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Anopheles gambiae
cluster # 8396 cluster # 8396       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8396#0 length = 1462 sequences # 8  
consensus_8396#1 length = 704 sequences # 1  
consensus_8396#2 length = 599 sequences # 1  

consensusID : consensus_8396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1462
fasta sequence
                              [GACAGCGAGTCGCGCTACGGTTA-CCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTT-GGGATGCAATTGTGAGTTCGTGAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGACTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGACACTGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACTGCTGGCTGTACGATGGCGAGGCACTGCGCGCATCAATGAACTACACGGCGGCTGTGTTTGTCATCATTGGAACATGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGACTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAAGGAAGAGGAGGCACAAACTACTCGTAACAACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTACGGACAGCCCGGGTGGATTGTGTCGTGTGCCATACCGTGCTGCAGCATCTGTGTACCTGCGCGTTATCACTCGTTTGATGGAAAACACCGCTTATCGGTCTGAAATGCAAACAGACGACACCTAATAGGTGTGTGGTGGGGCGTGTGTGTATGTGTGTGTTTGTGAGTACACAATAAACTGACCCATGACTCTTGTTGTGGTA]

[+] EMBL CNS08QOP             [GACAGCGAGTCGCGCTGCGCTTA CCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTTGGGGATGC ATTGTGAGTTCGTGAAGTACGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08U5O             [       AGTCGCGCTACGGTTA CCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTT GGGATGCAATTGTGAGTTCGTGAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGACTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGACACTGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACTGCTGGCTGTACGATGGCGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08FYU             [          CGCGCTA GGTTATCCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTT GGGATGCAATTGTGAGTTCGTGAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGACTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGACACTGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTTCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08Q1F             [                   gtat CCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTT GGGATGCAATTGTGAGTTCGTGAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGACTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGACACTGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08FYV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGAACTCGCTCAAGGATCCAACAGGAACAACGGTAGGTG GAATGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACTGCTGGCTGTACGATGGCGAGGCACTGCGCGCATCAATGAACTACACGGCGGCTGTGTTTGTCATCATTGGAACATGCTTCGATATGGGCACTTGGTACCACTCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGACTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAAGGAAGAGGAGGCACAAACTACTCGTAACAACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTACGGACAGCCCGGGTGGATTGTGTCGTGTGCCATACCGTGCTGCAGCATCTGTGTACCTGCGCGTTATAACTCGTTTGATGGAAAACACCGCTTATCGGTCTGAAATGCAAACAGACGACACCTAATAGGTGTGTGGTGGGGCGTGTGTGTATGTGTGTGTTTGTGAGTACACAATAAACTGACCC                  ]
[-] EMBL CNS08U5P             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGAACTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGA ACTGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACTGCTGGCTGTACGATGGCGAGGCACTGCGCGCATCAATGAACTACACGGCGGCTGTGTTTGTCATCATTGGCACATGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGGGCAGACTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAAGGAAGAGGAGGCACAAACTACTCGTAACAACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTACGGACAGCCCGGGTGGATTGTGTCGTGTGCCATACCGTGCTGCAGCATCTGTGTACCTGCGCGTTATCACTCGTTTGATGGAAAACACCGCTTATCGGTCTGAAATGCAAACAGACGACACCTAATAGGTGTGTGGTGGGGCGTGTGTGTATGTGTGTGTTTGTGAGTACACAATAAACTGACCCAT                ]
[-] EMBL CNS08Q1G             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACGGTAGGTGA ACTGCGTTCGTATGAAAGCTACAACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACTGCTGGCTGTACGATGGCGAGGCACTGCGCGCATCAATGAACTACACGGCGGCTGTGTTTGTCATCATTGGCACATGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGACTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAAGGAAGAGGAGGCACAAACTACTCGTAACAACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTACGGACAGCCCGGGTGGATTGTGTCGTGTGC                                                                                                                                                                             ]
[-] EMBL CNS08QOQ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTCATCATTGGAACATGCTTCGATATGGGCACCTGGTACTAATCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGACTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAAGGAAGAGGAGGCACAAACTACTCGTAACAACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTACGGACAGCCCGGGTGGATTGTGTCGTGTGCCATACCGTGCTGCAGCATCTGTGTACCTGCGCGTTATCACTCGTTTGATGGAAAACACCGCTTATCGGTCTGAAATGCAAACAGACGACACCTAATAGGTGTGTGGTGGGGCGTGTGTGTATGTGTGTGTTTGTGAGTACACAATAAACTGACCCATGACTCTTGTTGTGGTA]


