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Anopheles gambiae
cluster # 8280 cluster # 8280       Sequences # 9       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8280#0 length = 759 sequences # 1  
consensus_8280#1 length = 722 sequences # 1  
consensus_8280#2 length = 706 sequences # 2  
consensus_8280#3 length = 658 sequences # 2  
consensus_8280#4 length = 643 sequences # 1  
consensus_8280#5 length = 603 sequences # 1  
consensus_8280#6 length = 519 sequences # 1  

consensusID : consensus_8280#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 759
fasta sequence
                              [ATCTCCAATCAAACGAACGCGAAAGTGTTCACGCTGCTGAACCGGGCCGGTCTGAAGACCGCGTTCGTGCGCATGATCTCCGACAACGCGTTCCTCGCGCGCAAGTGCGACATGGTGCCGATCGAGTGGGTGACGCGCCGGGTCGCGACCGGTTCGTACCTGAAGCGCAACCCGGGCGTGAAGGAGGGCTACCGCTTTGCGCCGGCCAAGGTCGAGACGTTCTTCAAGGACGACGCGAACGACGATCCGCAGTGGAGCGAGGAGCAGATTGTGTGCGCCGGCTTCAAGGTGAACGGTGTGACGATCGGCCAGGACGAGGCGGACGTGATCGATTCCGACTCGTGGCGCCTCTGGCCGGCGGGCGACAAGCGCATGATGGTGGACAAGCAGGTGTACCGCAATCTGGCGAACGTGACGGCCGCCGATCTCGACGTGGTCAAGCGCAACTTTACCTGGGTCAGCGACGAGCTGGACAAGATGGATGCACCGGCCAGCCACCTGGTGGTCATACTGATGGGGTCCGCCTCGGACAAGGAGCACTGCGAGAAGATCGCCAAGCACTGTGCCGCGCTCGGGCTGAACGCGGAGCTGCGCGTGACGTCCGCGCACAAGGGCACGCAGACGACGCTGCACATGGTGAGCGAGTACGAGAGCGTGCTGAGCGAGCTGGTGTTCATCACGGTGGCGGGCCGGTCGAACGGGCTCGGCCCGGTACTGTCCGGCAACACCAACTATCCCGTCATCAACTGCCCGCCGGTC]

[+] EMBL BX606481             [ATCTCCAATCAAACGAACGCGAAAGTGTTCACGCTGCTGAACCGGGCCGGTCTGAAGACCGCGTTCGTGCGCATGATCTCCGACAACGCGTTCCTCGCGCGCAAGTGCGACATGGTGCCGATCGAGTGGGTGACGCGCCGGGTCGCGACCGGTTCGTACCTGAAGCGCAACCCGGGCGTGAAGGAGGGCTACCGCTTTGCGCCGGCCAAGGTCGAGACGTTCTTCAAGGACGACGCGAACGACGATCCGCAGTGGAGCGAGGAGCAGATTGTGTGCGCCGGCTTCAAGGTGAACGGTGTGACGATCGGCCAGGACGAGGCGGACGTGATCGATTCCGACTCGTGGCGCCTCTGGCCGGCGGGCGACAAGCGCATGATGGTGGACAAGCAGGTGTACCGCAATCTGGCGAACGTGACGGCCGCCGATCTCGACGTGGTCAAGCGCAACTTTACCTGGGTCAGCGACGAGCTGGACAAGATGGATGCACCGGCCAGCCACCTGGTGGTCATACTGATGGGGTCCGCCTCGGACAAGGAGCACTGCGAGAAGATCGCCAAGCACTGTGCCGCGCTCGGGCTGAACGCGGAGCTGCGCGTGACGTCCGCGCACAAGGGCACGCAGACGACGCTGCACATGGTGAGCGAGTACGAGAGCGTGCTGAGCGAGCTGGTGTTCATCACGGTGGCGGGCCGGTCGAACGGGCTCGGCCCGGTACTGTCCGGCAACACCAACTATCCCGTCATCAACTGCCCGCCGGTC]


>consensus_8280#0 ATCTCCAATCAAACGAACGCGAAAGTGTTCACGCTGCTGAACCGGGCCGGTCTGAAGACC GCGTTCGTGCGCATGATCTCCGACAACGCGTTCCTCGCGCGCAAGTGCGACATGGTGCCG ATCGAGTGGGTGACGCGCCGGGTCGCGACCGGTTCGTACCTGAAGCGCAACCCGGGCGTG AAGGAGGGCTACCGCTTTGCGCCGGCCAAGGTCGAGACGTTCTTCAAGGACGACGCGAAC GACGATCCGCAGTGGAGCGAGGAGCAGATTGTGTGCGCCGGCTTCAAGGTGAACGGTGTG ACGATCGGCCAGGACGAGGCGGACGTGATCGATTCCGACTCGTGGCGCCTCTGGCCGGCG GGCGACAAGCGCATGATGGTGGACAAGCAGGTGTACCGCAATCTGGCGAACGTGACGGCC GCCGATCTCGACGTGGTCAAGCGCAACTTTACCTGGGTCAGCGACGAGCTGGACAAGATG GATGCACCGGCCAGCCACCTGGTGGTCATACTGATGGGGTCCGCCTCGGACAAGGAGCAC TGCGAGAAGATCGCCAAGCACTGTGCCGCGCTCGGGCTGAACGCGGAGCTGCGCGTGACG TCCGCGCACAAGGGCACGCAGACGACGCTGCACATGGTGAGCGAGTACGAGAGCGTGCTG AGCGAGCTGGTGTTCATCACGGTGGCGGGCCGGTCGAACGGGCTCGGCCCGGTACTGTCC GGCAACACCAACTATCCCGTCATCAACTGCCCGCCGGTC



