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Anopheles gambiae
cluster # 8451 cluster # 8451       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8451#0 length = 797 sequences # 1  
consensus_8451#1 length = 760 sequences # 3  
consensus_8451#2 length = 722 sequences # 4  
consensus_8451#3 length = 549 sequences # 1  
consensus_8451#4 length = 436 sequences # 1  

consensusID : consensus_8451#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 797
fasta sequence
                              [GCAAGAATCCGCGCACGAGTGCTGAAGTAGTGTATCGATCCTACTAGCCACCTGACCACCGGTTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTTGCGCAAAGAGCATGCCGATGCGCACAAGCGGACGGGGCGGTGGAACCTTAAAACTGCCCCAAGGGACAACGGTGGCGGGTGGCGAAAAGCGAAGGGATTCGGCCACTTTTTTCGGCTGTACNGAGAAAGGATTGGCCCAGGAAGCAATGCGCGGCATTCGGGGGCGGGAACAGGAANGCCGGGCCCCGGNTTAGCCTTTTGAAGGCAACCTTCGGGTTAAAGTNCGAGGGAGGGANTTAGGCCAGGAGCCATGTTTGANGGATTTTTCAGAATGCATGCCAATTTTATGGTTCC]

[+] EMBL BX468242             [GCAAGAATCCGCGCACGAGTGCTGAAGTAGTGTATCGATCCTACTAGCCACCTGACCACCGGTTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTTGCGCAAAGAGCATGCCGATGCGCACAAGCGGACGGGGCGGTGGAACCTTAAAACTGCCCCAAGGGACAACGGTGGCGGGTGGCGAAAAGCGAAGGGATTCGGCCACTTTTTTCGGCTGTACNGAGAAAGGATTGGCCCAGGAAGCAATGCGCGGCATTCGGGGGCGGGAACAGGAANGCCGGGCCCCGGNTTAGCCTTTTGAAGGCAACCTTCGGGTTAAAGTNCGAGGGAGGGANTTAGGCCAGGAGCCATGTTTGANGGATTTTTCAGAATGCATGCCAATTTTATGGTTCC]


>consensus_8451#0 GCAAGAATCCGCGCACGAGTGCTGAAGTAGTGTATCGATCCTACTAGCCACCTGACCACC GGTTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATT CCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAA GCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCC GCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCAC GCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCC GCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGTTCTACCCGGTGCTG AGCCATCTGCCCGCGACGCCCCAGGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACA CTTCGCCCTGTACGCCAAGATTTGCGCAAAGAGCATGCCGATGCGCACAAGCGGACGGGG CGGTGGAACCTTAAAACTGCCCCAAGGGACAACGGTGGCGGGTGGCGAAAAGCGAAGGGA TTCGGCCACTTTTTTCGGCTGTACNGAGAAAGGATTGGCCCAGGAAGCAATGCGCGGCAT TCGGGGGCGGGAACAGGAANGCCGGGCCCCGGNTTAGCCTTTTGAAGGCAACCTTCGGGT TAAAGTNCGAGGGAGGGANTTAGGCCAGGAGCCATGTTTGANGGATTTTTCAGAATGCAT GCCAATTTTATGGTTCC



consensusID : consensus_8451#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 760
fasta sequence
                              [CCGGCGCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATCGATCCTGCTGGCCACCTGACCACGTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTATGAGGAAAGGCAGACGACCACACTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTTCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGAACCGAAACTGCCCAAGGACACGGTGGCGGTGGCGAAAGCGAAGGATCGCCACTTTTCGCTGTACGAAAAGATTGCCCAGGAGCATGCGCGCATCGGGGCGGAACAGGAAGCGGCCCGGCTAGCCTTTGAAGCTACCTCGGTGAAGTACGAGGAGGAGTGAGGCAGAGCGCGTTTGAGTATTTGAGAATAAAATGCAAATGTGATGATTCATC]

