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Anopheles gambiae
cluster # 8408 cluster # 8408       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8408#0 length = 1502 sequences # 6  
consensus_8408#1 length = 699 sequences # 1  
consensus_8408#2 length = 687 sequences # 2  
consensus_8408#3 length = 677 sequences # 1  

consensusID : consensus_8408#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1502
fasta sequence
                              [AGATCGCCNCGACNCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGCTGCCGTGCAGCTGCGGAGAAGATACA-TCGAGAAGGCTAGATTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTT--TCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAG-TAGAAATATATCCGATGGTTTCATCTACGTCCGCCAAATCGTCCGTTAAGCTTAT-AATGCTGCCTC-TTCGAAGAT-ATCTGAGGTTTCACNTG-NTGAACGCGATTTGTAAATACCCAAAGCTCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAGCTATGGTTCTTGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTACATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGATTCGGCCGATGGTAACGATTCTAAAAGACAGGATATCAATTCGGAATCGCAAATCTACGATAGCCCTATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAACCACCGCTTCATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAGATAAATACTATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTGAACCAGTGCCATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAATCATAAATTAACCCAAAATTGGGATCAAAATGTTGCTGACGAAGTAAGTAATTTTTTTTTATGTTAGCTATGTTCATTTTTTCCTACTTGTGGATTTTCCTCGAAGTCATAACCTTTTTTTACATCTAAACCTAAGTACTTCATGATATACGGCTAGTGTATGATACGTATCTTAAGTTGGCCTTAAGTAAAAATGGCTCGTTATCTTAAGTTTCGTCTAGCATTTATTTTGCAGATGTATCG]

[+] EMBL AL930220             [AGATCGCCNCGAGNTNAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGCTGCCGTGCAGCTGCGGAGAAGATACAGTCGAGAAGGCTAGATTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCA TGGTATCTACGTGGACATGTTACGTGGTACATTGGAATATTTNATCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGCTAGAAATATATCCGATGGTTTCATCTACGTCCG CAAATCGCCCGTACAGC TAT AATGCTGCCTC TTCGAAGAT ATCTGAGGTTTCACNTG NTGAACGCGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM586580             [         ccgctCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGCTGCCGTGCAGCTGCGGAGAAGATACA TCGAGAAGGCTAGATTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTT  TCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAG TAGAAATATATCCGATGGGTTCATCTACGTCCGCCAAATCGTCCGTTAAGCTTATAAATGCTGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM638201             [           ccgCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGCTGCCGTGCAGCTGCGGAGAAGATACA TCGAGAAGGCTAGATTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTT  TCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAG TAGAAATATATCCGATGGTTTCATCTACGTCCGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX602023             [                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTT  TCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAG TAGAAATATATCCGATGGTTTCATCAACGTCCGCCAAATCGTCCGTTAAGCTTATAAATGCTGCCTCTTTCGAAGATAATCTGAGGTTT AATTGCATGAAGGTGATTTGTAAATACCCAAAGCTCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAGCTATGGTTCTTGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTACATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGATTCGGCCGATGGTAACGATTCTAAAAGACAGGATATCAATTCGGAATCGCAAATCTACGATAGCCCTATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX607252             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTT  TCTTAACCGACGTTCGCTTGGCAGAG GTATTCGGGCATTCCGAGAGAAGACGGAG TAGAAATATATCCGATGGTTTCATCAACGTCCGCCAAATCGTCCGTTAAGCTTAT AAat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM626220             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgCAGAGGACTTCGCACTTAACAATTTACATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGATTCGGCCGATGGTAACGATTCCAAAGGACAGGAAATCAATTCGGAATCGCAAATCTACGATAGCCTAATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAACCACCGCTTCATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAGATAAATACTATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTGAACCAGTGCCATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAATCATAAATTAACCCAAAATTGGGATCAAAATGTTGCTGACGAAGTAAGTAATTTTTTTTTATGTTAGCTATGTTCATTTTTTCCTACTTGTGGATTTTCCTCGAAGTCATAACCTTTTTTTACATCTAAACCTAAGTACTTCATGATATACGGCTAGTGTATGATACGTATCTTAAGTTGGCCTTAAGTAAAAATGGCTCGTTATCTTAAGTTTCGTCTAGCATTTATTTTGCAGATGTATCG]


