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Anopheles gambiae
cluster # 8405 cluster # 8405       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8405#0 length = 1426 sequences # 4  
consensus_8405#1 length = 1411 sequences # 5  
consensus_8405#2 length = 891 sequences # 1  

consensusID : consensus_8405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1426
fasta sequence
                              [GCACATGCTGCCTTTTGTTTNAATTTTTTTAATCTCACGTACTGCTGTTAACTTTATTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGC-AGTTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGCCGTCAGATCGACGATCTTTTTCTTCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACGAGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCA-TTTTCGGNCCACAGGGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCTTGAAGTCGTTCGTCAGCACCGACTGGTACTTGAAGCGGTCCAGGTAGGCACGGAAGAACGGCTCAAACTTGGACGGTCCGCCTAGCAGATCTTCCAGGTAGCGCAAGAACGTCGAGCCCTTAATATACGGCACGGTGGAGAAGGCATCGTCCGGTCCACACTCCGACAGATCTACGACGAGCTTCGTCAGCTCGGGCGTGTCGGCCAGTTGAGTTTTAATACAATCCGACAGCTCGCTTAAACCGTGCAGGGCGTGAAAATCGCGCGACGCATTGCCGGACAACCGTCCGACGATCTTTCCCTCGACGAACACGGTAAAGCCTTCGTTCAGCCAGAAATGCTCAAAGTTTCTATTCGTCACCAAGTTGCCCGTCCAGCTGTGCGCAATTTCGTGCGCAACCACCGTGGCAAGCGATTTATCACCCGCCAGCAGTGTTGGCGTCACGGACGTCAGGCAAGGATTCTCCATACCTCCGAACGGGAAGCTTGGCGGCATTACCAGCAAATCGTACCGCTCCCAAACGTACGGACCACAGATTTCCTCCGCCTTCGCGATGAAATCGGCCGTTTGGGAAAATTCCTCTGCCGCCTCATCAATCTGCTCCTGCTCGGCCCACACGCTGGAGATAGGTCCAATTGGTTTCGACACCAGCGCACCTACCACAATTGCCAGCAGATAGCTTGGGATAGGAATTTTCTGCTGAAACTTCGATACTCCCGGTTCCGAGCGG]

[+] EMBL BX466656             [GCACATGCTGCCTTTTGTTTNAATTTTTTTAATCTCACGTACTGCTGTTAACTTTATTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGC AGTTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGCCGTCAGATCGACGATCTTTTTCTTCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACGAGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCA TTTTCGGNCCACAGGGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCATTCCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09L8X             [                                             TGTTAACTTTATTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAAGTTCCGCGTTCTTCGTCGTGCTGAAGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BM588083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCATTTTTCGGCCCAGA GGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCTTGAAGTCGTTCGTCAGCACCGACTGGTACTTGAAGCGGTCCAGGTAGGCACGGAAGAACGGCTCAAACTTGGACGGTCCGCCTAGCAGATCTTCCAGGTAGCGCAAGAACGTCGAGCCCTTAATATACGGCACGGTGGAGAAGGCATCGTCCGGTCCACACTCCGACAGATCTACGACGAGCTTCGTCAGCTCGGGCGTGTCGGCCAGTTGAGTTTTAATACAATCCGACAGCTCGCTTAAACCGTGCAGGGCGTGAAAATCGCGCGACGCATTGCCGGACAACCGTCCGACGATCTTTCCCTCGACGAACACGGTAAAGCCTTCGTTCAGCCAGAAATGCTCAAAGTTTCTATTCGTCACCAAGTTGCCCGTCCAGCTGTGCGCAATTTCGTGCGCAACCACCGTGGCAAGCGATTTATCACCCGCCAGCAGTGTTGGCGTCACGG                                                                                                                                                                                                                                                                                            ]
[-] EMBL BM615088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGTTCAGCCAGAAATGCTCAAAGTTTCTATTCGTCACCAGGTTGCCCGTCCAGCTGTGCGCAATTTCGTGCGCTACCACCGTGGCAAGCGATTTATCACCCGCCAGCAGTGTTGGCGTTACGAACGTCAGGCAAGGATTCTCCATACCTCCGAACGGGAAGCTTGGCGGCATTACCAGCAAATCGTACCGCTCCCAAACGTACGGACCACAGATTTCCTCCGCCTTCGCGATGAAATCGGCCGTTTGGGAAAATTCCTCTGCCGCCTCATCAATCTGCTCCTGCTCGGCCCACACGCTGGAGATAGGTCCAATTGGTTTCGACACCAGCGCACCTACCACAATTGCCAGCAGATAGCTTGGGATAGGAATTTTCTGCTGAAACTTCGATACTCCCGGTTCCGAGCGG]


