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Anopheles gambiae
cluster # 8356 cluster # 8356       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8356#0 length = 1564 sequences # 8  
consensus_8356#1 length = 674 sequences # 1  
consensus_8356#2 length = 213 sequences # 1  

consensusID : consensus_8356#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1564
fasta sequence
                              [CCGGAAGCGTGGTTGTTGCAGTGAATTCGAATGAAAAATAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAG-TGGTGCGAACG-GTGGTAGACGATCTGTTCGCATCG-ATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTCGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCGAAACCGTCCGACGGCGGTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTG-CCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGACCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATCTGCGGCA-CGCTGCGAACGTAAGTCGCAGAACGT-GG-AAATGCTGCGCTATCTCGACCAGTACATCTCGGTGATGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCGGCCAGTTTACCGTGAACGTGAAGCGCATCTTCGAGCAGCTGACGTGGGCCTGCATCGAGAACATTATCGTGGAAAAGTATGGCTCGAAGGCGGCCCGCATCTTTCGGGTCGTGCGCATGAAGAAGTATGTGGAGCAGGAGGACATCCAGAAGGAAGCGATGGTGCCGGCGAAGGACGCAAAGCTGCTGACGTACAAGCTGCTGGAGGAGAACTTTTTGCAGATTCAAACGTTCCGCAAACCGGGCGGTGGAAATTCCGGTGCACCGAAGTCGTTTTTCTTGTTCTACGTCAACCAGCCGCAGATTGTGTCGATGCTGCTGGAGCTCAGCTACAAGGCGCTGTACAACTCGATCACGCGCCTCACGCACGATAAGACGGTGAACAAGCGGTTGATCGAAAAGAGCCAGCGGTTGGAGAGTATTGTTGAGACGATGAAGGAACGGGGCGAGTCGGAAGCGTACATTAACGAGATCCTGGAGACGCTCACACCGCCGGAGCAGGAAATATTGGCCAAGGTGAACGGCGCGTGAAAAGTCTGTACAGCGCGGAGATCGGAATCGACGAAACCATCTTCATGCTGAAACTGTACCAGGAATATCAGAAATAAA]

