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Anopheles gambiae
cluster # 8407 cluster # 8407       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8407#0 length = 1315 sequences # 8  
consensus_8407#1 length = 875 sequences # 1  
consensus_8407#2 length = 652 sequences # 1  

consensusID : consensus_8407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1315
fasta sequence
                              [CCGAAACAACAGAAAACGTGCTCCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTC-GTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGG-CCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCACATC-AAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTA-GTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAG-CAAACGATGGTCAAGCGAATCCGTGGTACGGCGTACTGCTGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAAGGGGAAACGGTCGGGAAACAG---CCCCGGGTATGGCATTAACCTGGTGGCCGAAACCACCGACGGTACCATGTTTTCCGCGGAAGCTATTTGCAAAACAATGGACGAGCAACAAGGCAACCCATCCATACCGGAAGATCTTGGCCGAGA-GCT-GGCATGAAGCTGTTGGACGAGGTGTTCCGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGGCGTTGGCGCAGAAGGATGTGTCCAAGTTTCTTATT-GGACCGCTATCGCAATACACCATCCATTTCCTGCAGCATTTGCGCGAGTTTTTCGCCATCACTTTTAAGCTAGAAAATGCAAACGGTGACCAGGAGGATGAGACGGCGGGAAGGGATGACGAAGAACTGTCTGGGTCTAACAAGGTGATGCTTACGTGTGTCGGTGTAGGGTACAGTAATTTCAGCAAGCGTGTCAACTAATCGGGAAAGGAAAAGGCTTTGGGAGAGTTTTCCTTATAATACGACTGGTGGAATAAATTCCTTCTTT]

