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Anopheles gambiae
cluster # 8297 cluster # 8297       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8297#0 length = 999 sequences # 3  
consensus_8297#1 length = 782 sequences # 2  
consensus_8297#2 length = 678 sequences # 2  
consensus_8297#3 length = 661 sequences # 1  
consensus_8297#4 length = 650 sequences # 1  

consensusID : consensus_8297#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 999
fasta sequence
                              [CCGGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGACTAAATCAATCAGCTGCAGTCAGTTGGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTAAATAGGGCGAGATTGGGCCGTCTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAGAAAGTTGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTCCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCACCGATGGGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTCACCTCGTCCCGCTCCGGTGTTGGTGTTGAATGCAGACCTGGACCTGAACACGATCGGGGCGGAGTACGAACGATCGGAGACGAGTATATTAAAGCCGATCCTGATAGAAAACACCAACCAGCATGCGATACTTACGTCCCCAGCGAAGCGAGCCAAGAC]

[+] EMBL BM585196             [CCGGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGACTAAATCAATCAGCTGCAGTCAGTTGGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTAAATAGGGCGAGATTGGGCCGTCTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAGAAAGTTGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTCCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCACCGATGGGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AF488801             [                                                                                                                                                                                                                                                                                     ATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTCCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCACCGATGGGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTCACCTCGTCCCGCTCCGGTGTTGGTGTTGAATGCAGACCTGGACCTGAACACGATCGGGGCGGAGTACGAACGATCGGAGACGAGTATATTAAAGCCGATCCTGATAGAAAACACCAACCAGCATGCGATACTTACGTCCCCAGCGAAGCGAGCCAAGAC]
[+] EMBL BX615166             [                                                                                                                                                                                                                                                                                                                                                                                                          TGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCACCGATGGGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTTATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTCACCTCGTCCCGCTCCGGTGTTGGTGTTGAATGCAGACCTGGACCTGAACACGATCGGGGCGGAGTACGAACGATCGGAGACGAGTATATTAAAGCCGATCCTGATAGAAAACACCAACCAGCATGCGATAC                            ]


>consensus_8297#0 CCGGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAA GATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGACTAAATCAATCAGCTGCAGTCA GTTGGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTAAATAGGGCG AGATTGGGCCGTCTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAGAAAGT TGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGC CAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGAC GTTCCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAA GTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCACCGATG GGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGAC GGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGA GAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTA CGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAG CCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCC GCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTC ACCTCGTCCCGCTCCGGTGTTGGTGTTGAATGCAGACCTGGACCTGAACACGATCGGGGC GGAGTACGAACGATCGGAGACGAGTATATTAAAGCCGATCCTGATAGAAAACACCAACCA GCATGCGATACTTACGTCCCCAGCGAAGCGAGCCAAGAC



consensusID : consensus_8297#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 782
fasta sequence
                              [CCGGTGTCGACGCGTTTCGTATCGTTTGTCCGTGGCGTGTGTGTGTCCCCCGTTTTTACCTTTGTTTGACTTAGCCTACTTGTAAAGTGTGGTGCTTGTAAAGAGTGTATTTGTTTCAGTTTCACTTGTACCATTGGTTTGGTACAATTTCATTATATTCACCAAATTTGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTCACCTCGTCCCGCTTCCGGTGT]

[+] EMBL BM637282             [CCGGTGTCGACGCGTTTCGTATCGTTTGTCCGTGGCGTGTGTGTGTCCCCCGTTTTTACCTTTGTTTGACTTAGCCTACTTGTAAAGTGTGGTGCTTGTAAAGAGTGTATTTGTTTCAGTTTCACTTGTACCATTGGTTTGGTACAATTTCATTATATTCACCAAATTTGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCA                                                                                                               ]
[+] EMBL BM578636             [                                                                                         ccGTGCTTGTAAAGAGTGTATTTGTTTCAGTTTCACTTGTACCATTTGTTTGGTACAATTTCATTATATTCACCAAATTTGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTCACCTCGTCCCGCTTCCGGTGT]