>consensus_8396#0 GACAGCGAGTCGCGCTACGGTTACCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAA GGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGT GTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCA GGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGG CTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAA GCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGC GGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGT TGCTAATTCTCAAGACGCATCCTGTAGTTTGGGATGCAATTGTGAGTTCGTGAAGTACGC CCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGA CTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGACACTGCGTTCGTATGAAAGCTACA ACTGCTGATCGGTTTGTTAACACCTGCCAGCTTTACACAAACTGTTCCTGCATCGCGAGC CCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTACGGTTCGGCCACGCCTGGAAGT TGCCCAGTGGATTGCGGGACACCGTTCTACTTCTTCCTGGTGTGCTTATGCTTGAACAAG TTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTCGAGCCA CGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTT CCCGCACCGATCGTCTTCGGTGCGATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACC TGCGCTAAACGGGGCAACTGCTGGCTGTACGATGGCGAGGCACTGCGCGCATCAATGAAC TACACGGCGGCTGTGTTTGTCATCATTGGAACATGCTTCGATATGGGCACCTGGTACTAC TCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGACTGCTAGCAAGAGCCCC ACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAAGGAAGAGGAGGCACAAACTACT CGTAACAACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTAC GGACAGCCCGGGTGGATTGTGTCGTGTGCCATACCGTGCTGCAGCATCTGTGTACCTGCG CGTTATCACTCGTTTGATGGAAAACACCGCTTATCGGTCTGAAATGCAAACAGACGACAC CTAATAGGTGTGTGGTGGGGCGTGTGTGTATGTGTGTGTTTGTGAGTACACAATAAACTG ACCCATGACTCTTGTTGTGGTA



consensusID : consensus_8396#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 704
fasta sequence
                              [CCGCCCACGCGTCCGCCCGAAGGTGCTGCCCAGGACGGCGGAACGCATATCGCTTTCCCGGCAGGCGAGTCGCGCTAGCGGTACCTCGACCGCCGAAGAGGATGTCGAGACGAACCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGGCTCGTCACCAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATTACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCTAGACAGCTGGCCGGGTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTTGGGATGCAATTGTGAGTTCGTGAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGACTCGCTCAAGGATCCAACTGGAACAACGCTCTACACAAACTGTTCCTGCATCGCGAGCCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTATGGTTCG]

[+] EMBL BM623868             [CCGCCCACGCGTCCGCCCGAAGGTGCTGCCCAGGACGGCGGAACGCATATCGCTTTCCCGGCAGGCGAGTCGCGCTAGCGGTACCTCGACCGCCGAAGAGGATGTCGAGACGAACCGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGGCTCGTCACCAACAAGGCGTACGTGTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATTACGGGCTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAAGCTGCGTGTCAGTTCTAGACAGCTGGCCGGGTGGAACGTAATCACAAGCATTCTTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGTTGCTAATTCTCAAGACGCATCCTGTAGTTTGGGATGCAATTGTGAGTTCGTGAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGACTCGCTCAAGGATCCAACTGGAACAACGCTCTACACAAACTGTTCCTGCATCGCGAGCCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTATGGTTCG]