consensusID : consensus_8280#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 722
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTAGGCGACAAAACGCTCCGTCAGCTCCGCAAGACATCATTGCTTATCTATTATTTTTGCTGTAAGCGCACACGCAGTAGACCAAATTCTCCGGTGTAGGGCACAACGTTCGCGAAAGGGGTATCCCTGCTACGGCACACAAGCACTAGCGGGCACATGGGCAAACCGCAGCGCTGCAGTGGCCACTTTATTTAGCGTTTTTTTTTGTATGGATGTGTATGTGATGGGTCGAGCGAAGGCAAGATGATGATGATGATGATGATGTTAGGAAGAATTTGTTTGAATATATGATATTTTTTTGTGTCGTTAGTAGAAATAAAAAGTGAAGGTAAAATCACACCGTTGACCCATTTTGGTGGAGCCAAGGCATTACAGGGATGTGTTGTGAGCAGGGAAGCAGCAATGAAACACATAGTAGAGTATTTTGCAGAGCAGCGCGCATGGGTGAGGTGGTAATTTAATTTAACGTGAAACTTTAAATGTTTTGCCTACTCGTGGGGCAGTACAGCAAAACACCGCGCCTAGCGAGAGGAAGAGAGCGAGCGAAACTAATGCAAGAAATTACAGCGCTTTTAGGGAGGTGTACCGACAGAAAACAGTGGTGGTTAGTTTAAGTTTGGGTTGGTTTAGAATCGAAGCGAATATACAAACGGAACGGAACAGCAGCAGCAGTAGTAAGAAGA]

[+] EMBL BM639172             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTAGGCGACAAAACGCTCCGTCAGCTCCGCAAGACATCATTGCTTATCTATTATTTTTGCTGTAAGCGCACACGCAGTAGACCAAATTCTCCGGTGTAGGGCACAACGTTCGCGAAAGGGGTATCCCTGCTACGGCACACAAGCACTAGCGGGCACATGGGCAAACCGCAGCGCTGCAGTGGCCACTTTATTTAGCGTTTTTTTTTGTATGGATGTGTATGTGATGGGTCGAGCGAAGGCAAGATGATGATGATGATGATGATGTTAGGAAGAATTTGTTTGAATATATGATATTTTTTTGTGTCGTTAGTAGAAATAAAAAGTGAAGGTAAAATCACACCGTTGACCCATTTTGGTGGAGCCAAGGCATTACAGGGATGTGTTGTGAGCAGGGAAGCAGCAATGAAACACATAGTAGAGTATTTTGCAGAGCAGCGCGCATGGGTGAGGTGGTAATTTAATTTAACGTGAAACTTTAAATGTTTTGCCTACTCGTGGGGCAGTACAGCAAAACACCGCGCCTAGCGAGAGGAAGAGAGCGAGCGAAACTAATGCAAGAAATTACAGCGCTTTTAGGGAGGTGTACCGACAGAAAACAGTGGTGGTTAGTTTAAGTTTGGGTTGGTTTAGAATCGAAGCGAATATACAAACGGAACGGAACAGCAGCAGCAGTAGTAAGAAGA]


>consensus_8280#1 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTAGGCGACAAAACGCTCCGT CAGCTCCGCAAGACATCATTGCTTATCTATTATTTTTGCTGTAAGCGCACACGCAGTAGA CCAAATTCTCCGGTGTAGGGCACAACGTTCGCGAAAGGGGTATCCCTGCTACGGCACACA AGCACTAGCGGGCACATGGGCAAACCGCAGCGCTGCAGTGGCCACTTTATTTAGCGTTTT TTTTTGTATGGATGTGTATGTGATGGGTCGAGCGAAGGCAAGATGATGATGATGATGATG ATGTTAGGAAGAATTTGTTTGAATATATGATATTTTTTTGTGTCGTTAGTAGAAATAAAA AGTGAAGGTAAAATCACACCGTTGACCCATTTTGGTGGAGCCAAGGCATTACAGGGATGT GTTGTGAGCAGGGAAGCAGCAATGAAACACATAGTAGAGTATTTTGCAGAGCAGCGCGCA TGGGTGAGGTGGTAATTTAATTTAACGTGAAACTTTAAATGTTTTGCCTACTCGTGGGGC AGTACAGCAAAACACCGCGCCTAGCGAGAGGAAGAGAGCGAGCGAAACTAATGCAAGAAA TTACAGCGCTTTTAGGGAGGTGTACCGACAGAAAACAGTGGTGGTTAGTTTAAGTTTGGG TTGGTTTAGAATCGAAGCGAATATACAAACGGAACGGAACAGCAGCAGCAGTAGTAAGAA GA



consensusID : consensus_8280#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 706
fasta sequence
                              [CCGCGGACGCGTGGGCTTTCGGGACAGGATTGCTTTCATTTCCGCGGCCCGGGCCTAGAAATAGGATTTGGACCGTTACGAACCCCTAAACGCCCGTAAACGATGGCCTCCATCCTGCGCTCCTTCGCCTCGGCATTCGCCAAGAGCGGCATGCTCGGCGCAAACGGTATTTCCCGTGCTGCTCCAACAGTAATGCTCCGCTACAAGTCCACCGAACCGGCGGCAGAATCGCGACCGACCGTCCGCAAGCCGGATGCCGCCGCCCGGTCGGAGCTGTCCGAGTTTGGCAAGTACGTCGCGGAGTGCATGCCCAAGTACGTGCAGAAGGTGCAGCTGACGTCCGGCGACGAGCTGGAGGTGCTGATCGCGCCGGAAGGCGTCGTGCCGGTGCTGCAGTTCCTGAAGGACCACCACAACGCACAGTTCGCCAACCTGGTCGACATTGCTGGCATGGATGTGCCGTCCCGGCCGTACCGCTTCGAGATTATCTACAACATACTGTCGCTGCGGTACAACTCGCGCATCCGCGTCAAGACGTACACCGACGAGCTGACGCCGATCGACTCGTGCAACGAGGTGTTCAAGGCGGCCAACTGGTACGAGCGCGAGATCTGGGACATGTACGGCGTGTTCTTCGCGAACCATCCCGACCTGCGCCGCATCCTGACCGACTACGGGTTCGAGGTTCATCTGCAGCGCCGCGACT]

