATGAGGACGAAGGCGATGATGAGGATCATGACGATGGCCTCGGGACGGACTGTGCGCAGTGCGAGATTGGACCGGCCAATTGTGCGAAACACTGTAACACTTACGATTGCGAGGAGCAGGATGAGGAGGAGTGTAACTTTAAGGAGGCAAACACTTTCTGTGCCCAGTACCGCGGGG                                                                                                                                                                                                                                           ]
[+] EMBL BM637968             [                                                                                                ccgAACCGTTTCCTGCGCACAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGCTGGTCCTCTACGGCTCCGGCACAAAACGGGGTGGACCTGTGCTGCATGGTGTACTCACCGCGAATTTGCCCGGACGGTGGCGAGTGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGCCTGACGGAGGACGATCGGATCTATCTGACCGTGTCGCGTACGGTGCGCGTGGGCAATCGGCTGTATGTGGCACCGGCACATCGCAGTGGAACATCCGATTACAACAATGAAGACGATGAGGACGAAGGCGATGATGAGGATCACGACGAAGGCCTCGGGACGGACTGTGCGCAGTGCGAGATTGGACCGGCCAATTGTGCGAAGCACTGCAACACTTACGATTGCGAGGAGCAGGATGAGGAGGAGTGTAACTTTAAGGAGGCAAACACTTTCTGTGCCCAGTACCGCGGGGCGAAGATTTGTGAACATTTTAGTTTGTAATTTTATCGTGCTTGTTTTTGGACATAGCAGGCGTCGAGAAAAGTCCGTGCAATGAAATTGTTTACATACCTTCAAGATTACTTAAATTTATTGTTTGTATTGTTTTAAAAATTCAGCAATATTTGATCTTTTCTTTGCTTTTTTGTGTATTTCTAATAAATCGTTAAAACAGACAA TTTGAATTTTTTATTGAACGCTTTTACCA]
[+] EMBL BM641791             [                                                                                                                                                                                                                                                                                                                                              ccgCGGCTGTATGTGGCACCGGCACATCGCAGTGGAACATCCGATTACAACAATGAAGACGATGAGGACGAAGGCGATGATGAGGATCACGACGAAGGCCTCGGGACGGACTGTGCGCAGTGCGAGATTGGACCGGCCAATTGTGCGAAGCACTGCAACACTTACGATTGCGAGGAGCAGGATGAGGAGGAGTGTAACTTTAAGGAGGCAAACACTTTCTGTGCCCAGTACCGCGGGGCGAAGATTTGTGAACATTTTAGTTTGTAATTTTATCGTGCTTGTTTTTGGACATAGCAGGCGTCGAGAAAAGTCCGTGCAATGAAATTGTTTACATACCTTCAAGATTACTTAAATTTATTGTTTGTATTGTTTTAAAAATTCAGCAATATTTGATCTTTTCTTTGCTTTTTTGTGTATTTCTAATAAATCGTTAAAACAGACAATTTTGAATTTTTTATTGAACGCTT      ]


>consensus_8250#1 CGACCCACGCGTCCGCTGTGTGAAGCGCATCTGCTCCCGCATGTCGTCCGGATCGGCCTG TGGGGATGTTGGCGGCCCGCTGGCTTTAACAACCGGAGCAACCGTTTCCTGCGCTCAGTG TTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGCTGGTCCTCTACGGCTCCGACCCA AAACGGGGTGGATCTGTGCTGCATGGTGTACTCACCGCGAATTTGCCCGGACGGTGGCGA ATGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGTCTGACGGAGGACGATCGGAT CTATCTGACCGTGTCGCGTACGGTCCGCGTGGGCAATCGGCTGTATGTGGCACCGGCACA TCGCAGTGGAACATCCGATTACAACAATGAAGACGATGAGGACGAAGGCGATGATGAGGA TCACGACGAAGGCCTCGGGACGGACTGTGCGCAGTGCGAGATTGGACCGGCCAATTGTGC GAAGCACTGCAACACTTACGATTGCGAGGAGCAGGATGAGGAGGAGTGTAACTTTAAGGA GGCAAACACTTTCTGTGCCCAGTACCGCGGGGCGAAGATTTGTGAACATTTTAGTTTGTA ATTTTATCGTGCTTGTTTTTGGACATAGCAGGCGTCGAGAAAAGTCCGTGCAATGAAATT GTTTACATACCTTCAAGATTACTTAAATTTATTGTTTGTATTGTTTTAAAAATTCAGCAA TATTTGATCTTTTCTTTGCTTTTTTGTGTATTTCTAATAAATCGTTAAAACAGACAATTT GAATTTTTTATTGAACGCTTTTACCA



consensusID : consensus_8250#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 676
fasta sequence
                              [CCGAGGGAACGTACCGCCATGGCAGGCACTGCGTGTATCCGGATGCGCCCGAGTGTGAAGATATCCAGCACGTGGCCACGCAGTGCACCTCGGAGATTGATTCGCGGGGCTACTGTTGGCAGCGGACCGCACCGACCTGTCCGCAGGGGTACCGGTTGCGCGACGATCGTTGCATCGCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGAGCA-TTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGTTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTG-CGGCACGGCGGGTGCTAGCTGCGCCGAAAGCTTCTG]

