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Anopheles gambiae
cluster # 8441 cluster # 8441       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8441#0 length = 1423 sequences # 2  
consensus_8441#1 length = 1373 sequences # 7  
consensus_8441#2 length = 631 sequences # 1  

consensusID : consensus_8441#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1423
fasta sequence
                              [CAATTACAACGCGAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAACTACAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTTTTCCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCTCGGAAGCACATTAAAGCGGTGCACGCACTACAGAACGGTCTG-GAGCTGGCGCTGAAGACGCTACGAATGATACCACAACACGCAAGCAGAAAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCTCCGTGCTGTCTCTGTCGGCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCGGGTTGTTTGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGCCCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGGTTTCCCGCACGGCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATCACTGCCCCCAGTGCTACAGCAAGTACTGTGAGCTACCGGTGGAATGTTCAGCGTGCGGTTTAGCGTTAGCATCTGCGCCACATTTAGCCCGCAGCTATCATCATCTGTTTCCGGTGCCACATTTAAAAAAACTCCCGCTAGAGCAGGTACAGGTGCAGGAACCGCGCGACCCACCGGTGACAAACTGTACGCCTGCCAGAAAACGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTTGCATTGATTGCGATATTTTCATACACGAAACGCTGCATTCATGTGTAGGGTGTACGACGATTCCGGCATCGGCTCAAACTTTACAGGCACGAAAGCCGGTACCACCACCGCACAGTATGTCTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGCATGCTCGTGCATGTTGTTCAGATGCTTAATTGTAACATTAAAAGTTGTCACTGGAAGAAAA]

[+] EMBL CNS090JL             [CAATTACAACGCGAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAACTACAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTTTTCCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCTCGGAAGCACATTAAAGCGGTGCACGCACTACAGAACGGTCTG GAGCTGGCGCTGAAGACGCTACGAATGATACCACAACACGCAAGCAGAAAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCTCCGTGCTGTCTCTGTCGGCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCGGGTTGTTTGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGCCCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGGTTTCCCGCACGGCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATCACTGCCCCCAGTGCTACAGCAAGTACTGTGAGCTACCGGTGGAATGTTCAGCGTGCGGTTTAGCGTTAGCATCTGCGCCACATTTAGCCCGCAGCTATCATCATCTGT                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS090JM             [                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAAGATTTCCGAACTCGGCGGTACCTCTCGGAAGCACATTAAAGCGG GCACGCACTACAGAACGGTCTGTGA CTGGCGCTGAAGACGCTACGAATGATACCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCTCCGTGCTGTCTCTGTCGGCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCGGGTTGTTTGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGGCCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGGTTTCCCGCACGGCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTTTTTGTGCCACATCGACAGTGCGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATCACTGCCCCCAGTGCTACAGCAAGTACTGTGAGCTACCGGTGGAATGTTCAGCGTGCGGTTTAGCGTTAGCCTCTGCGCCACATTTAGCCCGCAGCTATCATCATCTGTTTCCGGTGCCACATTTAAAAAAACTCCCGCTAGAGCAGGTACAGGTGCAGGAACCGCGCGACCCACCGGTGACAAACTGTACGCCTGCCAGAAAACGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTTGCATTGATTGCGATATTTTCATACACGAAACGCTGCATTCATGTGTAGGGTGTACGACGATTCCGGCATCGGCTCAAACTTTACAGGCACGAAAGCCGGTACCACCACCGCACAGTATGTCTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGCATGCTCGTGCATGTTGTTCAGATGCTTAATTGTAACATTAAAAGTTGTCACTGGAAGAAAA]


>consensus_8441#0 CAATTACAACGCGAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGA AAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTG GGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGA AGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAACTACAAGCAATGAAGCGCGGC TTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATG ACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTT ATCGAGGAGTTTTTTTTCCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCA AAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCTCGGAAGCACATTAAAGCGGTG CACGCACTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATACCACAACAC GCAAGCAGAAAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTC CATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCTCCGTGCTGTCTCTGTCG GCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCGGGTTGTTTGGTGCCGTG CTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGCCCGGC AATCAGCAGGAATTTTCGTTGATTAAGATGGGTTTCCCGCACGGCAAAACGGAATCGGGC AAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGAGCCGGCCAAA CTGACCTCGGGCGGTTATCACTGCCCCCAGTGCTACAGCAAGTACTGTGAGCTACCGGTG GAATGTTCAGCGTGCGGTTTAGCGTTAGCATCTGCGCCACATTTAGCCCGCAGCTATCAT CATCTGTTTCCGGTGCCACATTTAAAAAAACTCCCGCTAGAGCAGGTACAGGTGCAGGAA CCGCGCGACCCACCGGTGACAAACTGTACGCCTGCCAGAAAACGCTCGCAAGTGGCACGG ATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTTGCATTGATTGCGATATTT TCATACACGAAACGCTGCATTCATGTGTAGGGTGTACGACGATTCCGGCATCGGCTCAAA CTTTACAGGCACGAAAGCCGGTACCACCACCGCACAGTATGTCTATCATATAAAGCTGTT GAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGCATGCTCGTGCATGTTGTT CAGATGCTTAATTGTAACATTAAAAGTTGTCACTGGAAGAAAA