>consensus_8405#0 GCACATGCTGCCTTTTGTTTNAATTTTTTTAATCTCACGTACTGCTGTTAACTTTATTTT ACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGAT GCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCC TTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCC TTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCG TCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAGTTCC GCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGCCGTC AGATCGACGATCTTTTTCTTCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACG AGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCATTTTCGGNCCACAGG GGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGG CATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTT CGGATCCTCGCGGAACCACTCGTAAAGCATCTGCTTGAAGTCGTTCGTCAGCACCGACTG GTACTTGAAGCGGTCCAGGTAGGCACGGAAGAACGGCTCAAACTTGGACGGTCCGCCTAG CAGATCTTCCAGGTAGCGCAAGAACGTCGAGCCCTTAATATACGGCACGGTGGAGAAGGC ATCGTCCGGTCCACACTCCGACAGATCTACGACGAGCTTCGTCAGCTCGGGCGTGTCGGC CAGTTGAGTTTTAATACAATCCGACAGCTCGCTTAAACCGTGCAGGGCGTGAAAATCGCG CGACGCATTGCCGGACAACCGTCCGACGATCTTTCCCTCGACGAACACGGTAAAGCCTTC GTTCAGCCAGAAATGCTCAAAGTTTCTATTCGTCACCAAGTTGCCCGTCCAGCTGTGCGC AATTTCGTGCGCAACCACCGTGGCAAGCGATTTATCACCCGCCAGCAGTGTTGGCGTCAC GGACGTCAGGCAAGGATTCTCCATACCTCCGAACGGGAAGCTTGGCGGCATTACCAGCAA ATCGTACCGCTCCCAAACGTACGGACCACAGATTTCCTCCGCCTTCGCGATGAAATCGGC CGTTTGGGAAAATTCCTCTGCCGCCTCATCAATCTGCTCCTGCTCGGCCCACACGCTGGA GATAGGTCCAATTGGTTTCGACACCAGCGCACCTACCACAATTGCCAGCAGATAGCTTGG GATAGGAATTTTCTGCTGAAACTTCGATACTCCCGGTTCCGAGCGG



consensusID : consensus_8405#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1411
fasta sequence
                              [TAGCTACCGACGAAGCGAGCATCAGTAGTATTCCCGAGGATGGTTTCCGAGGAACTTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGCTGAATTTGTGCTTTCTCCTGTTGGCGTGGCAAAAATAGTGTCCCTACTGTGCATGATCGTTGGTGGTATGATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTGGAATGTTACTTACATTACCATTACTACAGCCAGTGCGCTTCTAACGATGGTTTCATACTCAAGCTTTGCGCTGAATTTAATACGCACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTTTCT-ATTGATCGTATCGATC-ATC-ACGATGACGCAGTGCACTCGTGCGGTGCAAGTGGTGCAAAAAATACCCGAGGTAAGTCGCTCTCCCGCCACCAGCCTTATCCGATTTTGGCTCTCTTTTAAACGGTTACTCCTTCCTCTCTTCAAAAGCCGTTAACTATGATAGCCGCCTTACTGCTGGCCGTTAGTGGAACCGTTTTGTTCCTTCGATGGAGAACGACGGTCCAGACGGAGGAGCTGCAGTTACACGCGAGTGAGCGAAACATTTCCGATATTCGTACCACTCCGAGTGAGCCACGAAAATCCGTCATGGTGTAATTAATCTCACGTATTGCTGTTAACTTTATTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAGTTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGCCGTCAGATCGACGATCTTTTTCTTCTCCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACGAGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCATTTTCGGCCCACAGGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCAAGAAGTCGTTCGTCAGCACCGACTGGTACTTGAAGCGGTCCAGCCCACGCGTCCGCGG]