>consensus_8297#1 CCGGTGTCGACGCGTTTCGTATCGTTTGTCCGTGGCGTGTGTGTGTCCCCCGTTTTTACC TTTGTTTGACTTAGCCTACTTGTAAAGTGTGGTGCTTGTAAAGAGTGTATTTGTTTCAGT TTCACTTGTACCATTGGTTTGGTACAATTTCATTATATTCACCAAATTTGACGACGCAAC ATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTC ACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAG AAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGC GTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACC TACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTG ATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGG TCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAAC ATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAA CGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGCGTTCCGCTCGAGTACCTCAAGGAG CTGCATGAGCTGCACGAAAACTGGCTCATTCATGGCGCCTCACCTCGTCCCGCTTCCGGT GT



consensusID : consensus_8297#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 678
fasta sequence
                              [CCGGTTTACGATGTGCGCCGTATTGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGC]

[+] EMBL BM581243             [CCGGTTTACGATGTGCGCCGTATTGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGGTGTACGAACGGATGAAGC]
[+] EMBL BM619741             [              cCGCCGTATTGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACCCGCTTGATAAACGACTGTTTCATGAATCTTCCTGTAATTGACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTCCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCAGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCACCGATGGGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTC                                                                                                                                                                                   ]


>consensus_8297#2 CCGGTTTACGATGTGCGCCGTATTGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACC CGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGC TTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGAC GACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGA AGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACC ACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACT GTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGT TTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGG TCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGG CCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCT GCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCGAAGTGG TGTACGAACGGATGAAGC



consensusID : consensus_8297#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 661
fasta sequence
                              [CCGCCCACGCGTCCGATTCTGGACTGCGGGTGTAGCTAAATTCGATGTGTAGAATAACCGCGTGTTGTGTTAATTGGAAATTTGCCTAAATTTATCCCTTGTAGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTGAATAGGGCGAGATTGGGCCGTCTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAGAAAGTTGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATT]

[+] EMBL BM579120             [CCGCCCACGCGTCCGATTCTGGACTGCGGGTGTAGCTAAATTCGATGTGTAGAATAACCGCGTGTTGTGTTAATTGGAAATTTGCCTAAATTTATCCCTTGTAGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTGAATAGGGCGAGATTGGGCCGTCTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAGAAAGTTGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATT]


>consensus_8297#3 CCGCCCACGCGTCCGATTCTGGACTGCGGGTGTAGCTAAATTCGATGTGTAGAATAACCG CGTGTTGTGTTAATTGGAAATTTGCCTAAATTTATCCCTTGTAGTTACTGTGGCAGGCGC ATTGGCAGTTAACCGCGCAATAGTGAGCTGAATAGGGCGAGATTGGGCCGTCTGTGCACA CAGTATTGTGACGAAACAATTGGCTGCTCATGAGAAAGTTGTACCAGGACGACGCAACAT TCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCAC CGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAA GTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGT CAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTA CGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGAT GGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTC GCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACAT T



consensusID : consensus_8297#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence
                              [CCGCCCACGCGTCCGGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCCGAAGT]

[+] EMBL BM585943             [CCGCCCACGCGTCCGGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCCGAAGT]


