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Anopheles gambiae
cluster # 8342 cluster # 8342       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8342#0 length = 2167 sequences # 7  
consensus_8342#1 length = 663 sequences # 1  
consensus_8342#2 length = 557 sequences # 1  
consensus_8342#3 length = 223 sequences # 1  

consensusID : consensus_8342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2167
fasta sequence
                              [CCGGGGGACGACGATGATGATGGTAGTAGAGGGGGTGTGCGCGTTATGCATCTTCAGAACGCGCGGAGAGATACGTTCGTTTTACCGTTGCGCGCGCTCGATTGTGAGCGAGTGAGAGGGGATTGTGGAAAGAGCACTAACTTATGTGTGAGAACAAAAAGGAGTAACGCTGTGTTTACTCCACTGGAAAGGCTCTGATGAACATATAATTAGTGACGACGTGGACGGCATCAAGGTGGTCATCAACTATGACTATCCGCAGCAGACGGAAGATTACGTGCACCGTATCGGACGTACCGGGCGCTCGAACGCAACCGGCGTGGCGTACACCTTCTTCACGATGGCCGAGCGCAAGCAGGCGCGCGAGCTGGTCAATATCCTGCGGGAAGCCAAGCAGGATATACCGTCCGAGCTGTTGCGCTGGAGCCAGACGGCCAGCGGCAGCGGCGGTAGCACCCGGCGCTACGGAACCTTCCGCGGCGGCAACGGCGGCTACGGCGGTGGTTACGGTGGCGGATATGGCGGTGGTGGCTACGGCGGCGGTTATGGTGGCGCGAAGCGACCGTACGAAAGCAGTAGCAGCAGCTACTCGAATGGCGGCGGCGGCGGCTATGGTGGCGCCAGCAGTAGTTACGATTCGCGATCCACCAAACACACCCGGTTCGACGATTAAGTGAAGTGTGCGGAGACACGACGCGAGTGGTGTGTGGGTGGTGTTGGGATGTGTGGGACACTCTCTCACACTCATCAACACACACACACGTACACACACACACTTCGTTGGATTTTGATTTTAACGTACAAGAAAAGAAACGTGCGCGCGTGGATCTGTAAATGCATTCATTTGCAATTAATTCCTTACGAATAGAAACTTAAGTTCAGTTTAGGACCACCTTTTTATGTTGCGCCCTATAACACCCCCCCCCCCCCTCTCCCCGCCACCGCTCGTTTGTTTCTTCGTGTTCCAGTTCTCTTTAGTTATTTTTATGATTATTGATATAATAACGCGCTTATTTTCGTTTTGAAAATCCCACTCCCGCGCGCCCCCTGTTATTATCCGATAGAGTTACTTTCTTTTAAATCCACATGCATAATATTACACAGCATTAATGAATTGGCGTTT-TTCAGGCGAGCGCCCAAATACCCACCCACCACCCACACTTACACATTTCATTTGACTTTAGTAAATCGGGTGATGATGATAGTGGTCACAGAATTATGTAAAAGCTAGGACACACCATCACCCAACCAACAACTCCTATATTACCTTTACCCCCCTCATGAGCATTACTTTCGATACACAGTATATGCAGTTAGTAGTGTGTGCGTGTGTGTAGTATGTGCGATAGAAAGAGAGAAGGGGGTACGCTTCTTCTGTCCACAGCACACACCGTCGCGTAGAATGAATCACCACCATCAAATTCAGGTGTGTGTGTGCGTAATTAAACGACAAACAAAAGAAAACACAGCAAGAATAAGAAAGAGCACACTATATTTAGAAGAAAAAAACAACAAAAGAAACTATTATTACTTTCTCTCAGGCAAGCA-AAGGTAAAGTAGACCATCATAATGCAGCTCAGTATAAAGTCGTAATGTATGTGTGTGTGCATGTATTTCTTAATATTATCAAACATTTTCTAAAGCGGGAAGTAAGAAAGAGAGAGAGGGAGAGAGATTAGTAGAAGCGCTACTAGCCAACAGAAGCATATGCGGAGGTTTTTGTTTTGTACTTCTTTTTTTTTTCTTATATTACTCTGTGATAAATGACTAAAGCGTGTGTGCGTTTTGCCCACTACACCACACACACCTGTATAACAACAGAAAATCATTACAACACGCGCGCAGCACATACAAATTCCGCGCAATGATGATGATGCCGCGCGCGCTTGCAACCGACGAGGATGTGTCCCACCGAAAGCGCCCCCACCCATTGGCTTTTTTAAATTAAGTGTTTGTTTGTCCCTTACGCGGGGGCAAGAACACAATGTCGTCTTTAAAAAGCGCACTATCCGCCGGCGCGGGGTAGGACACGTCATCGGAGTGTTGCGGTAAGATTATACCAACTCCATCAAGAACATCTGAACGCGCGCACGGCTGCTTTTGCAAAGTCCACGTTTACCCTGGAACTCTCGTTTCGCGTTGGCTTTGGTAGGAAAGGAGGCTGTAT]

