cluster # 8331

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Anopheles gambiae
cluster # 8331 cluster # 8331 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8331#0 length = 1550 sequences # 8

consensus_8331#1 length = 833 sequences # 1
consensus_8331#2 length = 415 sequences # 1

consensusID : consensus_8331#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1550
fasta sequence

                              [GCAAGAATCGNGCCCGAGGGTANGTTTACAAATGAAGCGAAAGTCGGTTTCCTAAGCTCGAAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATCCCCGACACGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCG-CATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCTCTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTT-CGTGGAGGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGG-AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCGAGACGGACGAGGTGTACCCGTTGAAGCAACAGGCCGATCAGGAACAGTACGACACGGAGGCAAACTTGACGGAATGTGCCAAAAAGCTGAAAGGGCAGCTGATGGATGCGAAAATTCTGTTCGATGGAGCGCCGAAGCTGGGCGCCGACACCGTGGAGGGTGTGCTGACGATGAAAAATCAAGATAAATTCCTGGCAAACGTCTATCTGCCGACGTCTGCCGAACTTACCGCGAGTGAGGCGAAAATAGAACAGTTCGAGGGTACGCTGAAATTCGACGGCATTGTCAGCTCACAGATTTACATACACTCGCGATGCACGTTCGCCGAAGCGGAACGCTTCATCGTCACCGACATCGTACGGTCGCTGATGTCGCGCATTCAAATCCACTGTGATTCACTGGTACAGACGGAGGACACGCCCCAGGACAAGATTACGCTGAACGAGTTGCCCCGCCGCGTGTACTTCCCGGTGCGCCAGGGTCCGGGCGGTTTTCCGGTAGAGTTCAGTGACTATCTGTTCCCGGAGGAAAGCGTCGAAACGCCGCTGGTGCGGATAAAGGAAATTCTGGATGTAGGTGTTACCGCGAGGGATCTCAAGTGTACTGTCGAGCTAGTGCCTGCCGTGAAAGAGGACGAACAACGCCCGGCCGGGGAGGAGGAGGTGTGGCGTAAAACCAGCACGGAAGATGATTTTGAAGGTAAGCTTAAT]

[+] EMBL AL929707             [GCAAGAATCGNGCCCGAGGGTANGTTTACAAATGAAGCGAAAGTCGGTTTCCTAAGCTCGAAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATCCCCGACACGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAG CTTCGAAACATCTATAGATCATCGCCATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCTCTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTTCCGTGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX622026             [                                         AGTCGGTTTCCTAAGCTCGAAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATCCCCGACACGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCG CATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCTCTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTT CGTGGAGGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGG AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCGAGACGGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08VPO             [                                             GGTTTTCTAAGCTCAAAGCATACACACGAACATGCCAACGTGAACACAGCGCACATTTATGCAGTAGAAAGTCGCCATCCACGACACGTCACCGAAACACGACACGTCATTTGCCGGGGAAAACAAACTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTCAAACAGCTTTCGAAACATCTATAGATCATCG CATCTTGCTTGTTTGGACAAAATTACTGTGCGCATAGCGGCATCCAGGCTCCAGCATGGGTCGTTCGGTGTTGTGCGAATCGTT CGTGGAGGATTATCTGCGTCA CTCAGCCGTAAGG CGGAGTCTGCATGGGATTGCTGGTCGGACAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGCTAAATGCAACGGTGGCTGCGCA CACGCTTTGGATGCAACCCGAATGCTGCCCGGCGGCATGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTGATGGGCACGTGCGAGGAGCTAGAGAAGGGCGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTGTGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGG AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCGAGACGGACGAGGTGTACCCGTTGAAGCAACAGGCCGATCAGGAACAGTACGACACGGAGGCAAACTTGACGGAATGTGCCAAAAAGCTGAAAGGGCAGCTGATGGATGCGAAAATTCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX627304             [                                                             AGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATCCCCGACACGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCG CATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCTCTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTT CGTGGAGGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGG AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCGAGACGGACGANGTGTACCCGTTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX622368             [                                                                                                                    TTGCCATCCCCGACACGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCG CATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCTCTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTT CGTGGAGGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGGAAAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM592269             [                                                                                                                                                                            ccGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCG CATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCTCTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTT CGTGGAGGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCTGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGG AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCGAGACGGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX613221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCCGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGATAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCCGCCGTGCGACTGG AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTATTTCGAGACGGACGAGGTGTACCCGTTGAAGCAACAGGCCGACCAGGAACAGTACGACACGGAGGCAAACTTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08VPP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGCACGTGCGAGGAGCTAGAGAAGGGCGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTGTGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGCCGTGCGACTGG AAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCGAGACGGACGAGGTGTACCCGTTGAAGCAACAGGCCGATCAGGAACAGTACGACACGGAGGCAAACTTGACGGAATGTGCCAAAAAGCTGAAAGGGCAGCTGATGGATGCGAAAATTCTGTTCGATGGAGCGCCGAAGCTGGGCGCCGACACCGTGGAGGGTGTGCTGACGATGAAAAATCAAGATAAATTCCTGGCAAACGTCTATCTGCCGACGTCTGCCGAACTTACCGCGAGTGAGGCGAAAATAGAACAGTTCGAGGGTACGCTGAAATTCGACGGCATTGTCAGCTCACAGATTTACATACACTCGCGATGCACGTTCGCCGAAGCGGAACGCTTCATCGTCACCGACATCGTACGGTCGCTGATGTCGCGCATTCAAATCCACTGTGATTCACTGGTACAGACGGAGGACACGCCCCAGGACAAGATTACGCTGAACGAGTTGCCCCGCCGCGTGTACTTCCCGGTGCGCCAGGGTCCGGGCGGTTTTCCGGTAGAGTTCAGTGACTATCTGTTCCCGGAGGAAAGCGTCGAAACGCCGCTGGTGCGGATAAAGGAAATTCTGGATGTAGGTGTTACCGCGAGGGATCTCAAGTGTACTGTCGAGCTAGTGCCTGCCGTGAAAGAGGACGAACAACGCCCGGCCGGGGAGGAGGAGGTGTGGCGTAAAACCAGCACGGAAGATGATTTTGAAGGTAAGCTTAAT]




