These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8444#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1682 fasta sequence [CCCACGGAACGCGCGTATCGTCATTCTCAGGGTCGCAACAACTCCCATCCGTGGGTTCGTGATTCGCATTAATAAGTGGCTGTGATCTTGT-GACGTGTCTTGTTTTTTTTCCGCACGATCTAGTAAAACCGATCGCGTGTGGGGCATTTAAGTGATTCACATTCACCTGCAGTGAGGTTTTGGGACGTTCCCTGTGCTGCTGCTTTCCTATCGACAGTAAACTTTTCTCTCCTATCAGCAATGTCGTGGTATTATGTGCCCAAGCCCACCGTAGTTCCGGCGGAAAACTTCAACCCATCGGAGGATGCTGCCGCCCTTCGCAAAGCGATGAAGGGCTTCGGTACGGACGAGCAGATAGAGGCCGCCTTTAAGAACGAGCTGGGCCGCGACCTCGTGAAGGACCTGAAGTCCGAGCTGAGCGGCAAATTTGAGGACGTCATCGTAGGTCTGATGACACCGCCGGTCAACTACCTGTGCAAGCAGCTGTACAAAGCGATGGACGGCATCGGGACGGACGAGAAGGCGCTGATCGAGATACTGTGCTCGCAGGACAACGATCAGATGCACGAGACGAGGCCAAGCTCGGCACGGATGAGTCGGTGTTTTACAAGATTCTGGCCCACGCATCCTTCTCCCAGCTGGAGCTGGTGTTCGAGGAGTACAAGAAGCTTACCGGGCGTACGATCGAGCAGGCACT-AAAGGCGGAGATCAGCGGCGATTTCTACGACGCCCTCAGCGCGATCGTCGAGTGTGTTCAGATGGCACCGCACTTCTTTGCCAAGAAGCTGTTCAAAGCAATGGACGGTCTCGGCACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATCGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTCGAATGGAACAACAACGCATAATCATAATCGTTATCTCTATTTTAATGTTTCATGTTGAG-CCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGACTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAACCAGAACAGAGCGAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCACATACATTCTTTCTTACATGA-CAATG-AAAAGCGTATTATAATGTGTAGGTATTGTAAAACTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTCTGAATTCAGTGGTTGAAGAACTTCGATGATATGCCAACTATTAAATTTGTGCTTTTTTGTTGGCACGTTTTTCCATACGAAAAATTATGGAAATGTTTCCAGATATTTTCACGTATTGATCGAAAATTGGGCTTTCCATACGTTTCCACGCGTGCTTTTTAGTTGAATTGACGGCGAACTATCGAACCATCACCTCAAGCGCATTTCAACTGAAAAGCGTTCAACTATTCAATTCTGACTGTGTTTAATTTAAGCTTTTTAGTTGGCTCGTTTCTTTACTAAAAATTCCTGATTTTATTCTCAGAAGTTCAGGATAATTTTCTGATTTT] [+] EMBL CNS08W9P [CCCACGGAACGCGCGTATCGTCATTCTCAGGGTCGCAACAACTCCCATCCGTGGGTTCGTGATTCGCATTAATAAGTGGCTGTGATCTTGT GACGTGTCTTGTTTTTTTTCCGCACGATCTAGTAAAACCGATCGCGTGTGGGGCATTTAAGTGATTCACATTCACCTGCAGTGAGGTTTTGGGACGTTCCCTGTGCTGCTGCTTTCCTATCGACAGTAAACTTTTCTCTCCTATCAGCAATGTCGTGGTATTATGTGCCCAAGCCCACCGTAGTTCCGGCGGAAAACTTCAACCCATCGGAGGATGCTGCCGCCCTTCGCAAAGCGATGAAGGGCTTCGGTACGGACGAGCAGATAGAGGCCGCCTTTAAGAACGAGCTGGGCCGCGACCTCGTGAAGGACCTGAAGTCCGAGCTGAGCGGCAAATTTGAGGACGTCATCGTAGGTCTGATGACACCGCCGGTCAACTACCTGTGCAAGCAGCTGTACAAAGCGATGGACGGCATCGGGACGGACGAGAAGGCGCTGATCGAGATACTGTGCTCGCAGGACAACGATCAGATGCACGAGACGAGGCCAAGCTCGGCACGGATGAGTCGGTGTTTTACAAGATTCTGGCCCACGCATCCTTCTCCCAGCTGGAGCTGGTGTTCGAGGAGTAC ATTTTTTTACCGGGCGTACGATCGAGCAGGCACT AAAGGCGGAGATCAGCGGCGATTTCTACGACGCCCTCAGCGCGATCGTCGAGTGTGTTCAGATGGCACCGCACTTCTTTGCCAAGAAGCTGTTCAAAGCAATGGACGGTCTCGGCACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATCGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATA ] [+] EMBL CNS08WDU [ TCGC