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Anopheles gambiae
cluster # 8318 cluster # 8318       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8318#0 length = 1241 sequences # 7  
consensus_8318#1 length = 798 sequences # 2  
consensus_8318#2 length = 517 sequences # 1  

consensusID : consensus_8318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1241
fasta sequence
                              [CTCCACAACACACAACAAGCCCACAAAGCAAGCGCGTCCGTACAAGCAGTGCAG-GAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGAGACTTCCC-CCTTCGCTTGCCGCATCGCGGA-CCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCGAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAATGACAGCAAATCCTGGCTGTCCACCCTGAAGCCGTGCGAGTTTTACACGGAGCTGGAGGAGCTGTTCAGTGTGGTGGAGCAGCGGACCGCCACCGCGGTCGTCAGCGGCAGCCCGGAGGTGGAAACGATCGTCGGAATCGAAGGTGTTACGTACTATGATGAAGAATTTGTCACCGAAGAAGGACAGGAACTGGCGGTGGATGATGACACGGTCGTGATTGAGGAGATTGTGTACGATTCACAGGATGCGATCGAGTTTGAAGAACCCGTCCCCGGTCCGAGCACCTCGAAAGCCTCGTCTGCCCCGCTACAGCCAGCCCAGCCGGCCGCCCCGAAGCGCAAAAAGCTGACGGCGGAAAACATGGACGGTCTGCTGTTGCGGATTTGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGAGGGGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACGGCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCCCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAATGCAACTTTTTTTTAGTATAAAAC-ACAATAAAAAAAAAAAA]

[+] EMBL CNS08IVH             [CTCCACAACACACAACAAGCCCACAAAGCAAGCGCGTCCGTACAAGCAGTGCAG GAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGAGACTTCCC CCTTCGCTTGCCGCATCGCGGA CCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCGAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAATGACAGCAAATCCTGGCTGTCCACCCTGAAGCCGTGCGAGTTTTACACGGAGCTGGAGGAGCTGTTCAGTGTGGTGGAGCAGCGGACCGCCACCGCGGTCGTCAGCGGCAGCCCGGAGGTGGAAACGATCGTCGGAATCGAAGGTGTTACGTACTATGATGAAGAATTTGTCACCGAAGAAGGACAGGAACTGGCGGTGGATGATGACACGGTCGTGATTGAGGAGATTGTGTACGATTCACAGGATGCGATCGAGTTTGAAGAACCCGTCCCCGGTCCGAGCACCTCGAAAGCCTCGTCTGCCCCGCTACAGCCAGCCCAGCCGGCCGCCCCGAAGCGCAAAAAGCTGACGGCGGAAAACATGGACGGTCTGCTGTTGCGGATTTGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGACGGGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAA                                                                                                                                                                                                                                               ]
[+] EMBL CNS08INL             [        CACACAACAAGCCCACAAAGCAAGCGCGTCCGTACAAGCAGTGCAG GAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGAGACTTCCC CCTTCGCTTGCCGGATCG GGA CCCTTGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM614301             [          ccgAACAAGCCCACAAAGCAAGCGCGTCCGTACAAGCAGTGCAGTGAAAACAACAGTGCCACCCAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGACACTTCCCTTCTCCGCTTGCCGCATCGCGGA CCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCGAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAACGACAGCAAATCCTGGCTGTCCACCCTGAAGCCGTGCGAGTTTTACACGGAGCTGGAGCAGCTGTTCAGTGTGGTGGAGCAGCGGACCGCCACCGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS098GX             [        aaacgcACAAG CCACAAAGCAAGCGCGTGCGTACAAGCAGTGCAG GAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGAGACTTCCC CCTTCGCTTGCCGCATCGCGGATCCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCGAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAATGACAGCAAATCCTGGCTGTCCACCCTGAAGCCGTGCGAGTTTTACACGGAGCTGGAGGAGCTGTTCAGTGTGGTGGAGCAGCGGACCGCCACCGCGGTCGTCAGCGGCAGCCCGGAGGTGGAAACGATCGTCGGAATCGAAGGTGTTACGTACTATGATGAAGAATTTGTCACCGAAGAAGGACAGGAACTGGCGGTGGATGATGACACGGTCGTGATTGAGGAGATTGTGTACGATTCACAGGATGCGATCGAGTTTGAAGAACCCGTCCCCGGTCCGAGCACCTCGAAAGCCTCGTCTGCCCCGCTACAGCCAGCCCAGCCGGCCGCCCCGAAGCGCAAAAAGCTGACGGCGGAAAACATGGACGGTCTGCTGTTGCGGATTTGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGAGGCGGAA                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08IVI             [                                                                                                                                                                                                                                                                                          CCGCCAGATCGAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAATGACAGCAAATCCTGGCTGTCCACCCTGAAGCCGTGCGAGTTTTACACGGAGCTGGAGGAGCTGTTCAGTGTGGTGGAGCAGCGGACCGCCACCGCGGTCGTCAGCGGCAGCCCGGAGGTGGAAACGATCGTCGGAATCGAAGGTGTTACGTACTATGATGAAGAATTTGTCACCGAAGAAGGACAGGAACTGGCGGTGGATGATGACACGGTCGTGATTGAGGAGATTGTGTACGATTCACAGGATGCGATCGAGTTTGAAGAACCCGTCCCCGGTCCGAGCACCTCGAAAGCCTCGTCTGCCCCGCTACAGCCAGCCCAGCCGGCCGCCCCGAAGCGCAAAAAGCTGACGGCGGAAAACATGGACGGTCTGCTGTTGCGGATTTAAAAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGAGCGGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACGGCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCGCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAATGCAACTTTTTTTTAGTATAAAAC ACAATAAAta       ]
[-] EMBL CNS098GY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGGTCGTCAGCGGCAGCCCGGAGGTGGAAACGATCGTCGGAATCGAAGGTGTTACGTACTATGATGAAGAATTTGTCACCGAAGAAGGACAGGAACTGGCGGTGGATGTTGAAACGGTCGTGATTGAGGAGATTGTGTACGATTCACAGGATGCGATCGAGTTTGAAGAACCCGTCCCCGGTCCGAGCACCTCGAAAGCCTCTTCTGCCCCGCTACAGCCAGCCCAGCCGGCCGCCCCGAAGCGCAAAAAGCTGACGGCGGAAAACATGGACGGTCTGCTGTTGCGGATTTGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGAGCGGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACGGCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCCCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGGAAGATGATCATGTAATAAGTACGAGAAATACATAAAATGCAACTTTTTTTTAGTATAAAACAACAAAAAAAAAAAAAAA]
[-] EMBL CNS08INM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              accCCCCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAATGCAACTTTTTTTTAGTATAAAAA ACAATAACAAta     ]