[+] EMBL BM632644             [CCGCGGACGCGTGGGCTTTCGGGACAGGATTGCTTTCATTTCCGCGGCCCGGGCCTAGAAATAGGATTTGGACCGTTACGAACCCCTAAACGCCCGTAAACGATGGCCTCCATCCTGCGCTCCTTCGCCTCGGCATTCGCCAAGAGCGGCATGCTCGGCGCAAACGGTATTTCCCGTGCTGCTCCAACAGTAATGCTCCGCTACAAGTCCACCGAACCGGCGGCAGAATCGCGACCGACCGTCCGCAAGCCGGATGCCGCCGCCCGGTCGGAGCTGTCCGAGTTTGGCAAGTACGTCGCGGAGTGCATGCCCAAGTACGTGCAGAAGGTGCAGCTGACGTCCGGCGACGAGCTGGAGGTGCTGATCGCGCCGGAAGGCGTCGTGCCGGTGCTGCAGTTCCTGAAGGACCACCACAACGCACAGTTCGCCAACCTGGTCGACATTGCTGGCATGGATGTGCCGTCCCGGCCGTACCGCTTCGAGATTATCTACAACATACTGTCGCTGCGGTACAACTCGCGCATCCGCGTCAAGACGTACACCGACGAGCTGACGCCGATCGACTCGTGCAACGAGGTGTTCAAGGCGGCCAACTGGTACGAGCGCGAGATCTGGGACATGTACGGCGTGTTCTTCGCGAACCATCCCGACCTGCGCCGCATCCTGACCG                                    ]
[-] EMBL CNS08E65             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAAAAACTGTCGCTGCGGTACAACTCGCGCATCCGCGTCAAAACGTACACCGACG GGTGACGCCGATCGACTCGTGCAACGAGGTGTTCAAGGCGGCCAACTGGTACGAGCGCGAGTTTTGGGAAATGTACGGCGTGTTCTTCGCGAACCATCCCGACCTGCGCCGCATCCTGACCGACTACGGGTTCGAGGTTCATCTGCAGCGCCGCGACT]


>consensus_8280#2 CCGCGGACGCGTGGGCTTTCGGGACAGGATTGCTTTCATTTCCGCGGCCCGGGCCTAGAA ATAGGATTTGGACCGTTACGAACCCCTAAACGCCCGTAAACGATGGCCTCCATCCTGCGC TCCTTCGCCTCGGCATTCGCCAAGAGCGGCATGCTCGGCGCAAACGGTATTTCCCGTGCT GCTCCAACAGTAATGCTCCGCTACAAGTCCACCGAACCGGCGGCAGAATCGCGACCGACC GTCCGCAAGCCGGATGCCGCCGCCCGGTCGGAGCTGTCCGAGTTTGGCAAGTACGTCGCG GAGTGCATGCCCAAGTACGTGCAGAAGGTGCAGCTGACGTCCGGCGACGAGCTGGAGGTG CTGATCGCGCCGGAAGGCGTCGTGCCGGTGCTGCAGTTCCTGAAGGACCACCACAACGCA CAGTTCGCCAACCTGGTCGACATTGCTGGCATGGATGTGCCGTCCCGGCCGTACCGCTTC GAGATTATCTACAACATACTGTCGCTGCGGTACAACTCGCGCATCCGCGTCAAGACGTAC ACCGACGAGCTGACGCCGATCGACTCGTGCAACGAGGTGTTCAAGGCGGCCAACTGGTAC GAGCGCGAGATCTGGGACATGTACGGCGTGTTCTTCGCGAACCATCCCGACCTGCGCCGC ATCCTGACCGACTACGGGTTCGAGGTTCATCTGCAGCGCCGCGACT



consensusID : consensus_8280#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 658
fasta sequence
                              [CGACCCACGCGTCCGGCTGCTCGACGTGACCCCGCTGTCGCTCGGTATCGAGACGGCGGGCGGCGTGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCGACCAAGCAGACGCAGACGTTCACCACGTACTCGGACAACCAGCCGGGCGTGCTGATCCAGGTGTTCGAGGGCGAGCGCGCCATGACGAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGAGCGGCATCCCGCCGGCACCGCGCGGCGTGCCCCAGATCGAGGTGACGTTCGACATCGACGCGAACGGTATCCTGAACGTGACGGCACTCGAGAAGTCGACCAACAAGGAGAACAAGATCACCATCACGAACGACAAGGGCCGCCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGGCCGAGAAGTACCGCACTGAGGACGAGAAGCAGAAGGAGACCATCTCCGCGAAGAACGCGCTGGAGTCGTACTGCTTCAACATGAAGGCCACCATGGAGGACGACAAGCTGAAGGACAAGATCACCGACAGCGACAAGACCCTGGTGCTGGACAAGTGCAACGACACGATCAAGTGGCTCGATGCCAACCAGCTGGCCGACAAGGAGGAGTACGAGCACCGCCAGAAGGAGCTCGAGTCGGTGTGCAACCCGATC]