[+] EMBL CNS08YPA             [CCGGAAGCGTGGTTGTTGCAGTGAATTCGAATGAAAAATAAAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAG TGGTGCGAACGCGTGGTAGACGATCTGTTCGCATCG ATCGCGAAACCCTTGTCGCAAATAATACGATCGACTGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATTCTGATCAAGTTCAATATGGTAGGATTCTCGCTAAACAAAGCCCGCACCGGGTACGAGTATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTCGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGGAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCGAAACCGTCCGACGGCGGTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTG CCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGACCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATCTGCGGCA CGCTGCGAACGTAAGTCGCAGAACGT GG AAATGCTGCGCTATCTCGACCAGTACATCTCGGTGATGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCGGCCAGTTTACCGTGAACGTGAAGCGCATCTTCGAGCAGCTGACGTGGGCCTGCATCGAGAACATTATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX627632             [      GCGTGGTTGTTGCAGTGAATTCGAATGAAAAATAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAG TGGTGCGAACG GTGGTAGACGATCTGTTCGCATCG ATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTTGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCAAAACCGTCCGACGGTGGTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAACCCGGTCAAGGTG CCGGACGAng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08N1B             [       CGTGGTTGTTGCGGTGAATTCGAATGAAAAATAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAG TGGTAAGAACG GTGGTAGACGATCTGTTCGCATCG ATCGCG AAGCCTTGTCGCAAATAATACGGTCGACCGGATTGTCCAAATCAGAGGTATGCAAATCATTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTCGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCGAAACCGTCCGACGGCGGTG CGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCTGTCAAGGTGCCCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGACCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08VKF             [          GGTTGTTGCAGTGAATTCGAATGAAAAATAAAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAGCTGGTGCGAACG GTGGTAGACGATCTGTTCGCATCG ATCGCGAAACCCTTGTCGCAAATAATACGATCGACTGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATTCTGATCAAGTTCAATATGGTAGGATTCTCGCTAAACAAAGCCCGCACCGGGTACGAGTATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTCGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGGAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCGAAACCGTCCGACGGCGGTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTG CCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGACCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATCTGCGGCA CGCTGCGAACGTAAGTTGCAGAACGT GG AAATGCTGCGCTATCTCGACCAGTACATCTCGGTGATGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX627696             [            TTGTTGCAGTGAATTNNAATGAAAAATAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAG TGGNGCGAACG GTGGTAGACGATCTGTTCGCATCGAATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATCCTGATCAANTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGTACGAATATCGGNTGCNTTACGATCGCATAGTGATGGTATTGCGCTATCCCCNCTACGTGCACCTGATACAGACAAAGTTTGGCCACGANTCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGNCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAAGGACAAATTCGCAGACCTNGCGCAAGAAAACTACATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08YPB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTG CCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGACCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATCTGCGGCAGCGCTGCGAACGTAAGTCGCAGAACGT GGAAAATG TGCGCTATCTCGACCAGTACATCTCGGTGATGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCGGCCAGTTTACCGTGAACGTGAAGCGCATCTTCGAGCAGCTGACGTGGGCCTGCATCGAGAACATTATCGTGGAAAAGTATGGCTCGAAGGCGGCCCGCATCTTTCGGGTCGTGCGCATGAAGAAGTATGTGGAGCAGGAGGACATCCAGAAGGAAGCGATGGTGCCGGCGAAGGACGCAAAGCTGCTGACGTACAAGCTGCTGGAGGAGAACTTTTTGCAGATTCAAACGTTCCGCAAACCGGGCGGTGGAAATTCCGGTGCACCGAAGTCGTTTTTCTTGTTCTACGTCAACCAGCCGCAGATTGTGTCGATGCTGCTGGAGCTCAGCTACAAGGCGCTGTACAACTCGATCACGCGCCTCACGCACGATAAGACGGTGAACAAGCGGTTGATCGAAAAGAGCCAGCGGTTGGAGAGTATTGTTGAGACGATGAAGGAACGGGGCGAGTCGGAAGCGTACATTAACGAGATCCTGGAGACGCTCACACCGCCGGAGCAGGAAATATTGGCCAAGGTGAACTGCGCGTGAAAAGTCTGTACAGCGCGGAGATCGGAATCGACGAAACCATCTTCATGCTGAAACTGTACCAGGAATATCAGAAATAAA]
[-] EMBL CNS08N1C             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGGTGACCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATCTGCGGCAGCGCTGCGAACGAAAGTCGCAGAACGTAGA AAATG TGCGCTATCTCGACCAGTATATCTCGGTGATGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCGGCCAGTTTACCGTGAACGTGAAGCGCATCTTCGAGCAGCTGACGTGGGCCTGCATCGAGAACATTATCGTGGAAAAGTATGGCTCGAAGGCGGCCCGCATCTTTCGGGTAGTGCGCATGAAGAAGTACGTGGAGCAGGCGGACATTCAGAAGGAAGCGATGGTGCCGGCGAAGGACGCAAAGCTGCTGACGTACAAGCTGCTGGAGGAGAACTTTTTGCAGATTCAAACGTTCCGCAAACCGGGCGGTGGAAATTCCGGTGCACCGAAGTCGTTTTTCTTGTTCTACGTCAACCAGCCGCAGATTGTGTCGATGCTGCTGGAGCTCAGCTACAAGGCGCTGTACAACTCGATCACGCGCCTCACGCACGATAAGACGGTGAACAAGCGGTTGATCGAAAAGAGCCAGCGGTTGGAGAGTATTGTTGAGACGATGAAGGAACGGGGCGAGTCGGAAGCGTACATTAACGAGATCCTGGAGACGCTCACACTGCCGGAGCAGGAAATAGTGGCCAAGGTGAACGGCGCGTGAAAAGTCTGTACAGCGCGGAGATCGGAATCGACGAAACCATCTTCATGCTGAAACTGTACCAGa               ]
[-] EMBL CNS08VKG             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCGTGCGCATGAAGAAGTATGTGGAGAAGGAGGACATCCAGAAGGAAGCGATGGTGCCGGCGAAGGACGCAAAGCTGCTGACGTACAAGCTGCTGGAGGAGAACTTTTTGCAGATTCAAACGTTCCGCAAACCGGGCGGTGGAAATTCCGGTGCACCGAAGTCGTTTTTCTTGTTCTACGTCAACCAGCCGCAGATTGTGTCGATGCTGCTGGAGCTCAGCTACAAGGCGCTGTACAACTCGATCACGCGCCTCACGCACGATAAGACGGTGAACAAGCGGTTGATCGAAAAGAGCCAGCGGTTGGAGAGTATTGTTGAGACGATGAAGGAACGGGGCGAGTCGGAAGCGTACATTAACGAGATCCTGGAGACGCTCACACCGCCGGAGCAGGAAATATTGGCCAAGGTGAA GGCGCGTGAAAAGTCTGTACAGCGCGGAGATCGGAATCGACGAAACCATCTTCATGCTGAAACTGTACCAGGAATATCA        ]