consensusID : consensus_8441#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1373
fasta sequence
                              [GCAGATCGGCACGANGGACCGGCTGCTGTTTCAATTACACACGCGAAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTCGACCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCCCGGAAGCACATTAA-AGCGGTGCACGC-ACTAACCAATGGCGTACCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATTCCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCG--AAAATCTT-AAAACGG--AAGGC-G-TT-CGATGCTCC-GTGCTGTC-TC-TGTC-GGC-GGAAATCC-GTATC-TGC-AAGTTCCTGT-GCAC-CG-AAACGGGC-GGGTT--GTT-TGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGCGCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGTTTTCCCGCACGGCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATAACTGCCCCCAGTGCTACAGCAAGTACTGTGAGCTACCGGTGGAATGTTCAGCGCGACCCACCGGTGACAAACTGTTACGCCTGCCAGAAAACGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTTGCATTGATTGCGATATTTTTATACACGAAACGCTGCATTAATGTGTAGGGTGTACGACGATTCCGGCATCGGCTCAAACTTTAAAGGCACGAAAGCCGGTACCACCACCGCACAGTATGTCTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGCATGCTCGTGCATGTTGTTAAGATGCTTAATTTTAACATTAAAAGTTGTCACTG]

[+] EMBL BX468413             [GCAGATCGGCACGANGGACCGGCTGCTGTTTCAATTACACACGCGAAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTCGACCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCCCGGAAGCACATTAACAGCGGTGCACGCGACTAACCAATGGCGTACCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATTCCACAACACGCAAGCAGAGAAA TTTAGTTATTATGGGAACGTTGACCAGCTGCGATCCGAACGATGT CATCTGACGATCGNAAAAATCTTAAAAACGGGAAAGGCGG TTACGATGCTCCGGAGCTGTCATCATGTCAGGCGGGAAATCCGGTATCTTGCAAAGTTCCTGTGGCACACGAAAACGGGCACGGTTCGGTTAGGGTGCgn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09RGZ             [                                              aaTGTTTTTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAA CTTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGATGAGTTTTTCGACCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCTCGGAAGCACATTAA AGCGGTGCACGC ACTAACCAATGGCGTACCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATACCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCG  AAAATCTT AAAACGG  AAGGC G TT CGATGCTCC GTGCTGTC TC TGTC GGC GGAAATCC GTATC TGC AAGTTCCTGT GCAC CG AAACGGGC GGGTT  GTT TGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGCGCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGTTTTCCCGCACGGCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGAGCCGGCC                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM608015             [                                                    ccgGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTCGACCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCCCGGAAGCACATTAA AGCGGTGCACGC ACTAACCAATGGCGTACCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATTCCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCG  AAAATCTT AAAACGG  AAGGC G TT CGATGCTCC GTGCTGTC TC TGTC GGC GGAAATCC GTATC TGC AAGTTCCTGT GCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX627489             [                                                          ATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAATACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTATTTATCGAGGAGTTTTTCGACCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCCCGGAAGCACATTAA AGCGGTGCACGC ACTAACCAATGGCGTACCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATTCCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCG  AAAATCTT AAAACGG  AAGGC GTTT CGATGCTCC GTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS098VV             [                                                                                 ATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGACAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM649220             [                                                                                                                        ccgGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTCGACCAGAATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACTCGGCGGTACCTCCCGGAAGCACATTAA AGCGGTGCACGC ACTAACCAATGGCGTACCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGATTCCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATGTCCATCTGACGATCG  AAAATCTT AAAACGG  AAGGC G TT CGATGCTCC GTGCTGTC TC TGTC GGC GGAAATCC GTATC TGC AAGTTCCTGT GCAC CG AAACGGGCGGGGTT  GTT TGGTGCCGTGCTGGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09RH0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCGGTGAACCATCGCTAAAGAACGGTCTGGGGGTGGCGCTGAAGACGCTACGAATGATACCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCCGAACGATTTCCATCTGACGATCG  AAAATCTT AAAACGG  AAGGC G TT CGATGCTCC GTGCTGTT TC TGTC GGC GGAAATCC GTATC TGC AAGTTCCTGT GCAC CG AAACGGGC GGGTT  GTT TGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACCGCAGGCCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGGTTTCCCGCACGGCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATAACTGCCCCCAGTGCTACAGCAAGTACTGTGAGCTACCGGTGGAATGTTCAGCGCGACCCACCGGTGACAAACTGTTACGCCTGCCAGAAAACGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTTGCATTGATTGCGATATTTTTATACACGAAACGCTGCATTAATGTGTAGGGTGTACGACGATTCCGGCATCGGCTCAAACTTTAAAGGCACGAAAGCCGGTACCACCACCGCACAGTATGTCTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGCATGCTCGTGCATGTTGTTAAGATGCTTAATTTTAACATTAAAAGTTGTCACTG]