>consensus_8408#0 AGATCGCCNCGACNCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAA ATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAAC TGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACG AAGAAAATGCTGCCGTGCAGCTGCGGAGAAGATACATCGAGAAGGCTAGATTGGATATGG GATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTG TACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCAT TACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGC ACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGAC GACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTAT TATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGT ACATTGGAATATTTTCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGA GAAGACGGAGTAGAAATATATCCGATGGTTTCATCTACGTCCGCCAAATCGTCCGTTAAG CTTATAATGCTGCCTCTTCGAAGATATCTGAGGTTTCACNTGNTGAACGCGATTTGTAAA TACCCAAAGCTCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAG CTATGGTTCTTGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTA CATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGAT TCGGCCGATGGTAACGATTCTAAAAGACAGGATATCAATTCGGAATCGCAAATCTACGAT AGCCCTATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAAC CACCGCTTCATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAG ATAAATACTATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTG AACCAGTGCCATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAAT CATAAATTAACCCAAAATTGGGATCAAAATGTTGCTGACGAAGTAAGTAATTTTTTTTTA TGTTAGCTATGTTCATTTTTTCCTACTTGTGGATTTTCCTCGAAGTCATAACCTTTTTTT ACATCTAAACCTAAGTACTTCATGATATACGGCTAGTGTATGATACGTATCTTAAGTTGG CCTTAAGTAAAAATGGCTCGTTATCTTAAGTTTCGTCTAGCATTTATTTTGCAGATGTAT CG



consensusID : consensus_8408#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 699
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGTAGAAATATATCCGATGGTTTCATCTACGTCCGCCAAATCGTCCGTTAAGCTTATAAATGCTGCCTCTTTCGAAGATAATCTGAGGTTTAATTGCATGAAGGTGATTTGTAAATACCCAAAGCTCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAGCTATGGTTCTTGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTACATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGATTCGGCCGATGGTAACGATTCCAAAGGACAGGAAATCAATTCGGAATCGCAAATCTACGATAGCCTAATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAACCACCGCTTCATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAGATAAATACTATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTGAACCAGTGCCATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAATCATAAATTAACCCCAAAATTGGGATCAAA]

[+] EMBL BM606884             [CCGCCCACGCGTCCGCCCACGCGTCCGCCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGTAGAAATATATCCGATGGTTTCATCTACGTCCGCCAAATCGTCCGTTAAGCTTATAAATGCTGCCTCTTTCGAAGATAATCTGAGGTTTAATTGCATGAAGGTGATTTGTAAATACCCAAAGCTCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAGCTATGGTTCTTGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTACATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGATTCGGCCGATGGTAACGATTCCAAAGGACAGGAAATCAATTCGGAATCGCAAATCTACGATAGCCTAATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAACCACCGCTTCATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAGATAAATACTATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTGAACCAGTGCCATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAATCATAAATTAACCCCAAAATTGGGATCAAA]


>consensus_8408#1 CCGCCCACGCGTCCGCCCACGCGTCCGCCGACGTTCGCTTGGCAGAGCGTATTCGGGCAT TCCGAGAGAAGACGGAGTAGAAATATATCCGATGGTTTCATCTACGTCCGCCAAATCGTC CGTTAAGCTTATAAATGCTGCCTCTTTCGAAGATAATCTGAGGTTTAATTGCATGAAGGT GATTTGTAAATACCCAAAGCTCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGAT CGCACAAGAGCTATGGTTCTTGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACT TAACAATTTACATCTGGCCGACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAA CTCAACCGATTCGGCCGATGGTAACGATTCCAAAGGACAGGAAATCAATTCGGAATCGCA AATCTACGATAGCCTAATGAAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAA ATCACACAACCACCGCTTCATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGT GATTATTTAGATAAATACTATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCC GTGTGTACTGAACCAGTGCCATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCG TAAGGATAATCATAAATTAACCCCAAAATTGGGATCAAA



consensusID : consensus_8408#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence
                              [CCGATTCAGTGTCATTCTCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGATGCCGTGCAGCTGCGGAGAAGATACATCGAGAAGGCTAGACTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATAGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATTGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTTTCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAATAGAAATATATCC]

