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Anopheles gambiae
cluster # 8369 cluster # 8369       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8369#0 length = 1205 sequences # 5  
consensus_8369#1 length = 926 sequences # 2  
consensus_8369#2 length = 651 sequences # 1  
consensus_8369#3 length = 550 sequences # 1  
consensus_8369#4 length = 144 sequences # 1  

consensusID : consensus_8369#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1205
fasta sequence
                              [CAGAATCGGCCGAGGCNNTAAATTGGCGGACATTAAGCANCAAAGTGCAGGATAAGTACAGATACTGCGAGAAACGTCGGAAAGTGTTGCTGGACCACGTGCACGAAGGCTACGAGAAGGATTGGTGGGAGTACACCAACTGATGATCATGATCGTGAATGCTGATGCAGATATGACGGAATGATGGTGGTGTGTGCGTGTGTGTGGTGTTGAATGTGAACGATTAGAGTGTTGGATCTGAAGCAACGCGT-CGTTCGACTTAA-TAACTAGTGGTTCAAC-TAATAATTTA-TAACCCTCGTAACGCTTCGGGGTCCCATC-GGTCGAACGTGGTCGAGGGAGGTCGATGTGGT-GTAGTGTC-GGCGCAGCGGGACGCCTTTACCTTA-GTAAGAACCGAAATGCGA-GACGAGAGCAATTCGACCAA-TTTCTACTGCCCCCTCAACCAACAAACACACACACACACACACACATACGCAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTGCTTGGTGTGTGTGTGTGTGAGAGAGAGAGAGAAAAGTCCCGATCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGGGAGATAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTCCCCCCACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGC-TTTGTGAAACATGAAACCCCTTCGNTTTGGTTTGTTGTCTTTTACTAAATGCNCGTAATTATTTTTAG-AAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAAACACACAGAGCTGCTTGGAAGGATTGTATCATACTTTTGCACACACACATACATTTGCAAAACTAAACAGTATGAAAACGGAAAAAGAAAAAAAGGAAACAGAAAAAAAGAAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTAGAAGAGCGGTAGAGGGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCATATGTTGTGTG]

[+] EMBL BX468613             [CAGAATCGGCCGAGGCNNTAAATTGGCGGACATTAAGCANCAAAGTGCAGGATAAGTACAGATACTGCGAGAAACGTCGGAAAGTGTTGCTGGACCACGTGCACGAAGGCTACGAGAAGGATTGGTGGGAGTACACCAACTGATGATCATGATCGTGAATGCTGATGCAGATATGACGGAATGATGGTGGTGTGTGCGTGTGTGTGGTGTTGAATGTGAACGATTAGAGTGTTGGATCTGAAGCAACGCGT CGTTCGACTTAAGTAACTAGTGGTTCAACGTAATAATTTAGTAACCCTCGTAACGCTTCGGGGTCCCATCGGGTCGAACGTGGTCCAGGGAGGTCGATGTGGTCGTAGTGTCAGGCGCAGCGGGACGCTTTTACCTTAGGTAAGAACCGAAATGCGAGGACGAGAGCAATTCGACCAAGTTTCTAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS098VE             [                                                                                                                                             GATGATCATGATCGTGAATGCTGATGCAGATATGACGGAATGATGGTGGTGTGTGCGTGTGTGTGGTGTTGAATGTGAACGATTAGAGTGTTGGATCTGAAGCAACGCGTGCGTTCGACTTAA TAACTAGTGGTTCAAC TAATAATTTA TAACCCTCGTAACGCTTCGGGGTCCCATC GGTCGAACGTGGTCGAGGGAGGTCGATGTGGT GTAGTGTC GGCGCA CGGGACGCCTTTACCTTA GTAAGAACCGAAATGCGA GACGAGAGCAATTCGACCAA TTTCTACTGCCCCCTCAACCAACAAACACACACACACACACACACATACGCAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTGCTTGGTGTGTGTGTGTGTTAGAGAGAGAGAGAAAAGTCCCGATCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGGGAGATAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTCCCCCCACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCG                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX625597             [                                                                                                                                                                                                                                               GAAGCAACGCGT CGTTCGACTTAA TAACTAGTGGTTCAAC TAATAATTTA TAACCCTCGTAACGCTTCGGGGTCCCATC GGTCGAACGTGGTCGAGGGAGGTCGATGTGGT GTAGTGTC GGCGCAGCGGGACGCCTTTACCTTA GTAAGAACCGAAATGCGA GACGAGAGCAATTCGACCAA TTTCTACTGCCCCCTCAACCAACAAACACACACACACACACACACATACGCAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTGCTTGGTGTGTGTGTGTGTGAGAGAGAGAGAGAAAAGTCCCGATCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGGGAGATAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTGAGTTGTCCCCCCACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGC TTTGTGAAACATGAAACCCCTTCGNTTTGGTTTGTTGTCTTTTACTAAATGCNCGTAATTATTTTTAG                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX610988             [                                                                                                                                                                                                                                                                   CTTAA TAACTAGTGGTTCAAC TAATAATTTA TAACCCTCGTAACGCTTCGGGGTCCCATC GGTCGAACGTGGTCGAGGGAGGTCGATGTGGT GTAGTGTC GGCGCAGCGGGACGCCTTTACCTTA GTAAGAACCGAAATGCGA GACGAGAGCAATTCGACCAA TTTCTACTGCCCCCTCAACCAACAAACACACACACACACACACACATACGCAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTTCTTGGTGTGTGTGTGTGTGAGAGAGAGAGAGAAAAGTCCCGATCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGGGAGATAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTCCCCCCACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGCGTTTGTGAAACATGAAACCCt                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM621139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGTTATCTACCGCTGATACGAACGGGAGAAAGGGAGATAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTCCCCCC    CCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGC TTTGTGAAACATGAAA CCCTTCGTTTTGGTTTGTTGTC TTTACTAAATGCACGTAATTA TTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAAACACACAGAGCTGCTTGGAAGGATTGTATCATACTTTTGCACACACACATACATTTGCAAAACTAAACAGTATGAAAACGGAAAAAGAAAAAAAGGAAACAGAAAAAAAGAAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTAGAAGAGCGGTAGAGGGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCATATGTTGTGTG]