[+] EMBL BM577665             [CCGGGGGACGACGATGATGATGGTAGTAGAGGGGGTGTGCGCGTTATGCATCTTCAGAACGCGCGGAGAGATACGTTCGTTTTACCGTTGCGCGCGCTCGATTGTGAGCGAGTGAGAGGGGATTGTGGAAAGAGCACTAACTTATGTGTGAGAACAAAAAGGAGTAACGCTGTGTTTACTCCACTGGAAAGGCTCTGATGAACATATAATTAGTGACGACGTGGACGGCATCAAGGTGGTCATCAACTATGACTATCCGCAGCAGACGGAAGATTACGTGCACCGTATCGGACGTACCGGGCGCTCGAACGCAACCGGCGTGGCGTACACCTTCTTCACGATGGCCGAGCGCAAGCAGGCGCGCGAGCTGGTCAATATCCTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM579473             [                                                                                                                           ccgGGAAAGAGCACTAACGTATGTGTGAGAACAAAAAGGAGTAACGCTGTGTTTACTCCACTGGAAAGGCTCTGATGAACATATAATTAGTGACGACGTGGACGGTATCAAGGTGGTCATCAACTATGACTATCCGCAGCAGACGGAAGATTACGTGCACCGTATCGGACGTACCGGGCGCTCGAACGCAACCGGCGTGGCGTACACCTTCTTCACGATGGCCGAGCGCAAGCAGGCGCGCGAGCTGGTCAACATCCTGCAGGAAGCCAAGCAGGATATACCGTCCGAGCTGTTGCGCTGGAGCCAGACGGCCAGCGGCAGCGGCGGTAGCACCCGGCGCTACGGAACCTTCCGCGGCGGCAACGGCGGCTACGGCGGTGGTTACGGTGGCGGATATGGCGGTGGTGGCTACGGCGGCGGTTATGGTGGCGCGAAGCGACCGTACGAAAGCAGTAGCAGCAGCTACTCGAATGGCGGCGGCGGCGGCTATGGTGGCGCCAGCAGTAGTTACGATTCGCGATCCACCAAACACACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX628819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTATGGTGGCGCGAAGCGACCGTACGAAAGCAGTAGCAGCAGCTACTCGAATGGCGGCGGCGGCGGCTATGGTGGCGCCAGCAGTAGTTACGACTCGCGATCCACCAAACACACCCGGTTCGACGATTAAGTGAAGTGTGCGGAGACACGACGCGAGTGGTGTGTGGGTGGTGTTGGGATGTGTGGGACACTCTCTCACACTCATCAACACACACACACGTACACACACACACTTCGTTGGATTTTGATTTTAACGTACAAGAAAAGAAACGTGCGCGCGTGGATCTGTAAATGCATTCATTTGCAATTAATTCCTTACGAATAGAAACTTAAGTTCAGTTTAGGACCACCTTTTTATGTTGCGCCCTATAACACCCCCCCCCCCCCTCTCCCCGCCACCGCTCGTTTGTTTCTTCGTGTTCCAGTTCTCTTTAGTTATTTTTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08FJK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCACCGCTCGTTTGTTTCTTCGTGTTCCAGTTCTCTTTAGTTATTTTTATGATTATTGATATAATAACGCGCTTATTTTCGTTTTGAAAATCCCACTCCCGCGCGCCCCCTGTTATTATCCGATAGAGTTACTTTCTTTTAAATCCACATGCATAATATTACACAGCATTAATGAATTGGCGTTT