>consensus_8297#4 CCGCCCACGCGTCCGGTTTTATCGTGTTCTTTTCGCAAAAACTATCGTACCCGCTTGATA AACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCCTAAGATGTTGCTTAAAACAG TCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAGTCAGTTGGGACGACGCAACA TTCACAACATGCCTCCGATAGCGAGCGAAAAGTTAGGCGCCAGCGGCAAGAAGCCGTTCA CCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAGACGACGTTTCTGAACCACTTCCAGA AGTTTAACGACATCTGTCTGCTGACGGAGCCGGTGGAGAAGTGGCGCAACTGTGGCGGCG TCAATCTCCTCGATCTGATGTACAAAGAGTCGCACCGATGGGCGATGCCGTTTCAGACCT ACGTTACGCTCACGATGCTCGACATGCACACCTGCCAGACGGACAAATCGGTCAAGCTGA TGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTCGTGGAGAGCATGCTGGCCTCCGGGT CGCTGCATCAAGGCATGTACAATGTGCTGCAGGAATGGTACGACTTCATCTGCTGCAACA TTCACATACAGGCGGACCTAATCGTGTACCTTCAAACGAGCCCCCGAAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8297#0      CCGGTACCCGCTTGATAAACAACTGTTTCATGAATCTTCCTGTGATTTAC---CGCATCC 57
consensus_8297#3      ----------------------CCGCC-CACGCGTCCGATTCTGGACTGCGGGTGTAGCT 37
consensus_8297#2      ------------------------------------------------------------
consensus_8297#4      ------------------------------------------------------------
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGACTAAATCAATCAGCTGCAG 117
consensus_8297#3      AAATTCGATGTGTAGAATAA-CCGCGTGTTGTGTTAATTGGA-AATTTGCCTAAATTTAT 95
consensus_8297#2      ------CCGGTTTACGATGTGCGCCGTATTGTTTTATCGTGTTCTTTTCGCAAAAACTAT 54
consensus_8297#4      --------------CCGCCCACGC-GTCCGGTTTTATCGTGTTCTTTTCGCAAAAACTAT 45
consensus_8297#1      -----------CCGGTGTCGAC-GCGTTTCGTATCGTTTG--TCCGTGGCGTGTGTGTGT 46
                                           *    *   *               *             

consensus_8297#0      TCAGT-TGGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTAAATAG 176
consensus_8297#3      CCCTTGTAGTTACTGTGGCAGGCGCATTGGCAGTTAACCGCGCAATAGTGAGCTGAATAG 155
consensus_8297#2      C----GTACCCGCT-TGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCC 109
consensus_8297#4      C----GTACCCGCT-TGATAAACAACTGTTTCATGAATCTTCCTGTGATTTACCGCATCC 100
consensus_8297#1      CCCCCGTTTTTACCTTTGTT--TGACTTAGC--CTACTTGTAAAGTGTGGTGCTTGTAAA 102
                            *     *  *          *        *         *      *       

consensus_8297#0      GGCGAGATTGGGCCGT-CTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAG 235
consensus_8297#3      GGCGAGATTGGGCCGT-CTGTGCACACAGTATTGTGACGAAACAATTGGCTGCTCATGAG 214
consensus_8297#2      TAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAG 169
consensus_8297#4      TAAGATGTTGCTTAAAACAGTCCGCCTAATGCTAAGACCGGCTAAATCAATCAGCTGCAG 160
consensus_8297#1      GAGTGTATTTGTTTCAGTTTCACTTGTACCATTGGTTTGGTACAATTTCATTATATTCAC 162
                             **             *    *    *          ** *   *       * 

consensus_8297#0      AAAGTTGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTA 295
consensus_8297#3      AAAGTTGTACCAGGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTA 274
consensus_8297#2      TCAGTTG-----GGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTA 224
consensus_8297#4      TCAGTTG-----GGACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTA 215
consensus_8297#1      CAAATTT------GACGACGCAACATTCACAACATGCCTCCGATAGCGAGCGAAAAGTTA 216
                        * **       ***********************************************

consensus_8297#0      GGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAG 355
consensus_8297#3      GGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAG 334
consensus_8297#2      GGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAG 284
consensus_8297#4      GGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAG 275
consensus_8297#1      GGCGCCAGCGGCAAGAAGCCGTTCACCGTGTTCGTCGAGGGCAACATCGGCAGTGGCAAG 276
                      ************************************************************

consensus_8297#0      ACGACGTTCCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTG 415
consensus_8297#3      ACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTG 394
consensus_8297#2      ACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTG 344
consensus_8297#4      ACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTG 335
consensus_8297#1      ACGACGTTTCTGAACCACTTCCAGAAGTTTAACGACATCTGTCTGCTGACGGAGCCGGTG 336
                      ******** ***************************************************