>consensus_8441#1 GCAGATCGGCACGANGGACCGGCTGCTGTTTCAATTACACACGCGAAGTGTTTGTGAAAT TAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAAT GGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGA AGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAA GGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCA CCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCG CTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTCGACCAGAATCC CATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCCGAACT CGGCGGTACCTCCCGGAAGCACATTAAAGCGGTGCACGCACTAACCAATGGCGTACCGCT GGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGAATGAT TCCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGCGATCC GAACGATGTCCATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCTCCGTGCT GTCTCTGTCGGCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCGGGTTGTT TGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCGATCCACC GCAGCGCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGTTTTCCCGCACGGCAAAAC GGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTGCGGATGA GCCGGCCAAACTGACCTCGGGCGGTTATAACTGCCCCCAGTGCTACAGCAAGTACTGTGA GCTACCGGTGGAATGTTCAGCGCGACCCACCGGTGACAAACTGTTACGCCTGCCAGAAAA CGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTT GCATTGATTGCGATATTTTTATACACGAAACGCTGCATTAATGTGTAGGGTGTACGACGA TTCCGGCATCGGCTCAAACTTTAAAGGCACGAAAGCCGGTACCACCACCGCACAGTATGT CTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGC ATGCTCGTGCATGTTGTTAAGATGCTTAATTTTAACATTAAAAGTTGTCACTG



consensusID : consensus_8441#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence
                              [CCGAATTACAACGCGAAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGTAAGTTCCGAGCATCCTGTTGTTTTCAAGAATCTTCCGTCGTAGGAAATTCTAAACAATGATCTGTGGACCTCATTGCCCTCCTGTGAAGGATATTTTGTCGATCAATTTACGTTGATTAAAGTCTTCAATTCAATAGCGGATCCAATTGGCCCTGAATTTTGAACATTGCAACCTTCCGGGAGCTGGCTTAGCGGCAATCAGGCAAACCGGTTGCAATTCTACCCATCGCTGTAGCAAGCATAACAAACATGGTACAAATGATATTTTCTTTCTTACTATTCCAACAGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTT]

[+] EMBL BM642811             [CCGAATTACAACGCGAAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGTAAGTTCCGAGCATCCTGTTGTTTTCAAGAATCTTCCGTCGTAGGAAATTCTAAACAATGATCTGTGGACCTCATTGCCCTCCTGTGAAGGATATTTTGTCGATCAATTTACGTTGATTAAAGTCTTCAATTCAATAGCGGATCCAATTGGCCCTGAATTTTGAACATTGCAACCTTCCGGGAGCTGGCTTAGCGGCAATCAGGCAAACCGGTTGCAATTCTACCCATCGCTGTAGCAAGCATAACAAACATGGTACAAATGATATTTTCTTTCTTACTATTCCAACAGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCAACGCGCTTCATCTGTT]


>consensus_8441#2 CCGAATTACAACGCGAAGTGTTTGTGAAATTAGTGTAAAAATCTGGGTTTGATCGTTGCA GGAAAAGTAAACCTACTGATCAAACACAATGGCGGACGAAGAGGATCCAAAGGAATATCG CTGGGAGACGGGATACGAGAAAACATGGTAAGTTCCGAGCATCCTGTTGTTTTCAAGAAT CTTCCGTCGTAGGAAATTCTAAACAATGATCTGTGGACCTCATTGCCCTCCTGTGAAGGA TATTTTGTCGATCAATTTACGTTGATTAAAGTCTTCAATTCAATAGCGGATCCAATTGGC CCTGAATTTTGAACATTGCAACCTTCCGGGAGCTGGCTTAGCGGCAATCAGGCAAACCGG TTGCAATTCTACCCATCGCTGTAGCAAGCATAACAAACATGGTACAAATGATATTTTCTT TCTTACTATTCCAACAGGGAAGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCG GTTAGTGATATCATCCAAAAGGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGC AAGCTCGGCATGATGCGCCACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTT CCGGATCTGAAACCAACGCGCTTCATCTGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8441#0      -------------------------------CAATTACA-ACGCGA-GTGTTTGTGAAAT 27
consensus_8441#1      GCAGATCGGCACGANGGACCGGCTGCTGTTTCAATTACACACGCGAAGTGTTTGTGAAAT 60
consensus_8441#2      -----------------------------CCGAATTACA-ACGCGAAGTGTTTGTGAAAT 30
                                                      ******* ****** *************

consensus_8441#0      TAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAAT 87
consensus_8441#1      TAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAAT 120
consensus_8441#2      TAGTGTAAAAATCTGGGTTTGATCGTTGCAGGAAAAGTAAACCTACTGATCAAACACAAT 90
                      ************************************************************

consensus_8441#0      GGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGA 147
consensus_8441#1      GGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGGA 180
consensus_8441#2      GGCGGACGAAGAGGATCCAAAGGAATATCGCTGGGAGACGGGATACGAGAAAACATGGTA 150
                      ********************************************************** *

consensus_8441#0      AGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAA 207
consensus_8441#1      AGCAATCAAAGAGGACGACGATGGGCTTATCGAAGGATCGGTTAGTGATATCATCCAAAA 240
consensus_8441#2      AGTTCC----GAGCATCCTGTTG----TTTTCAAGAATC------TTCCGTCGTAGGAAA 196
                      **        *** *    * **    * *  *** ***      *    ** *   ***

consensus_8441#0      GGCTAAGCGCAACTA-CAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCC- 265
consensus_8441#1      GGCTAAGCGCAAGCGTCAAGCAATGAAGCGCGGCTTCAGCAAGCTCGGCATGATGCGCC- 299
consensus_8441#2      TTCTAAAC------AATGATCTGTGGACCTCATTGCCCTCCTGTGAAGGATATTTTGTCG 250
                        **** *          * *  ** * * *     *  *  *    * **  *  * * 

consensus_8441#0      ACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCC----GGATCTGAAACCA 321
consensus_8441#1      ACCTGTACGTGTTGCTCGACTGCTCCGAAGCGATGACGGTTCC----GGATCTGAAACCA 355
consensus_8441#2      ATCAATTTACGTTGATTAAAGTCTTCAATTCAATAGCGGATCCAATTGGCCCTGAATTTT 310
                      * *  *    **** *  *   ** * *  * **  *** ***    **  *****    

consensus_8441#0      ACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTTTTCCAG 381
consensus_8441#1      ACGCGCTTCATCTGTTCTCTTAAACTGCTAGAACTGTTTATCGAGGAGTTTTTCGACCAG 415
consensus_8441#2      GAACATTGCAACC--TTCCGGGAGCTGGCTTAGC-GGCAATCAGGCAAA---CCGGTTGC 364
                         *  * ** *   *  *   * ***    * * *   ***  * *             

consensus_8441#0      AATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCC 441
consensus_8441#1      AATCCCATCTCCCAGCTTGGCGTAATTGCAATGAAGGCAAAGCGCGCGGAAAAGATTTCC 475
consensus_8441#2      AATTCTACCCATCGCTGTAGC--AAGCATAACAAACATG----GTACAAATGATATTTTC 418
                      *** * * *   *    * **  **    **  **        *  *  *  * **** *

consensus_8441#0      GAACTCGGCGGTACCTCTCGGAAGCACATTAAAGCGGTGCACGCACTA------------ 489
consensus_8441#1      GAACTCGGCGGTACCTCCCGGAAGCACATTAAAGCGGTGCACGCACTAACCAATGGCGTA 535
consensus_8441#2      TTTCTTACTATTCCAACAGGGAAGCA-ATCAAAGAGGACGACG-ATGGGCTTATCG---- 472
                         **      * *  *  ******* ** **** **   *** *               

consensus_8441#0      ------------------------CAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGA 525
consensus_8441#1      CCGCTGGTCGGTGAACCATCGCTACAGAACGGTCTGGAGCTGGCGCTGAAGACGCTACGA 595
consensus_8441#2      ------------------------AAGGATCGGTTAGTGATATCATCCAAAAGGCTAAG- 507
                                               ** *  *  * * * *  *    ** * **** * 