[+] EMBL BM613373             [CCGGCGCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATCGATCCTGCTGGCCACCTGACCACGTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTATGAGGAAAGGCAGACGACCACACTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTTCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGAACCGAAACTGCCCAAGGACACGGTGGCGGTGGCGAAAGCGAAGGATCGCCACTTTTCGCTGTACGAAAAGATTGCCCAGGAGCATGCGCGCA                                                                                                                        ]
[+] EMBL BX605126             [                                AAGTAGTGTATCGATCCTGCTGGCCACCTGACCACGTAGAAGTTGTTTCTGACAC   CTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGGGGAAAGGCAGACGACCACAGTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGAACCGAAACTGCCCAAGGACACGGTGGCGGTGGCGAAAGCGAAGGATCGCCACTTTTCGCTGTACGAAAAGATTGCCCAGGAGCATGCGCGCATCGGGGCGGAACAGGAAGCGGCCCGGCTAGCCTTTGAAGCTACCTCGGTGAAGTACGAGGAGGAGTGAGGCAGAGCGCGTTTGAGTATTTGAGAATAAAATGCAAATGTGATGATTCATC]
[+] EMBL BX617866             [                                                                                                        AACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGGGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTATGAGGAAAGGCAGACGACCACACTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTTCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCTGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGAACCGAAACTGCCCAAGGACACGGTGGCGGTGGCGAAAGCGAAGGATCGCCACTTTTCGCTGTACGAAAAGATTGCCCAGGAGCATGCGCGCATCGGGGCGGAACAGGAAGCGGCCCGGCTAGCCTTTGAAGCTACCTCGGTGAAGAACGAGGAGGAGTGAGGCAGAGCGCGTTTGA                                    ]


>consensus_8451#1 CCGGCGCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATCGATCCTGCTGGCCACC TGACCACGTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTC GCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGC CACAAGCCCCAGCTCGTGGTGGTGGAAGAGTATGAGGAAAGGCAGACGACCACACTGCCA CCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGAT CGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTC GATCCGCGCAATCAGGTTCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCG GTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAG AAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGG GCGGTGGAACCGAAACTGCCCAAGGACACGGTGGCGGTGGCGAAAGCGAAGGATCGCCAC TTTTCGCTGTACGAAAAGATTGCCCAGGAGCATGCGCGCATCGGGGCGGAACAGGAAGCG GCCCGGCTAGCCTTTGAAGCTACCTCGGTGAAGTACGAGGAGGAGTGAGGCAGAGCGCGT TTGAGTATTTGAGAATAAAATGCAAATGTGATGATTCATC



consensusID : consensus_8451#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 722
fasta sequence
                              [GCAGAATCNCCACGAGNTGACACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATC-GAT-CCTACTAGCCACCTGACCAC-GTAG--AAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGATGCGCACAGCGGACGGGCGGTGGAACCTAAACTGCCAAGGACACGGTGGCGGTGGCGAAAGCGAACGGATCGCCACTTGTTGACGGGCTTGGTAACGGAAAAACAGGATTGGCCCAAGGGAAGGCATTGCCGCGGCAATCGCGGGTCGGGCAACAAGGGAAGCNCGGGACCCGGGACTAGCCCTT]

[+] EMBL BX467295             [GCAGAATCNCCACGAGNTGACACGCTTGCTAAACGGACCNGTCTGAAGTAGTGTATC GAT CCTACTAGCCACCTGACCAC GTAG  AAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGATGCGCACAGCGGACGGGCGGTGGAACCTAAACTGCCAAGGACACGGTGGCGGTGGCGAAAGCGAACGGATCGCCACTTGTTGACGGGCTTGGTAACGGAAAAACAGGATTGGCCCAAGGGAAGGCATTGCCGCGGCAATCGCGGGTCGGGCAACAAGGGAAGCNCGGGACCCGGGACTAGCCCTT]
[+] EMBL AL930600             [                 gttnACGCTTGCT AACGGA CTGTCTGAAGTAGTGTATCTGATCCCTACTAGCCACCTGACCACGGTAGGAAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGG CG CGTGACGTGA CCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX621019             [                                 CGGACCTGTCTGAAGTAGTGTNTC GAT CCTACTAGCCACCTGACCAC GTAG  AAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGATGCGCACAGCGGACGGGCGGTGGAACCTAAACTGCC                                                                                                                                                     ]
[+] EMBL AL932807             [                                 CGGCCAGGTNT AAGTAGTGTATC GAT CCTACTAGCCACCTGACCAC GTAG  AAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCG ACGGTCGAGTATACGGCCGACT                                                                                                                                                                                                                                                                                                                  ]