[+] EMBL BM624019             [CCGATTCAGTGTCATTCTCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGATGCCGTGCAGCTGCGGAGAAGATACATCGAGAAGGCTAGACTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATAGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATTGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATTTTCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAATAGAAATATATCC]
[+] EMBL BM630555             [      ccGTGTCATTCTCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAGCGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGATAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTCGACGAAGAAAATGCTGCCGTGCAGCTGCGGAGAAGATACATCGAGAAGGCTAGATTGGATATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGG                                                                                                 ]


>consensus_8408#2 CCGATTCAGTGTCATTCTCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAG CGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGA TAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTC GACGAAGAAAATGATGCCGTGCAGCTGCGGAGAAGATACATCGAGAAGGCTAGACTGGAT ATGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCC AGTGTACAGCCAAGGAACTACCATAGTCCGTGGTAATGAACCATTATACCGAGGGCGACA CCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCAT TGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGAT TGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAA GTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCG TGGTACATTGGAATATTTTCTTAACCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCC GAGAGAAGACGGAATAGAAATATATCC



consensusID : consensus_8408#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence
                              [GGCAAGAATCGGCACGTNGACGAGAAGGCTAGATTGGATATCGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATNNTCTTAACCGANCGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGTAGAAGATATATCCGATGGTTTCATCTACGTACGCCAAATCGTCCGTTGAAGCTTATAAATGCTGCCTCTNTGCGAAGATAAATCTGAGGTCTTAATTGCATGAAGGTGATTTGCTAAATACCCAAAGCTCCTCGCACAGGGTAAGTGCTATACCAGGACTGAAGAAGATCGGGACAAAGAGGCCGTATNGGGTACTTGGCG]

[+] EMBL BX468104             [GGCAAGAATCGGCACGTNGACGAGAAGGCTAGATTGGATATCGGGATAAAGCATTAACATTCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATTTACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCTATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATNNTCTTAACCGANCGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGTAGAAGATATATCCGATGGTTTCATCTACGTACGCCAAATCGTCCGTTGAAGCTTATAAATGCTGCCTCTNTGCGAAGATAAATCTGAGGTCTTAATTGCATGAAGGTGATTTGCTAAATACCCAAAGCTCCTCGCACAGGGTAAGTGCTATACCAGGACTGAAGAAGATCGGGACAAAGAGGCCGTATNGGGTACTTGGCG]


>consensus_8408#3 GGCAAGAATCGGCACGTNGACGAGAAGGCTAGATTGGATATCGGGATAAAGCATTAACAT TCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCACCCAGTGTACAGCCAAGGAACTA CCATCGTCCGTGGTAATGAACCATTATACCGAGGGCGACACCATTACTGGGAGCTGAAAA TTCTTTCACCCCTATCCGGGACAGACATCATGTTTGGCATTGGCACTGATAAGGTGGATT TACTTCGGCATCAGTTTTCATTCACCAGTGTGCTAGGGATCGACGACCAATCGTGGGGCT ATTCCTATCGCGGGTTGGCACAGCACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCA GCCGTGGCCGCATCATTGGTATCTACGTGGACATGTTTCGTGGTACATTGGAATATNNTC TTAACCGANCGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGTAGAA GATATATCCGATGGTTTCATCTACGTACGCCAAATCGTCCGTTGAAGCTTATAAATGCTG CCTCTNTGCGAAGATAAATCTGAGGTCTTAATTGCATGAAGGTGATTTGCTAAATACCCA AAGCTCCTCGCACAGGGTAAGTGCTATACCAGGACTGAAGAAGATCGGGACAAAGAGGCC GTATNGGGTACTTGGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8408#2      CCGATTCAGTGTCATTCTCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAG 60
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      --AGATCGCCNCGA--CNCCAGCGGTAGCATCAGCGGACGAGTACAATGGAAGTGGCCAG 56
consensus_8408#1      -------------------------------------CCGCCCACGCGTCCGCCCACGCG 23
                                                                                  

consensus_8408#2      CGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGA 120
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      CGAAATGAACGTTGCTCAACGAAGCAAAAATGCCAATTTCCTACGAACGAGCTGCACCGA 116
consensus_8408#1      TCCGCCGACGTTCGCTTGGCAGAGCGTATTCGGGCATTCCGAGAGAAGACGGAGTAGAAA 83
                                                                                  

