Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8495 cluster # 8495       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8495#0 length = 1143 sequences # 7  
consensus_8495#1 length = 1097 sequences # 1  
consensus_8495#2 length = 624 sequences # 2  

consensusID : consensus_8495#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1143
fasta sequence
                              [TGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGG--TCAGACAGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGCCATTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGCGCTACCGTACACGCGCGTGGTGGGATGATGGTAACGCCAGACCCCACCCCGCCCCCCCTCCCCCCGCCCTACCCCCTCTGCCTGTTGGCAGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAGGCTCCGTGTGCTGCCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTACGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATCGAACGGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCACACGGGTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGCCATCCGGGGAACCTTTCGCTCAGCCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCCGTTGCCCCCTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTGTCTGTGTGCGGGTGCGTGTGCGCGAAAAGAGTGTGCGGTGTGCAGCGAGAAGCGCCACGATGGTGGCGAACAAGTCGGTGAAGAAGAAGAATAAGAAGAAGAAGAAGAAGACGCAGAGCAAGAAGGAAAAGAAGAGGAAGAAGAAGAAACACTTGAACTAAAAAATAAAGACGTTGTTAAGATTATGAAATGTTTTA]

[+] EMBL BX610535             [TGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGG  TCAGACAGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGCCATTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGCGCTACTGTACACGCGCGTGGTGGGATGATGGTAACGCCAGACCCCACCCCGCCCCCCCTCCCCCCGCCCTACCCCCTCTGCCTGTTGGCAGAACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX610536             [          GGAGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGG  TCAGACAGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGCCATTATTATTATTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX611054             [                                                      AGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGGTATCAGACAGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTTTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGCAGATTATTATTATTATTATTATTGTTATTATTGATATTATTATTGATGTTATTATTATTGCCATTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGCGCTACCGTACACGCGCGTGGTGGGATGATGGTAACGCCAGACCCCACCCCGCCCCCCCTCCCCCCACCCTACCCCCTCTGCCTGTTGGCAGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAGGCTCCGTGTGCTGCCTGCTCGTACGAGAATAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTACGGATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX610039             [                                                                                                                                                                                                                                                                                                                                                                                          CGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGCGCTACCGTACACGCGCGTGGTGGGATGATGGTAACGCCAGACCCCACCCCGCCCCCCCTCCCCCCACCCTACCCCCTCTGCCTGTTGGCAGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAGGCTCCGTGTGCTGCCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTACGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATCGAACGGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCACACGGGTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGCCATCCGGGGAACCTTTCGCTCAGCCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCCGTTGCCCCCTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTGTCTGTGTGCGGGT                                                                                                                                                                                        ]
[+] EMBL BX618447             [                                                                                                                                                                                                                                                                                                                                                                                                            CAAAAGCCTTTCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGCGCTACCGTACACGCGCGTGGTGGGATGATGGTAACGCCAGACCCCACCCCGCCCCCCCTCCGCCCGCCCTACCCCCTCTGCCTGTTGGCAGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAGGCTCCGTGTGCTGCCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTACGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATCGAACGGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCACACGGGTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGCCATCCGGGGAACCTTTCGCTCAGCCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCCGTTGCCCCCTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTGTCTGTGTGCGGGTGCGTGTGCGCGAAAAGAGTGTGCGGTGTGCAGCGAGAAGCGCCACGATGGTGGCGAACAAGTCGGTGAAGAAGAAGAATAAGAAGAAGAAGAAGAAGACGCAG                                                                                 ]
[+] EMBL BX615585             [                                                                                                                                                                                                                                                                                                                                                                                                                                      AGAGCGCTAGCAAAAACGGTTCTTTGCTTTCGCTACCGTACACGCGCGTGGTGGGATGATGGTAACGCCAGACCCCACCCCGCCCCCCCTCCCCCCGCCCTACCCCCTCTGCCTGTTGGCAGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAGGCTCCGTGTGCTGCCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTACGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATCGAACGGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCACACGGGTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGCCATCCGGGGAACCTTTCGCTCAGCCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCCGTTGCCCCCTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTGTCTGTGTGCGGGTGCGTGTGCGCGAAAAGAGTGTGCGGTGTGCAGCGAGAAGCGCCACGATGGTGGCGAACAAGTCGGTGAAGAAGAAGAAT   AAGAAGAAGAAGAAGACGCAGAGCAAGAAGGAAAAGAAGAGGAAGAAGAAGAAACACTTGAACTAAAAAATAAAGACGTTGTTAAGATTATGAAATGTTTTA]
[+] EMBL BX611081             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTACGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATCGAACGGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCACACGGGTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGCCATCCGGGGAACCTTTCGCTCAGCCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCCGTTGCCCCCTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTGTCTGTGTGCGGGTGCGTGTGCGCGAAAAGAGTGTGCGGTGTGCAGCGAGAAGCGCCACGATGGTGGCGAA                                                                                                                               ]


