These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8488#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1902 fasta sequence [CCACCACCGGCAGCTCGACACCGCCCCCCAGCTCGCTCGGTGGGGCCGGCCCGCCCACGCGTCCGC-CCACGC-GTCCGCGATACGGCGCGACCCGTCCGAGAACGACCGGATGCTGAAGGAGCTACAGTTCGCGTTCGCGGAAACGACGGCCCAGGGCGAGCTGGCCAAGTTCCTGCGCGAGTGCTCGAACGCGCCGACGCTGCACGAGTTCGACGTGATGCGGTCGAGCGGTGCGGACACGCTCACCGAGGAGGACCACATCATCGACGGCAGCCGGATACTGACCGAGGCCGACACCTGCCCGGACAGCGGCGAGGACGAGGAGGAGGGCGACGTGCTGGCGGATCTGACCCGCCAGCTCGAGCAGTTCGAAACGTCCCTGCCCGAGTACGAGGATCTCGTCACCTCCCTCTGCCAGTCGATCGACAGCAACTCGAACAGCTAAGCGGGTGAAGAAGCTGGGAAGGAGTGGAGTCCAGCCGGGATTATATGTATATGATATGATTAATTTTAGCGAGGGAACCAACCTGTCGACTGATACTTTTTTTTGATGATATTCATCTTCACACACACACACACAGACACAGGCAACTAAAGTAAAGCATTAAGTACGACACGTGTGCGCGTGTGTGTATACGCTAAACATGGCAAAAAGCGTTTGAATTGAGACAGTGTGTAGCAGCGGCCAAAGAGGAAGGAAATGAAAGGAATTGTTTTATGCTGTTGGGGAAGGGTTTTGCGAGGGGAAGCAGTGAGGAAGGAAGTTTAGAATGGCCATGAGTGTAGTTTTT-TCTTTTTTCTTTTGCAAAAGATCCATTTTCCTTGCCTTAGCCATTTAGAAAGATGAGGATTCAACACAGAACACTGTAGCGTTTAGGCGGCTGCGTATGTGTGGTATGATGTTGCTGCAAAAATCTATCTTTATGATCGATACATCGATGAATCAAAGTTCCTTAGCGTGTGTGCGTGACTAGTGATGAGGGGGATGGGGGAGCGAGGGGATGGGAATGGGACGTTAGGCAAAGAAGTAGAGGAGTTCGATATCATCCCCTTCGCTAAACAAACCCCCATTACAGAAAGGATATTTACATTCATTTAACGGTTATTATTTATCCAACTAGGAGACAAAAGCAAGCAAAATTATATTCTAATTAGTACTTTAGCGCAACTACTGCTTCTACTATCAGCCATATATATAT--ACACATACAGACACACACCATTTATACGGCGGCAAAGGAAAGCTTTCCGCTCCAATATATGTTTTGCATATCGCGGGTGTGCGGTTTTTGCACACCCCTCAATGGGTCTTTTCGTGGAAAAATGTTGGAACCCAATTGGCTTTAATTCGTGTTTTTTTGC-TTTTTCCCTTTTTAGTCCCCCCATTTTTTGCTTTAAGCGCGATATGTAAGAAGGAAGGGGAAGTAGTAGCTTTTAGTGAGGTAAACCAGTAACCAGATTGTTAAGAAACAAAGCTTATAAGGCAAGGAAGGAGAAAGCGAGTTTACGTTCTTTATGGAAATGTTTCCCAGCAACACACCCTCTCTCCCACCCATTCGGAAGCACTGGTCTGCTGTAAATAGTACAAAAAGGGCAACGGCTAAACCAACGGTTGCTTTTAGTAGCCTTCTTTTATATTATTTTCATTTTGCATTCATTTGTAAATAGACAACACAATACAATTATTCAGTTATTTACTCTTTCGATGTTAGAAAGTGCTTTGGGGGCAATGAGATGGGTGGAGGGAAAACACTTTCCCATACTGGAACGTAAACTCATGGCGCAATGAAATGTTTGAATCGAAGAGAG-AAACTACTACTGCGTATGGAACGATTAATCAAAAAATACATCGGTAAAGTCAGACAGTCCGCGGCCGCCGAGGAGGTGGTGTGCCTGTGCGTATGT] [+] EMBL