>consensus_8451#2 GCAGAATCNCCACGAGNTGACACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATCGAT CCTACTAGCCACCTGACCACGTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCCAAC GATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCG TGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCAGAC GACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCC AGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTC CTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCA CGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGC CCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGATGC GCACAGCGGACGGGCGGTGGAACCTAAACTGCCAAGGACACGGTGGCGGTGGCGAAAGCG AACGGATCGCCACTTGTTGACGGGCTTGGTAACGGAAAAACAGGATTGGCCCAAGGGAAG GCATTGCCGCGGCAATCGCGGGTCGGGCAACAAGGGAAGCNCGGGACCCGGGACTAGCCC TT



consensusID : consensus_8451#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence
                              [GGACCTGTCTGAAGTAGTGTATCGATCCTGCTGGCCACCTGACCACGTAGAAGTTGTTTCTGACACCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGGGGAAAGGCAGACGACCACAGTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGTAAGCTTCGCGGTACGCAACCGGTTG]

[+] EMBL CNS09FND             [GGACCTGTCTGAAGTAGTGTATCGATCCTGCTGGCCACCTGACCACGTAGAAGTTGTTTCTGACACCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGGGGAAAGGCAGACGACCACAGTGCCACCGCCGCCGAAACCGTACGCCTTCACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGCCGACTCGCACGGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGTAAGCTTCGCGGTACGCAACCGGTTG]


>consensus_8451#3 GGACCTGTCTGAAGTAGTGTATCGATCCTGCTGGCCACCTGACCACGTAGAAGTTGTTTC TGACACCTGCTGCTGCTGCCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTA GTGTGCTGCCATGCTGGCCGCCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTG GAAGAGTACGGGGAAAGGCAGACGACCACAGTGCCACCGCCGCCGAAACCGTACGCCTTC ACGTACAGTGCCGGCCGCTCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGAC GGTAGCGGAGTGGTGCGCGGCTCCTTCTCCTACGTCGATCCGCGCAATCAGGTCCGCACG GTCGAGTATACGGCCGACTCGCACGGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACG CCCCAGCAGACGGAAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAG ATTGCGCAAGAGCATGCCGACGCGCACAGCGGACGGGCGGTGGTAAGCTTCGCGGTACGC AACCGGTTG



consensusID : consensus_8451#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 436
fasta sequence
                              [GCCCCGAGGCTTCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATTGATCCTACTACCACCTGACCACGTAAAGTTGTTTCTGCACCTGCTGCTGCTGCTGGCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCATGCTGGNCGCCGTGACGTGACCGCCACAAGCCCCAGCTCGTGGTGGTGTGAANAGAAGTACTGACGGACAATGTGCAGGACTGACCACCTCTGTCGCACACTGCCTGGCCGAAAACCTGTACTAGCCTTTCACCGTACAAGTGCGCNGGNCTGCTCCGACCAAGTGAACAACTGTTGGAATCTGCAACTGCAACAAGCTGATAGGTTGTCCGTGACTGTGTAAGCCGTGAAGGTTGTGTTGCTGCTGGCTCCTTTCTCCTAACGTCCGAATCCTGCTGC]

[+] EMBL AL931220             [GCCCCGAGGCTTCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATTGATCCTACTACCACCTGACCACGTAAAGTTGTTTCTGCACCTGCTGCTGCTGCTGGCAACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCATGCTGGNCGCCGTGACGTGACCGCCACAAGCCCCAGCTCGTGGTGGTGTGAANAGAAGTACTGACGGACAATGTGCAGGACTGACCACCTCTGTCGCACACTGCCTGGCCGAAAACCTGTACTAGCCTTTCACCGTACAAGTGCGCNGGNCTGCTCCGACCAAGTGAACAACTGTTGGAATCTGCAACTGCAACAAGCTGATAGGTTGTCCGTGACTGTGTAAGCCGTGAAGGTTGTGTTGCTGCTGGCTCCTTTCTCCTAACGTCCGAATCCTGCTGC]