>consensus_8495#0 TGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAA AGGATAGAAATAGAAATCACGGAAAAAACGGTCAGACAGTAATCACACGCAAACACACAC ACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTGTACGTGGGACGAA GTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCA ATAAGAGCGGGACCGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTATTAT TGATATTATTATTAATGTTATTATTATTGCCATTATTATTATTAATAATAATAATACTAA TCAGTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGAC AGAGCGCCAGCAAAAACGGTTCTTTGCTAGCGCTACCGTACACGCGCGTGGTGGGATGAT GGTAACGCCAGACCCCACCCCGCCCCCCCTCCCCCCGCCCTACCCCCTCTGCCTGTTGGC AGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAGGCTC CGTGTGCTGCCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGAAGTA CGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATCGAAC GGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCACACGG GTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGCCATCCGGGGAACCTTTCGCTCAG CCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCCGTTGCCCC CTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTGTCTGTGTGCGGGTG CGTGTGCGCGAAAAGAGTGTGCGGTGTGCAGCGAGAAGCGCCACGATGGTGGCGAACAAG TCGGTGAAGAAGAAGAATAAGAAGAAGAAGAAGAAGACGCAGAGCAAGAAGGAAAAGAAG AGGAAGAAGAAGAAACACTTGAACTAAAAAATAAAGACGTTGTTAAGATTATGAAATGTT TTA



consensusID : consensus_8495#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1097
fasta sequence
                              [CAAGAATCCCCGAGGTACTTACATGTGCTAGTGTGTGTGTGTACGTGTACGTGTGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTTGTCAATAAGAGCGGGACCTGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTATTTGATATTATTATGAATGTTATTATTATTACCATTATTATTATTAATAATAATAATACTAATCACTATGAATTAACACTGATTTGCCANGCACTGCTGTGCAAAATGCGTATCTGNGCTGCCAGCTGTGACATGAGCTGCCAGCAAAAAACTGTGTTTCCTTTTTTGCTTATGCTGCTTAACCTGTAAACAAACCTGCTGCTGTTGTGGTTGTGTGACTTGAATTGTGGTTAAACTTGCCCATGAACCCCCCAAACACACCAAATTTACACANTAACCTTTGTTCNTCAGACATAGACANCCANACNAACNANACACCCCAAAAAANCNCAGTAACTAGAANACAACAAACGNGANGAAGGCAGAAANACNNAAAGANANANANAACCCCGANCNACACAANCAAAANAAACAAAACANAAGACAAANGCACAAAGGGACANCAAACACACAAAACANAACAACACAACAGNANCACGGAAAAAACAACAACACAAAAGAAACNAAAANAATAAAAGAAAAGAAAAGCAAANCAGAGGACAAAANATNNCNAAACAACAGGACCAAAAGANGGGGANGGNGAGCAATGGAANAACANAGGGGAACNCGCCAANCTNGGCANAAGAAGACGCAANAACACATAAACCNACACAATAAANACATAANNCTTAAATATCCNNCATAAAANCCAAAANCAAATACACAANTAAAAAAAAAATAATAACATNTTAAACAAANAAANANAACAATCACTACATAAACCACCATTNCCCATCACCACACCACTTCATAAACNANCTACCTAANNCTNANACCTATCNTACATACCNTAAAACCNANCTACTAACACTCNAATCTAANACAATCANTAAATANTAAAANAACATAAATCCCATTTCACACAGAACATCTCAAACC]