BM627881 [ CCGCCCACGCGTCCGC CCACGC GTCCGCGATACGGCGCGACCCGTCCGAGAACGACCGGATGCTGAAGGAGCTACAGTTCGCGTTCGCGGAAACGACGGCCCAGGGCGAGCTGGCCAAGTTCCTGCGCGAGTGCTCGAACGCGCCGACGCTGCACGAGTTCGACGTGATGCGGTCGAGCGGTGCGGACACGCTCACCGAGGAGGACCACATCATCGACGGCAGCCGGATACTGACCGAGGCCGACACCTGCCCGGACAGCGGCGAGGACGAGGAGGAGGGCGACGTGCTGGCGGATCTGACCCGCCAGCTCGAGCAGTTCGAAACGTCCCTGCCCGAGTACGAGGATCTCGTCACCTCCCTCTGCCAGTCGATCGACAGCAACTCGAACAGCTAAGCGGGTGAAGAAGCTGGGAAGGAGTGGAGTCCAGCCGGGATTATATGTATATGATATGATTAATTTTAGCGAGGGAACCAACCTGTCGACTGATACTTTTTTTTGATGATATTCATCTTCACACACACACACACAGACACAGGCAACTAAAGTAAAGCATTAAGTACGACACGTGTGCGCGTGTGTGTATACGCTAAACATGGCAAAAAGCGTTTGAATTGAGACAGTGTGTAGCAGCGGCCAAAGAGGAAGGAA ] [+] EMBL AGA283362 [ccaccaccggcagctcgacaccgccccccagctcgctcggtggggccggcagtgagctGCG CCGCTCCTCCCGGTGGTCGATACGGCGCGACCCGTCCGAGAACGACCGGATGCTGAAGGAGCTACAGTTCGCGTTCGCGGAAACGACGGCCCAGGGCGAGCTGGCCAAGTTCCTGCGCGAGTGCTCGAACGCGCCGACGCTGCACGAGTTCGACGTGATGCGGTCGAGCGGTGCGGACACGCTCACCGAGGAGGACCACATCATCGACGGCAGCCGGATACTGACCGAGGCCGACACCTGCCCGGACAGCGGCGAGGACGAGGAGGAGGGCGACGTGCTGGCGGATCTGACCCGCCAGCTCGAGCAGTTCGAAACGTCCCTGCCCGAGTACGAGGATCTCGTCACCTCCCTCT ] [-] EMBL AGA284654 [ GAGGGCGACGTGCTGGCGGATCTGACCCGCCAGCTCGAGCAGTTCGAAACGTCCCTGCCCGAGTACGAGGATCTCGTCACCTCCCTCTGCCAGTCGATCGACAGCAACTCGAACAGCTAAGCGGGTGAAGAAGCTGGGAAGGAGTGGAGTCCAGCCGGGATTATATGTATATGATATGATTAATTTTAGCGAGGGAACCAACGTGTCGACTGATACTTTTTTT ] [+] EMBL BX624894 [ ATATGATATGATTAATTTTANCNAGGGAACCAACCTGTCGACTGATACTTTTTTTTGATGATATTCATCTTCNCACACACAC ] [+] EMBL BX618002 [ TAAACATGGCAAAAAGCGTTTGAATTGAGACAGTGTGTAGCAGCGGCCAAAGAGGAAGGAAATGAAAGGAATTGTTTTATGCTGTTGGGGAAGGGTTTTGCGAGGGGAAGCAGTGAGGAAGGAAGTTTAGAATGGCCATGAGTGTAGTTTTT