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Anopheles gambiae
cluster # 8309 cluster # 8309       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8309#0 length = 1416 sequences # 9  
consensus_8309#1 length = 851 sequences # 1  

consensusID : consensus_8309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1416
fasta sequence
                              [TATTTTGTTTCAAAAATGTTACAAATTCATAATATCGTTGTAAAAATCCTGTATTCTCCTGGCCAACAGCTTTCGATGATTAAATAAATTTGGCCCTCCACCACAACAGTTTGCCGATCGCTGATATTCACTGTTAACGATCGTTTGTTTAACGAAGGT-CTAGGACTAGTCCTTAAAATTAACAAATGAACTCAATGCATTCGCGATGCCAATGTCCAGCAA-TTTTAAAGACTGTTAATT-TTTAACCATTTCTTT-CGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATGGTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGGAAAACTGATCGGGGCTGCTATCGGTGTTAATCCCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTCCACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGATATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCATTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAGTCGGTGTCGGCGTTTCAAGACTCTCGGTGTGTGTATTTGAAATTTTTAGTTTTTTAGAAACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGATTCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAATACAAAGGTTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGGCGACAGTGCGCACGATGCGATTCAAGCAAAAACTCAAGATCATCCTTCTCTTGTTGTAGTTGTTGGATTTCCTGAGCTAATGATTGGCGCTTCTTCTCTAGTTGATCCGTTTCATCAACAAGTTCGTTTGTGTGGTCCTCGCGACGCCTACGACACCGGGCTGCTGCTTGTTTATTTCGCTCTCGTCTAATTCGTCGTTTTTCCTCTTCTTCTGGAGTGAGATTTGAGGGCTTGTGTGGACGTCGACCACCAACATTTCGTCGTCCTCCGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCATAGTTGTAGTCCCGATTGCGAATGAATTCACTGCGTCAAAAAGCCCCGTCTCCAATTTCACATTATCATCTGAATTACTCGTAGCAAAAGTAGATCGGGAGGCTCGCGTACCGAAAGATGGTTGGTCCATTGATGCAGAAGATTTTGAGTCCAAATCATCACCGTTAAACCCATGTGATCCAGAAACGTGCCACGAGCCGTTGGAGGTTGAGCTGAGTGATTCCTGACTTACACCGCCATCCTGGCTATGATCTTCCATTGGGTAAGAAGGTG]