[+] EMBL AL931406             [CAAGAATCCCCGAGGTACTTACATGTGCTAGTGTGTGTGTGTACGTGTACGTGTGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTTGTCAATAAGAGCGGGACCTGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTATTTGATATTATTATGAATGTTATTATTATTACCATTATTATTATTAATAATAATAATACTAATCACTATGAATTAACACTGATTTGCCANGCACTGCTGTGCAAAATGCGTATCTGNGCTGCCAGCTGTGACATGAGCTGCCAGCAAAAAACTGTGTTTCCTTTTTTGCTTATGCTGCTTAACCTGTAAACAAACCTGCTGCTGTTGTGGTTGTGTGACTTGAATTGTGGTTAAACTTGCCCATGAACCCCCCAAACACACCAAATTTACACANTAACCTTTGTTCNTCAGACATAGACANCCANACNAACNANACACCCCAAAAAANCNCAGTAACTAGAANACAACAAACGNGANGAAGGCAGAAANACNNAAAGANANANANAACCCCGANCNACACAANCAAAANAAACAAAACANAAGACAAANGCACAAAGGGACANCAAACACACAAAACANAACAACACAACAGNANCACGGAAAAAACAACAACACAAAAGAAACNAAAANAATAAAAGAAAAGAAAAGCAAANCAGAGGACAAAANATNNCNAAACAACAGGACCAAAAGANGGGGANGGNGAGCAATGGAANAACANAGGGGAACNCGCCAANCTNGGCANAAGAAGACGCAANAACACATAAACCNACACAATAAANACATAANNCTTAAATATCCNNCATAAAANCCAAAANCAAATACACAANTAAAAAAAAAATAATAACATNTTAAACAAANAAANANAACAATCACTACATAAACCACCATTNCCCATCACCACACCACTTCATAAACNANCTACCTAANNCTNANACCTATCNTACATACCNTAAAACCNANCTACTAACACTCNAATCTAANACAATCANTAAATANTAAAANAACATAAATCCCATTTCACACAGAACATCTCAAACC]


>consensus_8495#1 CAAGAATCCCCGAGGTACTTACATGTGCTAGTGTGTGTGTGTACGTGTACGTGTGGACGA AGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTTGT CAATAAGAGCGGGACCTGCTTATGAAAACAGCAGATTATTATTATTATTATTATTATTAT TTGATATTATTATGAATGTTATTATTATTACCATTATTATTATTAATAATAATAATACTA ATCACTATGAATTAACACTGATTTGCCANGCACTGCTGTGCAAAATGCGTATCTGNGCTG CCAGCTGTGACATGAGCTGCCAGCAAAAAACTGTGTTTCCTTTTTTGCTTATGCTGCTTA ACCTGTAAACAAACCTGCTGCTGTTGTGGTTGTGTGACTTGAATTGTGGTTAAACTTGCC CATGAACCCCCCAAACACACCAAATTTACACANTAACCTTTGTTCNTCAGACATAGACAN CCANACNAACNANACACCCCAAAAAANCNCAGTAACTAGAANACAACAAACGNGANGAAG GCAGAAANACNNAAAGANANANANAACCCCGANCNACACAANCAAAANAAACAAAACANA AGACAAANGCACAAAGGGACANCAAACACACAAAACANAACAACACAACAGNANCACGGA AAAAACAACAACACAAAAGAAACNAAAANAATAAAAGAAAAGAAAAGCAAANCAGAGGAC AAAANATNNCNAAACAACAGGACCAAAAGANGGGGANGGNGAGCAATGGAANAACANAGG GGAACNCGCCAANCTNGGCANAAGAAGACGCAANAACACATAAACCNACACAATAAANAC ATAANNCTTAAATATCCNNCATAAAANCCAAAANCAAATACACAANTAAAAAAAAAATAA TAACATNTTAAACAAANAAANANAACAATCACTACATAAACCACCATTNCCCATCACCAC ACCACTTCATAAACNANCTACCTAANNCTNANACCTATCNTACATACCNTAAAACCNANC TACTAACACTCNAATCTAANACAATCANTAAATANTAAAANAACATAAATCCCATTTCAC ACAGAACATCTCAAACC



consensusID : consensus_8495#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 624
fasta sequence
                              [TCCCCCGAGGTTATAGCAAGGTGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGGTATCAGACAGTAATCACACGCAA--ACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGGCAGATTATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGGCCATTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGNCGCTACCGTACACGCGCGTGGTGGGGATGACTGGTAAACGGCCCCAGAAACCCCCAAACACAGACACAAANCACACANCACACCAACACACAAACAACACAAACAAAACAACAACACAAAAAAAAAAAAACAAAACAACAAAACAACA]

[+] EMBL AL692347             [TCCCCCGAGGTTATAGCAAGGTGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGGTATCAGACAGTAATCACACGCAA  ACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTATGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGGCAGATTATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGGCCATTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGNCGCTACCGTACACGCGCGTGGTGGGGATGACTGGTAAACGGCCCCAGAAACCCCCAAACACAGACACAAANCACACANCACACCAACACACAAACAACACAAACAAAACAACAACACAAAAAAAAAAAAACAAAACAACAAAACAACA]
[+] EMBL BM640760             [                               ccgGGAGAAAAACGGTCACAACATGAAGGAAATGCTCGAGATCGAGAAAATCGATAGAAATAGAAATCACGGAAAAAACGGTATCAGACAGTAATCACACGCAAACACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTGTGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACATAAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACA GCAGATTATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATT GCCATTATTATTATTAATAATAATAATACTAATCACTATGAATTAACACGATTGCCAGCACGCTGGCAAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCT                                                                                                                                                            ]