>consensus_8331#0
GCAAGAATCGNGCCCGAGGGTANGTTTACAAATGAAGCGAAAGTCGGTTTCCTAAGCTCG
AAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGC
CATCCCCGACACGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATT
CGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTA
TAGATCATCGCATCTTGCTCGTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGGCT
CTAGCATGGGTCGTTCGGTGTTGTGCGAATCGTTCGTGGAGGATTATCTGCGCCAGCTCA
GCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGG
ATTACATTGTCCACGCGAGCCGCATCACGGACGAAGAAACAGCGGACGATTCGCAAAAGC
TAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCGCATGCTGCCGGGCGGCA
TGTACGTGATGGGCATCTTTGTGATCCACCCGAAGAATGTGTTCCAAGAGCCGACCCTTC
TGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGC
TAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCG
GCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCGACCGTCCTGC
CGTGCGACTGGAAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTACTTCG
AGACGGACGAGGTGTACCCGTTGAAGCAACAGGCCGATCAGGAACAGTACGACACGGAGG
CAAACTTGACGGAATGTGCCAAAAAGCTGAAAGGGCAGCTGATGGATGCGAAAATTCTGT
TCGATGGAGCGCCGAAGCTGGGCGCCGACACCGTGGAGGGTGTGCTGACGATGAAAAATC
AAGATAAATTCCTGGCAAACGTCTATCTGCCGACGTCTGCCGAACTTACCGCGAGTGAGG
CGAAAATAGAACAGTTCGAGGGTACGCTGAAATTCGACGGCATTGTCAGCTCACAGATTT
ACATACACTCGCGATGCACGTTCGCCGAAGCGGAACGCTTCATCGTCACCGACATCGTAC
GGTCGCTGATGTCGCGCATTCAAATCCACTGTGATTCACTGGTACAGACGGAGGACACGC
CCCAGGACAAGATTACGCTGAACGAGTTGCCCCGCCGCGTGTACTTCCCGGTGCGCCAGG
GTCCGGGCGGTTTTCCGGTAGAGTTCAGTGACTATCTGTTCCCGGAGGAAAGCGTCGAAA
CGCCGCTGGTGCGGATAAAGGAAATTCTGGATGTAGGTGTTACCGCGAGGGATCTCAAGT
GTACTGTCGAGCTAGTGCCTGCCGTGAAAGAGGACGAACAACGCCCGGCCGGGGAGGAGG
AGGTGTGGCGTAAAACCAGCACGGAAGATGATTTTGAAGGTAAGCTTAAT

consensusID : consensus_8331#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 833
fasta sequence