ACAACTCCCATCCGTGGGTTCGTGATTCGCATTAATAAGTGGCTGTGATCTTGTGGACGTGTCTTGTTTTTTTTCCGCACGATCTAGTAAAACCGATCGCGTGTGGGGCATTTAAGTGATTCACATTCACCTGCAGTGAGGTTTTGGGACGTTCCCTGTGCTGCTGCTTTCCTATCGACAGTAAACTTTTCTCTCCTATCAGCAATGTCGTGGTATTATGTGCCCAAGCCCACCGTAGTTCCGGCGGAAAACTTCAACCCATCGGAGGATGCTGCCGCCCTTCGCAAAGCGATGAAGGGCTTCGGTACGGACGAGCAGATAGAGGCCGCCTTTAAGAACGAGCTGGGCCGCGACCTCGTGAAGGACCTGAAGTCCGAGCTGAGCGGCAAATTTGAGGACGTCATCGTAGGTCTGATGACACCGCCGGTCAACTACCTGTGCAAGCAGCTGTACAAAGCGATGGACGGCATCGGGACGGACGAGAAGGCGCTGATCGAGATACTGTGCTCGCAGGACAACGATCAGATGCACGAGACGAGGCCAAGCTCGGCACGGATGAGTCGGTGTTTTACAAGATTCTGGCCCACGCATCCTTCTCCCAGCTGGAGCTGGTGTTCGAGGAGTACAAGAAGCTTACCGGGCGTACGATCGAGCAGGCACT AAAGGCGGAGATCAGCGGCGATTTCTACGACGCCCTCAGCGCGATCGTCGAGTGTGTTCAGATGAAAACGCACTTCTTTGCCAAGAAGCTGTTCAAAGCAATGGACGGTCTCGGCACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATCGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTG ] [-] EMBL CNS08WDV [ GGACCTGAAGTCCGAGCTGAGCGGCAAATTTGAGGACGTCATCGTAGGTCTGATGACACCGCCGGTCAACTACCTGTGCAAGCAGCTGTACAAAGCGATGGACGGCATCGGGACGGACGAGAAGGCGCTGATCGAGATACTGTGCTCGCAGGACAACGATCAGATGCACGAGACGAGGCCAAGCTCGGCACGGATGAGTCGGTGTTTTTTAAGATTCTGGCCCACGCATCCTTCTCCCAGCTGGAGCTGGTGTTCGAGGAGTACAAGAAGCTTACCGGGCGTACGATCGAGCAGGCACT AAAGGCGGAGATCAGCGGCGATTTCTACGACGCCCTCAGCGCGATCGTCGAGTGTGTTCAGATGGCACCGCACTTCTTTGCCAAGAAGCTGTTCAAAGCAATGGACGGTCTCGGCACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATCGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTCGAATGGAACAACAACGCATAATCGTAATCGTTATCTCTATTTTAATGTTTCATGTTGAGCCCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGACTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAACCAGAACAGAGCGAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCACATACATTCTTTCTTACATGACCAATGAAAAATCGTATTATAATGTGTAGGTATTGTAAAACTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTC ] [-] EMBL CNS08W9Q [ TTTGAGGACGTCATCGTAGGTCTGATGACACCGCCGGTCAACTACCTGTGCAAGCAGCTGTACAAAGCGATGGACGGCATCGGGACGGACGAGAAGGCGCTGATCGAGATACTGTGCTCGCAGGACAACGATCAGATGCACGAGACGAGGCCAAGCTCGGCACGGATGAGTCGGTGTTTTACAAGATTCTGGCCCACGCATCCTTCTCCCAGCTGGAGCTGGTGTTCGAGGAGTACAAGAAGCTTACCGGGCGTACGATCGAGCAGGCACTAAAAAACGGAGATCAGCGGCGATTTCTACGACGCCCTCAGCGCGATCGTCGAGTGTGTTCAGATGGCACCGCACTTCTTTGCCAAGAAGCTGTTCAAAGCAATGGACGGTCTCGGCACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATCGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTCGAATGGAACAACAACGCATAATCGTAATCGTTATCTCTATTTTAATGTTTCATGTTGAG CCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGACTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAACCAGAACAGAGCGAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCACATACATTCTTTCTTACATGA CAATG AAAATCGTATTATAATGTGTAGGTATTGTAAAACTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTCTGAATTCAGTGGTTGAAGAACT ] [+] EMBL AGA285017 [ GCCAAGCTCGGCACGGATGAGTCGGTGTTTTACAAGATTCTGGCCCACGCATCCTTCTCCCAGCTGGAGCTGGTGTTCGAGGAGTACAAGAAGCTTACCGGGCGTACGATCGAGCAGGCACT GAAGGCGGAGATCAGCGGCGATTTCTACGACGCCCTTAGCGCGATCGTCGAGTGTGTCCAGATGGCACCCCACTTCTTTGCTAAAAAGCTGTTCAAAGCAATGGACGGTCTCGGTACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATAGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTC ] [+] EMBL BX627311 [ CGAGGAGTACAAGAAGCTTACCGGGCGTACGATCGAGCAGGCACT GAAGGCGGAGATCAGCGGCGATTTCTACGACGCCCTTAGCGCGATCGTCGAGTGTGTCCAGATGGCACCCCACTTCTTTGCTAAAAAGCTGTTCAAAGCAATGGACGGTCTCGGTACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATAGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTCGAACGGAACAACAACGCATAATCATAATCGTTATCTCTATTTTAATGTTTCATGTTGAG CCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCT AGTAGTGACTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAACCAGAACAGAGCGAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCACATACATTCTTTCTTACATGA CAATG AAAAGCGTATTATAATGTGTAGGTATT ] [+] EMBL BM634558 [ ccgGCACTTCTTTGCCAAGAAGCTGTTCAAAGCAATGGACGGTCTCGGCACGGACGACAAAACGCTGATCCGCATCATCGTCACCCGGGCGGAGATCGATCTGCAGAACATTAAGGACGAGTTCGAGCAAATGTACAACAAGACGCTGCTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTCGAATGGAACAACAACGCATAATCGTAATCGTTATCTCTATTTTAATGTTTCATGTTGAG CCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGACTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAACCAGAACAGAGCGAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCACATACATTCTTTCTTACATGA CAATG AAAATCGTATTATAATGTGTAGGTATTGTAAAACTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTCTGAATTCAGTGGTTGAAGAACTTCGGTGATATGCCAACTAT ] [+] EMBL CNS094PG [ ttTCAGTGCGGTTAAGAGCGAAACATCCGGCGACTACAAGCGTGTGCTGTGTGCGCTGATTGGAGGTGCATAATCAAACCTCGAACGGAACAACAACGCATAATCATAATCGTTATCTCTATTTTAATGTTTCATGTTGAG CCATTTTAATCTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGGCTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAAACAAAACAGAGCAAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCATATACATTCTTTCTTACATGA CAATG AAAAGCGTATTATAATGTGTAGGTATTGTAAAACTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTCTGACCTTTTTGGTTGAAGA ] [-] EMBL AGA283728 [ TGATTGGAGGTGCATAATCAAACCTCGAACGGAACAACAACGCATAATCATAATCGTTATCTCTATTTTAATGTTTCATGTTGAG CCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGACTTTACGAAGCGCATCCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAACCAGAACAGAGCGAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAATACACACACTCACATACATTCTTTCTTACATGA CAATG AAAAGCGTATTATAATGTGTAGGTATTGTAAAACTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTCTGACCTCACTGGTCCAGGAAaaaaaa ] [+] EMBL BM575472 [ cCGCATAATCATAATCGTTATCTCTATTTTAATGTTTCATGTTGAG CCATTTTAATGTTAGCGTAAGTTTACACCAGAATCCTCAGTAGTGGCTTTACGAAGCGCATTCAATCTATTTTGACTACTTTTACAATGCTTTGCAAAACCAGAAACAGAACAGAGCAAAGAACGATCACCATACAGATGATCATGGAATAGGAACACTTAAGTGCCAATGTATTATTTTACGATAAT ACACACTCACATACATTCTTTCTTACATGA CAATG AAAAGCGTATTATAATGTGTAGGTTTTGTAAACCTTGAACTCACTAATTGAACTTTAATTGTCTGACAAATACAGTCTAGATTCAGTGGTTGAAGAACTTCGATGATATGCCAACTATTAAATTTGTGCTTTTTTGTTGGCACGTTTTTCCATACGAAAAATTATGGAAATGTTTCCAGATATTTTCACGTATTGATCGAAAATTGGGCTTTCCATACGTTTCCACGCGTGCTTTTTAGTTGAATTGACGGCGAACTATCGAACCATCACCTCAAGCGCATTTCAACTGAAAAGCGTTCAACTATTCAATTCTGACTGTGTTTAATTTAAGCTTTTTAGTTGGCTCGTTTCTTTACTAAAAATTCCTGATTTTATTCTCAGAAGTTCAGGATAATTTTCTGATTTT] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||