>consensus_8369#0 CAGAATCGGCCGAGGCNNTAAATTGGCGGACATTAAGCANCAAAGTGCAGGATAAGTACA GATACTGCGAGAAACGTCGGAAAGTGTTGCTGGACCACGTGCACGAAGGCTACGAGAAGG ATTGGTGGGAGTACACCAACTGATGATCATGATCGTGAATGCTGATGCAGATATGACGGA ATGATGGTGGTGTGTGCGTGTGTGTGGTGTTGAATGTGAACGATTAGAGTGTTGGATCTG AAGCAACGCGTCGTTCGACTTAATAACTAGTGGTTCAACTAATAATTTATAACCCTCGTA ACGCTTCGGGGTCCCATCGGTCGAACGTGGTCGAGGGAGGTCGATGTGGTGTAGTGTCGG CGCAGCGGGACGCCTTTACCTTAGTAAGAACCGAAATGCGAGACGAGAGCAATTCGACCA ATTTCTACTGCCCCCTCAACCAACAAACACACACACACACACACACATACGCAAAGAAGA GTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTGCTTGGTGTGTGTGTGTGTG AGAGAGAGAGAGAAAAGTCCCGATCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAG CCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGGGAGATAGAGAGAT AGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTCCCCCC ACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTT TGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGCTTTGTGAAACATGAAACCCCTTC GNTTTGGTTTGTTGTCTTTTACTAAATGCNCGTAATTATTTTTAGAAGCAACCGTTACAA CATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAAACACACAGAGCTG CTTGGAAGGATTGTATCATACTTTTGCACACACACATACATTTGCAAAACTAAACAGTAT GAAAACGGAAAAAGAAAAAAAGGAAACAGAAAAAAAGAAAAAAAAAACGTTAACAAACCT TGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAG GGGCTAGAAGAGCGGTAGAGGGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCATATGTT GTGTG