[+] EMBL CNS09RA5             [TATTTTGTTTCAAAAATGTTACAAATTCATAATATCGTTGTAAAAATCCTGTATTCTCCTGGCCAACAGCTTTCGATGATTAAATAAATTTGGCCCTCCACCACAACAGTTTGCCGATCGCTGATATTCACTGTTAACGATCGTTTGTTTAACGAAGGT CTAGGACTAGTCCTTAAAATTAACAAATGAACTCAATGCATTCGCGATGCCAATGTCCAGCAA TTTTAAAGACTGTTAATT TTTAACCATTTCTTT CGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATGGTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGGAAAACTGATCGGGGCTGCTATCGGTGTTAATCCCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTCCACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGAAATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCATTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAGTCGGTGTCGGCGTTTCAAGACTCTCGGTGTGTGTATTTGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BX619312             [                            tnatgATCGTNGTAAAAATCCCGTATTCTCCTGGCCAACAGCTTTCGATGATTAAATAAA TTGGCCCTCCACCACAACAGTTTGCCGATCGCTGATATTCACTGTTAACGATCGTTTGTTTAACGAAGGTGCTAGGACTCGNCCTTAAAATTAACAAATGAACTCAATGCATNCGCGATGCCAATGTCCAACAATTTTTAAAGACTGTTAATTATTTAACCATTNNTTTCCGAGATGCTGGCTAATATTGCACTATAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09GBK             [                                                                                                                        CTGATATTCACTGTTAACGATCGTTTGTTTAACGAAGGT CTAGGACTAGTCCTTAAAATTAACAAATGAACTCAATGCATTCGCGATGCCAATGTCCAGCAA TTTTAAAGACTGTTAATT TTTAACCATTTCTTT CGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATGGTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGG AAACTGATCGGGGCTGCTATCGGTGTTAAT CCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTCCACTCGATGGTGTCGACATTCCAACCGATCCT CAGCGTCAATTCTAGCGATTAATGGATATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCATTTGATGGTTTGGTACCACCGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX623391             [                                                                                                                             ATTCACTGTTAACGATCGTTNGTTTAACGAAGGT CTAGGACTAGTCCTTAAAATTAACAAATGAACTCAATGCATTCGCGATGCCAATGTCCAGCAA TTTTAAAGACTGTTAATT TTTAACCATTTCTTT CGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATGGTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGGAAAACTGATCGGGGCTGCTATCGGTGTTAATCCCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTCCACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGATATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCACTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAGTCGGTGTCGGCGTTTCAAGACTCTCGGTGTGTGTATTTGAAATTTTTAGTTTTTTAGAAACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGATTCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAATACAAAGGTTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGGCGACAGTGCGCACGATGCGATTCAAGCAAAAACTCAAGATCATCCTTCTCTTGTTGTAGTTGTTGGATTTCCTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS09JLD             [                                                                                                                                                                                                                GCCAATGTCCAGCAA TTTTCAAGACTGTTAATT TTTCACCATTTCTTT CGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATGGTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGGAAAACTGATCGGGGCTGCTATCGGTGTTAATCCCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTCCACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGATATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCATTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAGTCGGTGTCGGCGTTTCAAGACTCTCGGTGTGTGTATTTGACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AGA282782            [                                                                                                                                                                                                                                                                                                                                                                                                               ATCAGACTATCGAAGTTAAACAGTCCACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGATATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCACTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAGTCGGTGTCGGCGTCTCAAGACTCTCGGTGTGTGTATTTGAAATTTTTAGTTTTTTAGAAACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BM654218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTCAATTCTAGCGATTAATGGATATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTTCACTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAGTCGGTGTCGGCGTCTCAAGACTCTCGGTGTGTGTATTTGAAATTTTTAGTTTTTTAGAAACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGATTCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAGTACAAAGGTTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGGCGACAGTGCGCACGATGCGATTCAAGC  AAACTCAAGATCATCCTTCTCTTGTTGTAGTTGTTGGATTTCCTGAGCTAATGATTGGCGCTTCTTCTCTAGTTGATCCGTTTCATCAACAAGTTCGTTTGTGTGGTCCTCGCGACGCCTACGACACCGGGCTGCTGCTTGTTTATTTCGCTCTCGTCTAATTCGTCGTTTTTCCTCTTCTTCTGGAGTGAGATTTGAGcgg                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BX621558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTTTAGAAACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGATTCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAGTACAAAGGTTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGGCGACAGTGCGCACGATGCGATTCAAGCAAAAACTCAAGATCATCCTTCTCTTGTTGTAGTTGTTGGATTTCCTGAGCTAATGATTGGCGCTTCTTCTCTAGTTGATCCGTTTCATCAACAAGTTCGTTTGTGTGGTCCTCGCGACGCCTACGACACCGGGCTGCTGCTTGTTTATTTCGCTCTCGTCTAATTCGTCGTTTTTCCTCTTCTTCTGGAGTGAGATTTGAGGGCTTGTGTGGACGTCGACCACCAACATTTCGTCGTCCTCCGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCATAGTTGTAGTCCCGATTGCGAATGAATTCACTGCGTCAAAAAGCCCCGTCTCCAATTTCACATTATCATCTGAATTACTCGTAGCAAAAGTAGATCGGGAGGCTCGCGTACCGAAAGATGGTTGGTCCATTGATGCAGAAGATTTTGAGTCCAAATCATCACCGTTAAACCCATGTGATCCAGAAACGTGCCACGAGCCGTTGGAGGTTGAGCTGAGTGATTCCTGACTTACACCGCCATCCTGGCTATGATCTTCCATTGGGTAAGAAGGTG]
[-] EMBL BX626832             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gTTTTTAGAAACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGATTCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAATACAAAGGTTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGGCGACAGTGCGCACGATGCGATTCAAGCAAAAACTCAAGATCATCCTTCTCTTGTTGTAGTTGTTGGATTTCCTGAGCTAATGATTGGCGCTTCTTCTCTAGTTGATCCGTTTCATCAACAAGTTCGTTTGTGTGGTCCTCGCGACGCCTACGACACCGGGCTGCTGCTTGTTTATTTCGCTCTCGTATAATTCGTCGTTTTTCCTCTTCTTCTGGAGTGAGATTTGAGGGCTTGTGTGGACGTCGACCACCAACATTTCGTCGTCCTCCGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCCTAGTTGTAGTCCCGATTGCGAATGAATTCACTGCGTCCAAAAGCCCCGTCTCCAATTTCACATTATCATCTGAATTACTCGTAGCAAAAGTAGATCGGGAGGCTCGCGTACCGAAAGATGGTTGGTCCATTGATGCAGAAGATTTTGAGTCCAAATCATCACCGTTAAACCCATGTGATCCAGAAACGTGCCACGAGCCGTTGGAGGTTGAGCTGAGTGATTCCTGACTTAC                                         ]


