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Anopheles gambiae
cluster # 8294 cluster # 8294       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8294#0 length = 1395 sequences # 6  
consensus_8294#1 length = 678 sequences # 1  
consensus_8294#2 length = 671 sequences # 1  
consensus_8294#3 length = 549 sequences # 1  

consensusID : consensus_8294#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1395
fasta sequence
                              [CCGCCCACGCGTCCGGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTG--CACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACATAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTCCACGAACCACCT-GGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCCGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCAT-CCCCAAACACACACAAACACACACACACATTATAATAAATCCAATATAAAGAAG-AAAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAAGCAAAAC---AAAAAAAACCCAGATTAAAGCATAAGCATTAATACGAAACGAATATAAGTAGTACGACGGTTAAGGTGAAGTTTTAGCACCGGACGAGCACGCGGTAGGGAATAGCAAAAGGAAAAGAAAAAGTGGTAGGAGAAC-GCTA---GCTAG---CCCCCACTTT--CCCCCCACCC-GCCCCATAGTGTAACACGAGACACGAAGCAGACCAGTAAAGCGGGATTCCCGGTTCCGCCGGAACCGCGCCCGCTCCAAATCCCACCTGCACAGGAGAGCGGTGGCGCGTGCGGCAAGCAGTGCGGAACGCTCTGGTGCCCACTGTGAGCGGATGGAATCGGAGTGGGTGGTGGTGGTGGGCGGTGCGAAGTGGCCAGCCAGACAGACAGTCAGACAGACAGGCACAAAGTGCGCAATGTAGGGTCGTCGTCGTCGTCGTCGCCCCCCGTATATGTGTACCGGCCCGAGAGCGCGCGCCCGAGTTTAAAACATCAAAAAACATTAAAAAAACAAACAAACAACGGAGGCATCCTTGCTTTGGCCACTGGCGCTTAATAAACACTTTTTTTTTTGGACGGAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCA]