consensusID : consensus_8369#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 926
fasta sequence
                              [ATCGCCCCGAGGTTACTCTCTCTATCTCTCTATCTCCCCACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAATCACACACAGAGCTGCTTGGAAGGATTGTATCATACTTTTGCACACACAAATACATTTGCAAAACTAAACAGCTATGAAAACAGAAACAGAAAAAAAGGAAACAGAAAAACAAGAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTG-TGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTACAAGAGCGGTCAGAGGGAAGAGAAATGAGAAGCANAGAGTATGCTTTCACTATG-TGTGTGTGATATAGGGTGCCGTGTGCGTGTCATGTACACTGGGGCGTNACATTTTNTANTTTCCTTTTTCCTTTTTCTCCTATTTTCGTGCAAGAACTGGCTGNTACCCTCAAACANATCCAACTTTGCATACCCTCGGAATNAGAGGAAGAATCGTGTTGTCCTTTGTTATGCACCACCCTCTGTTTTGTAGTATTTTACGGGCATCTGTACTTTGCTGTGTGCTATTGGGGCAAAAGACACAACGTGCTTCTTGTAGCTATTGTGGTGCGCGGGTGTGTGTTTTGATTGTTTGCTTTTGTTTTTCTCCCATCACCCATAATTGCTAATGTAGCGAATTTTTTTTTAACATTAAACAAACGCAACGGCGAAACACTACTCTTTCAGGTCCATGTGATCCTCCTACGT]

[+] EMBL AL933736             [ATCGCCCCGAGGTTACTCTCTCTATCTCTCTATCTCCCCACCTCCCATTTGAACTCTTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGTGTGTGCGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAATCACACACAGAGCTGCTTGGAAGGATTGTATCATACTTTTGCACACACAAATACATTTGCAAAACTAAACAGCTATGAAAACAGAAACAGAAAAAAAGGAAACAGAAAAACAAGAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTG TGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTACAAGAGCGGTCAGAGGGAAGAGAAATGAGAAGCANAGAGTATGCTTTCACTATG TGTGTGTGATATAGGGTGCCGTGTGCGTGTCATGTACACTGGGGCGTNACATTTTNTANTTTCCTTTTTCCTTTTTCTCCTATTTTCGTGCAAGAACTGGCTGNTACCCTCAAACANATCCAACTTTGCATACCCTCGGAATNAGAGGAAGA                                                                                                                                                                                                                                                                ]
[+] EMBL BM612761             [                                                                                                                                                                                                                                                                                                                              ccgGCAAAACTAAACAG TATGAAAACGGAAAAAGAAAAAAAGGAAACAGAAAAAAAAGAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTAGAAGAGCGGT AGAGGGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCA TATGTTGTGTGTGATATAGGGTGCCGTGTGCGTGTCATGTA GCTGGGGCGTTACATTTTATAATTTCCTTTTTCCTTTTTCTCCTATTTTCGTGCAAGAACTGGCTGCTACCCTCAACC  ATCCAACTTTGCATCCCCTCGGAATTAGAGGAAGAATCGTGTTGTCCTTTGTTATGCACCACCCTCTGTTTTGTAGTATTTTACGGGCATCTGTACTTTGCTGTGTGCTATTGGGGCAAAAGACACAACGTGCTTCTTGTAGCTATTGTGGTGCGCGGGTGTGTGTTTTGATTGTTTGCTTTTGTTTTTCTCCCATCACCCATAATTGCTAATGTAGCGAATTTTTTTTTAACATTAAACAAACGCAACGGCGAAACACTACTCTTTCAGGTCCATGTGATCCTCCTACGT]


>consensus_8369#1 ATCGCCCCGAGGTTACTCTCTCTATCTCTCTATCTCCCCACCTCCCATTTGAACTCTTGA TTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGTCTGT GTGTGCGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTTGGTTTGTTGTCTTTACTA AATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGC AAGCGAAAGAACGATATAAAAAATCACACACAGAGCTGCTTGGAAGGATTGTATCATACT TTTGCACACACAAATACATTTGCAAAACTAAACAGCTATGAAAACAGAAACAGAAAAAAA GGAAACAGAAAAACAAGAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAA CCACTGTGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTACAAGAGCGGTCAGAGG GAAGAGAAATGAGAAGCANAGAGTATGCTTTCACTATGTGTGTGTGATATAGGGTGCCGT GTGCGTGTCATGTACACTGGGGCGTNACATTTTNTANTTTCCTTTTTCCTTTTTCTCCTA TTTTCGTGCAAGAACTGGCTGNTACCCTCAAACANATCCAACTTTGCATACCCTCGGAAT NAGAGGAAGAATCGTGTTGTCCTTTGTTATGCACCACCCTCTGTTTTGTAGTATTTTACG GGCATCTGTACTTTGCTGTGTGCTATTGGGGCAAAAGACACAACGTGCTTCTTGTAGCTA TTGTGGTGCGCGGGTGTGTGTTTTGATTGTTTGCTTTTGTTTTTCTCCCATCACCCATAA TTGCTAATGTAGCGAATTTTTTTTTAACATTAAACAAACGCAACGGCGAAACACTACTCT TTCAGGTCCATGTGATCCTCCTACGT