>consensus_8309#0 TATTTTGTTTCAAAAATGTTACAAATTCATAATATCGTTGTAAAAATCCTGTATTCTCCT GGCCAACAGCTTTCGATGATTAAATAAATTTGGCCCTCCACCACAACAGTTTGCCGATCG CTGATATTCACTGTTAACGATCGTTTGTTTAACGAAGGTCTAGGACTAGTCCTTAAAATT AACAAATGAACTCAATGCATTCGCGATGCCAATGTCCAGCAATTTTAAAGACTGTTAATT TTTAACCATTTCTTTCGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATG GTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGGAAAACTGATCG GGGCTGCTATCGGTGTTAATCCCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTC CACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGAT ATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTT CATTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAG TCGGTGTCGGCGTTTCAAGACTCTCGGTGTGTGTATTTGAAATTTTTAGTTTTTTAGAAA CTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGAT TCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAATACAAAGG TTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGGC GACAGTGCGCACGATGCGATTCAAGCAAAAACTCAAGATCATCCTTCTCTTGTTGTAGTT GTTGGATTTCCTGAGCTAATGATTGGCGCTTCTTCTCTAGTTGATCCGTTTCATCAACAA GTTCGTTTGTGTGGTCCTCGCGACGCCTACGACACCGGGCTGCTGCTTGTTTATTTCGCT CTCGTCTAATTCGTCGTTTTTCCTCTTCTTCTGGAGTGAGATTTGAGGGCTTGTGTGGAC GTCGACCACCAACATTTCGTCGTCCTCCGCTACCATTTCGCGCAGAAGGGCCAGAGGTCC GCATAGTTGTAGTCCCGATTGCGAATGAATTCACTGCGTCAAAAAGCCCCGTCTCCAATT TCACATTATCATCTGAATTACTCGTAGCAAAAGTAGATCGGGAGGCTCGCGTACCGAAAG ATGGTTGGTCCATTGATGCAGAAGATTTTGAGTCCAAATCATCACCGTTAAACCCATGTG ATCCAGAAACGTGCCACGAGCCGTTGGAGGTTGAGCTGAGTGATTCCTGACTTACACCGC CATCCTGGCTATGATCTTCCATTGGGTAAGAAGGTG