[+] EMBL BM627530             [CCGAGGGAACGTACCGCCATGGCAGGCACTGCGTGTATCCGGATGCGCCCGAGTGTGAAGATATCCAGCACGTGGCCACGCAGTGCACCTCGGAGATTGATTCGCGGGGCTACTGTTGGCAGCGGACCGCACCGACCTGTCCGCAGGGGTACCGGTTGCGCGACGATCGTTGCATCGCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGAGCA TTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGTTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTG CGGCACGGCGGGTGCTAGCTGCGCCGAAAGCTTCT ]
[+] EMBL BM635207             [                                ccGTATCCGGATGCGCCCGAGTGTGAAGATGTCCAGCACGTGGCCACGCAGTGCACCTCGGAGATTGATTCGCGGGGCTACTGTTGGCAGCGGACCGCACCGACCTGTCCGCAGGGGTACCGGTTGCGCGACGATCGTTGCATCGCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGGGCATTTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGCTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGGTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACTCATCGTGCCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGCCAGGTGGAGAATGCGCAGTGCCGCCACGGTGGGCGCTAGCTGCGCCGAAAGCTTCTG]


>consensus_8250#2 CCGAGGGAACGTACCGCCATGGCAGGCACTGCGTGTATCCGGATGCGCCCGAGTGTGAAG ATATCCAGCACGTGGCCACGCAGTGCACCTCGGAGATTGATTCGCGGGGCTACTGTTGGC AGCGGACCGCACCGACCTGTCCGCAGGGGTACCGGTTGCGCGACGATCGTTGCATCGCCT GCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGG CGGAACGGGTCGCCTGTCCGGCGGAGCATTTTCTGCGCGACGGTTACTGCGTCACGGTGG ACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGTTTCTGCATCG TGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGT TCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGG TGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGGGTACGC GGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGG GCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTGCGGCACGGCGGGTGCTAGCT GCGCCGAAAGCTTCTG



consensusID : consensus_8250#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 608
fasta sequence
                              [CCGCGGACGCGTGGGCGACGATCGTTGCATCGCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGAGCATTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGTTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTGCGGCACGGCGGGTGCTAGCTGCGCCGAAAGCTTCTGCCAGCTGGAACCGCCCCGCTGCAGCTCGTCGGGGGCAATGTTTGATGGGCGCAGTTGCCGGCAGCTTGTGACGAGTA]

[+] EMBL BM648446             [CCGCGGACGCGTGGGCGACGATCGTTGCATCGCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGAGCATTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGTTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTGCGGCACGGCGGGTGCTAGCTGCGCCGAAAGCTTCTGCCAGCTGGAACCGCCCCGCTGCAGCTCGTCGGGGGCAATGTTTGATGGGCGCAGTTGCCGGCAGCTTGTGACGAGTA]
[+] EMBL BM619022             [                           ccgCGCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGAGCATTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTACGCTTTGCAACGGTTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTGCGGCACGGCGGGTGCTAGCTGCGCCGAAAGCTTCTGCCAG                                                                         ]


>consensus_8250#3 CCGCGGACGCGTGGGCGACGATCGTTGCATCGCCTGCCAAAGCGAGAAACCCAACTGCCC TGCCCACCTGGCCATACGGCAGGAGATGTGTACGGCGGAACGGGTCGCCTGTCCGGCGGA GCATTTTCTGCGCGACGGTTACTGCGTCACGGTGGACGTTACGCGCCCGCGGTGTCCTGC CGGGGATTTTACGCTTTGCAACGGTTTCTGCATCGTGCCGTACGTGCACGAGTGTAAGGC CGCGGAGTACGGACTGGCCACGTGTAGCCGCGGGTTCCTGCAGCACGGCAAGTGTGTGGA GCATGCCCGGTGTGCCGATGCGCACCATACGCTGGTGGGTGGCGAGTGTCAGCTGCGCAC GTTCGTCGACGCATCGTGTCACGGGAAGGGTACGCGGGTTGGGGAGCTGTGCATTGGCGG CACGCCGAAATGTCCCCCGAGCTATGCGCTAACGGGCGGTCAATGTTACAGCTGTCAGGT GGAGAATGCACAGTGCGGCACGGCGGGTGCTAGCTGCGCCGAAAGCTTCTGCCAGCTGGA ACCGCCCCGCTGCAGCTCGTCGGGGGCAATGTTTGATGGGCGCAGTTGCCGGCAGCTTGT GACGAGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8250#2      CCGAGGGAACGTACCGCCATGGCAGGCACTGCGTGTATC-CGGATGCGCCCGAGTGTGAA 59
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      ------------------------------------------------------------
consensus_8250#1      -------------CGACCCACGCGTCCGCTGTGTGAAGCGCATCTGCTCCCGCATGTCGT 47
                                                                                  