                              [ATCCTAGCAGAATTCCCCGAGGTTAAGTGGGTTTCTAAGCTCGAAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATACCCCGACACGGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAANACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCGCATCTTGCTCGCTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGTGCTCTAGCATGGGTCGCTCGGCTGTTTGTGCGAATCGNTTCGCTGGCNGCGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGCAANAGGACTTACACTTGTCCACGCGAGCCGCATCACGGACGTAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGACGCTTTGGATGCACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTCTGTGATCCACCGAAGAATGTGTTCCAAGAGCCGACCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCCGACCGTCCTGCCGTGCGACTGGAAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTAC]

[+] EMBL AL933015             [ATCCTAGCAGAATTCCCCGAGGTTAAGTGGGTTTCTAAGCTCGAAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATACCCCGACACGGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAAANACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCGCATCTTGCTCGCTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGTGCTCTAGCATGGGTCGCTCGGCTGTTTGTGCGAATCGNTTCGCTGGCNGCGATTATCTGCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGCAANAGGACTTACACTTGTCCACGCGAGCCGCATCACGGACGTAAGAAACAGCGGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGACGCTTTGGATGCACCCGCATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTCTGTGATCCACCGAAGAATGTGTTCCAAGAGCCGACCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCCGACCGTCCTGCCGTGCGACTGGAAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTAC]




>consensus_8331#1
ATCCTAGCAGAATTCCCCGAGGTTAAGTGGGTTTCTAAGCTCGAAGCATTCACATGAACA
TGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGCCATACCCCGACACGGTC
ATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAATTCGTGAAAAAGAGTAA
ANACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACATCTATAGATCATCGCATC
TTGCTCGCTTTGGACAAAATTACTGTGCGCAAAGCGATATACAGTGCTCTAGCATGGGTC
GCTCGGCTGTTTGTGCGAATCGNTTCGCTGGCNGCGATTATCTGCGCCAGCTCAGCCGTA
AGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGCAANAGGACTT
ACACTTGTCCACGCGAGCCGCATCACGGACGTAAGAAACAGCGGACGATTCGCAAAAGCT
AAACGCAACGGTGGCTGCGCAGACGCTTTGGATGCACCCGCATGCTGCCGGGCGGCATGT
ACGTGATGGGCATCTTCTGTGATCCACCGAAGAATGTGTTCCAAGAGCCGACCTTCTGTC
CTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGTTCGATGCGAACCCGCTGCTAAT
GGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGGTGCTGCACTATTCGTCCGGCAG
CAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGGAAAATCCCGACCGTCCTGCCGT
GCGACTGGAAGTTTGTCGAGCGCCTAACGACCTGGCACAAGCTGAACGTGTAC

consensusID : consensus_8331#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence

                              [GCCCCAGGCTTTAACATGCCCACGTGAACACAGCGCACATTTATGCTGTAGAAAGTCGCCGTCCACGACACGTCACCGAAACACGACACGTCATTTGCCGGGGAAAACAAACTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCTTTCGAAACATCTATAGATCATCGCATCTTGCTCGTTTGGACAAAATTACTGTGCGCATAGCGGCATCCAGGCTCCAGCATGGGTCGTTCGGTAGTTGTGCGAATCGTTCGTGGAGGATTATCTGCGTCAGCTCAGCCGCAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCGATCACGGACGAAGAAACAGCGGACGATTCGC]

[+] EMBL AL697447             [GCCCCAGGCTTTAACATGCCCACGTGAACACAGCGCACATTTATGCTGTAGAAAGTCGCCGTCCACGACACGTCACCGAAACACGACACGTCATTTGCCGGGGAAAACAAACTGCAATTCGTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCTTTCGAAACATCTATAGATCATCGCATCTTGCTCGTTTGGACAAAATTACTGTGCGCATAGCGGCATCCAGGCTCCAGCATGGGTCGTTCGGTAGTTGTGCGAATCGTTCGTGGAGGATTATCTGCGTCAGCTCAGCCGCAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGGATTACATTGTCCACGCGAGCCGCGATCACGGACGAAGAAACAGCGGACGATTCGC]