[+] EMBL BM653753             [CCGAAACAACAGAAAACGTGCTCCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTC GTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGG CCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCACATC AAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTA GTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAG CAAACGATGGTCAAGCGAATCCGTGGTACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09MMC             [                    CTCCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTC GTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGG CCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCACATC AAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTA GTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAG CAAACGATGGTCAAGCGAATCCGTGGTACGGCGTACTGCTGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAAGGGGAAACGGTCGGGAAACAG   CCCCGGGTATGGCATTAACCTGGTGGCCGAAACCACCGACGGTACCATGTTTTCCGCGGAAGCTATTTGCAAAACAATGGACGAGCAACAAGGCAACCCATCCATACCGGAAGATCTTGGCCGAGA GCTGGGCATGAAGCTGTTGGACGAGGTGTTCCGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGGCGTTGGCGCAGAAGGATGTGTCCAAGTTTCTTATT GGAAAGCTAT                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09IZC             [                      CCG CGGTGAACAGACG AGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACGGGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTCTGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGGTCGG CCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCACATC AAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTATGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAG CAAACGATGGTCAAGCGAATCCGTGGTACGGCGTACTGCCGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAAGGGGAAACGGTCGGGAAACAG   CCCCGGGTATGGCATTAACCTGGTGGCCGAAACCACCGACGGTACCATGTTTTCCGCGGAA CTATTTGC AAACAATGGACGAGCAACAAGGCAACCTTTCCATACCGGAAGATCTTGGCCGAGA GCT GGCATGAAGCTGTTGGACGAGGTGTTCCGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX622301             [                                               CGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTC GTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGG CCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCACATC AAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTA ATTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09MMD             [                                                                                                                                                                                                                                                                                                           GATGTTC GTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATAACATC AAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTA GTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAG CAAACGATGGTCAAGCGAATCCGTGGTACGGCGTACTGCTGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAAGGGGAAACGGTCGGGAAACAG   CCCCGGGTATGGCATTAACCTGGTGGCCGAAACCACCGACGGTACCATGTTTTCCGCGGAAGCTATTTGCAAAACAATGGACGAGCAACAAGGCAACCCATCCATACCGGAAGATCTTGGCCGAGAGGCT GGCATGAAGCTGTTGGACGAGGTGTTCCGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGGCGTTGGCGCAGAAGGATGTGTCCAAGTTTCTTATTGGGCCCGCTATCGCAATACACCATCCATTTCCTGCAGCATTTGCGCGAGTTTTTCGCCATCACTTTTAAGCTAGAAAATGCAAACGGTGACCAGGAGGATGAGACGGCGGGAAGGGATGACGAAGAACTGTCTGGGTCTAACAAGGTGATGCTTACGTGTGTCGGTGTAGGGTACAGTAATTTCAGCAAGCGTGTCAACTAATCGGGAAAGGAAAAGGCTTTGGGAGAGTTTTCCTTATAATACGACTGGTGGAATAAATT        ]
[-] EMBL CNS09IZD             [                                                                                                                                                                                                                                                                                                                                                                                                                       GG CCCC TTTAAAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATAACATCAAAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTA GTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAGACAAACGATGGTCAAGCGAATCCGTGGTACGGCGTACTGCCGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAAGGGGAAACGGTCGGGAAACAGACACACCGGGTATGGCATTAACCTGGTGGCCGAAACCACCGACGGTACCATGTTTTCCGCGGAAGCTATTTGCAAAACAATGGACGAGCAACAAGGCAACCCATCCATACCGGAAGATCTTCGCCGAGAGGCT GGCATGAAGCTGTTGGACGAGGTGTTCCGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGGCGTTGGCGCAGAAGGATGTGTCCAAGTTTCTTATT GGGCCG TATCGCAATACCCCATCCATTTCCTGCAGCATTTGCGCGAGTTTTTCGCCATCACTTTTAAGCTAGAAAATGCAAACGGTGACCAGGAGGATGAGACGGCGGGAAGGGATGACGAAGAACTGTCTGGGTCTAACAAGGTGATGCTTACGTGTGTCGGTGTAGGGTACAGTAATTTCAGCAAGCGTGTCAACTAATCGGGAAAGGAAAAGGCTTTGGGAGAGTTTTCCTTATAATACGACTGGTGGAATACGCCCCTTCTTT]
[+] EMBL CNS09GJJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGCCGGGAGGGGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAG CAAACGATGGTCAAGCGAATCCGTGGTACGGCGTACTGCTGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09GJK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGAGCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCATAAGGGGAAACGGTCGGGAAACAG   CCCCGGGTATGGCATTAACCTGGGGGCCGAAACCACCGACGGTACCATGGTTCCCGCGGAAGCCATTGGCAAAACAATGGACGAGCAACAAGGCAACCCATC                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_8407#0 CCGAAACAACAGAAAACGTGCTCCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTT CGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGA GGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGA AGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAA TCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGG ATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAG CACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCTTTTGCAA AAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGA TCACATCAAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTAGTTGTCGACGAAGGGCT TGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCG CTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAGCAAACGATGGTCAAGCG AATCCGTGGTACGGCGTACTGCTGCAAAGTTAGTCCCGCGATGGCAAATCGGGCGGTGGA GCATGCGAAAGGCGTGATGCTAAACTTTCTGCCCGATGTGTACATCAACACGGACCAGCA TAAGGGGAAACGGTCGGGAAACAGCCCCGGGTATGGCATTAACCTGGTGGCCGAAACCAC CGACGGTACCATGTTTTCCGCGGAAGCTATTTGCAAAACAATGGACGAGCAACAAGGCAA CCCATCCATACCGGAAGATCTTGGCCGAGAGCTGGCATGAAGCTGTTGGACGAGGTGTTC CGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGGCGTTGGCG CAGAAGGATGTGTCCAAGTTTCTTATTGGACCGCTATCGCAATACACCATCCATTTCCTG CAGCATTTGCGCGAGTTTTTCGCCATCACTTTTAAGCTAGAAAATGCAAACGGTGACCAG GAGGATGAGACGGCGGGAAGGGATGACGAAGAACTGTCTGGGTCTAACAAGGTGATGCTT ACGTGTGTCGGTGTAGGGTACAGTAATTTCAGCAAGCGTGTCAACTAATCGGGAAAGGAA AAGGCTTTGGGAGAGTTTTCCTTATAATACGACTGGTGGAATAAATTCCTTCTTT