consensusID : consensus_8369#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAACACACAGAGCTGCTTGGGAGGATTGTATCATACTTTTGCACACACACATACATTTGCAAAACTAAACAGTATGAAAACGGAAAAAGAAAAAAAAGGAAACAGAAAAAAAAGAAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTAGAAGAGCGGTAGAGAGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCATATGTTGTGTGTGATATAGGGTGCCGTGTGCGTGTCATGTAGCTGGGGCGTTACATTTTATAATTTCCTTTTTCCTTTTTCTCCTATTTTCGTGCAAAAGCTGGCTGCTACCCTCAACCATCCAACTTTGCATCCCCTCGGAATTAGAGGAAGAATCGTGTTGTCCTTTGTTATGCACCACCCTCTGTTTTGTAGTATTTTACGGGCATCTGGACTTTGCTGTGTGCTATTGGGGCAAA]

[+] EMBL BM608928             [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAACACACAGAGCTGCTTGGGAGGATTGTATCATACTTTTGCACACACACATACATTTGCAAAACTAAACAGTATGAAAACGGAAAAAGAAAAAAAAGGAAACAGAAAAAAAAGAAAAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAGGGGCTAGAAGAGCGGTAGAGAGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCATATGTTGTGTGTGATATAGGGTGCCGTGTGCGTGTCATGTAGCTGGGGCGTTACATTTTATAATTTCCTTTTTCCTTTTTCTCCTATTTTCGTGCAAAAGCTGGCTGCTACCCTCAACCATCCAACTTTGCATCCCCTCGGAATTAGAGGAAGAATCGTGTTGTCCTTTGTTATGCACCACCCTCTGTTTTGTAGTATTTTACGGGCATCTGGACTTTGCTGTGTGCTATTGGGGCAAA]


>consensus_8369#2 CCGCGGACGCGTGGGCGGACGCGTGGGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGT TTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACAT TATAAGCCCTAGGCTAGTCGCAAGCGAAAGAACGATATAAAAAACACACAGAGCTGCTTG GGAGGATTGTATCATACTTTTGCACACACACATACATTTGCAAAACTAAACAGTATGAAA ACGGAAAAAGAAAAAAAAGGAAACAGAAAAAAAAGAAAAAAAAAACGTTAACAAACCTTG ACCCACTAAACAAAACGAACCACTGTTGTGTTATCGGTGTAACCTTCGCCACACAAAGGG GCTAGAAGAGCGGTAGAGAGAAGAGAAATGAGAAGCAGAGAGTATGCTTTCATATGTTGT GTGTGATATAGGGTGCCGTGTGCGTGTCATGTAGCTGGGGCGTTACATTTTATAATTTCC TTTTTCCTTTTTCTCCTATTTTCGTGCAAAAGCTGGCTGCTACCCTCAACCATCCAACTT TGCATCCCCTCGGAATTAGAGGAAGAATCGTGTTGTCCTTTGTTATGCACCACCCTCTGT TTTGTAGTATTTTACGGGCATCTGGACTTTGCTGTGTGCTATTGGGGCAAA



consensusID : consensus_8369#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 550
fasta sequence
                              [CCGCGAGACGAGAGCAATTCGACCAATTTCAACTGCCCCCTCAACCAACAAACACACACACATACGCTAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTACTTGGTGTGTGAGTGTGTGTGAGAGAGAGAGATAGAGAAAAGTCCCGACCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTTCCCCCCCCCCTCCCCCATTTGAACGCTTGATTTTGATTCTCGGTTAGGTTTTCCTATATTTACCCATTTTGGATATATGCGTTTGTCTGTGTGTGACCGTGCGCGCTTTTTAAAACATGAAACCCTTCGTTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGGAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCCAAGCGAAAGAACGATATAAAAAACACA]