[+] EMBL BM642973             [CCGCCCACGCGTCCGGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTG  CACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACATAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAAC  CACACACACACACAATAACACTCCACGAACCACCTGGGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCCGCCACTACAT  AGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCATCCCCCACACACACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM612608             [                                                                      ccgCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTTAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCTAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTCCACGAACCACCT GGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCAT CCCCAAACACACACAAACACACACACACATTATAATAAATCCCATATAAAGAAG AAAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM652526             [                                                                                                                                                                                             CCGCTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTG  CACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACATAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAAC  CACACACACACACAATAACACTCCACGAACCACCT GGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCCGCCACTACAT  AGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCAT CCC        CAC  ACACACACACACATTATAATAAATCCAATATAAAGAAGAAAAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAAGCAAAAC    AAAAAAACCCAGATTAAAGCATAAGCATTAATACGAAACGAATATAAGTAGTACGACGGTTAAGGTGAAGTTTTAGCACCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM627005             [                                                                                                                                                                                                                                                                                                                ccgCGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCTAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTCCACGAACCACCT GGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCAT CCCCAAACACACACAAACACACACACACATTATAATAAATCCAATATAAAGAAGAAAAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAAGCAAAAC   AAAAAAAACCCAGATTAAAGCATAAGCATTAATACGAAACGAATATAAGTAGTACGACGGTTAAGGTGAAGTTTTAGCACCGGACGAGCACGCGGTAGGGAATAGCAAAAGGAAAAGAAAAAGTGGTAGGAGAAC GCT    GTTAGGCCCCCCCACTTTTCCCCCCCACCCGGCCCCATAGTGTAACACGAGACACGAAGCAGACCAGTAAAGCGGGATTCCCG                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS095NJ             [                                                                                                                                                                                                                                                                                                                                   tactggTATATTTACAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTG      CACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACATAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAGTAACACTCCACGAACCACCT GGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCCGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCAT CCCCACACACACACAA  ACACACACACATTATAATAAATCCAATATAAAGAAG  AAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAAGCAAAACAAAAAAAAAAAACCAGATTAAAGCATAAGCATTAATACGAAACGAATATAAGTAGTACGACGGTTAAGGTGAAGTTTTAGCACCGGACGAGCACGCGGTAGGGAATAGCAAAAGGAAAAGAAAAAGTGGTAGGAGAAC GCTA   GCTAG   CCCCCACTTT  CCCCCCACCC GCCCCATAGTGTAACACGAGACACGAAGCAGACCAGTAAAGCGGGATTCCCGGTTCCGCCGGAACCGCGCCCGCTCCAAATCCCACCTGCACAGGAGAGCGGTGGCGCGTGCGGCAAGCAGTGCGGAACGCTCTGGTGCCCACTGTGAGCGGATGGAATCGGAGTGGGTGGTGGTGGTGGGCGGTGCGAAGTGGCCAGCCAGACAGACAGTCAGACAGACAGGCACAAAGTGCGCAATGTAGGGTCGTCGTCGTCGTCGTCGCCCCCCGTATATGTGTACCGGCCCGAGAGCGCGCGCCCGAGTTTAAAACATCAAAAAACATTAAAAAAACAAACAAACAACGGAGGCATCCTTGCTTTGGCCACTGGCGCTTAATAAACACTTTTTTTTTTGGACGGAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCA]
[+] EMBL BM583576             [                                                                                                                                                                                                                                                                                                                                                                                                                                ccgCACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCTAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTCCACGAACCACCT GGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCAT CCCCAAACACACACAAACACACACACACATTATAATAAATCCAATATAAAGAAG AAAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAAGCAAAAC   AAAAAAAACCCAGATTAAAGCATAAGCATTAATACGAAACGAATATAAGTAGTACGACGGTTAAGGTGAAGTTTTAGCACCGGACGAGCACGCGGTAGGGAATAGCAAAAGGAAAAGAAAAAGTGGTAGGAGAACGGCTACAGGGGCC   CCCCCACTTTTCCCCCCCACCC GCCCCATAGTGTAACACGAGACACGAAGCAGACCAGTAAAGCGGGATTCCCGGTTCCGCCGGAACCGCGCCCGCTCCAAATCCCACCTGCACAGGAGAGCGGTGGCGCGTGCGGCAA                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8294#0 CCGCCCACGCGTCCGGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAG ACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTC GTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTG CGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATC TTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAG CAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACC AACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACAC GTACACAATACACGCACACGGAAACACATGCATACTCTATACATAAACAACCATACACAC ACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTC CACGAACCACCTGGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCCGCCACTA CATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACTACAACAACACCATCC CCAAACACACACAAACACACACACACATTATAATAAATCCAATATAAAGAAGAAAAAAAC CCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCTAGAAGCGCAAAGCAAAACA AAAAAAACCCAGATTAAAGCATAAGCATTAATACGAAACGAATATAAGTAGTACGACGGT TAAGGTGAAGTTTTAGCACCGGACGAGCACGCGGTAGGGAATAGCAAAAGGAAAAGAAAA AGTGGTAGGAGAACGCTAGCTAGCCCCCACTTTCCCCCCACCCGCCCCATAGTGTAACAC GAGACACGAAGCAGACCAGTAAAGCGGGATTCCCGGTTCCGCCGGAACCGCGCCCGCTCC AAATCCCACCTGCACAGGAGAGCGGTGGCGCGTGCGGCAAGCAGTGCGGAACGCTCTGGT GCCCACTGTGAGCGGATGGAATCGGAGTGGGTGGTGGTGGTGGGCGGTGCGAAGTGGCCA GCCAGACAGACAGTCAGACAGACAGGCACAAAGTGCGCAATGTAGGGTCGTCGTCGTCGT CGTCGCCCCCCGTATATGTGTACCGGCCCGAGAGCGCGCGCCCGAGTTTAAAACATCAAA AAACATTAAAAAAACAAACAAACAACGGAGGCATCCTTGCTTTGGCCACTGGCGCTTAAT AAACACTTTTTTTTTTGGACGGAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAGGCCA



consensusID : consensus_8294#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence
                              [CCGCCCACGCGTCCGCCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTTAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCTAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTCCACGAACCACCTGGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACCACAACAACACAAACCCCATC]

[+] EMBL BM591242             [CCGCCCACGCGTCCGCCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTTAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACACAAACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCTAAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACACACAATAACACTCCACGAACCACCTGGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCGAACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACCACAACAACACAAACCCCATC]


>consensus_8294#1 CCGCCCACGCGTCCGCCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGA TCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTTA ACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGG ACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCA GCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCG GCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATT AAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACACAAACA AACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCTAAA CAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACACACA CACAATAACACTCCACGAACCACCTGGAGCCTGGTCGGATGAAGGGAGAAAGATTGTGCG AACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAACAACCAC AACAACACAAACCCCATC



consensusID : consensus_8294#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence
                              [CCGCGGACGCGTGGGTGGTAACTTCGGCAACATGTTTGAACGAGAATACCTAAGCGAACTGCTAAGACACCTCGGAACTGGATCAAGGGATAATGCGCAGGGTCCAAATAACATCAACATGAAAGGAAAGACAGCGAATAAAAAGAAAACATTCAGAGGAGGACCTAGACCGAATAAATGAACTTTTTTCTTCAATTCAGTTGACACTGTAAATAGAGAAACTTTTTGGATCCTAAAATGCCTCTGCGTGTAATTTCAAAGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATTACACAAGATATCCGGAAACAGTGGATCCACGAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCCGGAAACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGGTATCTGATTTCATGAGTTTCAACTTAGGTTCTGGATGAATTTATCCGGGAAGATCTGTTTGTTGTGGA]

[+] EMBL BM579429             [CCGCGGACGCGTGGGTGGTAACTTCGGCAACATGTTTGAACGAGAATACCTAAGCGAACTGCTAAGACACCTCGGAACTGGATCAAGGGATAATGCGCAGGGTCCAAATAACATCAACATGAAAGGAAAGACAGCGAATAAAAAGAAAACATTCAGAGGAGGACCTAGACCGAATAAATGAACTTTTTTCTTCAATTCAGTTGACACTGTAAATAGAGAAACTTTTTGGATCCTAAAATGCCTCTGCGTGTAATTTCAAAGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATTACACAAGATATCCGGAAACAGTGGATCCACGAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCCGGAAACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGGTATCTGATTTCATGAGTTTCAACTTAGGTTCTGGATGAATTTATCCGGGAAGATCTGTTTGTTGTGGA]


>consensus_8294#2 CCGCGGACGCGTGGGTGGTAACTTCGGCAACATGTTTGAACGAGAATACCTAAGCGAACT GCTAAGACACCTCGGAACTGGATCAAGGGATAATGCGCAGGGTCCAAATAACATCAACAT GAAAGGAAAGACAGCGAATAAAAAGAAAACATTCAGAGGAGGACCTAGACCGAATAAATG AACTTTTTTCTTCAATTCAGTTGACACTGTAAATAGAGAAACTTTTTGGATCCTAAAATG CCTCTGCGTGTAATTTCAAAGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGA TCCACCAACTGAAAAGGATTTCCGAAGGATTACACAAGATATCCGGAAACAGTGGATCCA CGAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAA CTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGA AAAGGATTTCCGAAGGATCCGGAAACACAAGACATCCGGAAACAGTGGATCCACCAACTG AAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAA GGGTATCTGATTTCATGAGTTTCAACTTAGGTTCTGGATGAATTTATCCGGGAAGATCTG TTTGTTGTGGA



consensusID : consensus_8294#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence
                              [CCGGGCGGCAATGGTAACTTCGGCAACATGTTTGAACGAGAATACCTAAGCGAACTGCTAAGACTGCTCGGAACTGGATCAAGGGATAATGCGCAGGGTCCAAATAACATCAACATGAAAGGAAAGACAGCGAATAAAAAGAAAACATTCAGAGGAGGACCTAGACCGAATAAATGAACTTTTTTCTTCAATTCAGTTGACACTGTAAATAGAGAAACTTTTTGGATCCTAAAATGCCTCTGCGTGTAATTTCAAAGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCCGGAAACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCG]

[+] EMBL BM591143             [CCGGGCGGCAATGGTAACTTCGGCAACATGTTTGAACGAGAATACCTAAGCGAACTGCTAAGACTGCTCGGAACTGGATCAAGGGATAATGCGCAGGGTCCAAATAACATCAACATGAAAGGAAAGACAGCGAATAAAAAGAAAACATTCAGAGGAGGACCTAGACCGAATAAATGAACTTTTTTCTTCAATTCAGTTGACACTGTAAATAGAGAAACTTTTTGGATCCTAAAATGCCTCTGCGTGTAATTTCAAAGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGAAGGATCCGGAAACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCG]