consensusID : consensus_8407#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 875
fasta sequence
                              [GCCAGAATCGGCACGTGGGGTAAAACACAGAAAACGTCGCTCCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCAGCATCAAAGCGTCCGACTGCGGGCACTGAAGCGCTTTCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCNAAACGGGGGCATAAATGCCGGGAGGCCGGTGCGAGAGATCAACATTTCCGCTGTCCCGGTACGCAAATCGGTCNAAAGGCAATCCANGTGGTACGAAGCAACGATGGTTCAGGGGAATCCGGGGTACNCGGAGTACTGGGTGCAACAGTTCGGTTCCCGAGAATGGGNAAAATCNGGGGCGGGTGGAGCATTGNGAAAGGCGTTGAATGNTGAACGTNTCGCTGGCCCGNANTTNTACTCAAGCGANGGNCAGGCNATAAGGGGAAACGGGATCGGGAACACGACCCGGGCTANGGGCA]

[+] EMBL BX467909             [GCCAGAATCGGCACGTGGGGTAAAACACAGAAAACGTCGCTCCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGAAAGCCCGTCGGTGGATCAGCATCAAAGCGTCCGACTGCGGGCACTGAAGCGCTTTCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCNAAACGGGGGCATAAATGCCGGGAGGCCGGTGCGAGAGATCAACATTTCCGCTGTCCCGGTACGCAAATCGGTCNAAAGGCAATCCANGTGGTACGAAGCAACGATGGTTCAGGGGAATCCGGGGTACNCGGAGTACTGGGTGCAACAGTTCGGTTCCCGAGAATGGGNAAAATCNGGGGCGGGTGGAGCATTGNGAAAGGCGTTGAATGNTGAACGTNTCGCTGGCCCGNANTTNTACTCAAGCGANGGNCAGGCNATAAGGGGAAACGGGATCGGGAACACGACCCGGGCTANGGGCA]


>consensus_8407#1 GCCAGAATCGGCACGTGGGGTAAAACACAGAAAACGTCGCTCCGCCGGTGAACAGACGAA GCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAAA AAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGC TGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGC TGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCA CCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCG TCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTG CGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCA AAGAAAGCCCGTCGGTGGATCAGCATCAAAGCGTCCGACTGCGGGCACTGAAGCGCTTTC TAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCNAAACGGGGGCATAAATGCCGGGAG GCCGGTGCGAGAGATCAACATTTCCGCTGTCCCGGTACGCAAATCGGTCNAAAGGCAATC CANGTGGTACGAAGCAACGATGGTTCAGGGGAATCCGGGGTACNCGGAGTACTGGGTGCA ACAGTTCGGTTCCCGAGAATGGGNAAAATCNGGGGCGGGTGGAGCATTGNGAAAGGCGTT GAATGNTGAACGTNTCGCTGGCCCGNANTTNTACTCAAGCGANGGNCAGGCNATAAGGGG AAACGGGATCGGGAACACGACCCGGGCTANGGGCA



consensusID : consensus_8407#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 652
fasta sequence
                              [CCGCGGACGCGTGGGCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCTTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGGAAGCCCGTCGGTGGATCACATCAAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAGTAAACGATGGTCAAGCG]

[+] EMBL BM618523             [CCGCGGACGCGTGGGCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCTTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGCAAAGGAAGCCCGTCGGTGGATCACATCAAAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGGTACGCAAATCGCTCAAAGCAATCCAGTGTACGAAGTAAACGATGGTCAAGCG]