[+] EMBL BM655341             [CCGCGAGACGAGAGCAATTCGACCAATTTCAACTGCCCCCTCAACCAACAAACACACACACATACGCTAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTACTTGGTGTGTGAGTGTGTGTGAGAGAGAGAGATAGAGAAAAGTCCCGACCGCGCCACATTTAAATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTTTTTCAGTTGTTCCCCCCCCCCTCCCCCATTTGAACGCTTGATTTTGATTCTCGGTTAGGTTTTCCTATATTTACCCATTTTGGATATATGCGTTTGTCTGTGTGTGACCGTGCGCGCTTTTTAAAACATGAAACCCTTCGTTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTTAGGAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCCAAGCGAAAGAACGATATAAAAAACACA]


>consensus_8369#3 CCGCGAGACGAGAGCAATTCGACCAATTTCAACTGCCCCCTCAACCAACAAACACACACA CATACGCTAAAGAAGAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAATAGATGCTCTACTT GGTGTGTGAGTGTGTGTGAGAGAGAGAGATAGAGAAAAGTCCCGACCGCGCCACATTTAA ATTAATCGAAAAAAGATGGTAGCCAAAAGTAGGTTTTGTTATCTACCGCTGATACGAACG GGAGAAAGAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTAGCAGGCAGATATCCTT TTTCAGTTGTTCCCCCCCCCCTCCCCCATTTGAACGCTTGATTTTGATTCTCGGTTAGGT TTTCCTATATTTACCCATTTTGGATATATGCGTTTGTCTGTGTGTGACCGTGCGCGCTTT TTAAAACATGAAACCCTTCGTTTTGGTTTGTTGTCTTTACTAAATGCACGTAATTATTTT AGGAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCCAAGCGAAAGAACGATAT AAAAAACACA



consensusID : consensus_8369#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 144
fasta sequence
                              [GGAAAAATGTGTTTGTCTGTGTGTGCGCGCGCGCGCTTTGGGAAACAGGAAACCCCTCGTTTGGGGGGGGTGGCCTCACAAAAGGCACGAAAATATTTAAGAAAGCAACCGTGACAACAATAAAAGCCCCAGGCCAGTCGCAAG]

[+] EMBL BX610316             [GGAAAAATGTGTTTGTCTGTGTGTGCGCGCGCGCGCTTTGGGAAACAGGAAACCCCTCGTTTGGGGGGGGTGGCCTCACAAAAGGCACGAAAATATTTAAGAAAGCAACCGTGACAACAATAAAAGCCCCAGGCCAGTCGCAAG]


>consensus_8369#4 GGAAAAATGTGTTTGTCTGTGTGTGCGCGCGCGCGCTTTGGGAAACAGGAAACCCCTCGT TTGGGGGGGGTGGCCTCACAAAAGGCACGAAAATATTTAAGAAAGCAACCGTGACAACAA TAAAAGCCCCAGGCCAGTCGCAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8369#1      ------------------------------------------------------------
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      CAGAATCGGCCGAGGCNNTAAATTGGCGGACATTAAGCANCAAAGTGCAGGATAAGTACA 60
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      ------------------------------------------------------------
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      GATACTGCGAGAAACGTCGGAAAGTGTTGCTGGACCACGTGCACGAAGGCTACGAGAAGG 120
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      ------------------------------------------------------------
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      ATTGGTGGGAGTACACCAACTGATGATCATGATCGTGAATGCTGATGCAGATATGACGGA 180
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      ----ATCGCCCCGAGGTTACTCTCTCTATCTCTCTATCTCCCCACCTCCCATTTGAACTC 56
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      ATGATGGTGGTGTGTGCGTGTGTGTGGTGTTGAATGTGAACGATTAGAGTGTTGGATCTG 240
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      TTGATTTTGATTCTCGGTTAGGATTTCCTATACTTACCTATTTTGGATATATGTGTTTGT 116
consensus_8369#2      --------------------------------------------CCGCGGACGCGTGGGC 16
consensus_8369#4      --------------------------------------------GGAAAAATGTGTTTGT 16
consensus_8369#0      AAGCAACGCGTCGTTCGACTTAATAACTAGTGGTTCAACTAATAATTTATAACCCTCGTA 300
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      CTGTGTGTGCGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTT-GGTTTGTTGTCTT 175
consensus_8369#2      GGACGCGTGGGCGCGCGCGCTTTGTGAAACATGAAACCCTTCGTTTTGGTTTGTTGTCTT 76
consensus_8369#4      CTGTGTGTGCGCGCGCGCGCTTTGGGAAACAGGAAACCCCTCGTTTGGGGGGGGTGGCCT 76
consensus_8369#0      ACGCTTCGGGGTCCCATCGGTCGAACGTGGTCGAGGGAGGTCGATGTGGTGTAGTGTCGG 360
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      TACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTA 235
consensus_8369#2      TACTAAATGCACGTAATTATTTTAGAAAGCAACCGTTACAACATTATAAGCCCTAGGCTA 136
consensus_8369#4      CACAAAAGGCACGAAAATATTTAAGAAAGCAACCGTGACAACAATAAAAGCCCCAGGCCA 136
consensus_8369#0      CGCAGCGGGACGCCTTTACCTTAGTAAGAACCGAAATGCGAGACGAGAGCAATTCGACCA 420
consensus_8369#3      -----------------------------------CCGCGAGACGAGAGCAATTCGACCA 25
                                                            * * *  * *       * * *