[+] EMBL CNS08ERW             [TAGCTACCGACGAAGCGAGCATCAGTAGTATTCCCGAGGATGGTTTCCGAGGAACTTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGCTGAATTTGTGCTTTCTCCTGTTGGCGTGGCAAAAATAGTGTCCCTACTGTGCATGATCGTTGGTGGTATGATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTGGAATGTTACTTACATTACCATTACTACAGCCAGTGCGCTTCTAACGATGGTTTCATACTCAAGCTTTGCGCTGAATTTAATACGCACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTTTCTAATTGATCGTATCGATCGATCGACGATGACGCAGTGCACTCGTGCGGTGCAAGTGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BX620747             [                                                                                                                                                                                                                                CTTACATTACCATTACTACAGCCAGTGCGGTTCTAACGATGGTTTCATACTCAAGCTTNGCGCTGAATTTAATACGCACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTTTCT TTTGATCGTATCGATC ATC ACGATGACGCAGTGCACTCGTGCGGTGCAAGTGGTGCAAAAAATACCCGAGGTAAGTCGCTCTCCCGCCACCAGCCTTATCCGATTTTGGCTCTCTTTTAAACGGTTACTCCTTCCTCTCTTCAAAAGCCGTTAACTATGATAGCCGCCTTACTGCTGGCCGTTAGTGGAACCGTTTTGTTCCTTCGATGGAGAACGACGGTCCAGACGGAGGAGCTGCAGTTACACGCGAGTGAGCGAAACATTTCCGATATTCGTACCACTCCGAGTGAGCCACGAAAATCCGTCATGGTGTAATTAATCTCACGTATTGCTGTTAACTTTATTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCANGNGGAAGTTGCTATTCGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BX615188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTTAACTTTATTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAGTTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGCCGTCAGATCGACGATCTTTTTCTTCTCCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACGAGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCATTTTCGGCCCACAGGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCAAGAAGTCGTTCGTCAGCACCGACTGGTA                              ]
[-] EMBL BM640057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAGTTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTGTCGCCCAGCAGCGCCACCTTCTCCGCCGTCAGATCGACGATCTTTTTCTTCTCCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACGAGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCATTTTCGGCCCAGAGGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCTTGAAGTCGTTCGTCAGCACCGACTGGTACTTGAAGCGGTCCAGCCCACGCGTCCGCGG]
[-] EMBL BX612383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACCTACTTCATGCGGAAGTTGCTATTCGCCCAGGCGAGTATTTCGTCCATTTTCTCGTTCAGCCGGGCACGTATGTACAGCCGCACGGACCGGTACCGCAGTTCCGCGTTCTTCGTCGTGCTGGAGCCGTACGTCTCGCCCAGCAGCGCCCCCTTCTCCGCCGTCAGATCGACGTTCTTTTTCTTCTC                                                                                                                                                                                                                                                                                                                        ]


>consensus_8405#1 TAGCTACCGACGAAGCGAGCATCAGTAGTATTCCCGAGGATGGTTTCCGAGGAACTTGCG TGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGCTGAATTTGTGCTTTC TCCTGTTGGCGTGGCAAAAATAGTGTCCCTACTGTGCATGATCGTTGGTGGTATGATTTT CATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTGGAATGTTACTTACATTACCATTAC TACAGCCAGTGCGCTTCTAACGATGGTTTCATACTCAAGCTTTGCGCTGAATTTAATACG CACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCTGGCCGTATCGTACATCGTGTT CTTCTTTCTATTGATCGTATCGATCATCACGATGACGCAGTGCACTCGTGCGGTGCAAGT GGTGCAAAAAATACCCGAGGTAAGTCGCTCTCCCGCCACCAGCCTTATCCGATTTTGGCT CTCTTTTAAACGGTTACTCCTTCCTCTCTTCAAAAGCCGTTAACTATGATAGCCGCCTTA CTGCTGGCCGTTAGTGGAACCGTTTTGTTCCTTCGATGGAGAACGACGGTCCAGACGGAG GAGCTGCAGTTACACGCGAGTGAGCGAAACATTTCCGATATTCGTACCACTCCGAGTGAG CCACGAAAATCCGTCATGGTGTAATTAATCTCACGTATTGCTGTTAACTTTATTTTACCA TACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGATGCAT CCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCCTTTA CGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCCTTGT ACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCGTCCA TTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAGTTCCGCGT TCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGCCGTCAGAT CGACGATCTTTTTCTTCTCCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCTAACGA GGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCAAATCATTTTCGGCCCACAGGG TAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGATGACGGGTGGCA TTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCACTTCATTGTTCG GATCCTCGCGGAACCACTCGTAAAGCATCTGCAAGAAGTCGTTCGTCAGCACCGACTGGT ACTTGAAGCGGTCCAGCCCACGCGTCCGCGG