consensus_8441#0      ATGATACCACAACACGCAAGCAGAAAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGC 585
consensus_8441#1      ATGATTCCACAACACGCAAGCAGAGAAATTTTAGTTATTATGGGAAGTTTGACCAGCTGC 655
consensus_8441#2      -------CGCAAGCGTCAAGCAATGAAGC----GCGGCTTCAGCAAGCTCGGCATGATGC 556
                             * ***    ******   **      *    *   * *** * * *  * ***

consensus_8441#0      G--ATCCGAACGATGTCCATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCT 643
consensus_8441#1      G--ATCCGAACGATGTCCATCTGACGATCGAAAATCTTAAAACGGAAGGCGTTCGATGCT 713
consensus_8441#2      GCCACCTGTACG-TGTTGCTCGACTGCTCCGAAGCGATGACGGTTCCGGATCTGAAACCA 615
                      *  * * * *** ***   **    * **  **    * *       **   *  *  * 

consensus_8441#0      CCGTGCTGTCTCTGTCGGCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCG 703
consensus_8441#1      CCGTGCTGTCTCTGTCGGCGGAAATCCGTATCTGCAAGTTCCTGTGCACCGAAACGGGCG 773
consensus_8441#2      ACGCGCTTCATCTGTT-------------------------------------------- 631
                       ** ***   *****                                             

consensus_8441#0      GGTTGTTTGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCG 763
consensus_8441#1      GGTTGTTTGGTGCCGTGCTGGACGATGCGCACTACAAGGATCAGCTGCTTCAGCACATCG 833
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      ATCCACCGCAGCCCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGGTTTCCCGCACG 823
consensus_8441#1      ATCCACCGCAGCGCGGCAATCAGCAGGAATTTTCGTTGATTAAGATGGTTTTCCCGCACG 893
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      GCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTG 883
consensus_8441#1      GCAAAACGGAATCGGGCAAGGAACCACCGTTGACGATGTGTATGTGCCACATCGACAGTG 953
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      CGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATCACTGCCCCCAGTGCTACAGCAAGT 943
consensus_8441#1      CGGATGAGCCGGCCAAACTGACCTCGGGCGGTTATAACTGCCCCCAGTGCTACAGCAAGT 1013
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      ACTGTGAGCTACCGGTGGAATGTTCAGCGTGCGGTTTAGCGTTAGCATCTGCGCCACATT 1003
consensus_8441#1      ACTGTGAGCTACCGGTGGAATGTTCAGCG------------------------------- 1042
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      TAGCCCGCAGCTATCATCATCTGTTTCCGGTGCCACATTTAAAAAAACTCCCGCTAGAGC 1063
consensus_8441#1      ------------------------------------------------------------
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      AGGTACAGGTGCAGGAACCGCGCGACCCACCGGTGACAAACTGT-ACGCCTGCCAGAAAA 1122
consensus_8441#1      ----------------------CGACCCACCGGTGACAAACTGTTACGCCTGCCAGAAAA 1080
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      CGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTT 1182
consensus_8441#1      CGCTCGCAAGTGGCACGGATAAAATGGTGTACGAGTGCGACGCCTGCAAGCAAGTGTTTT 1140
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      GCATTGATTGCGATATTTTCATACACGAAACGCTGCATTCATGTGTAGGGTGTACGACGA 1242
consensus_8441#1      GCATTGATTGCGATATTTTTATACACGAAACGCTGCATTAATGTGTAGGGTGTACGACGA 1200
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      TTCCGGCATCGGCTCAAACTTTACAGGCACGAAAGCCGGTACCACCACCGCACAGTATGT 1302
consensus_8441#1      TTCCGGCATCGGCTCAAACTTTAAAGGCACGAAAGCCGGTACCACCACCGCACAGTATGT 1260
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      CTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGC 1362
consensus_8441#1      CTATCATATAAAGCTGTTGAAGCTACGGTATAAACAATGATGCATTTGTTTAAATCCGGC 1320
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      ATGCTCGTGCATGTTGTTCAGATGCTTAATTGTAACATTAAAAGTTGTCACTGGAAGAAA 1422
consensus_8441#1      ATGCTCGTGCATGTTGTTAAGATGCTTAATTTTAACATTAAAAGTTGTCACTG------- 1373
consensus_8441#2      ------------------------------------------------------------
                                                                                  

consensus_8441#0      A 1423
consensus_8441#1      -
consensus_8441#2      -
                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)