>consensus_8294#3 CCGGGCGGCAATGGTAACTTCGGCAACATGTTTGAACGAGAATACCTAAGCGAACTGCTA AGACTGCTCGGAACTGGATCAAGGGATAATGCGCAGGGTCCAAATAACATCAACATGAAA GGAAAGACAGCGAATAAAAAGAAAACATTCAGAGGAGGACCTAGACCGAATAAATGAACT TTTTTCTTCAATTCAGTTGACACTGTAAATAGAGAAACTTTTTGGATCCTAAAATGCCTC TGCGTGTAATTTCAAAGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCA CCAACTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAA CTGAAAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGA AAAGGATTTCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAG GATTTCCGAAGGATCCGGAAACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAA GGATTTCCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8294#2      CCGCGGACGCGTGGGTGGTA------ACTTCGG-CAACATGTTTGAACGAGAATACCTAA 53
consensus_8294#3      --CCGG--GCGGCAATGGTA------ACTTCGG-CAACATGTTTGAACGAGAATACCTAA 49
consensus_8294#0      CCGCCCACGCGTCCG-----------GTGTCGATCGTCGTCGTACAGTGGGCCGATTTGA 49
consensus_8294#1      CCGCCCACGCGTCCGCCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGA 60
                         *    ***                  ***  *  * *  *  *  * *   *  * *

consensus_8294#2      GCGAACTGCTAAGACACCTCGGAACTGGAT-------CAAGGGATAATGCGCAGGGTCCA 106
consensus_8294#3      GCGAACTGCTAAGACTGCTCGGAACTGGAT-------CAAGGGATAATGCGCAGGGTCCA 102
consensus_8294#0      TC-ATCTG-TAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCT 107
consensus_8294#1      TC-ATCTG-TAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCT 118
                       * * *** ******    ** **** ***       ** ** ** *    * *** ** 

consensus_8294#2      -AATAACATCAACATGAAAGGAAAGACAGCGAAT-------------AAAAAGAAAACAT 152
consensus_8294#3      -AATAACATCAACATGAAAGGAAAGACAGCGAAT-------------AAAAAGAAAACAT 148
consensus_8294#0      CAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCAT 167
consensus_8294#1      TAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCAT 178
                       **   *     * **   * ** *  *  *  *             * *       ***

consensus_8294#2      TCAGAGGAGGACCTAGACCGAATAAATGAACTTTTTTCTTCAATT--CAG-TTGACACTG 209
consensus_8294#3      TCAGAGGAGGACCTAGACCGAATAAATGAACTTTTTTCTTCAATT--CAG-TTGACACTG 205
consensus_8294#0      GGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTT 227
consensus_8294#1      GGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTT 238
                        * * * *       *   *   * **** **  **       *  *** ** **  * 

consensus_8294#2      TAAATAGAGAAACTTTTTGGATCCTAAAATGCCTCTGCGTGTAATTTCAAAGATTTCCGA 269
consensus_8294#3      TAAATAGAGAAACTTTTTGGATCCTAAAATGCCTCTGCGTGTAATTTCAAAGATTTCCGA 265
consensus_8294#0      CAGCTTGTCCATCTTCGTGTATGACGAAATTCGTC-GCTTCTACTTGAGACGCAATCCAG 286
consensus_8294#1      CAGCTTGTCCATCTTCGTGTATGACGAAATTCGTC-GCTTCTACTTGAGACGCAATCCAG 297
                       *  * *   * ***  ** **    **** * ** ** * ** **   * *   ***  

consensus_8294#2      AGGATCACACAAGACATCCG--GAAACAGTGGATCCACCAACTGA------AAAGGATTT 321
consensus_8294#3      AGGATCACACAAGACATCCG--GAAACAGTGGATCCACCAACTGA------AAAGGATTT 317
consensus_8294#0      GCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTA 346
consensus_8294#1      GCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTA 357
                        *       *   **      * *  * * * ** ** ** * *      *** **** 

consensus_8294#2      CCGAAGGATTACACAAGATATCCGGAAACAGTGGATCCACGAACTGAAAAGGATTTCCGA 381
consensus_8294#3      CCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTCCGA 377
consensus_8294#0      ATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACA--A 404
consensus_8294#1      ATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACACAA 417
                         **     *  *** * *  *  *  *    *  **    **  * *   *      *