consensusID : consensus_8405#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 891
fasta sequence
                              [GGCAGAATCGGCACGAGGAGCGAGCATCAGTAGTATTCCCGAGGATGGTTTCCGAGGAACTTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGGCTGAATTTGTGCTTTCTCCTGTTGGCGTGGCAAAAATAGTATCCCTACTGTGCATGATCGTTGGTGGTATGATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTGGTGTGTTTTTGTAGTGTGCTTCCATCCATTGCAAACCCAATGGAATATGCTAAGAGAAAACGTATTTTATTGCAGGAATGTTACTTACATTACCATTACTACAGCCAGTGCGCTTCTAACGATGGTTTCATACTCAAGCTTTGCGCTGAATTTAATACGCACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTTTCTTTTGATCGTATCGATCATCACGATGACGCAGTGCACTCGTGCGGTGCAAGTGGTGCAAGAAAATACCCGAGCCGTTAACTATGATAGCCGCCTTACTGCTGGCCGTTAGTGGAACAGTTTTGTTCCTTCGATGGAGAACGACAGTCCAGACGGAGGAGCTGCAGTTACACGCGAGTGAGCGAAATATTTCCCGATATTCCGTACCNACTTCCCGAAGCGAGCCACGGAAAAATCCCGTCATGGGTGTAAATTAATCCTCACCGTTACTGGTTGTTAACCTTTTATTTTTACCATTACCGAAAAATCGGTAACCCTTTANAAAGANACAGAACGGAGACAGACAGACACCAGGGCATTTTTGCACGCGCCCGGAAAGGTTATTTACCCCTTTAAGNGCAAAGGGGGTNCACATTTANAGCGCTGGGACACTGGGCCGACGNT]

[+] EMBL BX468391             [GGCAGAATCGGCACGAGGAGCGAGCATCAGTAGTATTCCCGAGGATGGTTTCCGAGGAACTTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGGCTGAATTTGTGCTTTCTCCTGTTGGCGTGGCAAAAATAGTATCCCTACTGTGCATGATCGTTGGTGGTATGATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTGGTGTGTTTTTGTAGTGTGCTTCCATCCATTGCAAACCCAATGGAATATGCTAAGAGAAAACGTATTTTATTGCAGGAATGTTACTTACATTACCATTACTACAGCCAGTGCGCTTCTAACGATGGTTTCATACTCAAGCTTTGCGCTGAATTTAATACGCACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTTTCTTTTGATCGTATCGATCATCACGATGACGCAGTGCACTCGTGCGGTGCAAGTGGTGCAAGAAAATACCCGAGCCGTTAACTATGATAGCCGCCTTACTGCTGGCCGTTAGTGGAACAGTTTTGTTCCTTCGATGGAGAACGACAGTCCAGACGGAGGAGCTGCAGTTACACGCGAGTGAGCGAAATATTTCCCGATATTCCGTACCNACTTCCCGAAGCGAGCCACGGAAAAATCCCGTCATGGGTGTAAATTAATCCTCACCGTTACTGGTTGTTAACCTTTTATTTTTACCATTACCGAAAAATCGGTAACCCTTTANAAAGANACAGAACGGAGACAGACAGACACCAGGGCATTTTTGCACGCGCCCGGAAAGGTTATTTACCCCTTTAAGNGCAAAGGGGGTNCACATTTANAGCGCTGGGACACTGGGCCGACGNT]