consensus_8369#1      GTCGCAAGCGAAAGAACGATATAAAAAATCACACACAGAGCTGCTTGGAAGGATTGTATC 295
consensus_8369#2      GTCGCAAGCGAAAGAACGATATAAAAAA---CACACAGAGCTGCTTGGGAGGATTGTATC 193
consensus_8369#4      GTCGCAAG---------------------------------------------------- 144
consensus_8369#0      ATTTCTACTGCCCCCTCAAC-CAACAAA-CACACACACACACACACACATACGCAAAGAA 478
consensus_8369#3      ATTTCAACTGCCCCCTCAAC-CAACAAA-CACACACACATACGC---------TAAAGAA 74
                       *  * *                                                     

consensus_8369#1      ATACTTTTGCACACACAAATACATTTGCAAAACTAAACAGCTATGAAAACAGAAACAGAA 355
consensus_8369#2      ATACTTTTGCACACACACATACATTTGCAAAACTAAACAG-TATGAAAACGGAAAAAGAA 252
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      GAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAA-TAGAT-GCTCTGCTTGGTGTGTG--TG 534
consensus_8369#3      GAGTCTTCGCCGTCGCTCGTGTTGTAGCAAAA-TAGAT-GCTCTACTTGGTGTGTGAGTG 132
                                                                                  

consensus_8369#1      AAAAA-GGAAACAGAAAAACAAGAAAAAAAAA-CGTTAACAAACCTTGACCCACTAAACA 413
consensus_8369#2      AAAAAAGGAAACAGAAAAAAAAGAAAAAAAAAACGTTAACAAACCTTGACCCACTAAACA 312
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      TGTGTGAGAGAGAGAGA----GAAAAGTCCCGATCGCGCCACATTTAAATTAATCGAAAA 590
consensus_8369#3      TGTGTGAGAGAGAGAGATAGAGAAAAGTCCCGACCGCGCCACATTTAAATTAATCGAAAA 192
                                                                                  

consensus_8369#1      AAACGAACCACTGT-GTGTTATCGGTGTAACCT-TCGCC-ACACAAAGGGGCTACAAGAG 470
consensus_8369#2      AAACGAACCACTGTTGTGTTATCGGTGTAACCT-TCGCC-ACACAAAGGGGCTAGAAGAG 370
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      AAGATGGTAGCCAA-AAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAGGGA 649
consensus_8369#3      AAGATGGTAGCCAA-AAGTAGGTTTTGTTATCTACCGCTGATACGAACGGGAGAAAG--- 248
                                                                                  

consensus_8369#1      CGGTCAGAGGGA-AGAGAAATGAGAA---GCANAGAGTATGCTTTCACTATGTGTGTGTG 526
consensus_8369#2      CGGT-AGAGAGA-AGAGAAATGAGAA---GCAGAGAGTATGCTTTCATATGTTGTGTGTG 425
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      GATAGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTA-GCAGGCAGATATCCTTTTTC 708
consensus_8369#3      ---AGAGAGATAGAGAGAGCTTAGCACACACAGTTAGTA-GCAGGCAGATATCCTTTTTC 304
                                                                                  