TTCAGGCGAGCGCCCAAATACCCACCCACCACCCACACTTACACATTTCATTTGACTTTAGTAAATCGGGTGATGATGATAGTGGTCACAGAATTATGTAAAAGCTAGGACACACCATCACCCAACCAACAACTCCTATATTACCTTTACCCCCCTCATGAGCATTACTTTCGATACACAGTATATGCAGTTAGTAGTGTGTGCGTGTGTGTAGTATGTGCGATAGAAAGAGAGAAGGGGGTACGCTTCTTCTGTCCACAGCACACACCGTCGCGTAGAATGAATCACCACCATCAAATTCAGGTGTGTGTGTGCGTAATTAAACGACAAACAAAAGAAAACACAGCAAGAATAAGAAAGAGCACACTATATTTAGAAGAAAAAAACAACAAAAGAAACTATTATTACTTTCTCTCAGGCAAGCAGAAGGTAAAGTAGACCATCATAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM602300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGATATTTTTATGATTATTGATATAATAACGCGCTTATTTTCGTTTTGAAAATTCCACTCCCGCGCGCCGTCTGTTATTATCCGAGAGGGTAACTTTCTTTTAAATCCACATGCATAATATTACGCAGCATTAATGAATTGGCGTTTGTTCAGGCGAGCGCCCAAATACCCACCCACCACCCACGCTTTCACATTTCATTTGACTTTAGTAAATCGGGTGATGATGATAGTGGTCACAGAATTATGTAAAAGCTAGGACACACCATCACCCAACCAACAACTCCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM638857             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACAACAAAAGAAACTATTATTACTTTCTCTCAGGCAAGCA AAGGTAAAGTAGACCATCATAATGCAGCTCAGTATAAAGTCGTAATGTATGTGTGTGTGCATGTATTTCTTAATATTATCAAACATTTTCTAAAGCGGGAAGTAAGAAAGAGAGAGAGGGAGAGAGATTAGTAGAAGCGCTACTAGCCAACAGAAGCATATGCGGAGGTTTTTGTTTTGTACTTCTTTTTTTTTTCTTATATTACTCTGTGATAAATGACTAAAGCGTGTGTGCGTTTTGCCCACTACACCACACACACCTGTATAACAACAGAAAATCATTACAACACGCGCGCAGCACATACAAATTCCGCGCAATGATGATGATGCCGCGCGCGCTTGCAACCGACGAGGATGTGTCCCACCGAAAGCGCCCCCACCCATTGGCTTTTTTAAATTAAGTGTTTGTTTGTCCCTTACGCGGGGGCAAGAACACAATGTCGTCTTTAAAAAGCGCACTATCCGCCGGCGCGGGGTAGGACACGTCATCGGAGTGTTGCGGTAAGATTATACCAACTCCATCAAGAACATCTGAACGCGCGCACGGCTGCTTTTGCAAAGTCCACGTT                                                   ]
[+] EMBL BM595928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACAAAAGAAACTATTATTACTTTCTCTCAGGCAAGCA AAGGTAAAGTAGACCATCATAATGCAGCTCAGTATAAAGTCGTAATGTATGTGTGTGTGCATGTATTTCTTAATATTATCAAACATTTTCTAAAGCGGGAAGTAAGAAAGAGAGAGAGGGAGAGAGATTAGTAGAAGCGCTACTAGCCAACAGAAGCATATGCGGAGGTTTTTGTTTTGTACTTCTTTTTTTTTTCTTATATTACTCTGTGATAAATGACTAAAGCGTGTGTGCGTTTTGCCCACTACACCACACACACCTGTATAACAACAGAAAATCATTACAACACGCGCGCAGCACATACAAATTCCGCGCAATGATGATGATGCCGCGCGCGCTTGCAACCGACGAGGATGTGTCCCACCGAAAGCGCCCCCACCCATTGGCTTTTTTAAATTAAGTGTTTGTTTGTCCCTTACGCGGGGGCAAGAACACAATGTCGTCTTTAAAAAGCGCACTATCCGCCGGCGCGGGGTAGGACACGTCATCGGAGTGTTGCGGTAAGATTATACCAACTCCATCAAGAACATCTGAACGCGCGCACGGCTGCTTTTGCAAAGTCCACGTTTACCCTGGAACTCTCGTTTCGCGTTGGCTTTGGTAGGAAAGGAGGCTGTAT]