consensus_8408#2      TAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTC 180
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      TAACTGGTCGGTCCCGTTCTGCAACTGCGAGTATCCCAATGAAACCCGATGGAAACATTC 176
consensus_8408#1      TATATCCGATGGTTTCATCTACGTCCGCCAAATCGTCCGTTAAGCTT-ATAAATGCTGCC 142
                                                                                  

consensus_8408#2      GACGAAGAAAATGATGCCGTGCAGCTGCGGA-GAAGATACATCGAGAAGGCTAGACTGGA 239
consensus_8408#3      -------------------GGCAAGAATCGG-CACGTNGA--CGAGAAGGCTAGATTGGA 38
consensus_8408#0      GACGAAGAAAATGCTGCCGTGCAGCTGCGGA-GAAGATACATCGAGAAGGCTAGATTGGA 235
consensus_8408#1      TCTTTCGAAGATAATCTGAGGTTTAATTGCATGAAGGTGATTTGTAAATACCCAA--AGC 200
                                          *            * *       *  **  *   *   * 

consensus_8408#2      TAT-GGGATAAAGCATTAACAT-TCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCA 297
consensus_8408#3      TATCGGGATAAAGCATTAACAT-TCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCA 97
consensus_8408#0      TAT-GGGATAAAGCATTAACAT-TCGAAACGGTGGTATCTGGTGCGGAAGTGATTTTTCA 293
consensus_8408#1      TCCTCGCACAGGTAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAGCTATGGTTCT 260
                      *    * * *    * *   **  *    * *  * *  * *  *   **  **  *** 

consensus_8408#2      CCCAGTGTACAGCCAAGGAACTACCATAGTCCGTGGTAATGAACCATTATACCGAGGGCG 357
consensus_8408#3      CCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCG 157
consensus_8408#0      CCCAGTGTACAGCCAAGGAACTACCATCGTCCGTGGTAATGAACCATTATACCGAGGGCG 353
consensus_8408#1      TGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTACATCTGGCCG 320
                        ** * ** **      * *   **  *  * * * * * *** ***       ** **

consensus_8408#2      AC--ACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTT 415
consensus_8408#3      AC--ACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTT 215
consensus_8408#0      AC--ACCATTACTGGGAGCTGAAAATTCTTTCACCCCTATCCGGGACAGACATCATGTTT 411
consensus_8408#1      ACGAAGCGGTACTGTGTGGTAAAAAG-CTGAAACTCTTCAACTCAACCGATTCGGCCGAT 379
                      **  * *  ***** * * * ****  **   ** * *   *   ** **         *

consensus_8408#2      GGCATTGGCACTGATAAGGTGGAT-TTACTTCGGCATC---AGTTTTCATTCACC----A 467
consensus_8408#3      GGCATTGGCACTGATAAGGTGGAT-TTACTTCGGCATC---AGTTTTCATTCACC----A 267
consensus_8408#0      GGCATTGGCACTGATAAGGTGGAT-TTACTTCGGCATC---AGTTTTCATTCACC----A 463
consensus_8408#1      GGTAACGATTCCAAAGGACAGGAAATCAATTCGGAATCGCAAATCTACGATAGCCTAATG 439
                      ** *  *   *  *      ***  * * ***** ***   * * * *  *  **     

consensus_8408#2      GTGTGCTAGGGA-TTGACGACCAA-TCGTGGGGCTATTCCTATCGCG-GGTTGGCACAGC 524
consensus_8408#3      GTGTGCTAGGGA-TCGACGACCAA-TCGTGGGGCTATTCCTATCGCG-GGTTGGCACAGC 324
consensus_8408#0      GTGTGCTAGGGA-TCGACGACCAA-TCGTGGGGCTATTCCTATCGCG-GGTTGGCACAGC 520
consensus_8408#1      AAGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAACCACCGCTTC 499
                        * ** ***   *  ****  **  *  * *   **    *** *        * *  *

consensus_8408#2      ACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGC----ATCATTGGT 580
consensus_8408#3      ACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGC----ATCATTGGT 380
consensus_8408#0      ACAATGGCCAACTGAAGTATTATGGAAAGAAGTTCAGCCGTGGCCGC----ATCATTGGT 576
consensus_8408#1      ATTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAGATAAATACT 559
                      *      *  * *  * ** *  ***          ** ***         ** * *  *