>consensus_8405#2 GGCAGAATCGGCACGAGGAGCGAGCATCAGTAGTATTCCCGAGGATGGTTTCCGAGGAAC TTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGGCTGAATTTGT GCTTTCTCCTGTTGGCGTGGCAAAAATAGTATCCCTACTGTGCATGATCGTTGGTGGTAT GATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTGGTGTGTTTTTGTAGTGTG CTTCCATCCATTGCAAACCCAATGGAATATGCTAAGAGAAAACGTATTTTATTGCAGGAA TGTTACTTACATTACCATTACTACAGCCAGTGCGCTTCTAACGATGGTTTCATACTCAAG CTTTGCGCTGAATTTAATACGCACGGATCGTGGACTTAGAACGCAGCACATCTCCGTGCT GGCCGTATCGTACATCGTGTTCTTCTTTCTTTTGATCGTATCGATCATCACGATGACGCA GTGCACTCGTGCGGTGCAAGTGGTGCAAGAAAATACCCGAGCCGTTAACTATGATAGCCG CCTTACTGCTGGCCGTTAGTGGAACAGTTTTGTTCCTTCGATGGAGAACGACAGTCCAGA CGGAGGAGCTGCAGTTACACGCGAGTGAGCGAAATATTTCCCGATATTCCGTACCNACTT CCCGAAGCGAGCCACGGAAAAATCCCGTCATGGGTGTAAATTAATCCTCACCGTTACTGG TTGTTAACCTTTTATTTTTACCATTACCGAAAAATCGGTAACCCTTTANAAAGANACAGA ACGGAGACAGACAGACACCAGGGCATTTTTGCACGCGCCCGGAAAGGTTATTTACCCCTT TAAGNGCAAAGGGGGTNCACATTTANAGCGCTGGGACACTGGGCCGACGNT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8405#1      ------------------------------------------------------------
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      GCACATGCTGCCTTTTGTTTNAATTTTTTTAATCTCACGTACTGCTGTTAACTTTATTTT 60
                                                                                  

consensus_8405#1      ------------------------------------------------------------
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      ACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTGCACCCCTTAAGCCGAT 120
                                                                                  

consensus_8405#1      ------------------------------------------------------------
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      GCATCCGAAATGCCCAAATCCTTCGCAACCGTGTAGGCGCAAACCGTCATCATCTGATCC 180
                                                                                  

consensus_8405#1      ------------------------------------------------------------
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      TTTACGCGGTTGTAGTTCTCGATGGCGATGGGTCTCGCTTGGGGCCAGGCGCCCAGTTCC 240
                                                                                  

consensus_8405#1      --------TAGCTACCGACGAAGCGAGCATCAGTAG-TATTCCCGAGGATG-GTTTCCGA 50
consensus_8405#2      ---GGCAGAATCGGCACGAGGAGCGAGCATCAGTAG-TATTCCCGAGGATG-GTTTCCGA 55
consensus_8405#0      TTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCGCAAAGGCGAGAATTTCG 300
                                    *        *  **   *** * ***** * * *  * *  *    

consensus_8405#1      GGAACTTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGG-CTGAA 109
consensus_8405#2      GGAACTTGCGTGAAAATTGAATTCAAGCCGTTTGTAGAATGTTGCAGACCGGGGGCTGAA 115
consensus_8405#0      TCCATTTTCTCGA----TCAGCCGGGCACGTATGAACAGCCGCACGAACCGGAACCGCAG 356
                         * ** *  **    * *        *** ** * *      *  *****   *  * 

consensus_8405#1      TTT---GTGCTTTCTCCTGTTGGCGTGGCAAAAATAGTGTCCCTACTGTGCATGATC-GT 165
consensus_8405#2      TTT---GTGCTTTCTCCTGTTGGCGTGGCAAAAATAGTATCCCTACTGTGCATGATC-GT 171
consensus_8405#0      TTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCGCCACCTTCTCCGC 416
                      **    ** ***  ** ** **  *  * *    * *     *  *    * *  ** * 

consensus_8405#1      TGGTGGTATGATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTG--G------ 217
consensus_8405#2      TGGTGGTATGATTTTCATCACTGCCGGAGATTGCGTGGAGTCCAGAGTTTG--GTGTGTT 229
consensus_8405#0      CGTCAGATCGACGATCTTTTTCTTCAGCAACTGCGCAAGAAACTCGATCAGCTGCACGCT 476
                       *   *   **   ** *      * *  * ****       *    *  *  *      

consensus_8405#1      ------------------------------------------------------------
consensus_8405#2      TTTGTAGTGTGCTTCCATCCATTGCAAACCCAATGGAATATGCTAAGAGAAAACGTATTT 289
consensus_8405#0      AACGAGGCTTTGCTTCACCAGCGGCGAATTT--TTGATCGTGTCCAAATCAT---TTTCG 531
                                                                                  