[+] EMBL BM626231             [CGACCCACGCGTCCGGCTGCTCGACGTGACCCCGCTGTCGCTCGGTATCGAGACGGCGGGCGGCGTGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCGACCAAGCAGACGCAGACGTTCACCACGTACTCGGACAACCAGCCGGGCGTGCTGATCCAGGTGTTCGAGGGCGAGCGCGCCATGACGAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGAGCGGCATCCCGCCGGCACCGCGCGGCGTGCCCCAGATCGAGGTGACGTTCGACATCGACGCGAACGGTATCCTGAACGTGACGGCACTCGAGAAGTCGACCAACAAGGAGAACAAGATCACCATCACGAACGACAAGGGCCGCCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGGCCGAGAAGTACCGCACTGAGGACGAGAAGCAGAAGGAGACCATCTCCGCGAAGAACGCGCTGGAGTCGTACTGCTTCAACATGAAGGCCACCATGGAGGACGACAAGCTGAAGGACAAGATCACCGACAGCGACAAGACCCTGGTGCTGGACAAGTGCAACGACACGATCAAGTGGCTCGATGCCAACCAGCTGGCCGACAAGGAGGAGTACGAGCACCGCCAGAAGGAGCTCGAGTCGGTGTGCAACCCGATC]
[+] EMBL BX605080             [                                                              GCGTGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCGACCAAGCAGACGCAGACGTTCACCACGTACTCGGACAACCAGCCGGGCGTGCTGATCCAGGTGTTCGAGGGCGAGCGCGCCATGACGAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGAGCGGCATCCCGCCGGCACCGCGCGGCGTGCCCCAGATCGAGGTGACGTTCGACATCGACGCGAACGGTATCCTGAACGTGACGGCGCTCGAGAAGTCGACCAACAAGGAGAACAAGATCACCATCACGAACGACAAGGGCCGCCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGGCCGAGAAGTACCGCACTGAGGACGAGAAGCAGAAGGAGACCATCTCCGCGAAGAACGCGCTGGAGTCGTACTGCTTCAACATGAAGGCCACCATGGAGGACGACAAGCTGAAGGACAAGATCACCGACAGCGACAAGACCCTGGTGCTGGACAAGTGCAACGACACGATCAAGTGGCTCGATGCCAACCAGCTGGCCGACAAGGAGGAGTACGAGCACCGCCAGAAGGAGCTCGA                   ]


>consensus_8280#3 CGACCCACGCGTCCGGCTGCTCGACGTGACCCCGCTGTCGCTCGGTATCGAGACGGCGGG CGGCGTGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCGACCAAGCAGACGCAGAC GTTCACCACGTACTCGGACAACCAGCCGGGCGTGCTGATCCAGGTGTTCGAGGGCGAGCG CGCCATGACGAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGAGCGGCATCCCGCCGGC ACCGCGCGGCGTGCCCCAGATCGAGGTGACGTTCGACATCGACGCGAACGGTATCCTGAA CGTGACGGCACTCGAGAAGTCGACCAACAAGGAGAACAAGATCACCATCACGAACGACAA GGGCCGCCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGGCCGAGAAGTACCGCAC TGAGGACGAGAAGCAGAAGGAGACCATCTCCGCGAAGAACGCGCTGGAGTCGTACTGCTT CAACATGAAGGCCACCATGGAGGACGACAAGCTGAAGGACAAGATCACCGACAGCGACAA GACCCTGGTGCTGGACAAGTGCAACGACACGATCAAGTGGCTCGATGCCAACCAGCTGGC CGACAAGGAGGAGTACGAGCACCGCCAGAAGGAGCTCGAGTCGGTGTGCAACCCGATC



consensusID : consensus_8280#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 643
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAAGAGAGAGAGAGAGAGGAAGGCGAATACGCACGGTGGTGCAACACACGTTGCGCGCGCGATACAAACTAATTTTAAGGGCCAAAATGAGATATGGAAGATTGGATGATGAGTAAGTGTGTTTGTGAAGCTCATGTTTTTTTTTTTAAATCTTTTTTGACTCTTATCTGTCTTTCGAACCCCCTCCCAACACCTTCTTTGGTGTTATATCTGCTTGTTTTGGCAAAATATTATTCATATTTTAAACATCCTCAAATTTTGCACCAATTTTTAACCTTACCGCAGTCGGCATCTCATGCTCCATGTATTAGTATTTTGTGTTGTGTTTGTTTTGTTTTTTGAAAAAAAAAATATGCATTTTCAAACATGAAAATGTGTCTCTGTTGGTACAAAAAAAAAAAAAAACTGTCGTTTCATCCAGGAATGGAATGCAGAAAAACAAAACAAACGCAATCGCCTAGTTTTCGAACGATTCGGAATACAATTCGGACCTTGTATAGTTCCTACCTGCCTCCCCACACCACCAGCACCGGCTCCCCGAGGTTGGTGTCCCCGAGATCGAGAAAGCAAAACGGGAGG]

[+] EMBL BM654833             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAAGAGAGAGAGAGAGAGGAAGGCGAATACGCACGGTGGTGCAACACACGTTGCGCGCGCGATACAAACTAATTTTAAGGGCCAAAATGAGATATGGAAGATTGGATGATGAGTAAGTGTGTTTGTGAAGCTCATGTTTTTTTTTTTAAATCTTTTTTGACTCTTATCTGTCTTTCGAACCCCCTCCCAACACCTTCTTTGGTGTTATATCTGCTTGTTTTGGCAAAATATTATTCATATTTTAAACATCCTCAAATTTTGCACCAATTTTTAACCTTACCGCAGTCGGCATCTCATGCTCCATGTATTAGTATTTTGTGTTGTGTTTGTTTTGTTTTTTGAAAAAAAAAATATGCATTTTCAAACATGAAAATGTGTCTCTGTTGGTACAAAAAAAAAAAAAAACTGTCGTTTCATCCAGGAATGGAATGCAGAAAAACAAAACAAACGCAATCGCCTAGTTTTCGAACGATTCGGAATACAATTCGGACCTTGTATAGTTCCTACCTGCCTCCCCACACCACCAGCACCGGCTCCCCGAGGTTGGTGTCCCCGAGATCGAGAAAGCAAAACGGGAGG]