>consensus_8342#0 CCGGGGGACGACGATGATGATGGTAGTAGAGGGGGTGTGCGCGTTATGCATCTTCAGAAC GCGCGGAGAGATACGTTCGTTTTACCGTTGCGCGCGCTCGATTGTGAGCGAGTGAGAGGG GATTGTGGAAAGAGCACTAACTTATGTGTGAGAACAAAAAGGAGTAACGCTGTGTTTACT CCACTGGAAAGGCTCTGATGAACATATAATTAGTGACGACGTGGACGGCATCAAGGTGGT CATCAACTATGACTATCCGCAGCAGACGGAAGATTACGTGCACCGTATCGGACGTACCGG GCGCTCGAACGCAACCGGCGTGGCGTACACCTTCTTCACGATGGCCGAGCGCAAGCAGGC GCGCGAGCTGGTCAATATCCTGCGGGAAGCCAAGCAGGATATACCGTCCGAGCTGTTGCG CTGGAGCCAGACGGCCAGCGGCAGCGGCGGTAGCACCCGGCGCTACGGAACCTTCCGCGG CGGCAACGGCGGCTACGGCGGTGGTTACGGTGGCGGATATGGCGGTGGTGGCTACGGCGG CGGTTATGGTGGCGCGAAGCGACCGTACGAAAGCAGTAGCAGCAGCTACTCGAATGGCGG CGGCGGCGGCTATGGTGGCGCCAGCAGTAGTTACGATTCGCGATCCACCAAACACACCCG GTTCGACGATTAAGTGAAGTGTGCGGAGACACGACGCGAGTGGTGTGTGGGTGGTGTTGG GATGTGTGGGACACTCTCTCACACTCATCAACACACACACACGTACACACACACACTTCG TTGGATTTTGATTTTAACGTACAAGAAAAGAAACGTGCGCGCGTGGATCTGTAAATGCAT TCATTTGCAATTAATTCCTTACGAATAGAAACTTAAGTTCAGTTTAGGACCACCTTTTTA TGTTGCGCCCTATAACACCCCCCCCCCCCCTCTCCCCGCCACCGCTCGTTTGTTTCTTCG TGTTCCAGTTCTCTTTAGTTATTTTTATGATTATTGATATAATAACGCGCTTATTTTCGT TTTGAAAATCCCACTCCCGCGCGCCCCCTGTTATTATCCGATAGAGTTACTTTCTTTTAA ATCCACATGCATAATATTACACAGCATTAATGAATTGGCGTTTTTCAGGCGAGCGCCCAA ATACCCACCCACCACCCACACTTACACATTTCATTTGACTTTAGTAAATCGGGTGATGAT GATAGTGGTCACAGAATTATGTAAAAGCTAGGACACACCATCACCCAACCAACAACTCCT ATATTACCTTTACCCCCCTCATGAGCATTACTTTCGATACACAGTATATGCAGTTAGTAG TGTGTGCGTGTGTGTAGTATGTGCGATAGAAAGAGAGAAGGGGGTACGCTTCTTCTGTCC ACAGCACACACCGTCGCGTAGAATGAATCACCACCATCAAATTCAGGTGTGTGTGTGCGT AATTAAACGACAAACAAAAGAAAACACAGCAAGAATAAGAAAGAGCACACTATATTTAGA AGAAAAAAACAACAAAAGAAACTATTATTACTTTCTCTCAGGCAAGCAAAGGTAAAGTAG ACCATCATAATGCAGCTCAGTATAAAGTCGTAATGTATGTGTGTGTGCATGTATTTCTTA ATATTATCAAACATTTTCTAAAGCGGGAAGTAAGAAAGAGAGAGAGGGAGAGAGATTAGT AGAAGCGCTACTAGCCAACAGAAGCATATGCGGAGGTTTTTGTTTTGTACTTCTTTTTTT TTTCTTATATTACTCTGTGATAAATGACTAAAGCGTGTGTGCGTTTTGCCCACTACACCA CACACACCTGTATAACAACAGAAAATCATTACAACACGCGCGCAGCACATACAAATTCCG CGCAATGATGATGATGCCGCGCGCGCTTGCAACCGACGAGGATGTGTCCCACCGAAAGCG CCCCCACCCATTGGCTTTTTTAAATTAAGTGTTTGTTTGTCCCTTACGCGGGGGCAAGAA CACAATGTCGTCTTTAAAAAGCGCACTATCCGCCGGCGCGGGGTAGGACACGTCATCGGA GTGTTGCGGTAAGATTATACCAACTCCATCAAGAACATCTGAACGCGCGCACGGCTGCTT TTGCAAAGTCCACGTTTACCCTGGAACTCTCGTTTCGCGTTGGCTTTGGTAGGAAAGGAG GCTGTAT