>consensus_8407#2 CCGCGGACGCGTGGGCGCCGGTGAACAGACGAAGCTGAACGGTATTTTCTTTCGCCTTGC TGTGCTTCATCATGACCTGTGTTGGGAAGGAAAAAGGTTGTCTCATATACGAGGGGAGTA ACTTCCTTAAACAACGACTGCTGCTTTCCACGCTGAGCGGAAAATCGATCGAAGTACGCG AGATTCGACCCCATCACGAAACGAACCCGGGGCTGCAGGAGTACGAAACGAATCTGCTCC AGCTGCTGGACAAGATTACCAACGGTACGATCACCCGTGTGGACCGGGATGGATGTTCGT TCGTGTATCAGCCGGGGCTACTGTACGGTGGCGTCATCCATCACGATTGTAGCACGGAAC GGGGCATCGGATACTACCTAGACGTACTGGTTGCGCTCGGCCCCTTTTGCAAAAAGCCCC TCGATGTCACACTGACCGGCGTGACGAATAGCAAAGGAAGCCCGTCGGTGGATCACATCA AAGCGTCCGCACTGCCGGCACTGAAGCGCTTTCTAGTTGTCGACGAAGGGCTTGAGCTGA AGGTCCTCAAACGGGGCATAATGCCGGGAGGCGGTGGAGAGATCACATTCCGCTGTCCGG TACGCAAATCGCTCAAAGCAATCCAGTGTACGAAGTAAACGATGGTCAAGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8407#0      -------------------CCGAAACAACAGAAAACGTGCTC-CGCCGGTGAACAGACGA 40
consensus_8407#2      ----------------------------CCGCGGACGCGTGGGCGCCGGTGAACAGACGA 32
consensus_8407#1      GCCAGAATCGGCACGTGGGGTAAAACA-CAGAAAACGTCGCTCCGCCGGTGAACAGACGA 59
                                                  * *   ***      *****************

consensus_8407#0      AGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAA 100
consensus_8407#2      AGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCTTCATCATGACCTGTGTTGGGAAGGAA 92
consensus_8407#1      AGCTGAACGGTATTTTCTTTCGCCTTGCTGTGCCTCATCATGACCTGTGTTGGGAAGGAA 119
                      ********************************* **************************

consensus_8407#0      AAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACG 160
consensus_8407#2      AAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACG 152
consensus_8407#1      AAAGGTTGTCTCATATACGAGGGGAGTAACTTCCTTAAACAACGACTGCTGCTTTCCACG 179
                      ************************************************************

consensus_8407#0      CTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGG 220
consensus_8407#2      CTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGG 212
consensus_8407#1      CTGAGCGGAAAATCGATCGAAGTACGCGAGATTCGACCCCATCACGAAACGAACCCGGGG 239
                      ************************************************************

consensus_8407#0      CTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATC 280
consensus_8407#2      CTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATC 272
consensus_8407#1      CTGCAGGAGTACGAAACGAATCTGCTCCAGCTGCTGGACAAGATTACCAACGGTACGATC 299
                      ************************************************************

consensus_8407#0      ACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGC 340
consensus_8407#2      ACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGC 332
consensus_8407#1      ACCCGTGTGGACCGGGATGGATGTTCGTTCGTGTATCAGCCGGGGCTACTGTACGGTGGC 359
                      ************************************************************

consensus_8407#0      GTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTT 400
consensus_8407#2      GTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTT 392
consensus_8407#1      GTCATCCATCACGATTGTAGCACGGAACGGGGCATCGGATACTACCTAGACGTACTGGTT 419
                      ************************************************************

consensus_8407#0      GCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGC 460
consensus_8407#2      GCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGC 452
consensus_8407#1      GCGCTCGGCCCCTTTTGCAAAAAGCCCCTCGATGTCACACTGACCGGCGTGACGAATAGC 479
                      ************************************************************

consensus_8407#0      AAAGAAAGCCCGTCGGTGGATCA-CATCAAAGCGTCCGCACTGCCGGCACTGAAGCGCTT 519
consensus_8407#2      AAAGGAAGCCCGTCGGTGGATCA-CATCAAAGCGTCCGCACTGCCGGCACTGAAGCGCTT 511
consensus_8407#1      AAAGAAAGCCCGTCGGTGGATCAGCATCAAAGCGTCCG-ACTGCGGGCACTGAAGCGCTT 538
                      **** ****************** ************** ***** ***************