>consensus_8280#4 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGT CCGAAAAGAGAGAGAGAGAGAGGAAGGCGAATACGCACGGTGGTGCAACACACGTTGCGC GCGCGATACAAACTAATTTTAAGGGCCAAAATGAGATATGGAAGATTGGATGATGAGTAA GTGTGTTTGTGAAGCTCATGTTTTTTTTTTTAAATCTTTTTTGACTCTTATCTGTCTTTC GAACCCCCTCCCAACACCTTCTTTGGTGTTATATCTGCTTGTTTTGGCAAAATATTATTC ATATTTTAAACATCCTCAAATTTTGCACCAATTTTTAACCTTACCGCAGTCGGCATCTCA TGCTCCATGTATTAGTATTTTGTGTTGTGTTTGTTTTGTTTTTTGAAAAAAAAAATATGC ATTTTCAAACATGAAAATGTGTCTCTGTTGGTACAAAAAAAAAAAAAAACTGTCGTTTCA TCCAGGAATGGAATGCAGAAAAACAAAACAAACGCAATCGCCTAGTTTTCGAACGATTCG GAATACAATTCGGACCTTGTATAGTTCCTACCTGCCTCCCCACACCACCAGCACCGGCTC CCCGAGGTTGGTGTCCCCGAGATCGAGAAAGCAAAACGGGAGG



consensusID : consensus_8280#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 603
fasta sequence
                              [TGTGTACTGTTGAAAACGAGAAGATAATGTTGCGAAATGACTGAATATAAGAGGGAGAGAGAGTGTGCGTGTGTGCTGTGCGTTAGAAGAAAGAGTTGTTTACAGAGCATTAGGCGACAACACAACAACAAAACGAAGATAATTGCAACGATGATGTGTGAGAGAGTACGGAAGGGAAATGGTTAGATAAAATTCACAAAATCATTTAAACTATTTTTACATGCACCTCTCTCCCCATTTTCTCGCCCCCCACAAACGCCCCAGCTAAAGAGATGATATATGTAATATTAGCACACACGTGCGCGTGTCTCGCCTCTCCGCACGACGCTGCTGCAGCTGCTGTTCACTCTCTTTGGAAATTTGAAGACTCTTTCGAAGGAGGACACGAATCGATTGAACTAAATGAAGCGCGAATTCGTTCAAGTTACATATAGGCACACACACACACACCGGCAGAAAAGGAGAAGCAAATTTATGTGAAATCTAGAAAAGAATTTCAAACACATGGTAAGCTTTTCTGTTCTTTACGTATATAAGGTACATGATATATGAAACGTAAATAAGAGAAAGTGCTTTTAACGGTCGTGGTGGGCTGGTCGTTCG]

[+] EMBL BM645903             [TGTGTACTGTTGAAAACGAGAAGATAATGTTGCGAAATGACTGAATATAAGAGGGAGAGAGAGTGTGCGTGTGTGCTGTGCGTTAGAAGAAAGAGTTGTTTACAGAGCATTAGGCGACAACACAACAACAAAACGAAGATAATTGCAACGATGATGTGTGAGAGAGTACGGAAGGGAAATGGTTAGATAAAATTCACAAAATCATTTAAACTATTTTTACATGCACCTCTCTCCCCATTTTCTCGCCCCCCACAAACGCCCCAGCTAAAGAGATGATATATGTAATATTAGCACACACGTGCGCGTGTCTCGCCTCTCCGCACGACGCTGCTGCAGCTGCTGTTCACTCTCTTTGGAAATTTGAAGACTCTTTCGAAGGAGGACACGAATCGATTGAACTAAATGAAGCGCGAATTCGTTCAAGTTACATATAGGCACACACACACACACCGGCAGAAAAGGAGAAGCAAATTTATGTGAAATCTAGAAAAGAATTTCAAACACATGGTAAGCTTTTCTGTTCTTTACGTATATAAGGTACATGATATATGAAACGTAAATAAGAGAAAGTGCTTTTAACGGTCGTGGTGGGCTGGTCGTTCG]


>consensus_8280#5 TGTGTACTGTTGAAAACGAGAAGATAATGTTGCGAAATGACTGAATATAAGAGGGAGAGA GAGTGTGCGTGTGTGCTGTGCGTTAGAAGAAAGAGTTGTTTACAGAGCATTAGGCGACAA CACAACAACAAAACGAAGATAATTGCAACGATGATGTGTGAGAGAGTACGGAAGGGAAAT GGTTAGATAAAATTCACAAAATCATTTAAACTATTTTTACATGCACCTCTCTCCCCATTT TCTCGCCCCCCACAAACGCCCCAGCTAAAGAGATGATATATGTAATATTAGCACACACGT GCGCGTGTCTCGCCTCTCCGCACGACGCTGCTGCAGCTGCTGTTCACTCTCTTTGGAAAT TTGAAGACTCTTTCGAAGGAGGACACGAATCGATTGAACTAAATGAAGCGCGAATTCGTT CAAGTTACATATAGGCACACACACACACACCGGCAGAAAAGGAGAAGCAAATTTATGTGA AATCTAGAAAAGAATTTCAAACACATGGTAAGCTTTTCTGTTCTTTACGTATATAAGGTA CATGATATATGAAACGTAAATAAGAGAAAGTGCTTTTAACGGTCGTGGTGGGCTGGTCGT TCG