consensusID : consensus_8309#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 851
fasta sequence
                              [TAGNACGGTANACGGANAGATGTTGCACTAGTGTTGATAGATATATAANTTTCGTTAATTNTGGTTGTCGGGTTGTTAATTNATGTGGCCAAAGTTATGCAAATATGTGGTTGTGGCCTAAAGTGGNTTTTGTATGGGAGGTGCTGTCAAGGTTATGGGGTGTGTATAANGGTGTCANGAGTGGGGGGTNGCTTTGNTGTGTTGAGGTCNGGTGGNTAGGGGGTGGAGCAAGGTTGGGTCGGGTTGGCGTAAGTGGGTGAAATNTTGAGATGCTGNGTGTGAGGTGCAGAGGAGTAAAGNCNGTGGTGTNTGGTGTGNTNAGTTGTTGGATTTNTCCTGAGCTNAGTGANNTTGGCGCGTTCCNNTCTCTAGGCTTGATCCGNTTTCAGTCNAGCAAGTTCGNTGTTGTGGTGGTNCCTCGCGACGCGCTAGCGACACCCGGGTCTGNCTGTCTTTGTTTATTCTCGCTCTCGTCTAATTCGTCGTTTNGTCCTGCGTTCTTCTGGAGTGAGATTTGAGGGCGTTGTGTGGACGTCGTACCCCCTATACATTTCGTCGTCCTCCGGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCCTAGTTGTAGTACCCGATTGCGAATGAATTCACTGCGTCAAAATAGCCCCGTCTCCATATTTCTACNATTATCTATCTGNTATTACTCGTAGCAAATATAGTAGTATCGGGAGGCTCGCGTTACCGAAAGATGGTTGGTCCATTGTATGCAGTAAGATTTTGTAGTCCAAATCTATCACCGTTAAACCCATGTGATCCAGANACGTGCCACGAGCCGTTGAGTTTAGCTNAGTATTAACTCGGGCAATTCTG]

[-] EMBL AL934740             [TAGNACGGTANACGGANAGATGTTGCACTAGTGTTGATAGATATATAANTTTCGTTAATTNTGGTTGTCGGGTTGTTAATTNATGTGGCCAAAGTTATGCAAATATGTGGTTGTGGCCTAAAGTGGNTTTTGTATGGGAGGTGCTGTCAAGGTTATGGGGTGTGTATAANGGTGTCANGAGTGGGGGGTNGCTTTGNTGTGTTGAGGTCNGGTGGNTAGGGGGTGGAGCAAGGTTGGGTCGGGTTGGCGTAAGTGGGTGAAATNTTGAGATGCTGNGTGTGAGGTGCAGAGGAGTAAAGNCNGTGGTGTNTGGTGTGNTNAGTTGTTGGATTTNTCCTGAGCTNAGTGANNTTGGCGCGTTCCNNTCTCTAGGCTTGATCCGNTTTCAGTCNAGCAAGTTCGNTGTTGTGGTGGTNCCTCGCGACGCGCTAGCGACACCCGGGTCTGNCTGTCTTTGTTTATTCTCGCTCTCGTCTAATTCGTCGTTTNGTCCTGCGTTCTTCTGGAGTGAGATTTGAGGGCGTTGTGTGGACGTCGTACCCCCTATACATTTCGTCGTCCTCCGGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCCTAGTTGTAGTACCCGATTGCGAATGAATTCACTGCGTCAAAATAGCCCCGTCTCCATATTTCTACNATTATCTATCTGNTATTACTCGTAGCAAATATAGTAGTATCGGGAGGCTCGCGTTACCGAAAGATGGTTGGTCCATTGTATGCAGTAAGATTTTGTAGTCCAAATCTATCACCGTTAAACCCATGTGATCCAGANACGTGCCACGAGCCGTTGAGTTTAGCTNAGTATTAACTCGGGCAATTCTG]