consensusID : consensus_8342#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence
                              [CCGCGGACGCGTGGGCGGATCTGACCGTAGCTTCGCTATCCAGAACTACCCGATCGAAAGCGAATACGCCCGTTACTTCTTCTCCGTCCACCCCGACTTTGACTACTACGAGCGCATGTTCAACTACGCTTACCGCGGAAACTACCATCCATCTTGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGCCTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTACGAATACAACTGGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACAACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTACAACATCGATATCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCCACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAA]

[+] EMBL BM595126             [CCGCGGACGCGTGGGCGGATCTGACCGTAGCTTCGCTATCCAGAACTACCCGATCGAAAGCGAATACGCCCGTTACTTCTTCTCCGTCCACCCCGACTTTGACTACTACGAGCGCATGTTCAACTACGCTTACCGCGGAAACTACCATCCATCTTGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGCCTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTACGAATACAACTGGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACAACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTACAACATCGATATCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCCACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAA]


>consensus_8342#1 CCGCGGACGCGTGGGCGGATCTGACCGTAGCTTCGCTATCCAGAACTACCCGATCGAAAG CGAATACGCCCGTTACTTCTTCTCCGTCCACCCCGACTTTGACTACTACGAGCGCATGTT CAACTACGCTTACCGCGGAAACTACCATCCATCTTGCGCTGTGTCGAACAAATTCGTCAA CACCTTCGATGGAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCA CACCGTCAAGCCTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTA CGAATACAACTGGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCA CGGCGAGGACAACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTA CAACATCGATATCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCC CCAGCAGATCCACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCA GCCGCTGATCCGCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGA CGACATCAAGATCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTT CAA



consensusID : consensus_8342#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence
                              [CCGCGGACGCGTGGGTCGCCATGGTTCCATGGCTTTCTACCCGAAGAAGCGTGCTTCGCGCCACCAGGGTCGCGTGAAGGCGTTCCCTAAGGACGATGCTTCCAAGCCGGTGCATTTGACCGCGTTCCTGGCGTACAAGGCTGGCATGACGCACATCGTGCGTGAAGCCGACCGTCCAGGTTCAAAAATTAACAAGAAGGAGGTCGTGGAAGCGGTCACGATTCTCGAAACTCCGCCACTGGTGGTTGTTGGTGCCGTCGGCTACATCGAAACGCCGTTCGGACCGCGTGCTCTGTGCAACGTCTGGGCCCAGCATCTGTCTGAGGAGTGCCGTCGTCGCTTCTACAAGAACTGGCACGCGAGCAAGAAGAAGGCCTTCACCAAGGCCTCGAAGAAGTGGACCGACGATCTGGGCAAGAAGTCGATTGAGGACACCTTCAAGAAGATGGTCCGCTACTGCAAGTTCATCCGTGTCATCGCACACTCGCAGATTCGTCTGATCAAGCAGGGTCAGAAGAAGGCTCACATCATCGAGATCCAGCTTGAACGGTGGTTCC]

[+] EMBL BM615918             [CCGCGGACGCGTGGGTCGCCATGGTTCCATGGCTTTCTACCCGAAGAAGCGTGCTTCGCGCCACCAGGGTCGCGTGAAGGCGTTCCCTAAGGACGATGCTTCCAAGCCGGTGCATTTGACCGCGTTCCTGGCGTACAAGGCTGGCATGACGCACATCGTGCGTGAAGCCGACCGTCCAGGTTCAAAAATTAACAAGAAGGAGGTCGTGGAAGCGGTCACGATTCTCGAAACTCCGCCACTGGTGGTTGTTGGTGCCGTCGGCTACATCGAAACGCCGTTCGGACCGCGTGCTCTGTGCAACGTCTGGGCCCAGCATCTGTCTGAGGAGTGCCGTCGTCGCTTCTACAAGAACTGGCACGCGAGCAAGAAGAAGGCCTTCACCAAGGCCTCGAAGAAGTGGACCGACGATCTGGGCAAGAAGTCGATTGAGGACACCTTCAAGAAGATGGTCCGCTACTGCAAGTTCATCCGTGTCATCGCACACTCGCAGATTCGTCTGATCAAGCAGGGTCAGAAGAAGGCTCACATCATCGAGATCCAGCTTGAACGGTGGTTCC]