>consensus_8396#1 CCGCCCACGCGTCCGCCCGAAGGTGCTGCCCAGGACGGCGGAACGCATATCGCTTTCCCG GCAGGCGAGTCGCGCTAGCGGTACCTCGACCGCCGAAGAGGATGTCGAGACGAACCGGAA GGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGGCTCGTCACCAACAAGGCGTACGT GTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCA GGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATTACGGG CTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAA GCTGCGTGTCAGTTCTAGACAGCTGGCCGGGTGGAACGTAATCACAAGCATTCTTTCGGC GGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGT TGCTAATTCTCAAGACGCATCCTGTAGTTTGGGATGCAATTGTGAGTTCGTGAAGTACGC CCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGA CTCGCTCAAGGATCCAACTGGAACAACGCTCTACACAAACTGTTCCTGCATCGCGAGCCC CGACAGATGATTTGGATGCCAATTTCACCTCCTCTTATGGTTCG



consensusID : consensus_8396#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [GCAGAATCGCCACGAGGTNGATCTACACAAACTGTTCCTGCCTCGCGAGCTCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTATGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGACTGCGGGACACCGTTCTACTTCTTCCTGATGTGCTTGTGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTTGAACCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCTGCACCGATCGTCTTCGGTGCTATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACAGGGCAACTGCTGGCTGTACGATGGTGAGGCACTGCGCGCATCAATGAACTACACGGCGGCTGTAGTTTGTCATCATTGGAACCTGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGAGTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAACGGAACGAGGAGGCACAAACTACTCGTAA]

[+] EMBL BX467249             [GCAGAATCGCCACGAGGTNGATCTACACAAACTGTTCCTGCCTCGCGAGCTCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTATGGTTCGGCCACGCCTGGAAGTTGCCCAGTGGACTGCGGGACACCGTTCTACTTCTTCCTGATGTGCTTGTGCTTGAACAAGTTTATCGGTGGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTTGAACCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCTGCACCGATCGTCTTCGGTGCTATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAACAGGGCAACTGCTGGCTGTACGATGGTGAGGCACTGCGCGCATCAATGAACTACACGGCGGCTGTAGTTTGTCATCATTGGAACCTGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTCGACGATAAGCCCGGCGAGCAGAGTGCTAGCAAGAGCCCCACGGAACGGGAGCTAGTGTCGCTCGTTAGTAAAGCGAACGGAACGAGGAGGCACAAACTACTCGTAA]


>consensus_8396#2 GCAGAATCGCCACGAGGTNGATCTACACAAACTGTTCCTGCCTCGCGAGCTCCGACAGAT GATTTGGATGCCAATTTCACCTCCTCTTATGGTTCGGCCACGCCTGGAAGTTGCCCAGTG GACTGCGGGACACCGTTCTACTTCTTCCTGATGTGCTTGTGCTTGAACAAGTTTATCGGT GGCACGGAATCGGCTGCAAACTTTCTCATCGGCTTAAGATGTGTTGAACCACGCGATAAA GCCATCTCGATGGGATTCTCGATGGCGATCAACACACTGTTCTCGTTCCTTCCTGCACCG ATCGTCTTCGGTGCTATCATCGACCGGACCTGTGTGCTTTGGGGCCGTACCTGCGCTAAA CAGGGCAACTGCTGGCTGTACGATGGTGAGGCACTGCGCGCATCAATGAACTACACGGCG GCTGTAGTTTGTCATCATTGGAACCTGCTTCGATATGGGCACCTGGTACTACTCGAAGAA CTTTAAGATATTCGACGATAAGCCCGGCGAGCAGAGTGCTAGCAAGAGCCCCACGGAACG GGAGCTAGTGTCGCTCGTTAGTAAAGCGAACGGAACGAGGAGGCACAAACTACTCGTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8396#0      GACAGCGAGTCGCGCTACGGTTACCTCGACCGCCGAAGAGGATGTCGAGACGAATCGGAA 60
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      GGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGTCTCGTTACTAACAAGGCGTACGT 120
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      GTTTAACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCTGTTTCA 180
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      GGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGATCACGGG 240
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      CTCTACTTCGCTCGTCTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGATCCAAAA 300
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      GCTGCGTGTCAGTTCCAGACAGTTGGCCGGCTGGAACGTAATCACAAGCATTCTTTCGGC 360
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      GGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCGTTGAACAATGCAGATATCGT 420
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      TGCTAATTCTCAAGACGCATCCTGTAGTTTGGGATGCAATTGTGAGTTCGTGAAGTACGC 480
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      CCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGGATGCCGGGA 540
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      CTCGCTCAAGGATCCAACAGGAACAACGGTAGGTGACACTGCGTTCGTATGAAAGCTACA 600
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      ACTGCTGATCGGTTTGTTAACACCTGCCAG-CTTTACACAAACTGTTCCTGCATCGCGAG 659
consensus_8396#2      ----------GCAGAATCGCCACGAGGTNG-ATCTACACAAACTGTTCCTGCCTCGCGAG 49
consensus_8396#1      ----CCGCCCACGCGTCCGCCCGAAGGTGCTGCCCAGGACGGCGGAACGCATATCGCTTT 56
                                          *    *         *      * *  *     ****   