>consensus_8318#0 CTCCACAACACACAACAAGCCCACAAAGCAAGCGCGTCCGTACAAGCAGTGCAGGAAAAC AACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTG AGACTTCCCCCTTCGCTTGCCGCATCGCGGACCCTTGACGAAAATGACGAAACGCAACGC CTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTT CCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCGAGTACGAGAT GCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAA GAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAATGA CAGCAAATCCTGGCTGTCCACCCTGAAGCCGTGCGAGTTTTACACGGAGCTGGAGGAGCT GTTCAGTGTGGTGGAGCAGCGGACCGCCACCGCGGTCGTCAGCGGCAGCCCGGAGGTGGA AACGATCGTCGGAATCGAAGGTGTTACGTACTATGATGAAGAATTTGTCACCGAAGAAGG ACAGGAACTGGCGGTGGATGATGACACGGTCGTGATTGAGGAGATTGTGTACGATTCACA GGATGCGATCGAGTTTGAAGAACCCGTCCCCGGTCCGAGCACCTCGAAAGCCTCGTCTGC CCCGCTACAGCCAGCCCAGCCGGCCGCCCCGAAGCGCAAAAAGCTGACGGCGGAAAACAT GGACGGTCTGCTGTTGCGGATTTGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCG CAACCAGATGGAGTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGAGGGGGAACA TCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACA GAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCA CGAAGCGAAACGGCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCCCCCCGAG GGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGAT GAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAA TGCAACTTTTTTTTAGTATAAAACACAATAAAAAAAAAAAA



consensusID : consensus_8318#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 798
fasta sequence
                              [CAAGCAGTGCAGGAAAACAACAGTGCCACTGAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGAGACTTCCCCCTTCGCTTGCCGCATCGCGGACCCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCG-AGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCG-AAACGTTCCGCGAGCGCGAGGTGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACG-GCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCGCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAAAGCAACTTTTTTTTAGTATAAAACACAATA]