consensus_8369#1      ATATAGGGTGCCGTGTGCGTGTCATGTACACTGGGGCGTNACATTTTNTANTTTCCTTTT 586
consensus_8369#2      ATATAGGGTGCCGTGTGCGTGTCATGTA-GCTGGGGCGTTACATTTTATAATTTCCTTTT 484
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      AGTTGTCCCCCCACCTC----CCATTTGAACTCTTGATTTTGATTCT-CGGTTAGGATTT 763
consensus_8369#3      AGTTGTTCCCCCCCCCCTCCCCCATTTGAACGCTTGATTTTGATTCT-CGGTTAGGTTTT 363
                                                                                  

consensus_8369#1      TCCTTTTTCTCCTATTTTCG-TGCAAGAACTGGCTGNTACCCTCAAACANATCCAACTTT 645
consensus_8369#2      TCCTTTTTCTCCTATTTTCG-TGCAAAAGCTGGCTGCTACCCTCAACCA--TCCAACTTT 541
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      CCTATACTTACCTATTTTGGATATATGTGTTTGT--CTGTGTGTGCGCGCGCGCG-CTTT 820
consensus_8369#3      CCTATATTTACCCATTTTGGATATATGCGTTTGT--CTGTGTGTGACCGTGCGCG-CTTT 420
                                                                                  

consensus_8369#1      GCATACCCTCGGAATNAGAGGAAGAATCGTGTTGTCCTTTGTTA--TGCACCACCCTCTG 703
consensus_8369#2      GCATCCCCTCGGAATTAGAGGAAGAATCGTGTTGTCCTTTGTTA--TGCACCACCCTCTG 599
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      GTGAAACATGAAACCCCTTCGNTTTGGTTTGTTGTCTTTTACTAAATGCNCGTAATTATT 880
consensus_8369#3      TTAAAACATGAAACCC-TTCGTTTTGGTTTGTTGTCTTT-ACTAAATGCACGTAATTATT 478
                                                                                  

consensus_8369#1      TTTTGTAGTATT--TTACGGGCATCTGTACTTT--GCTGTGTGCTATTGGGGCAAAAGAC 759
consensus_8369#2      TTTTGTAGTATT--TTACGGGCATCTGGACTTT--GCTGTGTGCTATTGGGGCAAA---- 651
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      TTTAGAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGC-AAGCGAAAGAACGAT 939
consensus_8369#3      TTAGGAAGCAACCGTTACAACATTATAAGCCCTAGGCTAGTCGCCAAGCGAAAGAACGAT 538
                                                                                  

consensus_8369#1      ACAACGTGCTTCTTGTAGCTATTGTGGTGCGCGGGTGTGTGTTTTGATTGTTTGCTTTTG 819
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      ATAAAAAAACACACAGAGCTGCTTGGAAGGATTGTATCATACTTTTGCACACACACATAC 999
consensus_8369#3      ATAAAAAA-CACA----------------------------------------------- 550
                                                                                  

consensus_8369#1      TTTTTCTCCCATCACCCATAATTGCTAATGTAGCGAATTTTTTTTTAACATTAAACAAAC 879
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      ATTTGCAAAACTAAACAGTATGAAAACGGAAAAAGAAAAAAAGGAAACAGAAAAAAAGAA 1059
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      GCAACGGCGAAACACTACTCTTTCAGGTCCATGTGATCCTCCTACGT------------- 926
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      AAAAAAAACGTTAACAAACCTTGACCCACTAAACAAAACGAACCACTGTTGTGTTATCGG 1119
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      ------------------------------------------------------------
consensus_8369#2      ------------------------------------------------------------
consensus_8369#4      ------------------------------------------------------------
consensus_8369#0      TGTAACCTTCGCCACACAAAGGGGCTAGAAGAGCGGTAGAGGGAAGAGAAATGAGAAGCA 1179
consensus_8369#3      ------------------------------------------------------------
                                                                                  

consensus_8369#1      --------------------------
consensus_8369#2      --------------------------
consensus_8369#4      --------------------------
consensus_8369#0      GAGAGTATGCTTTCATATGTTGTGTG 1205
consensus_8369#3      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)