>consensus_8495#2 TCCCCCGAGGTTATAGCAAGGTGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGG AAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGGTATCAGAC AGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTA TGTGTACGTGTACGTGGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACAT AAAGGTGTGGGAATGTTTTGTCAATAAGAGCGGGACCGCTTATGAAAACAGGCAGATTAT TATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGGCCATTA TTATTATTAATAATAATAATACTAATCAGTATGAATTAACACGATTGCCAGCACGCTGGC AAAAGCGTATCGGCGCCAGCTGGACAGAGCGCCAGCAAAAACGGTTCTTTGCTAGNCGCT ACCGTACACGCGCGTGGTGGGGATGACTGGTAAACGGCCCCAGAAACCCCCAAACACAGA CACAAANCACACANCACACCAACACACAAACAACACAAACAAAACAACAACACAAAAAAA AAAAAACAAAACAACAAAACAACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8495#0      ---------------------TGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGG 39
consensus_8495#2      TCCCCCGAGGTTATAGCAAGGTGGCAAAGAAGGAGGAGAAAAACGGTCACAACATGAAGG 60
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      AAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGGT--CAGAC 97
consensus_8495#2      AAATGCTCGAGATCGAGAAAAAGGATAGAAATAGAAATCACGGAAAAAACGGTATCAGAC 120
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      AGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTA 157
consensus_8495#2      AGTAATCACACGCAAACACACACACACACTCACACACAGACTTACATGTGCTAGTGTGTA 180
consensus_8495#1      ----------------------CA-AGAATCCCCGAGGTACTTACATGTGCTAGTGTGTG 37
                                            ** * * ** *  *   ******************** 

consensus_8495#0      TGTGTACGTGTACGTG-GGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACA 216
consensus_8495#2      TGTGTACGTGTACGTG-GGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACA 239
consensus_8495#1      TGTGTACGTGTACGTGTGGACGAAGTGATGCGGAACGGTCACTGTGAGTTTCTGTCGACA 97
                      **************** *******************************************

consensus_8495#0      TAAAGGTGTGGGAATGTTTT-GTCAATAAGAGCGGGACC-GCTTATGAAAACAG-CAGAT 273
consensus_8495#2      TAAAGGTGTGGGAATGTTTT-GTCAATAAGAGCGGGACC-GCTTATGAAAACAGGCAGAT 297
consensus_8495#1      TAAAGGTGTGGGAATGTTTTTGTCAATAAGAGCGGGACCTGCTTATGAAAACAG-CAGAT 156
                      ******************** ****************** ************** *****

consensus_8495#0      TATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTG-CCA 332
consensus_8495#2      TATTATTATTATTATTATTATTATTATTGATATTATTATTAATGTTATTATTATTGGCCA 357
consensus_8495#1      TATTATTATTATTATTATTATTATT--TGATATTATTATGAATGTTATTATTATTA-CCA 213
                      *************************  ************ ***************  ***

consensus_8495#0      TTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACAC-GATTGCCAGCACGC 391
consensus_8495#2      TTATTATTATTAATAATAATAATACTAATCAGTATGAATTAACAC-GATTGCCAGCACGC 416
consensus_8495#1      TTATTATTATTAATAATAATAATACTAATCACTATGAATTAACACTGATTTGCCANGCAC 273
                      ******************************* ************* ****  *    * *

consensus_8495#0      TG----GCAAAA-GCGTATCGGCGC---CAGCTG-GACA-GAGC-GCCAGCAAAAA---- 436
consensus_8495#2      TG----GCAAAA-GCGTATCGGCGC---CAGCTG-GACA-GAGC-GCCAGCAAAAA---- 461
consensus_8495#1      TGCTGTGCAAAATGCGTATCTGNGCTGCCAGCTGTGACATGAGCTGCCAGCAAAAAACTG 333
                      **    ****** ******* * **   ****** **** **** ***********    