consensus_8407#0      TCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAAC--GGGGCATAA-TGCCGGG 576
consensus_8407#2      TCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCAAAC--GGGGCATAA-TGCCGGG 568
consensus_8407#1      TCTAGTTGTCGACGAAGGGCTTGAGCTGAAGGTCCTCNAAACGGGGGCATAAATGCCGGG 598
                      ************************************* **   ********* *******

consensus_8407#0      AGGC-GGTG-GAGAGATCA-CATT-CCGCTGTCC-GGTACGCAAATCGCTCAAA--GCAA 629
consensus_8407#2      AGGC-GGTG-GAGAGATCA-CATT-CCGCTGTCC-GGTACGCAAATCGCTCAAA--GCAA 621
consensus_8407#1      AGGCCGGTGCGAGAGATCAACATTTCCGCTGTCCCGGTACGCAAATCGGTCNAAAGGCAA 658
                      **** **** ********* **** ********* ************* ** **  ****

consensus_8407#0      TCCAGT--GTACGAAGCAAACGATGGT-CAAGCGAATCCGTGGTACG--GCGTACTGC-T 683
consensus_8407#2      TCCAGT--GTACGAAGTAAACGATGGT-CAAGCG-------------------------- 652
consensus_8407#1      TCCANGTGGTACGAAGCAA-CGATGGTTCAGGGGAATCCGGGGTACNCGGAGTACTGGGT 717
                      ****    ******** ** ******* ** * *                          

consensus_8407#0      GCAA-AGTTAG--TCCCGCGAT---GGCAAATCGGGCG---GTGGAGCAT-GCGAAAGGC 733
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      GCAACAGTTCGGTTCCCGAGAATGGGNAAAATCNGGGGCGGGTGGAGCATTGNGAAAGGC 777
                                                                                  

consensus_8407#0      GT--GATGCTAAACTTTCTGC-----CCGATGTGTACATCAACACGGACCAG--CATAAG 784
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      GTTGAATGNTGAACGTNTCGCTGGCCCGNANTTNTACTCAAGCGANGGNCAGGCNATAAG 837
                                                                                  

consensus_8407#0      GGGAAACGG--TCGGGAA-ACAGCCCCGGGTATGG-CATTAACCTGGTGGCCGAAACCAC 840
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      GGGAAACGGGATCGGGAACACGACCCGGGCTANGGGCA---------------------- 875
                                                                                  

consensus_8407#0      CGACGGTACCATGTTTTCCGCGGAAGCTATTTGCAAAACAATGGACGAGCAACAAGGCAA 900
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      CCCATCCATACCGGAAGATCTTGGCCGAGAGCTGGCATGAAGCTGTTGGACGAGGTGTTC 960
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      CGCGGCGGTTGCGTTGACTCTGCATTCCAGTGGCTGGTCGTGCTGTACATGGCGTTGGCG 1020
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      CAGAAGGATGTGTCCAAGTTTCTTATTGGACCGCTATCGCAATACACCATCCATTTCCTG 1080
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      CAGCATTTGCGCGAGTTTTTCGCCATCACTTTTAAGCTAGAAAATGCAAACGGTGACCAG 1140
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      GAGGATGAGACGGCGGGAAGGGATGACGAAGAACTGTCTGGGTCTAACAAGGTGATGCTT 1200
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      ACGTGTGTCGGTGTAGGGTACAGTAATTTCAGCAAGCGTGTCAACTAATCGGGAAAGGAA 1260
consensus_8407#2      ------------------------------------------------------------
consensus_8407#1      ------------------------------------------------------------
                                                                                  

consensus_8407#0      AAGGCTTTGGGAGAGTTTTCCTTATAATACGACTGGTGGAATAAATTCCTTCTTT 1315
consensus_8407#2      -------------------------------------------------------
consensus_8407#1      -------------------------------------------------------
                                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)