[+] EMBL CNS08RZN             [CAAGCAGTGCAGGAAAACAACAGTGCCACTGAGCGAATGGAGCTATAGTCCATTTGGTTTTTGGCGTTCTGTTTTGTGAGACTTCCCCCTTCGCTTGCCGCATCGCGGACCCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCG AGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCG AAACGTTCCGCGAGCGCGAGGTGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACG GCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCGCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAAAG                            ]
[-] EMBL CNS08RZO             [                                                                                                                                                                                 TACGGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACCGCCAGATCGAAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCCAGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGGAGCAGCACGCAGCGGAATGCAGAAGCAGAACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAGTTCGCAAACGTTCC CGAGCGCGAGCGGGGACATCTGCTCCAGCTGAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACGCGCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCGCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAATGCAACTTTTTTTTAGTATAAAACACAATA]


>consensus_8318#1 CAAGCAGTGCAGGAAAACAACAGTGCCACTGAGCGAATGGAGCTATAGTCCATTTGGTTT TTGGCGTTCTGTTTTGTGAGACTTCCCCCTTCGCTTGCCGCATCGCGGACCCCTTGACGA AAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATAC GGACGAGCTGCGTGTCCTTCCTGGACGGTACCATCAACAACCGGAAGGGCCAGATGTACC GCCAGATCGAGTACGAGATGCAACGGCGCGGCGGCACCGGAGCGAATCGGGACGCCCGCC AGATCGAGCACAAGTGGAAGAACCTCAAGTTTGGCTACGAGCGGTACAAGAGCGAGCTGG AGCAGCACGCAGCGAAATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGA GTACATCGAGAACGAGTTCGAAACGTTCCGCGAGCGCGAGGTGGAACATCTGCTCCAGCT GAAGCTCGATCTGGAGGTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCAT CGGTGAGGGTGGGCCGAACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACG GCGCCGCGTTGGGACCGGTGCTGGCAGGCGGAAGTAGGCCGCCCCGAGGGAGGGTTGTAA TGAGGGCTGTAATGGTAAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAA TGCGAATTCGAAAGATGATCATGTAATAAGTACGAGAAATACATAAAAAGCAACTTTTTT TTAGTATAAAACACAATA



consensusID : consensus_8318#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 517
fasta sequence
                              [CCCGAGGTTANACAACACACAACAAGCCCACAAAGCAAGCGCGTCTGTACAAGCAGTGCAGGAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTATTTTGGCGTTCTGTATTTGTGAGACTTCCCCCTATCGCTATGCCGCATCGCGGACCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCGAGACTGCTCGACATCATACGGACGAGGCTGCGTGTCCTTCCTGGACGGTACCATCAATGAACCGGAAGGGCCAGATTGTACCGCAGATACGAGGTACGAGGATGCAAACGTGCNGCGGCTGAGCACCCGGATGCGAATCGGGGACTGCCCGCAGATCGAGGCACAAGTGGGAAGAACCTCAAAGTTTAGGCTACGCAGCGGTACAAGAGCGAGCTGGAGCAGCTACGCACGCGAATGACAGCCAAATCCTGGGCTTGTCCACCCTGTAATNGCCGNTGCGANGTTCTTACACGGAGCCTTGGAG]

[+] EMBL AL695405             [CCCGAGGTTANACAACACACAACAAGCCCACAAAGCAAGCGCGTCTGTACAAGCAGTGCAGGAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTATTTTGGCGTTCTGTATTTGTGAGACTTCCCCCTATCGCTATGCCGCATCGCGGACCCTTGACGAAAATGACGAAACGCAACGCCTGGTCACGGGCGGAAACGGCGAGACTGCTCGACATCATACGGACGAGGCTGCGTGTCCTTCCTGGACGGTACCATCAATGAACCGGAAGGGCCAGATTGTACCGCAGATACGAGGTACGAGGATGCAAACGTGCNGCGGCTGAGCACCCGGATGCGAATCGGGGACTGCCCGCAGATCGAGGCACAAGTGGGAAGAACCTCAAAGTTTAGGCTACGCAGCGGTACAAGAGCGAGCTGGAGCAGCTACGCACGCGAATGACAGCCAAATCCTGGGCTTGTCCACCCTGTAATNGCCGNTGCGANGTTCTTACACGGAGCCTTGGAG]