>consensus_8342#2 CCGCGGACGCGTGGGTCGCCATGGTTCCATGGCTTTCTACCCGAAGAAGCGTGCTTCGCG CCACCAGGGTCGCGTGAAGGCGTTCCCTAAGGACGATGCTTCCAAGCCGGTGCATTTGAC CGCGTTCCTGGCGTACAAGGCTGGCATGACGCACATCGTGCGTGAAGCCGACCGTCCAGG TTCAAAAATTAACAAGAAGGAGGTCGTGGAAGCGGTCACGATTCTCGAAACTCCGCCACT GGTGGTTGTTGGTGCCGTCGGCTACATCGAAACGCCGTTCGGACCGCGTGCTCTGTGCAA CGTCTGGGCCCAGCATCTGTCTGAGGAGTGCCGTCGTCGCTTCTACAAGAACTGGCACGC GAGCAAGAAGAAGGCCTTCACCAAGGCCTCGAAGAAGTGGACCGACGATCTGGGCAAGAA GTCGATTGAGGACACCTTCAAGAAGATGGTCCGCTACTGCAAGTTCATCCGTGTCATCGC ACACTCGCAGATTCGTCTGATCAAGCAGGGTCAGAAGAAGGCTCACATCATCGAGATCCA GCTTGAACGGTGGTTCC



consensusID : consensus_8342#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 223
fasta sequence
                              [TTTTTCACGGTTAAAAGCGGCAGTCTTCGCACTGTTTGCACTCCTCTTGAATGCTATTATCTGTCAGTTCCTTTCTCTTTTCTAGCAACTTGGTGTGTTCCTTCGGGTGGAATCGAATTTTGGCAACGAAATACATATCAATGACTAGGGCGAAAGTCAGGGGGGGGGGGGTGTTTGAGAATTTTTGGAGATTCTGGAAGATGGCATTTGGCTTGGTTTAGAA]

[+] EMBL CNS08CV9             [TTTTTCACGGTTAAAAGCGGCAGTCTTCGCACTGTTTGCACTCCTCTTGAATGCTATTATCTGTCAGTTCCTTTCTCTTTTCTAGCAACTTGGTGTGTTCCTTCGGGTGGAATCGAATTTTGGCAACGAAATACATATCAATGACTAGGGCGAAAGTCAGGGGGGGGGGGGTGTTTGAGAATTTTTGGAGATTCTGGAAGATGGCATTTGGCTTGGTTTAGAA]