>consensus_8309#1 TAGNACGGTANACGGANAGATGTTGCACTAGTGTTGATAGATATATAANTTTCGTTAATT NTGGTTGTCGGGTTGTTAATTNATGTGGCCAAAGTTATGCAAATATGTGGTTGTGGCCTA AAGTGGNTTTTGTATGGGAGGTGCTGTCAAGGTTATGGGGTGTGTATAANGGTGTCANGA GTGGGGGGTNGCTTTGNTGTGTTGAGGTCNGGTGGNTAGGGGGTGGAGCAAGGTTGGGTC GGGTTGGCGTAAGTGGGTGAAATNTTGAGATGCTGNGTGTGAGGTGCAGAGGAGTAAAGN CNGTGGTGTNTGGTGTGNTNAGTTGTTGGATTTNTCCTGAGCTNAGTGANNTTGGCGCGT TCCNNTCTCTAGGCTTGATCCGNTTTCAGTCNAGCAAGTTCGNTGTTGTGGTGGTNCCTC GCGACGCGCTAGCGACACCCGGGTCTGNCTGTCTTTGTTTATTCTCGCTCTCGTCTAATT CGTCGTTTNGTCCTGCGTTCTTCTGGAGTGAGATTTGAGGGCGTTGTGTGGACGTCGTAC CCCCTATACATTTCGTCGTCCTCCGGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCC TAGTTGTAGTACCCGATTGCGAATGAATTCACTGCGTCAAAATAGCCCCGTCTCCATATT TCTACNATTATCTATCTGNTATTACTCGTAGCAAATATAGTAGTATCGGGAGGCTCGCGT TACCGAAAGATGGTTGGTCCATTGTATGCAGTAAGATTTTGTAGTCCAAATCTATCACCG TTAAACCCATGTGATCCAGANACGTGCCACGAGCCGTTGAGTTTAGCTNAGTATTAACTC GGGCAATTCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8309#0      TATTTTGTTTCAAAAATGTTACAAATTCATAATATCGTTGTAAAAATCCTGTATTCTCCT 60
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      GGCCAACAGCTTTCGATGATTAAATAAATTTGGCCCTCCACCACAACAGTTTGCCGATCG 120
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      CTGATATTCACTGTTAACGATCGTTTGTTTAACGAAGGTCTAGGACTAGTCCTTAAAATT 180
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      AACAAATGAACTCAATGCATTCGCGATGCCAATGTCCAGCAATTTTAAAGACTGTTAATT 240
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      TTTAACCATTTCTTTCGAGATGCTGGCTAATATTGCACTATAGACTACATAGTTTCGATG 300
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      GTTCTGTACTGGTTGGTGTAATAAGCTCCAAGGGATTTCGGTTGGATGGAAAACTGATCG 360
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      GGGCTGCTATCGGTGTTAATCCCGTACCACCCTCCATCAGACTATCGAAGTTAAACAGTC 420
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      CACTCGATGGTGTCGACATTCCAACCGATCCTCCAGCGTCAATTCTAGCGATTAATGGAT 480
consensus_8309#1      ------------------------------------------------------------
                                                                                  

consensus_8309#0      ATTGTGCAGCTGACTTTACATCTAAGCTATCTGGACGTGTAGGGCGACTACCACTTGCTT 540
consensus_8309#1      -----------------------------------------------------------T 1
                                                                                 *

consensus_8309#0      CATTTGATGGTTTGGTACCAGCGAAACTAACGCCTACGAGGGGAATGAAGCCACTGCTAG 600
consensus_8309#1      AGNACGGTANACGGANAGATGTTGCACTAGTGTTGATAGATATATAANTTTCGTTAATTN 61
                           * *     *  *   *    ****  *   *       *       *  *  *  

consensus_8309#0      TCGGTGTCGGCGTTTCAAGACTCTCGGTGTGTGTATTTGAAATTTTTAGTTTTT-TAGAA 659
consensus_8309#1      TGGTTGTCGGGTTGTTAATTNATGTGGCCAAAGTTATGCAAATATGTGGTTGTGGCCTAA 121
                      * * ******  * * **       **     **  *  **** * * *** *     **

consensus_8309#0      ACTGTGCTGTGTTCAGAAGCATCGTTGTCGAGATGATCCTGCATCTGCGTTGCACGTAGA 719
consensus_8309#1      AGTGGNTTTTGTATGGGAGG--TGCTGTCAAGGTTATGGGGTGT-------GTATAANGG 172
                      * **   * ***   * **    * **** ** * **   *  *       * *    * 

consensus_8309#0      TTCTGCCGCTGAAGAATAAATTCTTCATCTGGTTCGGTTTTAATTTTTGGCAATACAAAG 779
consensus_8309#1      TGTCANGAGTGGGGGGTNGCTT-------TGNT---GTGTTGAGGTCNGGTGGN-TAGGG 221
                      *        **  *  *   **       ** *   ** ** *  *  **      *  *