consensus_8250#2      GATATCCAGCACGTGGCCACGC-AGTGCACCTCGGAGATTGATTCGCGGGGCTACTGTTG 118
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      ------------------------------------------------------------
consensus_8250#1      CCGGATCGGCCTGTGGGGATGTTGGCGGCCCGCTGGCTTTAACAACCGGAGCAACCGTTT 107
                                                                                  

consensus_8250#2      GCAGCGGACCGCACC--GACCTGTCCGCAGGGGTACCGGTTGCGCGACGATCGTTGCATC 176
consensus_8250#3      ------------------------CCGCGGACGCG-----TGGGCGACGATCGTTGCATC 31
consensus_8250#0      ------------------------------------------------------------
consensus_8250#1      CCTGCGCTCAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAGCTGGT--CCTC 165
                                                                                  

consensus_8250#2      GCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACG-GCAGGAGATGTG 235
consensus_8250#3      GCCTGCCAAAGCGAGAAACCCAACTGCCCTGCCCACCTGGCCATACG-GCAGGAGATGTG 90
consensus_8250#0      ------------------------------------------------------------
consensus_8250#1      TACGGCTCCGACCCAAAACGGGGTGGATCTGTGCTGCATGGTGTACTCACCGCGAATTTG 225
                                                                                  

consensus_8250#2      TACGGCGGAACGGGTCGCCTGTCCGGCGGAGCATTTTCTGCGCGACGGTTACTGCGTCAC 295
consensus_8250#3      TACGGCGGAACGGGTCGCCTGTCCGGCGGAGCATTTTCTGCGCGACGGTTACTGCGTCAC 150
consensus_8250#0      ---------------------------------------------------CCGCG-CAA 8
consensus_8250#1      CCCGGACGGTGGCGAATGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTTCTGTCTGAC 285
                                                                         * *    * 

consensus_8250#2      GGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTA-CGCTTTGCAACGGTTTCT 354
consensus_8250#3      GGTGGACGTTACGCGCCCGCGGTGTCCTGCCGGGGATTTTA-CGCTTTGCAACGGTTTCT 209
consensus_8250#0      TCTTCCCGTT-CGC-CCGAAAAAATGGTGCAAGTGATACAAGTGACCTAAAAAAGACAAA 66
consensus_8250#1      GGAGGACGAT-CGGATCTATCTGACCGTGTCGCGTACGGTCCGCGTGGGCAATCGGCTGT 344
                            ** * **   *          **      *              **  *     

consensus_8250#2      GCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCC 414
consensus_8250#3      GCATCGTGCCGTACGTGCACGAGTGTAAGGCCGCGGAGTACGGACTGGCCACGTGTAGCC 269
consensus_8250#0      AAGAAGTG----AAAAGTGTTAGTGCAAAAAAACCAAAAAAAATGAAACCAC-CAAAACC 121
consensus_8250#1      ATGTGGCACCG---GCACATCGCAGTGGAACATCCGATTACAA------CAATGAAGACG 395
                           *                  *        *  *  *         **       * 

consensus_8250#2      GCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATA 474
consensus_8250#3      GCGGGTTCCTGCAGCACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATA 329
consensus_8250#0      ATACCAACCTTC--CACGGCAAGTGTGTGGAGCATGCCCGGTGTGCCGATGCGCACCATA 179
consensus_8250#1      ATGAGGACG------AAGGCGATGATGAGGATCACGACGAAGGCCTCGGGACGGACTGTG 449
                             *       * *** *   ** *** ** * *    *   **   ** **  * 