consensusID : consensus_8280#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 519
fasta sequence
                              [GCCTCTTGACACAATGGCCCAGAATTTGCTGTGCTGCTCTTGATCGTGTTCGCTTTCAATTTTGCCCGATCGAGCGATCTGGTGGAGCTGACGTGCGAAACCGACCAGGACTGTGAGCCGTTTCGCAGCGCGACTGTTAACTCCACGTGCATCGAAGAGCACTGCCGGTGCACTGACCTGTCCCAGAACGGCAATGCCACCGAGTGCCGGCCGCTGGTTAACCGAGTGTCGAATCACATTGGTGGTCAATGTCCGTGCCAGGTAGCGAATTCGTTCTGCCACGAGCAAACGCGCCGGTGCATCTGCAAGGACGGGTTTCTCCCGAGCCGCGAGGACAGGAAAATCGGTACAGCTGGGTGNCGAGTGTGAGAATAACGAGCAGTGCTCGAACCACGACCACTTTGCCGACTGCCGGGNAACANGTTTNGCCAGTGTCAGGAACACTTTNGTGCTTCACGAGGGNAGCCTGCCGCTCAATCATAGCGGTTGCTNACCTCAAGAAGCTTGTGCAGCGATGAT]

[+] EMBL BX624315             [GCCTCTTGACACAATGGCCCAGAATTTGCTGTGCTGCTCTTGATCGTGTTCGCTTTCAATTTTGCCCGATCGAGCGATCTGGTGGAGCTGACGTGCGAAACCGACCAGGACTGTGAGCCGTTTCGCAGCGCGACTGTTAACTCCACGTGCATCGAAGAGCACTGCCGGTGCACTGACCTGTCCCAGAACGGCAATGCCACCGAGTGCCGGCCGCTGGTTAACCGAGTGTCGAATCACATTGGTGGTCAATGTCCGTGCCAGGTAGCGAATTCGTTCTGCCACGAGCAAACGCGCCGGTGCATCTGCAAGGACGGGTTTCTCCCGAGCCGCGAGGACAGGAAAATCGGTACAGCTGGGTGNCGAGTGTGAGAATAACGAGCAGTGCTCGAACCACGACCACTTTGCCGACTGCCGGGNAACANGTTTNGCCAGTGTCAGGAACACTTTNGTGCTTCACGAGGGNAGCCTGCCGCTCAATCATAGCGGTTGCTNACCTCAAGAAGCTTGTGCAGCGATGAT]


>consensus_8280#6 GCCTCTTGACACAATGGCCCAGAATTTGCTGTGCTGCTCTTGATCGTGTTCGCTTTCAAT TTTGCCCGATCGAGCGATCTGGTGGAGCTGACGTGCGAAACCGACCAGGACTGTGAGCCG TTTCGCAGCGCGACTGTTAACTCCACGTGCATCGAAGAGCACTGCCGGTGCACTGACCTG TCCCAGAACGGCAATGCCACCGAGTGCCGGCCGCTGGTTAACCGAGTGTCGAATCACATT GGTGGTCAATGTCCGTGCCAGGTAGCGAATTCGTTCTGCCACGAGCAAACGCGCCGGTGC ATCTGCAAGGACGGGTTTCTCCCGAGCCGCGAGGACAGGAAAATCGGTACAGCTGGGTGN CGAGTGTGAGAATAACGAGCAGTGCTCGAACCACGACCACTTTGCCGACTGCCGGGNAAC ANGTTTNGCCAGTGTCAGGAACACTTTNGTGCTTCACGAGGGNAGCCTGCCGCTCAATCA TAGCGGTTGCTNACCTCAAGAAGCTTGTGCAGCGATGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8280#0      ATCTCCAATCAAACGAACGCGAAAGTGTTCAC--GCTGCTGAACCGGGCCGGTCTGAAGA 58
consensus_8280#2      ----------------CCGCGGACGCGTGGGC--TTT-CGGGACAGGATTGCTTTCATTT 41
consensus_8280#6      ------------------------------------------------------------
consensus_8280#3      ----------------CGACCCACGCGTCCG---GCTGCTCGACGTGACCCCGCTGTCGC 41
consensus_8280#1      ----------------CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTAGG 44
consensus_8280#4      ----CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCA- 55
consensus_8280#5      -----------------------------TGTGTACTGTTGAAAACGAGAAGATAATGTT 31
                                                                                  

consensus_8280#0      CCGCGTTCGTGCGCATGATCTCCGACAACG--CGTTCCTCGCGCGCAAGTGCGAC--ATG 114
consensus_8280#2      CCGCGGCCCGGGCCTAGAAATAGGATTTGGACCGTTACGAACCCCTAAACGC-----CCG 96
consensus_8280#6      ----------------------------------------GCCTCTTGACACA----ATG 16
consensus_8280#3      TCGGTATCGAGACGGCGGGCGGCGTGATGT--CGGTGCTGATCAAGCGCAACACG--ACC 97
consensus_8280#1      CGACAAAACGCTCCGTCAGCTCCGCAAGACATCATTGCTTATCTATTATTTTTGCTGTAA 104
consensus_8280#4      -CGCGTCCGAAAAGAGAGAGAGAGAGAGGAAGGCGAATACGCACGGTGGTGCAACACACG 114
consensus_8280#5      GCGAAATGACTGAATATAAGAGGGAGAGAGAGTG-TGCGTGTGTGCTG-TGCGTT---AG 86
                                                                                  

consensus_8280#0      GTGCCGATCGAGTGGGTGACGCGCCGGGTCGCGA---CCGGTT--CGTACCTGAAGCG-C 168
consensus_8280#2      TAAACGATGGCCTCCATCCTGCGCTCCTTCGCC----TCGGCA--TTCGCCAAGAGCGGC 150
consensus_8280#6      GCCCAGAATTTGCT-GTGCTGCTCTTGATCGTGT---TCGCTT--TCAATTTTGCCCG-- 68
consensus_8280#3      ATCCCGACCAAGCAGACGCAGACGTTCACCACGTA-CTCGGACAACCAGCCGGGCGTGCT 156
consensus_8280#1      GCGCACACGCAGTAGACCAAATTCTCCGGTGTAGGGCACAACGTTCGCGAAAGGGGTATC 164
consensus_8280#4      TTGCGCGCGCGATACAAACTAATTTTAAGGGCCAAAATGAGATATGGAAGATTGGATGAT 174
consensus_8280#5      AAGAAAGAGTTGTTTACAGAGCATTAGGCGACAA--CACAACAACAAAACGAAGATAATT 144
                                                                                  