consensus_8396#0      C-CCGACAGATGATTTG-GATGCCAATTTCACCTCCTCTTACG-----GTTCGGCCACGC 712
consensus_8396#2      CTCCGACAGATGATTTG-GATGCCAATTTCACCTCCTCTTATG-----GTTCGGCCACGC 103
consensus_8396#1      C-CCGGCAGGCGAGTCGCGCTAGCGGTACCTCGACCGCCGAAGAGGATGTCGAGACGAAC 115
                      * *** ***  ** * * * *  *  *  * *  ** *  * *     **   * *   *

consensus_8396#0      CTGGAAGT--TGCCCAGTGGATTGCGGGACACCGT---TCTACTTCTTCCTGGT---GTG 764
consensus_8396#2      CTGGAAGT--TGCCCAGTGGACTGCGGGACACCGT---TCTACTTCTTCCTGAT---GTG 155
consensus_8396#1      CGGAAGGTGTCGTTCAGTGACATGCTGGTTACGGTGCGCCGGCTCGTCACCAACAAGGCG 175
                      * * * **   *  *****   *** **  ** **    *  **  *  *       * *

consensus_8396#0      CTTATGCTTGAACAAGTTTATCGGTGGC----ACGGAATCGGCTGCAAACTTTCTCATCG 820
consensus_8396#2      CTTGTGCTTGAACAAGTTTATCGGTGGC----ACGGAATCGGCTGCAAACTTTCTCATCG 211
consensus_8396#1      TACGTGTTT-AACAATGTGGCCAGCATCTTCTACTTCTTCGGGTATATGCCGTACTTCCT 234
                          ** ** *****  *   * *   *    **    **** *  *  *  *     * 

consensus_8396#0      GCTTAAGA-----TGTGTCGAGCCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGC 875
consensus_8396#2      GCTTAAGA-----TGTGTTGAACCACGCGATAAAGCCATCTCGATGGGATTCTCGATGGC 266
consensus_8396#1      GTTTCAGGCTAAGTACATCGAGATCCAGTATCGGCTGACACCGTCCCAGGCTAACATGAT 294
                      * ** **      *   * **    *   **      *   **            ***  

consensus_8396#0      GATCAACAC-ACTGTTCTCGTTCCTTCCCGCACCGA------TCGTCTTCGGTGCGATCA 928
consensus_8396#2      GATCAACAC-ACTGTTCTCGTTCCTTCCTGCACCGA------TCGTCTTCGGTGCTATCA 319
consensus_8396#1      TACGGGCTCTACTTCGCTCGT-CTTTTCCGCACTGGGAATACTGATCGCCGGTATGGTGA 353
                       *    * * ***   ***** * ** * **** *       *  **  ****    * *