consensus_8250#2      CGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGG 534
consensus_8250#3      CGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACGCATCGTGTCACGGGAAGG 389
consensus_8250#0      CGCTGGTGGGTGGCGAGTGTCAGCTGCGCACGTTCGTCGACTCATCGTGCCACGGGAAGG 239
consensus_8250#1      CGC-AGTGCGAGATTGG-ACCGGCCAATTGTGCGAAGCACTGCAACAC-TTACGATTGCG 506
                      ***  *** * *    *   * **       *     *    ** *     ***     *

consensus_8250#2      GTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGC 594
consensus_8250#3      GTACGCGGGTTGGGGAGCTGTGCATTGGCGGCACGCCGAAATGTCCCCCGAGCTATGCGC 449
consensus_8250#0      GTACGCGGGTCGGGGAGCTGTGCATTGGCGGCACACCGAAATGTCCCCCGAGCTATGCGC 299
consensus_8250#1      AGGAGCAGGATGAGGAGGAGTGTAACTTTAAGGAGGC-AAACACTTTCTGTGCCCAGTAC 565
                          ** **  * ****  *** *            * ***      * * **   *  *

consensus_8250#2      TAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTGCGGCACGGCGGGTG 654
consensus_8250#3      TAACGGGCGGTCAATGTTACAGCTGTCAGGTGGAGAATGCACAGTGCGGCACGGCGGGTG 509
consensus_8250#0      TAACGGGTGGGCAATGTTACAGCTGCCAGGTGGAGAATGCACAGTGCGCCACGGCGGGCG 359
consensus_8250#1      CGCGGGGCGAAGATTTGTGAACATTTTAGTTTGTAATTTTATCGTGCTTGTTTTTGGACA 625
                          *** *   * *  *  *  *   ** * *  * *  *  ****        **   

consensus_8250#2      CTAGCTGCGCCGA-AAGCTTCTG------------------------------------- 676
consensus_8250#3      CTAGCTGCGCCGA-AAGCTTCTGCCAGCTGGAACCGCCC-CGCTGCAGCTCGTCGGGGGC 567
consensus_8250#0      CTAGCTGCGCCGA-AAGCTTCTGCCAGCTGGAACCGCCT-CGCTGCAGCTCGTCGGGGGC 417
consensus_8250#1      TAGCAGGCGTCGAGAAAAGTCCGTGCAATGAAATTGTTTACATACCTTCAAGATTACTTA 685
                            *** *** **   ** *                                     

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      AATGTTTGATGGGCGCAGTTGCCGGCAGCTTGTGACGAGTA------------------- 608
consensus_8250#0      AATGTTTGATGGGCGGAGTTGCCGGCAGCTTGTGACGAGTAAACCGGTCTGCCCGACCGG 477
consensus_8250#1      AATTTATTGTTTGTATTGTTTTAAAAATTCAGCAATATTTGATCTTTTCTTTGCTTTTTT 745
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      CACCAGCCCGGACCGGTACGAGCCAAAGTTCTGCCAGCTCAAGTCGGAGCGGGCCGTGTA 537
consensus_8250#1      GTGTATTTCTAATAAATCGTTAAAACAGACAATTTGAATTTTTTATTGAACGCTTTTACC 805
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      CAACTGTCCGGCGGAGCATCACTACCAGAACGGGGTGTGCTTGAAGAAGCTGTACAAAAC 597
consensus_8250#1      A----------------------------------------------------------- 806
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      CCCCTCGTGTCCTGTGGATTACAAGCTGCGGAATGGGGCCTGTGTGAAGCGGATCTGCTC 657
consensus_8250#1      ------------------------------------------------------------
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      CCGCATGTCGTCTGGATCGGCCTGTGGGGATGTTGGTGGCCCGCTGGCTTTAACAACCGG 717
consensus_8250#1      ------------------------------------------------------------
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      ACCAACCGTTTCCTGCGCACAGTGTTTGAACGAAACGGCCGGCACGATGGGTGGAGGAAG 777
consensus_8250#1      ------------------------------------------------------------
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      TTGGTCCTCTACGGCTCCGACCCAAAACGGGGTGGACCTGTGCTGCATGGTGTACTCACC 837
consensus_8250#1      ------------------------------------------------------------
                                                                                  

consensus_8250#2      ------------------------------------------------------------
consensus_8250#3      ------------------------------------------------------------
consensus_8250#0      GCGTATCTGCCGGGACGGTGGCGAGTGTCGTCACGAGCAGGAGCGTCTTTGCGGTTCCTT 897
consensus_8250#1      ------------------------------------------------------------
                                                                                  

consensus_8250#2      ---------------------
consensus_8250#3      ---------------------
consensus_8250#0      CTGCCTCACGGAGGACGATCG 918
consensus_8250#1      ---------------------
                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)