>consensus_8342#3 TTTTTCACGGTTAAAAGCGGCAGTCTTCGCACTGTTTGCACTCCTCTTGAATGCTATTAT CTGTCAGTTCCTTTCTCTTTTCTAGCAACTTGGTGTGTTCCTTCGGGTGGAATCGAATTT TGGCAACGAAATACATATCAATGACTAGGGCGAAAGTCAGGGGGGGGGGGGTGTTTGAGA ATTTTTGGAGATTCTGGAAGATGGCATTTGGCTTGGTTTAGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CCGGGGGACGACGATGATGATGGTAGTAGAGGGGGTGTGCGCGTTATGCATCTTCAGAAC 60
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GCGCGGAGAGATACGTTCGTTTTACCGTTGCGCGCGCTCGATTGTGAGCGAGTGAGAGGG 120
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GATTGTGGAAAGAGCACTAACTTATGTGTGAGAACAAAAAGGAGTAACGCTGTGTTTACT 180
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CCACTGGAAAGGCTCTGATGAACATATAATTAGTGACGACGTGGACGGCATCAAGGTGGT 240
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CATCAACTATGACTATCCGCAGCAGACGGAAGATTACGTGCACCGTATCGGACGTACCGG 300
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GCGCTCGAACGCAACCGGCGTGGCGTACACCTTCTTCACGATGGCCGAGCGCAAGCAGGC 360
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GCGCGAGCTGGTCAATATCCTGCGGGAAGCCAAGCAGGATATACCGTCCGAGCTGTTGCG 420
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CTGGAGCCAGACGGCCAGCGGCAGCGGCGGTAGCACCCGGCGCTACGGAACCTTCCGCGG 480
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CGGCAACGGCGGCTACGGCGGTGGTTACGGTGGCGGATATGGCGGTGGTGGCTACGGCGG 540
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CGGTTATGGTGGCGCGAAGCGACCGTACGAAAGCAGTAGCAGCAGCTACTCGAATGGCGG 600
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CGGCGGCGGCTATGGTGGCGCCAGCAGTAGTTACGATTCGCGATCCACCAAACACACCCG 660
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GTTCGACGATTAAGTGAAGTGTGCGGAGACACGACGCGAGTGGTGTGTGGGTGGTGTTGG 720
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GATGTGTGGGACACTCTCTCACACTCATCAACACACACACACGTACACACACACACTTCG 780
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------CCGCGGACGCGTGGGCGGATCTGACCGTAGCTTCGC 36
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      TTGGATTTTGATTTTAACGTACAAGAAAAGAAACGTGCGCGCGTGGATCTGTAAATGC-- 838
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      TATCCAGAACTACCCGATCGAAAGCGAATACGCCCGTTACTTCTTCTCCGTCCACCCCGA 96
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      -ATTCATTTGCAATTAATTCCTTACGAATAGAAACTTAAGTTCAGTTTAGGACCACCTTT 897
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      CTTTGACTACTACGAGCGCATGTTCAACTACGCTTACCGCGGAAACTACCATCCATCTTG 156
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      TTATGTTGCGCCCTATAACACCCCCCCCCCCCCTCTCCCCGCCACCGCTCGTTTGTTTCT 957
consensus_8342#2      ------------------------------------------CCGCGGACGCGTGGGTCG 18
                                                                                  

consensus_8342#1      CGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTA-TGAGCTTG 215
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      TCGTGTTCCAGTT---CTCTTTAGTTATTTTTATGATTATTGATATAATAA-CGCGCTTA 1013
consensus_8342#2      CCATGGTTCCATGGCTTTCTACCCGAAGAAGCGTGCTTCGCGCCACCAGGGTCGCGTGAA 78
                                                                                  

consensus_8342#1      GCAACTGCTGGCATGTTGTGCTGCACACC-GTCAAGCCTGACTACTATTTCTACGCCCAG 274
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      TTTTCGTTTTGAAAATCCCACTCCCGCGC-GCCCCCTGTTATTATCCGATAGAGTTACTT 1072
consensus_8342#2      GGCGTTCCCTAAGGACGATGCTTCCAAGCCGGTGCATTTGACCGCGTTCCTGGCGTACAA 138
                                                                                  

consensus_8342#1      GACTCGCACTTCATGAAC-TCGGACTACG--AATACAACTGGAAGAACGGCTTCGGAGAG 331
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      TCTTTTAAATCCACATGCATAATATTACAC-AGCATTAATGAATTGGCGTTTTTCAGGCG 1131
consensus_8342#2      GGCTGGCATGACGCACATCGTGCGTGAAGCCGACCGTCCAGGTTCAAAAATTAACAAGAA 198
                                                                                  

consensus_8342#1      GATGAGCAGATCACCATCC-TGG--CCCGTCACGGCGAGGACAACCAGCTCTTCTTGA-- 386
consensus_8342#3      ---------------------------------------------------TTTTTCA-- 7
consensus_8342#0      AGCGCCCAAATACCCACCCACCA--CCCACACTTACACATTTCATTTGACTTTAGTAAAT 1189
consensus_8342#2      GGAGGTCGTGGAAGCGGTCACGATTCTCGAAACTCCGCCACTGGTGGTTGTTGGTGCCGT 258
                                                                         *        

consensus_8342#1      AGGCTA-TCCTTGGCCAG-TACAAGCAGAACGACTACAACATCGAT--AT--CATCCCCC 440
consensus_8342#3      CGGTTA-AAAGCGGCAGTCTTCGCACTGTTTGCACTCCTCTTGAAT--GC--TATTATCT 62
consensus_8342#0      CGGGTG-ATGATGATAGTGGTCACAGAATTATGTAAAAGCTAGGAC--ACACCATCACCC 1246
consensus_8342#2      CGGCTACATCGAAACGCCGTTCGGACCGCGTGCTCTGTGCAACGTCTGGGCCCAGCATCT 318
                       ** *                *                 *             *    * 