>consensus_8318#2 CCCGAGGTTANACAACACACAACAAGCCCACAAAGCAAGCGCGTCTGTACAAGCAGTGCA GGAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTATTTTGGCGTTCT GTATTTGTGAGACTTCCCCCTATCGCTATGCCGCATCGCGGACCCTTGACGAAAATGACG AAACGCAACGCCTGGTCACGGGCGGAAACGGCGAGACTGCTCGACATCATACGGACGAGG CTGCGTGTCCTTCCTGGACGGTACCATCAATGAACCGGAAGGGCCAGATTGTACCGCAGA TACGAGGTACGAGGATGCAAACGTGCNGCGGCTGAGCACCCGGATGCGAATCGGGGACTG CCCGCAGATCGAGGCACAAGTGGGAAGAACCTCAAAGTTTAGGCTACGCAGCGGTACAAG AGCGAGCTGGAGCAGCTACGCACGCGAATGACAGCCAAATCCTGGGCTTGTCCACCCTGT AATNGCCGNTGCGANGTTCTTACACGGAGCCTTGGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8318#0      -------CTCCACAACACACAACAAGCCCACAAAGCAAGCGCGTCCGTACAAGCAGTGCA 53
consensus_8318#1      -------------------------------------------------CAAGCAGTGCA 11
consensus_8318#2      CCCGAGGTTANACAACACACAACAAGCCCACAAAGCAAGCGCGTCTGTACAAGCAGTGCA 60
                                                                       ***********

consensus_8318#0      GGAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGT-TTTTGGCGTTCT 112
consensus_8318#1      GGAAAACAACAGTGCCACTGAGCGAATGGAGCTATAGTCCATTTGGT-TTTTGGCGTTCT 70
consensus_8318#2      GGAAAACAACAGTGCCACTCAGCGAATGGAGCTATAGTCCATTTGGTATTTTGGCGTTCT 120
                      ******************* *************************** ************

consensus_8318#0      GT-TTTGTGAGACTTCCCCCT-TCGCT-TGCCGCATCGCGGACCC-TTGACGAAAATGAC 168
consensus_8318#1      GT-TTTGTGAGACTTCCCCCT-TCGCT-TGCCGCATCGCGGACCCCTTGACGAAAATGAC 127
consensus_8318#2      GTATTTGTGAGACTTCCCCCTATCGCTATGCCGCATCGCGGACCC-TTGACGAAAATGAC 179
                      ** ****************** ***** ***************** **************

consensus_8318#0      GAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAG 228
consensus_8318#1      GAAACGCAACGCCTGGTCACGGGCGGAAACGGCCGAGCTGCTCGACATCATACGGACGAG 187
consensus_8318#2      GAAACGCAACGCCTGGTCACGGGCGGAAACGGCGAGACTGCTCGACATCATACGGACGAG 239
                      *********************************    ***********************

consensus_8318#0      -CTGCGTGTCCTTCCTGGACGGTACCATCAAC-AACCGGAAGGGCCAGAT-GTACCGCCA 285
consensus_8318#1      -CTGCGTGTCCTTCCTGGACGGTACCATCAAC-AACCGGAAGGGCCAGAT-GTACCGCCA 244
consensus_8318#2      GCTGCGTGTCCTTCCTGGACGGTACCATCAATGAACCGGAAGGGCCAGATTGTACCGCAG 299
                       ******************************  ***************** *******  

consensus_8318#0      GATCGAG-TACGAG-ATGCAACGGCGCGGCGGCA------CCGGA-GCGAATCGGG-ACG 335
consensus_8318#1      GATCGAG-TACGAG-ATGCAACGGCGCGGCGGCA------CCGGA-GCGAATCGGG-ACG 294
consensus_8318#2      ATACGAGGTACGAGGATGCAAACGTGCNGCGGCTGAGCACCCGGATGCGAATCGGGGACT 359
                         **** ****** ******  * ** *****       ***** ********** ** 