consensus_8297#0      GAGAAGTGGCGCAACTGTGGCGGCGTCAATCTGCTCGATCTGATGTACAAGGAGTCGCAC 475
consensus_8297#3      GAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCAC 454
consensus_8297#2      GAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCAC 404
consensus_8297#4      GAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCAC 395
consensus_8297#1      GAGAAGTGGCGCAACTGTGGCGGCGTCAATCTCCTCGATCTGATGTACAAAGAGTCGCAC 396
                      ******************************** ***************** *********

consensus_8297#0      CGATGGGCGATGCCATTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGC 535
consensus_8297#3      CGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGC 514
consensus_8297#2      CGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGC 464
consensus_8297#4      CGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGC 455
consensus_8297#1      CGATGGGCGATGCCGTTTCAGACCTACGTTACGCTCACGATGCTCGACATGCACACCTGC 456
                      ************** *********************************************

consensus_8297#0      CAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTC 595
consensus_8297#3      CAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTC 574
consensus_8297#2      CAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTC 524
consensus_8297#4      CAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTC 515
consensus_8297#1      CAGACGGACAAATCGGTCAAGCTGATGGAACGGTCGCTGTTCAGTGCAAGAAACTGCTTC 516
                      ************************************************************

consensus_8297#0      GTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAA 655
consensus_8297#3      GTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAA 634
consensus_8297#2      GTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAA 584
consensus_8297#4      GTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAA 575
consensus_8297#1      GTGGAGAGCATGCTGGCCTCCGGGTCGCTGCATCAAGGCATGTACAATGTGCTGCAGGAA 576
                      ************************************************************

consensus_8297#0      TGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAA 715
consensus_8297#3      TGGTACGACTTCATCTGCTGCAACATT--------------------------------- 661
consensus_8297#2      TGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAA 644
consensus_8297#4      TGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAA 635
consensus_8297#1      TGGTACGACTTCATCTGCTGCAACATTCACATACAGGCGGACCTAATCGTGTACCTTCAA 636
                      ***************************                                 

consensus_8297#0      ACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGC 775
consensus_8297#3      ------------------------------------------------------------
consensus_8297#2      ACGAGCCCC-GAAGTGGTGTACGAACGGATGAAGC------------------------- 678
consensus_8297#4      ACGAGCCCCCGAAGT--------------------------------------------- 650
consensus_8297#1      ACGAGCCCCGAAGTGGTGTACGAACGGATGAAGCAGCGGGCCCGCTCGGAAGAGAGTTGC 696
                                                                                  

consensus_8297#0      GTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGC 835
consensus_8297#3      ------------------------------------------------------------
consensus_8297#2      ------------------------------------------------------------
consensus_8297#4      ------------------------------------------------------------
consensus_8297#1      GTTCCGCTCGAGTACCTCAAGGAGCTGCATGAGCTGCACGAAAACTGGCTCATTCATGGC 756
                                                                                  

consensus_8297#0      GCCTCACCTCGTCCCGCTCCGGTGTTGGTGTTGAATGCAGACCTGGACCTGAACACGATC 895
consensus_8297#3      ------------------------------------------------------------
consensus_8297#2      ------------------------------------------------------------
consensus_8297#4      ------------------------------------------------------------
consensus_8297#1      GCCTCACCTCGTCCCGCTTCCGGTGT---------------------------------- 782
                                                                                  

consensus_8297#0      GGGGCGGAGTACGAACGATCGGAGACGAGTATATTAAAGCCGATCCTGATAGAAAACACC 955
consensus_8297#3      ------------------------------------------------------------
consensus_8297#2      ------------------------------------------------------------
consensus_8297#4      ------------------------------------------------------------
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      AACCAGCATGCGATACTTACGTCCCCAGCGAAGCGAGCCAAGAC 999
consensus_8297#3      --------------------------------------------
consensus_8297#2      --------------------------------------------
consensus_8297#4      --------------------------------------------
consensus_8297#1      --------------------------------------------
                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)