consensus_8342#1      A-CGGACACGAGCTCCC-GATGGTCTACAT-CAATGGCAAG--CCCCAGCAGATCCACGA 495
consensus_8342#3      G-TCAGTTC---CTTTC-TCTTTTCTAGCA-ACTTGGTGTG--TTCCTTCGGGTGGAATC 114
consensus_8342#0      AACCAACAACTCCTATA-TTACCTTTACCC-CCCTCATGAGCATTACTTTCGATACACAG 1304
consensus_8342#2      GTCTGAGGAGTGCCGTCGTCGCTTCTACAAGAACTGGCACGCGAGCAAGAAGAAGGCCTT 378
                                  *          * **       *     *          *        

consensus_8342#1      GAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGT 555
consensus_8342#3      GAATTTTGGCAACGAAATACATATCAATGACTAGGGCGAAAGTCAGGGGGGGGGGGGTGT 174
consensus_8342#0      TATATGCAGTTA-GTAGTGTGTGCGTGTGTGTAGTATGTGCGATAGAAAGAGAGAAGGGG 1363
consensus_8342#2      CACCAAGGCCTCGAAGAAGTGGACCGACGATCTGGGCAAGAAGTCGATTGAGGACACCTT 438
                       *                          *                *     *        

consensus_8342#1      CTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGT 615
consensus_8342#3      TTGAGAATT-TTTGGAGATT--CTGGAAGATGGCATTTGGCTTGGT----TTAGAA---- 223
consensus_8342#0      GTACGCTTCTTCTGTCCACA--GCACACACCGTCGCGTAGAATGAAT-CACCACCATCAA 1420
consensus_8342#2      CAAGAAGATGGTCCGCTACT----GCAAGTTCATCCGTGTCATCGCACACTCGCAGATTC 494
                                       *        *               *                 

consensus_8342#1      GTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAA------------ 663
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      ATTCAGGTGTGTGTGTGCGTAATTAAACGACAAACAAAAGAAAACACAGCAAGAATAAGA 1480
consensus_8342#2      GTCTGATCAAGCAGGGTCAGAAGAAGGCTCACATCATCGAGATCCAGCTTGAACGGTGGT 554
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      AAGAGCACACTATATTTAGAAGAAAAAAACAACAAAAGAAACTATTATTACTTTCTCTCA 1540
consensus_8342#2      TCC--------------------------------------------------------- 557
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GGCAAGCAAAGGTAAAGTAGACCATCATAATGCAGCTCAGTATAAAGTCGTAATGTATGT 1600
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GTGTGTGCATGTATTTCTTAATATTATCAAACATTTTCTAAAGCGGGAAGTAAGAAAGAG 1660
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      AGAGAGGGAGAGAGATTAGTAGAAGCGCTACTAGCCAACAGAAGCATATGCGGAGGTTTT 1720
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      TGTTTTGTACTTCTTTTTTTTTTCTTATATTACTCTGTGATAAATGACTAAAGCGTGTGT 1780
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GCGTTTTGCCCACTACACCACACACACCTGTATAACAACAGAAAATCATTACAACACGCG 1840
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CGCAGCACATACAAATTCCGCGCAATGATGATGATGCCGCGCGCGCTTGCAACCGACGAG 1900
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GATGTGTCCCACCGAAAGCGCCCCCACCCATTGGCTTTTTTAAATTAAGTGTTTGTTTGT 1960
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      CCCTTACGCGGGGGCAAGAACACAATGTCGTCTTTAAAAAGCGCACTATCCGCCGGCGCG 2020
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GGGTAGGACACGTCATCGGAGTGTTGCGGTAAGATTATACCAACTCCATCAAGAACATCT 2080
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ------------------------------------------------------------
consensus_8342#3      ------------------------------------------------------------
consensus_8342#0      GAACGCGCGCACGGCTGCTTTTGCAAAGTCCACGTTTACCCTGGAACTCTCGTTTCGCGT 2140
consensus_8342#2      ------------------------------------------------------------
                                                                                  

consensus_8342#1      ---------------------------
consensus_8342#3      ---------------------------
consensus_8342#0      TGGCTTTGGTAGGAAAGGAGGCTGTAT 2167
consensus_8342#2      ---------------------------
                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)