>consensus_8331#2
GCCCCAGGCTTTAACATGCCCACGTGAACACAGCGCACATTTATGCTGTAGAAAGTCGCC
GTCCACGACACGTCACCGAAACACGACACGTCATTTGCCGGGGAAAACAAACTGCAATTC
GTGAAAAAGAGTAAAACTTGCAGCAGATGTTAGGTTTAAAACAGCTTTCGAAACATCTAT
AGATCATCGCATCTTGCTCGTTTGGACAAAATTACTGTGCGCATAGCGGCATCCAGGCTC
CAGCATGGGTCGTTCGGTAGTTGTGCGAATCGTTCGTGGAGGATTATCTGCGTCAGCTCA
GCCGCAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGCCGGCGGAAAGG
ATTACATTGTCCACGCGAGCCGCGATCACGGACGAAGAAACAGCGGACGATTCGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8331#0      GCAAGAATCGNGCCCGAGGGTANGTTTACAAATGAAGCGAAAGTCGGTTTCCTAAGCTCG 60
consensus_8331#1      -----------ATCCTAGCAGAATTCCCC----GAGGTTAAG--TGGGTTTCTAAGCTCG 43
consensus_8331#2      -------------------------------------------------------GCCCC 5
                                                                             ** * 

consensus_8331#0      AAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGC 120
consensus_8331#1      AAGCATTCACATGAACATGCCAACGTGACTACAGTCCACATTTATGCAGTAGAAAGTTGC 103
consensus_8331#2      AGGCTTT------AACATGCCCACGTGAACACAGCGCACATTTATGCTGTAGAAAGTCGC 59
                      * ** **      ******** ******  ****  *********** ********* **

consensus_8331#0      CAT-CCCCGACACG-TCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAA 178
consensus_8331#1      CATACCCCGACACGGTCATCGAAACACGACACGTCAATTGCCGGGGAAAACAATCTGCAA 163
consensus_8331#2      CGT-CCACGACACG-TCACCGAAACACGACACGTCATTTGCCGGGGAAAACAAACTGCAA 117
                      * * ** ******* *** ***************** **************** ******

consensus_8331#0      TTCGTGAAAAAGAGTAAAA-CTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACAT 237
consensus_8331#1      TTCGTGAAAAAGAGTAAANACTTGCAGCAGATGTTAGGTTTAAAACAGCCTTCGAAACAT 223
consensus_8331#2      TTCGTGAAAAAGAGTAAAA-CTTGCAGCAGATGTTAGGTTTAAAACAGCTTTCGAAACAT 176
                      ******************  ***************************** **********

consensus_8331#0      CTATAGATCATCGCATCTTGCTCG-TTTGGACAAAATTACTGTGCGCAAAGCGATATACA 296
consensus_8331#1      CTATAGATCATCGCATCTTGCTCGCTTTGGACAAAATTACTGTGCGCAAAGCGATATACA 283
consensus_8331#2      CTATAGATCATCGCATCTTGCTCG-TTTGGACAAAATTACTGTGCGCATAGCGGCATCCA 235
                      ************************ *********************** ****  ** **

consensus_8331#0      G-GCTCTAGCATGGGTCGTTCGGTG--TTGTGCGAATCGTTC----GTGGAGGATTATCT 349
consensus_8331#1      GTGCTCTAGCATGGGTCGCTCGGCTGTTTGTGCGAATCGNTTCGCTGGCNGCGATTATCT 343
consensus_8331#2      G-GCTCCAGCATGGGTCGTTCGGTAG-TTGTGCGAATCGTTC----GTGGAGGATTATCT 289
                      * **** *********** ****    ************ *     *     ********

consensus_8331#0      GCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGC 409
consensus_8331#1      GCGCCAGCTCAGCCGTAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGC 403
consensus_8331#2      GCGTCAGCTCAGCCGCAAGGCCGGAGTCTGCATGGGACTGCTGGTCGGGCAACCGTCGGC 349
                      *** *********** ********************************************