consensus_8294#2      AGGATCACACAAG-ACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTC-----C 435
consensus_8294#3      AGGATCACACAAG-ACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATTTC-----C 431
consensus_8294#0      ACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACAT 464
consensus_8294#1      ACAAACACACAGACACGTACACAATACACGCACACGGAAACACATGCATACTCTATACCT 477
                      *  * ******   ** * *  **     * *  *   ***  *     * *        

consensus_8294#2      GAAGGATCACACA-AGACATCCGGAAACAGTG-GATCCACCAACTGAAAAGGATTTCCGA 493
consensus_8294#3      GAAGGATCACACA-AGACATCCGGAAACAGTG-GATCCACCAACTGAAAAGGATTTCCGA 489
consensus_8294#0      AAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACAC 524
consensus_8294#1      AAACAACCATACACACACATACGCATTATGTGCAATCCCAGAAACACAAACCACACACAC 537
                       **  * ** *** * **** ** *    ***  ****   **    ***  *    *  

consensus_8294#2      AGGATCCGGAAA----CACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATT 549
consensus_8294#3      AGGATCCGGAAA----CACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGATT 545
consensus_8294#0      ACACACAATAACACTCCACGAACCACCTGGAGCC--TGGTCGGATGAAGGGAGAAAGATT 582
consensus_8294#1      ACACACAATAACACTCCACGAACCACCTGGAGCC--TGGTCGGATGAAGGGAGAAAGATT 595
                      *    *   **     *** *  ** * ***  *  ***    *  **  ** ** ****

consensus_8294#2      -TCCGAAGGATCACACAAGACATCCGGAAACAGTGGATCCACCAACTGAAAAGGGTATCT 608
consensus_8294#3      -TCCG------------------------------------------------------- 549
consensus_8294#0      GTGCGAACGCCGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAAC- 641
consensus_8294#1      GTGCGAACGCTGCCACTACATAGAGAGAGAGAGCATGAGCGATTTAGTAACGATGCAAC- 654
                       * **                                                       

consensus_8294#2      GATTTCATGAGTTTCAACTTAGGTTCTGGATGAATTTATCCGGGAAGATCTGTTTGTTGT 668
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      AACTACAACAACACCATCCCCAAACACACACAAACACACACACACATTATAATAAATCCA 701
consensus_8294#1      AACCACAACAACACAAACCCCATC------------------------------------ 678
                                                                                  

consensus_8294#2      GGA--------------------------------------------------------- 671
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      ATATAAAGAAGAAAAAAACCCCGACCGTGGGGGCCGAGTTTGCGAGCAAAAAACCAAGCT 761
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      AGAAGCGCAAAGCAAAACAAAAAAAACCCAGATTAAAGCATAAGCATTAATACGAAACGA 821
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      ATATAAGTAGTACGACGGTTAAGGTGAAGTTTTAGCACCGGACGAGCACGCGGTAGGGAA 881
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      TAGCAAAAGGAAAAGAAAAAGTGGTAGGAGAACGCTAGCTAGCCCCCACTTTCCCCCCAC 941
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      CCGCCCCATAGTGTAACACGAGACACGAAGCAGACCAGTAAAGCGGGATTCCCGGTTCCG 1001
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      CCGGAACCGCGCCCGCTCCAAATCCCACCTGCACAGGAGAGCGGTGGCGCGTGCGGCAAG 1061
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      CAGTGCGGAACGCTCTGGTGCCCACTGTGAGCGGATGGAATCGGAGTGGGTGGTGGTGGT 1121
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      GGGCGGTGCGAAGTGGCCAGCCAGACAGACAGTCAGACAGACAGGCACAAAGTGCGCAAT 1181
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      GTAGGGTCGTCGTCGTCGTCGTCGCCCCCCGTATATGTGTACCGGCCCGAGAGCGCGCGC 1241
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      CCGAGTTTAAAACATCAAAAAACATTAAAAAAACAAACAAACAACGGAGGCATCCTTGCT 1301
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ------------------------------------------------------------
consensus_8294#3      ------------------------------------------------------------
consensus_8294#0      TTGGCCACTGGCGCTTAATAAACACTTTTTTTTTTGGACGGAAACACAAAAAAAAAAAAA 1361
consensus_8294#1      ------------------------------------------------------------
                                                                                  

consensus_8294#2      ----------------------------------
consensus_8294#3      ----------------------------------
consensus_8294#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCA 1395
consensus_8294#1      ----------------------------------
                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)