consensus_8396#0      TCGACCGGACCTGTGT--GCTTTGGGGCCGTACCTGCGCTAAACGGGGCAACTGCTGGCT 986
consensus_8396#2      TCGACCGGACCTGTGT--GCTTTGGGGCCGTACCTGCGCTAAACAGGGCAACTGCTGGCT 377
consensus_8396#1      TCCAAAAGCTGCGTGTCAGTTCTAGACAGCTGGCCGGGTGGAACGTAATCACAAGCATTC 413
                      ** *   *    ****  * * * *     *  * * *   ***      **        

consensus_8396#0      GTACGATGGCGA--GGCACTGCGC--GCATCAATGAACTACACGGCGGCTGT-GTTTGTC 1041
consensus_8396#2      GTACGATGGTGA--GGCACTGCGC--GCATCAATGAACTACACGGCGGCTGTAGTTTGTC 433
consensus_8396#1      TTTCGGCGGCACTCATCGTTGGGTATGCGTGGTTCGGTTGCTCTGCG-TTGAACAATGCA 472
                       * **  **       *  ** *   ** *   *    * * * ***  **     **  

consensus_8396#0      ATCATTGGAACATGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTC 1101
consensus_8396#2      ATCATTGGAACCTGCTTCGATATGGGCACCTGGTACTACTCGAAGAACTTTAAGATATTC 493
consensus_8396#1      GATATCGTTGC-TAATTCTCAAGACGCATCCTGTAGTTTGGGATGCAATTGTGAGTTCGT 531
                         ** *   * *  ***   *   *** *  *** *    ** * * **     *    

consensus_8396#0      GACGATAAGCCCGGCGAGCAGA-CTGCTAG-CAAGAG-------CCCCACGGAACGGGAG 1152
consensus_8396#2      GACGATAAGCCCGGCGAGCAGA-GTGCTAG-CAAGAG-------CCCCACGGAACGGGAG 544
consensus_8396#1      GAAGTACGCCCCAATCTGTGGAAGCGATGGACAAACGTATCTTTCGCCGTGTCATGCTGG 591
                      ** *     ***     *  **   * * * ***  *       * **  *  * *   *

consensus_8396#0      CTAGTGTCGCTCGTTAGTAAAGCGAAG-GAA--GAGGAG--GCACAAACTACTCGTAACA 1207
consensus_8396#2      CTAGTGTCGCTCGTTAGTAAAGCGAAC-GGAACGAGGAG--GCACAAACTACTCGTAA-- 599
consensus_8396#1      ATGCCGGGACTCGCTCAAGGATCCAACTGGAACAACGCTCTACACAAACTGTTCCTGCAT 651
                       *   *   **** *     * * **  * *   * *     ********  ** *    

consensus_8396#0      ACCAGTAACCGGTTTGATCACGACGACCTTGACGACTTCTTGTGTGGAGCTACGGACAGC 1267
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      CGCGAGCCCCGACAGATGATTTGGATGCCAATTTCACCTCCTCTTATGGTTCG------- 704
                                                                                  

consensus_8396#0      CCGGGTGGATTGTGTCGTGTGCCATACCGTGCTGCAGCATCTGTGTACCTGCGCGTTATC 1327
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      ACTCGTTTGATGGAAAACACCGCTTATCGGTCTGAAATGCAAACAGACGACACCTAATAG 1387
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      GTGTGTGGTGGGGCGTGTGTGTATGTGTGTGTTTGTGAGTACACAATAAACTGACCCATG 1447
consensus_8396#2      ------------------------------------------------------------
consensus_8396#1      ------------------------------------------------------------
                                                                                  

consensus_8396#0      ACTCTTGTTGTGGTA 1462
consensus_8396#2      ---------------
consensus_8396#1      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)