consensus_8318#0      CCCGCCAGATCGAG-CACAAGTGG-AAGAACCTCAAGTTT--GGCTACG-AGCGGTACAA 390
consensus_8318#1      CCCGCCAGATCGAG-CACAAGTGG-AAGAACCTCAAGTTT--GGCTACG-AGCGGTACAA 349
consensus_8318#2      GCCCGCAGATCGAGGCACAAGTGGGAAGAACCTCAAAGTTTAGGCTACGCAGCGGTACAA 419
                       **  ********* ********* ***********  **  ******* **********

consensus_8318#0      GAGCGAGCTGGAGCAGC-ACGCA-GCGAATGACAGCAAATCCTGGCTGTCCACCCTGAAG 448
consensus_8318#1      GAGCGAGCTGGAGCAGC-ACGCA-GCGAA------------------------------- 376
consensus_8318#2      GAGCGAGCTGGAGCAGCTACGCACGCGAATGACAGCCAAATCCTGGGCTTGTCCACCCTG 479
                      ***************** ***** *****                               

consensus_8318#0      CCGTGCGAGTTTTACACGGAGCTGGAGGAGCTGTTCAGTGTGGTGGAGCAGCGGACCGCC 508
consensus_8318#1      ------------------------------------------------------------
consensus_8318#2      TAATNGCCGNTGCGANGTTCTTACACGGAGCCTTGGAG---------------------- 517
                                                                                  

consensus_8318#0      ACCGCGGTCGTCAGCGGCAGCCCGGAGGTGGAAACGATCGTCGGAATCGAAGGTGTTACG 568
consensus_8318#1      ------------------------------------------------------------
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      TACTATGATGAAGAATTTGTCACCGAAGAAGGACAGGAACTGGCGGTGGATGATGACACG 628
consensus_8318#1      ------------------------------------------------------------
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      GTCGTGATTGAGGAGATTGTGTACGATTCACAGGATGCGATCGAGTTTGAAGAACCCGTC 688
consensus_8318#1      ------------------------------------------------------------
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      CCCGGTCCGAGCACCTCGAAAGCCTCGTCTGCCCCGCTACAGCCAGCCCAGCCGGCCGCC 748
consensus_8318#1      ------------------------------------------------------------
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      CCGAAGCGCAAAAAGCTGACGGCGGAAAACATGGACGGTCTGCTGTTGCGGATTTGCGAA 808
consensus_8318#1      ------------------------------------------------------------
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      ATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAG 868
consensus_8318#1      ATGCAGAAGCAGCACAACGACACGTTCAACCGCAACCAGATGGAGTACATCGAGAACGAG 436
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      TTCGAAACGTTCCGCGAGCGCGAGGGGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAG 928
consensus_8318#1      TTCGAAACGTTCCGCGAGCGCGAGGTGGAACATCTGCTCCAGCTGAAGCTCGATCTGGAG 496
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      GTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCG 988
consensus_8318#1      GTGTTGAAGCAAAAGTTTCTCGCCCGAATACAGAAGATTGCCATCGGTGAGGGTGGGCCG 556
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      AACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACGGCGCCGCGTTGGGACC 1048
consensus_8318#1      AACGAGGCGGTGGAAGAGACGGTGGTGGGGCACGAAGCGAAACGGCGCCGCGTTGGGACC 616
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      GGTGCTGGCAGGCGGAAGTAGGCCCCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGT 1108
consensus_8318#1      GGTGCTGGCAGGCGGAAGTAGGCCGCCCCGAGGGAGGGTTGTAATGAGGGCTGTAATGGT 676
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      AAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGAT 1168
consensus_8318#1      AAAGCAAACAAATTAATACTAAAAGAACAGATGAGGGACGTAAATGCGAATTCGAAAGAT 736
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      GATCATGTAATAAGTACGAGAAATACATAAAATGCAACTTTTTTTTAGTATAAAACACAA 1228
consensus_8318#1      GATCATGTAATAAGTACGAGAAATACATAAAAAGCAACTTTTTTTTAGTATAAAACACAA 796
consensus_8318#2      ------------------------------------------------------------
                                                                                  

consensus_8318#0      TAAAAAAAAAAAA 1241
consensus_8318#1      TA----------- 798
consensus_8318#2      -------------
                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)