>consensus_8356#0 CCGGAAGCGTGGTTGTTGCAGTGAATTCGAATGAAAAATAGAAAATGTCCATTCAGCTAG GAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAGTGGTGCGAACGGTGGTAG ACGATCTGTTCGCATCGATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGA CCAAATCAGAGGTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTT CGCTAAACAAAGCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGG TATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTCGGCCACGAATCGGCCG TCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGT CAATGTCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCG CAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCGAAACCGTCCGACGGCG GTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGG ATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTGCCGGACGAGGACG TGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGA CCGCGATCGAGCGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGC TGATGCGCGAACGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATC TGCGGCACGCTGCGAACGTAAGTCGCAGAACGTGGAAATGCTGCGCTATCTCGACCAGTA CATCTCGGTGATGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCGGCCA GTTTACCGTGAACGTGAAGCGCATCTTCGAGCAGCTGACGTGGGCCTGCATCGAGAACAT TATCGTGGAAAAGTATGGCTCGAAGGCGGCCCGCATCTTTCGGGTCGTGCGCATGAAGAA GTATGTGGAGCAGGAGGACATCCAGAAGGAAGCGATGGTGCCGGCGAAGGACGCAAAGCT GCTGACGTACAAGCTGCTGGAGGAGAACTTTTTGCAGATTCAAACGTTCCGCAAACCGGG CGGTGGAAATTCCGGTGCACCGAAGTCGTTTTTCTTGTTCTACGTCAACCAGCCGCAGAT TGTGTCGATGCTGCTGGAGCTCAGCTACAAGGCGCTGTACAACTCGATCACGCGCCTCAC GCACGATAAGACGGTGAACAAGCGGTTGATCGAAAAGAGCCAGCGGTTGGAGAGTATTGT TGAGACGATGAAGGAACGGGGCGAGTCGGAAGCGTACATTAACGAGATCCTGGAGACGCT CACACCGCCGGAGCAGGAAATATTGGCCAAGGTGAACGGCGCGTGAAAAGTCTGTACAGC GCGGAGATCGGAATCGACGAAACCATCTTCATGCTGAAACTGTACCAGGAATATCAGAAA TAAA



consensusID : consensus_8356#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [CGACCCACGCGTCCGAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAGTGGTGCGAACGGTGGTAGACGATCTGTTCGCATCGATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTTGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCAAAACCGTCCGACGGTGGTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTGCCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGAC]

[+] EMBL BM579199             [CGACCCACGCGTCCGAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCGAGCAGCACTTTGGGGAAGTGGTGCGAACGGTGGTAGACGATCTGTTCGCATCGATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAGGTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGCACCTGATACAGACAAAGTTTGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACATAACCCGTGCACCGGAACCAAAACCGTCCGACGGTGGTGCCGACCTGATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTGCCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGCAGTTTCACATCGAC]


>consensus_8356#1 CGACCCACGCGTCCGAGAAAATGTCCATTCAGCTAGGAAAGCTATGTTCACGTATTATCG AGCAGCACTTTGGGGAAGTGGTGCGAACGGTGGTAGACGATCTGTTCGCATCGATCGCGA AACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAGGTATGCAAATCGT TAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAAGCCCGCACCGGGT ACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTATCCCCGCTACGTGC ACCTGATACAGACAAAGTTTGGCCACGAATCGGCCGTCCTGATGGAGGAACTGCTCCGCT CGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAACGTGGACGGCAAGG ATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCGCAAGAAAACTACA TAACCCGTGCACCGGAACCAAAACCGTCCGACGGTGGTGCCGACCTGATGGAGCTGTGCC ACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTACTGAAGGAACTGC ACGAAGGCAAACCGGTCAAGGTGCCGGACGAGGACGTGCACTGGGTGGTGAACGTGGAGC AGTTTCACATCGAC



consensusID : consensus_8356#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 213
fasta sequence
                              [CAGAATTCCCCCGAGTTTTAAAAGCACGGATGCCGGAAGCCGTGGTTGTTGCAGTGAATTCGAATGAAANAACTAGAAAGATGTCCATTGCAGCTAGGAAAGCTATGTTCACGTATTATCCGCACGCAGCACTTTGGGGCACAGNTGGTGCGAACGGTGGTACGACGATCCTGTTCGGCATTCGATCGCGAAACCCTTGTCGCAAATAATACG]

[+] EMBL AL933550             [CAGAATTCCCCCGAGTTTTAAAAGCACGGATGCCGGAAGCCGTGGTTGTTGCAGTGAATTCGAATGAAANAACTAGAAAGATGTCCATTGCAGCTAGGAAAGCTATGTTCACGTATTATCCGCACGCAGCACTTTGGGGCACAGNTGGTGCGAACGGTGGTACGACGATCCTGTTCGGCATTCGATCGCGAAACCCTTGTCGCAAATAATACG]


>consensus_8356#2 CAGAATTCCCCCGAGTTTTAAAAGCACGGATGCCGGAAGCCGTGGTTGTTGCAGTGAATT CGAATGAAANAACTAGAAAGATGTCCATTGCAGCTAGGAAAGCTATGTTCACGTATTATC CGCACGCAGCACTTTGGGGCACAGNTGGTGCGAACGGTGGTACGACGATCCTGTTCGGCA TTCGATCGCGAAACCCTTGTCGCAAATAATACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8356#0      --------------------------------------CCGGAAGCGTGGTTGTTGCAGT 22
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      CAGAATTCCCCCGAGTTTTAAAAGCACGGATGCCGGAAGCCGTGGTTGTTGCAGTGAATT 60
                                                                                  

consensus_8356#0      GAATTCGAATGAAAAATAGAAAATGTCCATT-CAGCTAGGAAAGCTATGTTCACGTATTA 81
consensus_8356#1      CGACCC--ACGCGTCCGAGAAAATGTCCATT-CAGCTAGGAAAGCTATGTTCACGTATTA 57
consensus_8356#2      CGAATG--AAANAACTAGAAAGATGTCCATTGCAGCTAGGAAAGCTATGTTCACGTATTA 118
                        *     *          ** ********* ****************************

consensus_8356#0      TCGA---GCAGCACTTTGGGG---AAGTGGTGCGAACGGTGGTA-GACGATC-TGTTCG- 132
consensus_8356#1      TCGA---GCAGCACTTTGGGG---AAGTGGTGCGAACGGTGGTA-GACGATC-TGTTCG- 108
consensus_8356#2      TCCGCACGCAGCACTTTGGGGCACAGNTGGTGCGAACGGTGGTACGACGATCCTGTTCGG 178
                      **     **************   *  ***************** ******* ****** 

consensus_8356#0      CAT-CGATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAG 191
consensus_8356#1      CAT-CGATCGCGAAACCCTTGTCGCAAATAATACGATCGACCGGATTGACCAAATCAGAG 167
consensus_8356#2      CATTCGATCGCGAAACCCTTGTCGCAAATAATACG------------------------- 213
                      *** *******************************                         