consensus_8405#1      ---------AATGTTACTTACATTACCATTACTACAGC-CAGTGCGCTTCTAACGATGGT 267
consensus_8405#2      TATTGCAGGAATGTTACTTACATTACCATTACTACAGC-CAGTGCGCTTCTAACGATGGT 348
consensus_8405#0      GNCCACAGGGGTAGCATGTGC-TAGGCATGCCTCCAGCATCGAACGATCGTAACTTGGGA 590
                                 *   *  * * *   ***  ** ****   *  ** *  ****   ** 

consensus_8405#1      TT-CATACTCAAGCTTTGCGCTGAAT--TTAATACGCACGGATCGTGGACTTAGAACGCA 324
consensus_8405#2      TT-CATACTCAAGCTTTGCGCTGAAT--TTAATACGCACGGATCGTGGACTTAGAACGCA 405
consensus_8405#0      TGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCTCGAGCAGCA 650
                      *  *       *    * ***  **     *  *  * * * *  *   **      ***

consensus_8405#1      GCACATC-------TCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTT-TCTATTGATC 376
consensus_8405#2      GCACATC-------TCCGTGCTGGCCGTATCGTACATCGTGTTCTTCTT-TCTTTTGATC 457
consensus_8405#0      CTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCTTGAAGTCGTTCGTCA 710
                         ***        ***  ** *  *   ***** * * * * ***    **  * *   

consensus_8405#1      GTATCGATCATCACGATGACGCAGTGCACTCGTGCGGTGCA-AGTGGTGCAA----AAAA 431
consensus_8405#2      GTATCGATCATCACGATGACGCAGTGCACTCGTGCGGTGCA-AGTGGTGCAAG---AAAA 513
consensus_8405#0      GCACCGACTGGTACT-TGAAGCGGTCCAGGTAGGCACGGAAGAACGGCTCAAACTTGGAC 769
                      * * ***     **  *** ** ** **     **   * * *  **  ***      * 

consensus_8405#1      TACCCG---AGGTAAGTCGCTCTCCCGCCACCAGCCTTATCCGATTTTGGCTCTCTTTTA 488
consensus_8405#2      TACCCG---AG------------------------------------------------- 521
consensus_8405#0      GGTCCGCCTAGCAGATCTTCCAGGTAGCGCAAGAACGTCGAGCCCTTAATATACGGCACG 829
                         ***   **                                                 

consensus_8405#1      AACGGTTACTCCTTCCTCTCTTCAAAAGCCGTTAA--CTATGATAGCCGCCTTACTGCTG 546
consensus_8405#2      ----------------------------CCGTTAA--CTATGATAGCCGCCTTACTGCTG 551
consensus_8405#0      GTGGAGAAGGCATCGTCCGGTCCACACTCCGACAGATCTACGACGAGCTTCGTCAGCTCG 889
                                                  ***  *   *** **    *  * *      *

consensus_8405#1      GCCGTTAGTGGAACCGTTTTGTTCCTTCGATGGAGAACGACGGTCCAGACGGAGGAGCTG 606
consensus_8405#2      GCCGTTAGTGGAACAGTTTTGTTCCTTCGATGGAGAACGACAGTCCAGACGGAGGAGCTG 611
consensus_8405#0      GGCGT--GTCGGCCAGTTGAGTT---TTAATACAATCCGACAGCTCG--CTTAAACCGTG 942
                      * ***  ** *  * ***  ***   *  **  *   **** *  *   *  *     **

consensus_8405#1      CAGTTACACGCGAGT-GAGCGAAACATTTCC-GATATTC-GT--ACCA----CTCCGAGT 657
consensus_8405#2      CAGTTACACGCGAGT-GAGCGAAATATTTCCCGATATTCCGT--ACCNACTTCCCGAAGC 668
consensus_8405#0      CAGG-GCGTGAAAATCGCGCGACGCATTGCCGGACAACCGTCCGACGATCTTTCCCTCGA 1001
                      ***   *  *  * * * ****   *** ** ** *  *     **        *   * 

consensus_8405#1      GAGCCACGAAAATCCGTCATGGTGTAATTAATCT-----CACGTATTGCTGTTAACTTTA 712
consensus_8405#2      GAGCCACGGAAAAATCCCGTCATGGGTGTAAATT-----AATCC-TCACCGTTA-CTGGT 721
consensus_8405#0      CGAACACGGTAAAGCCTTCGTTCAGCCAGAAATGCTCAAAGTTTCTATTCGTCACCAAGT 1061
                          ****  **                 **              *    ** * *    