consensus_8280#0      AACCCGGGCGTGAAGGAGGGCTACCGCTTT-------GCGCCGGCCAAGGTCGAGACGTT 221
consensus_8280#2      ATGCTCGGCGCAAACGGTATTTCCCGTGCT-------GCTCCAAC---AGTAATGCTCCG 200
consensus_8280#6      -ATCGAGCGATCTGGTGGAGCTGACGTGCG-------AAACCGACCAGGACTGTGAGCCG 120
consensus_8280#3      GATCCAGGTGTT--CGAGGGCGAGCGCGCC-------ATGACGA--AGGACAACAACCTG 205
consensus_8280#1      CCTGCTACGGCACACAAGCACTAGCGGGC--------ACATGGGC-AAACCGCAGCGCTG 215
consensus_8280#4      GAGTAAGTGTGTTTGTGAAGCTCATGTTTTTTTTTTTAAATCTTTTTTGACTCTTATCTG 234
consensus_8280#5      GCAACGATGATGTGTGAGAGAGTACGGAAGGGAAAT-GGTTAGATAAAATTCACAAAATC 203
                                               *                                  

consensus_8280#0      CTTCAAGGACGACG--CGAACGAC-GATCCGCAGT-GGAGCGAGGAGCAGATTGTGTGCG 277
consensus_8280#2      CTACAAGTCCACCGAACCGGCGGCAGAATCGCGAC-CGACCGTCC-GCAAGCCGGATGCC 258
consensus_8280#6      TTTCG----CAGCG---CGACTGTTAACTCCACGT-GCATCGAAGAGCACTGCCGGTGCA 172
consensus_8280#3      CTCGGCAAGTTCGAGCTGAGCGGC--ATCCCGCCG-GCACCGCGCGGCGTGCCCCAGATC 262
consensus_8280#1      CAGTGGCCACTTTA-TTTAGCGTTTTTTTTTGTAT-GGATGTGTATGTGATGGGTCGAGC 273
consensus_8280#4      TCTTTCGAACCCCCTCCCAACACCTTCTTTGGTGTTATATCTGCTTGTTTTGGCAAAATA 294
consensus_8280#5      ATTTAAACTATTTTTACATGCACCTCTCTCCCCATTTTCTCGCCCCCCACAAACGCCCCA 263
                                          *                                       

consensus_8280#0      CCGGCTTCAAGGTGAACGGTGTGACGATCG---GCCAGGACGAGGCGGA---CGTGATCG 331
consensus_8280#2      GCCGCC-CGGTCGGAGCTGTCCGA-GTTTG---GCAAGTACGTCGCGGAGTGCATGCCCA 313
consensus_8280#6      CTGACCTGTCCCAGAACGGCAATGCCACCGAGTGCCGGCCGCTGGTTAACCGAGTGTCGA 232
consensus_8280#3      GAGGTGACGTTC--GACATCGACGCGAACGGTATCCTGAACGTGACGGCACTCGAGAAGT 320
consensus_8280#1      GAAGGCAAGATGATGATGATGATGATGATGTTAGGAAGAATTTGTTTGAATATATGATAT 333
consensus_8280#4      TTATTCATATTTTAAACATCCTCA-AATTTTGCACCAATTTTTAACCTTACCGCAGTCGG 353
consensus_8280#5      GCTAAAGAGATGATATATGTAATATTAGCACACACGTGCGCGTGTCTCGCCTCTCCGCAC 323
                                                                                  

consensus_8280#0      ATTCC-G-ACTCGTGGCGCCTCTGGCCGGCGGGCGACAAGCGCATGATGGTGGACAAGCA 389
consensus_8280#2      AGTAC-GTGCAGAAGGTGCAGCTGAC-GTCCGGCGACGAGCTGGAGGTGCTGATCGCGCC 371
consensus_8280#6      ATCAC-A--TTGGTGGTCAATGTCCGTGCCAGGTAGCGAATTCGTTCTGCCACGAGCAAA 289
consensus_8280#3      CGACC-AACAAGGAGAACAAGATCACCATCACG-AACGACAAGGGCCGCCTGAGCAAGGA 378
consensus_8280#1      TTTTTTGTGTCGTTAGTAGAAATAAAAAGTGAA-GGTAAAATCACACCGTTGACCCATTT 392
consensus_8280#4      CATCT----CATGCTCCATGTATTAGTATTTTGTGTTGTGTTTGTTTTGTTTTTTGAAAA 409
consensus_8280#5      GACGC--TGCTGCAGCTGCTGTTCACTCTCTTTGGAAATTTGAAGACTCTTTCGAAGGAG 381
                                            *                                     

consensus_8280#0      GGTGTACCGCAATCTGGCGAACGTGACGGCCGCCGATCTCGACGTGGTCAAGCGCAACTT 449
consensus_8280#2      GGAAGGCGTCGTGCCGGTG----------CTGCAGTTCCTGAAG--GACCACCACAAC-- 417
consensus_8280#6      CGCGCCGGTGCATCTGCAAGGACGGGTTTCTCCCGAGCCGCGAG--GACAGGAAAATCG- 346
consensus_8280#3      GGACATCGAGCGCATGGTGAACGAGG---CCGAGAAGTACCGCACTGAGGACGAGAAGCA 435
consensus_8280#1      TGGTGGAGCCAAGGCATTACAGGGATGTGTTGTGAGCAGGGAAGCAGCAATGAAACACAT 452
consensus_8280#4      AAAAAATATGCATTTTCAAACATGAAAATGTGTCTCTGTTGGTACAAAAAAAAAAAAAA- 468
consensus_8280#5      GACACGAATCGATTGAACTAAATGAA---GCGCGAATTCGTTCA-AGTTACATATAGGC- 436
                                                                                  