consensus_8356#0      GTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAA 251
consensus_8356#1      GTATGCAAATCGTTAGCCATCCTGATCAAGTTCAATATGGTAGGATTTTCGCTAAACAAA 227
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      GCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTAT 311
consensus_8356#1      GCCCGCACCGGGTACGAATATCGGCTGCATTACGATCGCATAGTGATGGTATTGCGCTAT 287
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CCCCGCTACGTGCACCTGATACAGACAAAGTTCGGCCACGAATCGGCCGTCCTGATGGAG 371
consensus_8356#1      CCCCGCTACGTGCACCTGATACAGACAAAGTTTGGCCACGAATCGGCCGTCCTGATGGAG 347
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      GAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAAC 431
consensus_8356#1      GAACTGCTCCGCTCGGGTACCCAGTGCGCCTCGTACATCATCGTCAAGTCAATGTCGAAC 407
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      GTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCG 491
consensus_8356#1      GTGGACGGCAAGGATAACAACACGCTAGCCTTGCTGAGGGACAAATTCGCAGACCTGGCG 467
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CAAGAAAACTACATAACCCGTGCACCGGAACCGAAACCGTCCGACGGCGGTGCCGACCTG 551
consensus_8356#1      CAAGAAAACTACATAACCCGTGCACCGGAACCAAAACCGTCCGACGGTGGTGCCGACCTG 527
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      ATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTA 611
consensus_8356#1      ATGGAGCTGTGCCACGACATTCCCAATCCCTTCCTAATGCCGGAGCTGGATTTGCGCGTA 587
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTGCCGGACGAGGACGTGCACTGGGTG 671
consensus_8356#1      CTGAAGGAACTGCACGAAGGCAAACCGGTCAAGGTGCCGGACGAGGACGTGCACTGGGTG 647
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      GTGAACGTGGAGCAGTTTCACATCGACTTCCGCAACACGATCATGGTGACCGCGATCGAG 731
consensus_8356#1      GTGAACGTGGAGCAGTTTCACATCGAC--------------------------------- 674
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CGGTTGATCGATAGCAATGCGGGCGAATGCATGAAGTACCTGCTGCAGCTGATGCGCGAA 791
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CGCACCAACCCGTGGGAAGCGGTGTCGAACCCGATTGCGCTGGTGGATCTGCGGCACGCT 851
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      GCGAACGTAAGTCGCAGAACGTGGAAATGCTGCGCTATCTCGACCAGTACATCTCGGTGA 911
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      TGGAGTCGAACGACTATCTGTCCAAGTTCGACACCAAGGGCGGCGGCCAGTTTACCGTGA 971
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      ACGTGAAGCGCATCTTCGAGCAGCTGACGTGGGCCTGCATCGAGAACATTATCGTGGAAA 1031
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      AGTATGGCTCGAAGGCGGCCCGCATCTTTCGGGTCGTGCGCATGAAGAAGTATGTGGAGC 1091
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      AGGAGGACATCCAGAAGGAAGCGATGGTGCCGGCGAAGGACGCAAAGCTGCTGACGTACA 1151
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      AGCTGCTGGAGGAGAACTTTTTGCAGATTCAAACGTTCCGCAAACCGGGCGGTGGAAATT 1211
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CCGGTGCACCGAAGTCGTTTTTCTTGTTCTACGTCAACCAGCCGCAGATTGTGTCGATGC 1271
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      TGCTGGAGCTCAGCTACAAGGCGCTGTACAACTCGATCACGCGCCTCACGCACGATAAGA 1331
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      CGGTGAACAAGCGGTTGATCGAAAAGAGCCAGCGGTTGGAGAGTATTGTTGAGACGATGA 1391
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      AGGAACGGGGCGAGTCGGAAGCGTACATTAACGAGATCCTGGAGACGCTCACACCGCCGG 1451
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      AGCAGGAAATATTGGCCAAGGTGAACGGCGCGTGAAAAGTCTGTACAGCGCGGAGATCGG 1511
consensus_8356#1      ------------------------------------------------------------
consensus_8356#2      ------------------------------------------------------------
                                                                                  

consensus_8356#0      AATCGACGAAACCATCTTCATGCTGAAACTGTACCAGGAATATCAGAAATAAA 1564
consensus_8356#1      -----------------------------------------------------
consensus_8356#2      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)