consensus_8495#0      CGGTTCTTTGCTAGC----GCTACC------GTACACGCGCGTGGTG--GG-ATGA-TG- 481
consensus_8495#2      CGGTTCTTTGCTAGNC---GCTACC------GTACACGCGCGTGGTG--GGGATGACTG- 509
consensus_8495#1      TGTTTCCTTTTTTGCTTATGCTGCTTAACCTGTAAACAAACCTGCTGCTGTTGTGGTTGT 393
                       * *** **  * *     *** *       *** **   * ** **  *   **  ** 

consensus_8495#0      GTAA----CGCCAGACCCCACCCCGCCCCCCCTCCCCCCGCCCT-ACCCCCTCTGCCTGT 536
consensus_8495#2      GTAAACGGCCCCAGAAACCCCCAAACACAGACACAAANCACAC--ANCACACCAACACAC 567
consensus_8495#1      GTGACTTGAATTGTGGTTAAACTTGCCCATGAACCCCCCAAACACACCAAATTTACACAN 453
                      ** *                 *   * *     *    *   *  * *       *    

consensus_8495#0      TGGCAGAACGGGCGAAGAAGATGAGGATAAAAAAATGCGACGAACAACAGAAGGGTAAAG 596
consensus_8495#2      AAACAACACAAACAAAACAACAACACAAAAAAAAAAAAACAAAACAACAAAACAACA--- 624
consensus_8495#1      TAACC-TTTGTTCNTCAGACATAGACANCCANACNAACNANACACCCCAAAAAANCNCAG 512
                         *        *     *       *   * *          **  ** **        

consensus_8495#0      GCTCCGTGTGCTGCCTGCTCGTACGAGATTAATCGCCTGCTTAGCGAGAGACGAGCTTGA 656
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      TAACTAGAANACAACAAACGNGANGAAGGCAGAAANACNNAAAGANANANANAACCCCGA 572
                                                                                  

consensus_8495#0      AGTACGGATTCACACCCACACGCACGCACGCACCACGCACACACACACATTGAGCGCATC 716
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      NCNACACAANCAAAANAAACAAAACANAAGACAAANGCACAAAGGGACANCAAACACACA 632
                                                                                  

consensus_8495#0      GAACGGAAGCGAACGGAAACTACCACTAAGCTCACCACCTTGCGCCTGAATGGTAGGCAC 776
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      AAACANAA-CAACACAACAGNANCACGGAAAAAACAACAACACAAAAGAAACNAAAANAA 691
                                                                                  

consensus_8495#0      ACGGGTTGTACAGCGCCTGCCTGGTAGGCACAGTGCGGCGC--CATCCGGG--GAACCTT 832
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      TAAAAGAAAAGAAAAGCAAANCAGAGGACAAAANATNNCNAAACAACAGGACCAAAAGAN 751
                                                                                  

consensus_8495#0      TCGCTCAGCCAGCTTAACATTACTCGACATTATTTCTATGCTCCCCCTCTCCCCATCCCC 892
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      GGGGANGGNGAGCAATGGAANAACANAGGGGAACNCGCCAANCTNGGCANAAGAAGACGC 811
                                                                                  

consensus_8495#0      GTTGCCCCCTCCTCCCCGGGGGTCGGGTTGGTGCGGTGTGATGTGACGTGTGTG-TCTGT 951
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      AANAACACATAAACCNACACAATAAANACATAANNCTTAAATATCCNNCATAAAANCCAA 871
                                                                                  

consensus_8495#0      GTGCGGGTGCGTGTGCGCGAAAAGAGTG-TGCGGTGTGCAGCGA-GAAGCGCCACGATGG 1009
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      AANCAAATACACAANTAAAAAAAAAATAATAACATNTTAAACAAANAAANANAACAATCA 931
                                                                                  

consensus_8495#0      TGGCGAACAAGTCGGTGAAGAAGAAGAATAAGAAGAAGAAGAAGAAG-ACGCAGAGCAAG 1068
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      CTACATAAACCACCATTNCCCATCACCACACCACTTCATAAACNANCTACCTAANNCTNA 991
                                                                                  

consensus_8495#0      AAGGAAAAGAAGAGGAAGAAGAA--GAAACACTTGAACTAAAAAATAAAGACGTTGTTAA 1126
consensus_8495#2      ------------------------------------------------------------
consensus_8495#1      NACCTATCNTACATACCNTAAAACCNANCTACTAACACTCNAATCTAANACAATCANTAA 1051
                                                                                  

consensus_8495#0      GATTATGAAATGTTTTA------------------------------ 1143
consensus_8495#2      -----------------------------------------------
consensus_8495#1      -ATANTAAAANAACATAAATCCCATTTCACACAGAACATCTCAAACC 1097
                                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)