TCTTTTTTCTTTTGCAAAAGATCCATTTTCCTTGCCTTAGCCATTTAGAAAGATGAGGATTCAACACAGAACA ] [-] EMBL BM621149 [ AATGCCCATGAGTGTAGTTTTTCTTTTTTTTCTTTTGCAAAAGATCCATTTTCCTTGCCTTAGCCATTTAGAAAGATGAGGATCAAACACAGAACACTGTAGCGTTTAGGCGGCTGCGTATGTGTGGTATGATGTTGCTGCAAAAATCTATCTTTATGATCGATACATCGATGAATCAAAGTTCCTTAGCGTGTGTGCGTGACTAGTGATGAGGGGGATGGGAGAGCGAGGGAATGGGAATGGGACGTTAGGCAAAGAAGTAGAGGAGTTCGATATCATCCCCTTCGCTAAACAAACCCCCATTACAGAAAGGATATTTACATTCATTTAACGGTTATTATTTATCCAACTAGGAGACAAAAGCAAGCAAAATTATATTCTAATTAGTACTTTAGCGCAACTACTGCTTCTACTATCAGCCATATATATATACACACATACAGACACACACCATTTATACGGCGGCAAAGGAAAGCTTTCCGCTCCAATATATGTTTTGCATATCGCGGGTGTGCGGTTTTTGCACACCCCTCAATGGGTCTTTTCGTGGAAAAATGTTGGAACCCAATTGGCTTTAATTCGTGTTTTTTTGCTTTTTTCCCTTTTTAGTCCCCCCccccgg ] [+] EMBL BX617458 [ CAAAGTTCCTTAGCGTGTGTGCGTGACTAGTGATGAGGGGGATGGGGGAGCGAGGGGATGGGAATGGGACGTTAGGCAAAGAAGTAGAGGAGTTCGATATCATCCCCTTCGCTAAACAAACCCCCATTACAGAAAGGATATTTACATTCATTTAACGGTTATTATTTATCCAACTAGGAGACAAAAGCAAGCAAAATTATATTCTAATTAGTACTTTAGCGCAACTACTGCTTCTACTATCAGCCATATATATAT ACACATACAGACACACACCATTTATACGGCGGCAAAGGAAAGCTTTCCGCTCCAATATATGTTTTGCATATCGCGGGTGTGCGGTTTTTGCACACCCCTCAATGGGTCTTTTCGTGGAAAAATGTTGGAACCCAATTGGCTTTAATTCGTGTTTTTTTGC TTTTTCCCTTTTTAGTCCCCCCATTTTTTGCTTTAAGCGCGATATGTAAGAAGGAAGGGGAAGTAGTAGCTTTTAGTGAGGTAAACCAGTAACCAGATTGTTAAGAAACAAAGCTTATAAGGCAAGGAAGGAGAAAGCGAGTTTACGTTCTTTATGGAAATGTTTCCCAGCAACACACCCTCTCTCCCACCCATTCGGAAGCACTGGTCTGCTG ] [+] EMBL BX622148 [ AGGGGGATGGGGGAGCGAGGGGATGGGAATGGGACGTTAGGCAAAGAAGTAGAGGAGTTCGATATCATCCCCTTCGCTAAACAAACCCCCATTACAGAAAGGATATTTACATTCATTTAACGGTTATTATTTATCCAACTAGGAGACAAAAGCAAGCAAAATTATATTCTAATTAGTACTTTAGCGCAACTACTGCTTCTACTATCAGCCATATATATAT ACACATACAGACACACACCATTTATACGGCGGCAAAGGAAAGCTTTCCGCTCCAATATATGTTTTGCATATCGCGGGTGTGCGGTTTTTGCACACCCCTCAATGGGTCTTTTCGTGGAAAAATGTTGGAACCCAATTGGCTTTAATTCGTGTTTTTTTGC