consensus_8280#0      TACCTGGGTCAGCGACGAGCTGGACAAGATGGATG-CACCGGCCAGCCACCTGGTGGTCA 508
consensus_8280#2      -GCACAGTTCGCCAAC---CTGGTCGACATTGCTGGCATGGATGTGCCGTCC--CGGCCG 471
consensus_8280#6      -GTACAGCTGGGTGNCG---AGTGTGAGAATAACG--AGCAGTGCTCGAACCA-CGACCA 399
consensus_8280#3      GAAGGAGACCATCTCCGCGAAGAACGCGCTGGA-GTCGTACTGCTTCAACATGAAGGCCA 494
consensus_8280#1      AGTAGAGTATTTTGCAGAGCAGCGCGC-ATGGGTGAGGTGGTAATTTAATTTAACG--TG 509
consensus_8280#4      ACTGTCGTTTCATCCAG----GAATGGAATGCA-GAAAAACAAAACAAACGCAATCGCCT 523
consensus_8280#5      -ACACACACACACACCG----GCAGAAAAGGAGAAGCAAATTTATGTGAAATCTAGAAAA 491
                                           *                                      

consensus_8280#0      TACTGATG-GGGTCCGCCTCGGACAAGGAG-CACTG----CGAGAAGATCGCCAAGCACT 562
consensus_8280#2      TACCGCTTCGAGATTATCTACAACATACTGTCGCTG----CGGTACAACT--CGCGCAT- 524
consensus_8280#6      CTTTGCCG-ACTGCCGGGNAACANGTTTNGCCAGTGT---CAGGAACACTTTNGTGCTTC 455
consensus_8280#3      CCATGGAGGACGACAAGCTGAAGGACAAGATCACCGACAGCGACAAGACCCTGGTGCTGG 554
consensus_8280#1      AAACTTTAAATGTTTTGCCTACTCGTGGGG-CAGTACAGCAAAACACCGCGCCTAGCGAG 568
consensus_8280#4      AGTTTTCGAACGATTCGGAATACAATTCGGACCTTGT-----ATAGTTCCTACCTGCCTC 578
consensus_8280#5      GAATTTCAAACACATGGTAAGCTTTTCTGTTCTTTACGTATATAAGGTACATGATATATG 551
                                                     *                            

consensus_8280#0      GTGCCGCGCTCGGGCTGAACG--CGGAGCTGCGCGTGACGTCCGCGCACAAGGGCACGCA 620
consensus_8280#2      ---CCGCG-TCAAGACGTACA--CCGACGAGC---TGACGCCGATCGACTCGTGCA---A 572
consensus_8280#6      ACGAGGGNAGCCTGCCGCTCAATCATAGCGGTTGCTNACCTCAAGAAGCTTGTGCA---- 511
consensus_8280#3      ACAAGTGCAACGACACGATCA-----AGTGGCT--CGATGCCAACCAGCTGGCCGACAAG 607
consensus_8280#1      AGGAAGAGAGCGAGCGAAACTAATGCAAGAAATTACAGCGCTTTTAGGGAGGTGTAC-CG 627
consensus_8280#4      CCCACACCACCAGCACCGGCTCCCCGAGGT-----TGGTGTCCCCGAGATCGAGAAAGCA 633
consensus_8280#5      AAACGTAAATAAGAGAAAGTGCTTTTAACGGTCGTGGTGGGCTGGTCGTTCG-------- 603
                                                *                        *        

consensus_8280#0      GACGACGCTGCACATGGTGAGCGAGTACGAGAGCGTGCTGAGCGAGCTGGTGTTCATCAC 680
consensus_8280#2      CGAGGTGTTCAAGGCGGCCAACTGGTACGAGCGCGAGATCTGGGACATGTACGGCGTGTT 632
consensus_8280#6      -GCGATGAT--------------------------------------------------- 519
consensus_8280#3      GAGGAGTACGAGCACCGCCAGAAGGAGCTCGAGT-CGGTGTGCAACCCGATC-------- 658
consensus_8280#1      ACAGAAAACAGTGGTGGTTAGTTTAAGTTTGGGTTGGTTTAGAATCGAAGCGAATATACA 687
consensus_8280#4      AAACGGGAGG-------------------------------------------------- 643
consensus_8280#5      ------------------------------------------------------------
                                                                                  

consensus_8280#0      GGTGGCGGGCCGGTCGAACGGGCTCGGCCCGGTACTGTCCGGCAACACCAACTATCCCGT 740
consensus_8280#2      CTTCGCGAACCATCCCGAC---CTGCGCCGCATCCTGACCGAC--TACGGGTTCGAGGTT 687
consensus_8280#6      ------------------------------------------------------------
consensus_8280#3      ------------------------------------------------------------
consensus_8280#1      AACGGAACGGAACAGCAGCAGCAGTAGTAAGAAGA------------------------- 722
consensus_8280#4      ------------------------------------------------------------
consensus_8280#5      ------------------------------------------------------------
                                                                                  

consensus_8280#0      CATCAACTGCCCGCCGGTC 759
consensus_8280#2      CATCTGCAGCGCCGCGACT 706
consensus_8280#6      -------------------
consensus_8280#3      -------------------
consensus_8280#1      -------------------
consensus_8280#4      -------------------
consensus_8280#5      -------------------
                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)