consensus_8331#0      CGGCGG--AAAGGA-TTACA-TTGTCCACGCGAGCCGC-ATCACGGACG-AAGAAACAGC 463
consensus_8331#1      CGGCGGCAANAGGACTTACACTTGTCCACGCGAGCCGC-ATCACGGACGTAAGAAACAGC 462
consensus_8331#2      CGGCGG--AAAGGA-TTACA-TTGTCCACGCGAGCCGCGATCACGGACG-AAGAAACAGC 404
                      ******  * **** ***** ***************** ********** **********

consensus_8331#0      GGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAGCACGCTTTGGATGCAACCCG 523
consensus_8331#1      GGACGATTCGCAAAAGCTAAACGCAACGGTGGCTGCGCAG-ACGCTTTGGATGCA-CCCG 520
consensus_8331#2      GGACGATTCGC------------------------------------------------- 415
                      ***********                                                 

consensus_8331#0      CATGCTGCCGGGCGGCATGTACGTGATGGGCATCTT-TGTGATCCACCCGAAGAATGTGT 582
consensus_8331#1      CATGCTGCCGGGCGGCATGTACGTGATGGGCATCTTCTGTGATCCACC-GAAGAATGTGT 579
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      TCCAAGAGCCGACCCTTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGT 642
consensus_8331#1      TCCAAGAGCCGACC-TTCTGTCCTCGATCAAGTTCATCCTGATGAGCATGAAGGCAACGT 638
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      TCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGG 702
consensus_8331#1      TCGATGCGAACCCGCTGCTAATGGGCACGTGCGAGGAGCTAGAGAAGGGTGAGAAGCTGG 698
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      TGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGG 762
consensus_8331#1      TGCTGCACTATTCGTCCGGCAGCAAAGCGCACGTATGCAAAACCGTTTCCCTGGCGGCGG 758
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      AAAATCC-GACCGTCCTGCCGTGCGACTGGAAGTTTGTCGAGCGCCTAACGACCTGGCAC 821
consensus_8331#1      AAAATCCCGACCGTCCTGCCGTGCGACTGGAAGTTTGTCGAGCGCCTAACGACCTGGCAC 818
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      AAGCTGAACGTGTACTTCGAGACGGACGAGGTGTACCCGTTGAAGCAACAGGCCGATCAG 881
consensus_8331#1      AAGCTGAACGTGTAC--------------------------------------------- 833
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      GAACAGTACGACACGGAGGCAAACTTGACGGAATGTGCCAAAAAGCTGAAAGGGCAGCTG 941
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      ATGGATGCGAAAATTCTGTTCGATGGAGCGCCGAAGCTGGGCGCCGACACCGTGGAGGGT 1001
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      GTGCTGACGATGAAAAATCAAGATAAATTCCTGGCAAACGTCTATCTGCCGACGTCTGCC 1061
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      GAACTTACCGCGAGTGAGGCGAAAATAGAACAGTTCGAGGGTACGCTGAAATTCGACGGC 1121
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      ATTGTCAGCTCACAGATTTACATACACTCGCGATGCACGTTCGCCGAAGCGGAACGCTTC 1181
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      ATCGTCACCGACATCGTACGGTCGCTGATGTCGCGCATTCAAATCCACTGTGATTCACTG 1241
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      GTACAGACGGAGGACACGCCCCAGGACAAGATTACGCTGAACGAGTTGCCCCGCCGCGTG 1301
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      TACTTCCCGGTGCGCCAGGGTCCGGGCGGTTTTCCGGTAGAGTTCAGTGACTATCTGTTC 1361
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      CCGGAGGAAAGCGTCGAAACGCCGCTGGTGCGGATAAAGGAAATTCTGGATGTAGGTGTT 1421
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      ACCGCGAGGGATCTCAAGTGTACTGTCGAGCTAGTGCCTGCCGTGAAAGAGGACGAACAA 1481
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      CGCCCGGCCGGGGAGGAGGAGGTGTGGCGTAAAACCAGCACGGAAGATGATTTTGAAGGT 1541
consensus_8331#1      ------------------------------------------------------------
consensus_8331#2      ------------------------------------------------------------
                                                                                  

consensus_8331#0      AAGCTTAAT 1550
consensus_8331#1      ---------
consensus_8331#2      ---------