TTTTTCCCTTTTTAGTCCCCCCATTTTTTGCTTTAAGCGCGATATGTAAGAAGGAAGGGGAAGTAGTAGCTTTTAGTGAGGTAAACCAGTAACCAGATTGTTAAGAAACAAAGCTTATAAGGCAAGGAAGGAGAAAGCGAGTTTACGTTCTTTATGGAAATGTTTCCCAGCAACACACCCTCTCTCCCACCCATTCGGAAGCACTGGTCTGCTGTAAATAGTACAAAAAGGGCAACGGCTAAACCAACGGTTGCTTTTAGTAGCCTTCTTTTATATTATTTTCATTTTGCATTCATTTGTAAATAGACAACACAATACAATTATTCAGTTATTTACTCTTTCGATGTTAGAAAGTGCTTTGGGGGCAATGAGATGGGTGGAGGGAAAACACTTTCCCATACTGGAACGTAAACTCATGGCGCAATGAAATGTTTGAATCGAAGAGAG AAACTACTACTGCGTATGGAACGAT ] [+] EMBL BX606564 [ ACAAACCCCCATTACAGAAAGGATATTTACATTCATTTAACGGTTATTATTTATCCAACTAGGAGACAAAAGCAAGCAAAATTATATTCTAATTAGTACTTTAGCGCAACTACTGCTTCTACTATCAGCCATATATATAT ACACATACAGACACACACCATTTATACGGCGGCAAAGGAAAGCTTTCCGCTCCAATATATGTTTTGCATATCGCGGGTGTGCGGTTTTTGCACACCCCTCAATGGGTCTTTTCGTGGAAAAATGTTGGAACCCAATTGGCTTTAATTCGTGTTTTTTTGC TTTTTCCCTTTTTAGTCCCCCCATTTTTTGCTTTAAGCGCGATATGTAAGAAGGAAGGGGAAGTAGTAGCTTTTAGTGAGGTAAACCAGTAACCAGATTGTTAAGAAACAAAGCTTATAAGGCAAGGAAGGAGAAAGCGAGTTTACGTTCTTTATGGAAATGTTTCCCAGCAACACACCCTCTCTCCCACCCATTCGGAAGCACTGGTCTGCTGTAAATAGTACAAAAAGGGCAACGGCTAAACCAACGGTTGCTTTTAGTAGCCTTCTTTTATATTATTTTCATTTTGCATTCATTTGTAAATAGACAACACAATACAATTATTCAGTTATTTACTCTTTCGATGTTAGAAAGTGCTTTGGGGGCAATGAGATGGGTGGAGGGAAAACACTTTCCCATACT GAACGTAAACTCATGGCGCAATGAAATGTTTGAATCGAAGAGAGAAAACTACTACTGCGTATGGAACGATTAATCAAAAAATACATCGGTAAAGTCAGACAGTCCGCGGCCGCCGAGGAGGTGGTGTGCCTGTGCGTATGT] [+] EMBL BX603144 [ ACTATCAGCCATATATATAT ACACATACAGACACACACCATTTATACGGCGGCAAAGGAAAGCTTTCCGCTCCAATATATGTTTTGCATATCGCGGGTGTGCGGTTTTTGCACACCCCTCAATGGGTCTTTTCGTGGAAAAATGTTGGAACCCAATTGGCTTTAATTCGTGTTTTTTTGC TTTTTCCCTTTTTAGTCCCCCCATTTTTTGCTTTAAGCGCGATATGTAAGAAGGAAGGGGAAGTAGTAGCTTTTAGTGAGGTAAACCAGTAACCAGATTGTTAAGAAACAAAGCTTATAAGGCAAGGAAGGAGAAAGCGAGTTTACGTTCTTTATGGAAATGTTTCCCAGCAACACACCCTCTCTCCCACCCATTCGGAAGCACTGGTCTGCTG ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||