consensus_8405#1      TTTTACCATACAAATCGTACCTTATTGCGCGGGTTCTGAAATGCACTG-CACCCCTTAAG 771
consensus_8405#2      TGTTAACCTTTTATTTTTACC--ATTAC-CGAA-----AAATCGGTAA-CCCTTTANAAA 772
consensus_8405#0      TGC---CCGTCCAGCTGTGCGCAATTTCGTGCGCAACCACCGTGGCAAGCGATTTATCAC 1118
                      *     *     *    * *   *** *  *       *          *        * 

consensus_8405#1      CCGATGC-ATCCGAAATG-CCCAAAT-CCTTCGCA--ACCGTGTAGGCGCAAACCGTCAT 826
consensus_8405#2      GANACAG-AACGGAGACA-GACAGACACCAGGGCA--TTTTTGCACGCGCCCGGAAAGGT 828
consensus_8405#0      CCGCCAGCAGTGTTGGCGTCACGGACGTCAGGCAAGGATTCTCCATACCTCCGAACGGGA 1178
                              *            *  *   *     *      *  *  *            

consensus_8405#1      CATCTGATC-CTTTA--CGCGGTTGTAGTTC---TCGATGGCGATGGG-TCTCGCTTGGG 879
consensus_8405#2      TATTTACCC-CTTTAAGNGCAAAGGGGGTNCACATTTANAGCGCTGGG-ACAC---TGGG 883
consensus_8405#0      AGCTTGGCGGCATTACCAGCAAATCGTACCGCTCCCAAACGTACGGACCACAGATTTCCT 1238
                          *     * ***   **                 *  *    *    *     *   

consensus_8405#1      GCCAGGCGCCCAGTTCCTTGTACACCGGGCGCACAAACTTCATGCGGAAGTTGCTATTCG 939
consensus_8405#2      CCGACGNT---------------------------------------------------- 891
consensus_8405#0      CCGCCTTCGCGATGAAATCGGCCGTTTGGGAAAATTCCTCTGCCGCCTCATCAATCTGCT 1298
                       *                                                          

consensus_8405#1      CAAAGGCGAGAATTTCGTCCATTTTCTCGATCAGCCGGGCACGTATGAACAGCCGCACGA 999
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      CCTGCTCGGCCCACACGCTGGAGATAGGTCCAATTGGTTTCGACACCAGCGCACCTACCA 1358
                                                                                  

consensus_8405#1      ACCGGAACCGCAGTTCCGCGTTCTTCGTCGTGCTGAAGCCGTACGTCTCGCCCAGCAGCG 1059
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      CAATTGCCAGCAGATAGCTTGGGATAGGAATTTTCTGCTGAAACTTCGATACTCCCGGTT 1418
                                                                                  

consensus_8405#1      CCACCTTCTCCGCCGTCAGATCGACGATCTTTTTCTTCTCCAGCAACTGCGCAAGAAACT 1119
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      CCGAGCGG---------------------------------------------------- 1426
                                                                                  

consensus_8405#1      CGATCAGCTGCACGCTAACGAGGCTTTGCTTCACCAGCGGCGAATTTTTGATCGTGTCCA 1179
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      ------------------------------------------------------------
                                                                                  

consensus_8405#1      AATCATTTTCGGCCCACAGGGTAGCATGTGCTAGGCATGCCTCCAGCATCGAACGATCGT 1239
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      ------------------------------------------------------------
                                                                                  

consensus_8405#1      AACTTGGGATGACGGGTGGCATTCCTTCGCCAAACAGCCATAAATCCCAGTTGATACGCT 1299
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      ------------------------------------------------------------
                                                                                  

consensus_8405#1      CGAGCAGCACTTCATTGTTCGGATCCTCGCGGAACCACTCGTAAAGCATCTGCAAGAAGT 1359
consensus_8405#2      ------------------------------------------------------------
consensus_8405#0      ------------------------------------------------------------
                                                                                  

consensus_8405#1      CGTTCGTCAGCACCGACTGGTACTTGAAGCGGTCCAGCCCACGCGTCCGCGG 1411
consensus_8405#2      ----------------------------------------------------
consensus_8405#0      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)