consensus_8408#2      ATCTACGTGGACA------TGTTTCGTGGTACATTGGAA---TATTTTCTTAACCGAC-- 629
consensus_8408#3      ATCTACGTGGACA------TGTTTCGTGGTACATTGGAA---TATNNTCTTAACCGANC- 430
consensus_8408#0      ATCTACGTGGACA------TGTTTCGTGGTACATTGGAA---TATTTTCTTAACCGAC-- 625
consensus_8408#1      ATTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTGAACCAGTGC 619
                      ** *     * **      ** *     *** * **      * *   ** ****     

consensus_8408#2      -GTTCGCTTGGCAGAGCGTATT----CGGGCATTCCGAGAGAAGACGGAATAGAA-ATAT 683
consensus_8408#3      -GTTCGCTTGGCAGAGCGTATT----CGGGCATTCCGAGAGAAGACGGAGTAGAAGATAT 485
consensus_8408#0      -GTTCGCTTGGCAGAGCGTATT----CGGGCATTCCGAGAGAAGACGGAGTAGAA-ATAT 679
consensus_8408#1      CATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAATCATAAATTA 679
                        * *  **     *   **      * *   ** * *  * *     * *   * **  

consensus_8408#2      ATCC-------------------------------------------------------- 687
consensus_8408#3      ATCCGATGGTTTCATCTACGTACGCCAAATCGTCCGTTGAAGCTTATAAATGCTGCCTCT 545
consensus_8408#0      ATCCGATGGTTTCATCTACGTCCGCCAAATCGTCCGTT-AAGCTTATAA-TGCTGCCTCT 737
consensus_8408#1      ACCCCAAAATTGGGATCAAA---------------------------------------- 699
                      * **                                                        

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      NTGCGAAGATAAATCTGAGGTCTTAATTGCATGAAGGTGATTTGCTAAATACCCAAAGCT 605
consensus_8408#0      TCG----AAGATATCTGAGGTTTCACNTGN-TGAACGCGATTTG-TAAATACCCAAAGCT 791
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      CCTCGCACAGGGTAAGTGCTATACCAGGACTGAAGAAGATCGGGACAAAGAGGCCGTATN 665
consensus_8408#0      CCTCGCACAGG-TAAATGCTATACCAGGGCTGAAGAAGATCGCACAAGAGCTATGGTTCT 850
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      GGGTACTTGGCG------------------------------------------------ 677
consensus_8408#0      TGCAATTTAAAGAGCCTAACCGGACAGAGGACTTCGCACTTAACAATTTACATCTGGCCG 910
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      ACGAAGCGGTACTGTGTGGTAAAAAGCTGAAACTCTTCAACTCAACCGATTCGGCCGATG 970
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      GTAACGATTCTAAAAGACAGGATATCAATTCGGAATCGCAAATCTACGATAGCCCTATGA 1030
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      AGCGCGAGGATCTCAACGAAGAAACCACGAGATCATCAAAATCACACAACCACCGCTTCA 1090
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      TTTCTACTGAGTCTAATAGTGAGGATGATGAGCTGGCTGTGATTATTTAGATAAATACTA 1150
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      TTTTTACTGCCAGTATACTGGTAACCAGTATACTGCGGCCGTGTGTACTGAACCAGTGCC 1210
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      ATCCATTTCAATCATTTTACCACTACAGTTGTTACCATCGTAAGGATAATCATAAATTAA 1270
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      CCCAAAATTGGGATCAAAATGTTGCTGACGAAGTAAGTAATTTTTTTTTATGTTAGCTAT 1330
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      GTTCATTTTTTCCTACTTGTGGATTTTCCTCGAAGTCATAACCTTTTTTTACATCTAAAC 1390
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ------------------------------------------------------------
consensus_8408#3      ------------------------------------------------------------
consensus_8408#0      CTAAGTACTTCATGATATACGGCTAGTGTATGATACGTATCTTAAGTTGGCCTTAAGTAA 1450
consensus_8408#1      ------------------------------------------------------------
                                                                                  

consensus_8408#2      ----------------------------------------------------
consensus_8408#3      ----------------------------------------------------
consensus_8408#0      AAATGGCTCGTTATCTTAAGTTTCGTCTAGCATTTATTTTGCAGATGTATCG 1502
consensus_8408#1      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)