>consensus_8451#4 GCCCCGAGGCTTCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATTGATCCTACTA CCACCTGACCACGTAAAGTTGTTTCTGCACCTGCTGCTGCTGCTGGCAACGATGCTGAAG CTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCATGCTGGNCGCCGTGACGTGACCG CCACAAGCCCCAGCTCGTGGTGGTGTGAANAGAAGTACTGACGGACAATGTGCAGGACTG ACCACCTCTGTCGCACACTGCCTGGCCGAAAACCTGTACTAGCCTTTCACCGTACAAGTG CGCNGGNCTGCTCCGACCAAGTGAACAACTGTTGGAATCTGCAACTGCAACAAGCTGATA GGTTGTCCGTGACTGTGTAAGCCGTGAAGGTTGTGTTGCTGCTGGCTCCTTTCTCCTAAC GTCCGAATCCTGCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8451#0      ------------------GCAAGAATCCGCGCACGAGTG---CTGAAGTAGTGTATCGAT 39
consensus_8451#1      -------------CCGGCGCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATCGAT 47
consensus_8451#2      GCAGAATCNCCACGAGNTGACACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATCGAT 60
consensus_8451#3      ----------------------------------GGACCTGTCTGAAGTAGTGTATCGAT 26
consensus_8451#4      -------GCCCCGAGGCTTCAACGCTTGCTAAACGGACCTGTCTGAAGTAGTGTATTGAT 53
                                                        *       ************** ***

consensus_8451#0      CCTACTAGCCACCTGACCACCGGTTAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCC 99
consensus_8451#1      CCTGCTGGCCACCTGACCACG---TAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCC 104
consensus_8451#2      CCTACTAGCCACCTGACCACG---TAGAAGTTGTTTCTGCCACCTGCTGCTGCTGCTGCC 117
consensus_8451#3      CCTGCTGGCCACCTGACCACG---TAGAAGTTGTTTCTGACACCTGCTGCTGCT---GCC 80
consensus_8451#4      CCTACTA-CCACCTGACCACG----TAAAGTTGTTTCTG-CACCTGCTGCTGCTGCTGGC 107
                      *** **  ************       ************ **************   * *

consensus_8451#0      AACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCG 159
consensus_8451#1      AACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCG 164
consensus_8451#2      AACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCG 177
consensus_8451#3      AACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGCCATGCTGGCCG 140
consensus_8451#4      AACGATGCTGAAGCTCGCATTCCTGGTGACGACGCTGGTAGTGTGCTGC-ATGCTGGNCG 166
                      ************************************************* ******* **

consensus_8451#0      CCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCA 219
consensus_8451#1      CCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTATGAGGAAAGGCA 224
consensus_8451#2      CCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGAGGAAAGGCA 237
consensus_8451#3      CCGTGACGTGACCCGCCACAAGCCCCAGCTCGTGGTGGTGGAAGAGTACGGGGAAAGGCA 200
consensus_8451#4      CCGTGACGTGACC-GCCACAAGCCCCAGCTCGTGGTGGTGTGAANA------GAAGTACT 219
                      ************* **************************  *         ***   * 

consensus_8451#0      GACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCA-CGTACAGTGCC-GGCCGC 277
consensus_8451#1      GACGACCACACTGCCACCGCCGCCGAAACCGTACGCCTTCA-CGTACAGTGCC-GGCCGC 282
consensus_8451#2      GACGACCACTCTGCCACCGCCGCCGAAACCGTACGCCTTCA-CGTACAGTGCC-GGCCGC 295
consensus_8451#3      GACGACCACAGTGCCACCGCCGCCGAAACCGTACGCCTTCA-CGTACAGTGCC-GGCCGC 258
consensus_8451#4      GACGGACAATGTGC----------AGGACTGACCACCTCTGTCGCACACTGCCTGGCCGA 269
                      ****  **   ***             ** *  * ***    ** *** **** ***** 

consensus_8451#0      TCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGC 337
consensus_8451#1      TCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGC 342
consensus_8451#2      TCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGC 355
consensus_8451#3      TCGCCAGGACACGTGGATCGCACGCACAGCGAGGTGTCGGACGGTAGCGGAGTGGTGCGC 318
consensus_8451#4      AAACCTGTACTAGCCTTTCAC-CGTACAA--GTGCGCNGGNCTGCTCCGACCAAGTGAAC 326
                         ** * **  *    ** * ** ***     * *  ** * *   **     ***  *

consensus_8451#0      GGCTCCT----TCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGC 393
consensus_8451#1      GGCTCCT----TCTCCTACGTCGATCCGCGCAATCAGGTTCGCACGGTCGAGTATACGGC 398
consensus_8451#2      GGCTCCT----TCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGC 411
consensus_8451#3      GGCTCCT----TCTCCTACGTCGATCCGCGCAATCAGGTCCGCACGGTCGAGTATACGGC 374
consensus_8451#4      AACTGTTGGAATCTGCAACTGCAACAAGC-TGATAGGTTGTCCGTGACTGTGTAAGC--- 382
                        **  *    *** * **  * *   **   **  * *   *  *   * ***  *   