consensus_8309#0      GTTGCAATGTTCTCGAGCTCAGTAGGTTTTAAGTCAATGGGACTGTGACGAGCCTGTAGG 839
consensus_8309#1      GGTGGAGCAAGGTTGGGTCGGGTTGGCGT-AAGTGGGTGAAATNTTGA-GATGCTGNGTG 279
                      * ** *      * * *    ** **  * ****   **  *   *** **  ***   *

consensus_8309#0      CGACAGTGCGCACGATGCGATTCAAGCAAAAACTCAAGATCATCCTTCTCTTGTTGTAGT 899
consensus_8309#1      TGA-GGTGCAGAGG----------AGTAAAGNCN----GTGGTGTNTGGTGTGNTN-AGT 323
                       **  ****  * *          ** ***  *      *  *   *    ** *  ***

consensus_8309#0      TGTTGGATTTC--CTGAGCTAAT---GATTGGCGCTT---CTTCTCTAG--TTGATCCGT 949
consensus_8309#1      TGTTGGATTTNTCCTGAGCTNAGTGANNTTGGCGCGTTCCNNTCTCTAGGCTTGATCCGN 383
                      **********   ******* *      ******* *     *******  ******** 

consensus_8309#0      TTCA---TCAACAAGTTCGTTTGTGTGGT----CCTCGCGACGC-CTA-CGACACCGGGC 1000
consensus_8309#1      TTTCAGTCNAGCAAGTTCGNTGTTGTGGTGGTNCCTCGCGACGCGCTAGCGACACCCGGG 443
                      **       * ******** *  ******    *********** *** ******* ** 

consensus_8309#0      T---GCTGC--TTGTTTATT-TCGCTCTCGTCTAATTCGTCGTTTTTCCTC---TTCTTC 1051
consensus_8309#1      TCTGNCTGTCTTTGTTTATTCTCGCTCTCGTCTAATTCGTCGTTTNGTCCTGCGTTCTTC 503
                      *    ***   ********* ************************   *     ******

consensus_8309#0      TGGAGTGAGATTTGAGGGC-TTGTGTGGACGTCG-ACCACCAA--CATTTCGTCGTCCTC 1107
consensus_8309#1      TGGAGTGAGATTTGAGGGCGTTGTGTGGACGTCGTACCCCCTATACATTTCGTCGTCCTC 563
                      ******************* ************** *** ** *  ***************

consensus_8309#0      CG-CTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCATAGTTGTAGT-CCCGATTGCGAA 1165
consensus_8309#1      CGGCTACCATTTCGCGCAGAAGGGCCAGAGGTCCGCCTAGTTGTAGTACCCGATTGCGAA 623
                      ** ********************************* ********** ************

consensus_8309#0      TGAATTCACTGCGTCAAAA-AGCCCCGTCTCCA-ATTTCA--CATTATC-ATCTGA-ATT 1219
consensus_8309#1      TGAATTCACTGCGTCAAAATAGCCCCGTCTCCATATTTCTACNATTATCTATCTGNTATT 683
                      ******************* ************* *****    ****** *****  ***

consensus_8309#0      ACTCGTAGCAAAAGTAG----ATCGGGAGGCTCGCGT-ACCGAAAGATGGTTGGTCCATT 1274
consensus_8309#1      ACTCGTAGCAAATATAGTAGTATCGGGAGGCTCGCGTTACCGAAAGATGGTTGGTCCATT 743
                      ************  ***    **************** **********************

consensus_8309#0      G-ATGCAG-AAGATTTTG-AGTCCAAATC-ATCACCGTTAAACCCATGTGATCCAGAAAC 1330
consensus_8309#1      GTATGCAGTAAGATTTTGTAGTCCAAATCTATCACCGTTAAACCCATGTGATCCAGANAC 803
                      * ****** ********* ********** *************************** **

consensus_8309#0      GTGCCACGAGCCGTTGGAGGTTGAGCTGAGTGATTCCTGACTTACACCGCCATCCTGGCT 1390
consensus_8309#1      GTGCCACGAGCCGTTGA--GTTTAGCTNAGTA----TTAACTCGG---GCAATTCTG--- 851
                      ****************   *** **** ***      * ***      ** ** ***   

consensus_8309#0      ATGATCTTCCATTGGGTAAGAAGGTG 1416
consensus_8309#1      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)