consensus_8451#0      CGACTCGCACGG-TTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAGGCAGACGG 452
consensus_8451#1      CGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAG-CAGACGG 457
consensus_8451#2      CGACTCGCACGGCTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAG-CAGACGG 470
consensus_8451#3      CGACTCGCACGGGTTCTACCCGGTGCTGAGCCATCTGCCCGCGACGCCCCAG-CAGACGG 433
consensus_8451#4      -----CGTGAAGGTTGTGTT-GCTGCTG-GCTCCTTTCTCCTAACGTCCGAATCCTGCTG 435
                           **    * ** *    * ***** **    * * *   *** ** *  *   * *

consensus_8451#0      AAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATTTGCGCAAAGA 512
consensus_8451#1      AAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATT-GCGCAA-GA 515
consensus_8451#2      AAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATT-GCGCAA-GA 528
consensus_8451#3      AAGCGGTCGCCCGGGCCCAGGAGAAACACTTCGCCCTGTACGCCAAGATT-GCGCAA-GA 491
consensus_8451#4      C----------------------------------------------------------- 436
                                                                                  

consensus_8451#0      GCATGCCGATGCGCACAAGCGGACGGGGCGGTGGAACCTTAAAACTGCCCCAAGGGACAA 572
consensus_8451#1      GCATGCCGACGCGCACA-GCGGACGGG-CGGTGGAACC--GAAACTGCCC--AAGGACA- 568
consensus_8451#2      GCATGCCGATGCGCACA-GCGGACGGG-CGGTGGAACCT--AAACTGCC---AAGGACA- 580
consensus_8451#3      GCATGCCGACGCGCACA-GCGGACGGG-CGGTGGT------AAGCTTCGCGGTACGCAAC 543
consensus_8451#4      ------------------------------------------------------------
                                                                                  

consensus_8451#0      CGGTGGCGGGTGGCGAAAAGCGAAGGGATTCGGCCACTTTTTTC--GGCT--GTA-CNGA 627
consensus_8451#1      CGGTGGCGG-TGGCGAAA-GCGAAGGA---TCGCCACTTTTC-----GCT--GTA-CG-- 613
consensus_8451#2      CGGTGGCGG-TGGCGAAA-GCGAACGGA--TCGCCACTTGTTGACGGGCTTGGTAACGGA 636
consensus_8451#3      CGGTTG------------------------------------------------------ 549
consensus_8451#4      ------------------------------------------------------------
                                                                                  

consensus_8451#0      GAAA--GGATTGGCCCA--GGAAGCAATG--CGCGGCA-TTCGGGGGCGGG-AACA--GG 677
consensus_8451#1      -AAA--AGATTG-CCCA--GGAGC--ATG--CGCG-CA-TC--GGGGCGG--AACA--GG 655
consensus_8451#2      AAAACAGGATTGGCCCAAGGGAAGGCATTGCCGCGGCAATCGCGGGTCGGGCAACAAGGG 696
consensus_8451#3      ------------------------------------------------------------
consensus_8451#4      ------------------------------------------------------------
                                                                                  

consensus_8451#0      AANGCCGGG-CCCCGGNTTAGCCTTTTGAAGGCAACCTTCGGGTTAAAGTNCGAGGGAGG 736
consensus_8451#1      AAGC---GG-CCC--GGCTAGCCTTT--GAAGCTACCTC---GGTGAAGTACGAGG--AG 702
consensus_8451#2      AAGCNCGGGACCCGGGACTAGCCCTT---------------------------------- 722
consensus_8451#3      ------------------------------------------------------------
consensus_8451#4      ------------------------------------------------------------
                                                                                  

consensus_8451#0      GANTTAGGCCAGGAGCCATGTTTGANGGATTTTTCAGAATGCA-TGCCAATTTTATGGTT 795
consensus_8451#1      GAGTGAGGCAGAG---CGCGTTTGAG---TATTTGAGAATAAAATGCAAATGTGATGATT 756
consensus_8451#2      ------------------------------------------------------------
consensus_8451#3      ------------------------------------------------------------
consensus_8451#4      ------------------------------------------------------------
                                                                                  

consensus_8451#0      CC-- 797
consensus_8451#1      CATC 760
consensus_8451#2      ----
consensus_8451#3      ----
consensus_8451#4      ----
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)