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Anopheles gambiae
cluster # 8508 cluster # 8508       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8508#0 length = 1064 sequences # 6  
consensus_8508#1 length = 776 sequences # 2  
consensus_8508#2 length = 509 sequences # 1  
consensus_8508#3 length = 406 sequences # 1  

consensusID : consensus_8508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1064
fasta sequence
                              [CCGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGATACCGCTCTCTCTTTCTCTCTCTTTCTATATATATGGTAGTGGGACAGCGCAGTGTAATCGACAAGCAGGTCGTCCTGTCCCTTTGTCCGACTGTTTTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGATCTGTGCGTGTGTAGTAATTCTCTCTCTCTCTCTC--TCTCCATTTCCACAACATCACATCACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCATCCGCCGGCCTTGGAACAGGGTCCCCCTGATCGTTCTGATCCTTCCTTGTGATCTTCCCATGTTGCCTGAACCATCGTTCCTGCGCTCTCTATCTCTCACTCTCTCTCTCTCTCACACACACACACACTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCGTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACGTGGACTCACGCGAATTTCCTCTCTC-CTCTCTCTCTCACACACACACACACACATGCACACAAACGCACGGACAAACAGCTCACTCTTTTGCCTTTGCCGCCGTCAGATGCTGATATTAACTCGCTATCTATACGTTGCCGTTTTTGCCTTTCTCGTAGAATTAACGCCGTGATCGTCGTGACTTGCTGTGTGTGTGTATGTGTGTGTTCGGTTTTTTCTTTCTCTCTCTCTCTCTCCCTCTCTCTT------TTTCTGCTTGCTTCACCTAGTAAACGCTAAACCAACAATATTATTAACTTATCAACACACCGTACATGTTCCGCGCACTTCGAGTGCCGGGTCGTCCGGGGTTTGCCCCATCTAAACCCGGGGTGGGAGGCAGACAATGAAAAGAGGAGCCAATCACTCCCACCACACAACACCTCCCCCCCGCTTTCTCCCCATCGTTTTGCCAGGCGCTCTAGTTCGTCCTTCGGACGTCGGTTAGGTGGTTTGTATCGGTC]

[+] EMBL BM636210             [CCGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGATACCGCTCTCTCTTTCTCTCTCTTTCTATATATATGGTAGTGGGACAGCGCAGTGTAATCGACAAGCAGGTCGTCCTGTCCCTTTGTCCGACTGTTTTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGATCTGTGCGTGTGTAGTAATTCTCTCTCTCTCTCTC  TCTCCATTTCCACAACATCACATCACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCATCCGCAGGCCTTGGAACAGGGTCCCCCTGATCGTTCTGATCCTTCCTTGTGATCTTCCCATGTTGCCTGAACCATCGTTCCTGCGCTCTCTATCTCTCACTCTCTCTCTCTCTCACACACACACACACTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCGTGCTCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCTCACGTGGACTCACGCGAATTTCCTCTCTCTCTCTCTCTCTCTCACACACACACACACATGCACACAAACGCACGGACAAACAGCTCACTCTTTTGCCTTTGCCGCCGTCAGATGCTGATATTAACTCGCTATCTATACGTTGCCGTTTT                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BM610426             [                           CTCTCTGTAT AGCTCGCTCTCTCTTTCTCTCTCTTTCTATATATATGGTAGTGGGACAGCGCAGTGTAATCGACAAGCAGGTCGTCCTGTCCCTTTGTCCGACTGTTTTACATTCTACATCCTATCACGTGGCCAATGACGTGCGACCGATCTGTGCGTGTGTAGTAACTCTCTCTCTCTCTCTCTTTCTCCATTTCCACAACATCACATCACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCATCCGCCGGCCTTGGAACAGGGTCCCCCTGATCGTTCTGATCCTTCCTTGTGATCTTCCCATGTTGCCTGAACCATCGTTCCTGCGCTCTCTATCTCTCACTCTCTCTCTCT    CACACACACACACTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCGTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACCTGGACTCACGCGAATT       TC CTCTCTCTCTCACACACACACACACACATGCACACAAACGCACGGACAAACAGCTCACTCTTTTGCCgg                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BM594137             [                                                                                                                                                                                                                                                                 GTTCACTGTTTTCCATCCAATTC   CCGCCGGCCTTGGAACAGGGTCCCCTTGATCTTTCTGATCCTTCCTTGTAATTTTCCCATTCTGCCTGAACCATCGTTCCCGCGCTCTC  TCTATCTCTCTCTCTATCTCTCTCACACACACACTCTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGATGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACGTGGACTCACGCGAATTTCCTCTCTC CTCACACACACACACACACACATGCACATGCACACAAACGCACGGACAAACAGCTCACTCTTTTGCCTTTGCCGCCGTCAGATGCTGATATTAACTCGCTATCTATACGTTGCCGTTTTTGCCTTTCTCGTAGAATTAACGCCGTGATCGTCGTGACTTGCTGTGTGTGTGTATGTGTGTGTTCGTTTTTTTCTTTCTCTCTCTCTCTCTCCTTCTCTCTTTCTCTCTTTCTGTTTGCTTCACCTAGTAAACGCTAAACCAACAATATTATTAACTTATCAACACACCGTACATGTTCCGCGCACTTCGAGTGCCGGGTCGTCCGG                                                                                                                                                           ]
[+] EMBL BM581681             [                                                                                                                                                                                                                                                                                                                                                                            cCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCGTGCTCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCTCACGTGGACTCACGCGAATTTCCTCTCTCTCTCTCTCTCTCTCACACACACACACACATGCACACAAACGCACGGACAAACAGCTCACTCTTTTGCCTTTGCCGCCGTCAGATGCTGATATTAACTCGCTATCTATACGTTGCCGTTTTTGCCTTTCTCCTAGAATTAACGCCGTGATCGTCGTGACTTGCTGTGTGTGTGTATGTGTGTGTTCGGTTTTTTCTTTCTCTCTTTCTCTCTCCCTCTCTCTT      TTTCTGCTTGCTTCACCTAGTAAACGCTAAACCAACAATATTATTAACTTATCAACACACCGTACATGTTCCGCGCACTTCGAGTGCCGGTTCGTC                                                                                                                                                              ]
[-] EMBL BM648288             [                                                                                                                                                                                                                                                                                                                                                                                                                         CTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTCACGCGAATTTCCTCTCTC     CTCACACACACACACACATGCACATGCACACAAACGCACGGACAAACATCTCACTCTTTTGCCTTTGCCGCCGTCAGATGCTGATATTAACTCGCTATCTATACGTTGCCGTTTTTGCCTTTCTCGTAGAATTTCCGCCGTGATCGTCGTGACTTGCTGTGTGTGTGTATGTGTGTGTTCGGTTTTTTCTTTCTCTCTCTCTCTCCCTCTCTCTCTT      TTCCTGCTTGCTTCACCTAGTAAACGCTAAACCAACAATATTATTAACTTATCAACACACCGTACATGTTCCGCGCACTTCGAGTGCCGGGTCGTCGTCGGTTTGCCCCATCTAAACCCGGGGTGGGAGGCAGACAATGAAAAGAGGAGCCAATCACTCCCACCACACAACACCTCCCCCCCGCTTTCTCCCCATCGTTTTGCCAGGCGCTCTAGTTCGTCCTTCGGACGTCGGTTAGGTGGTTTGTATCGG  ]
[+] EMBL AGA282871            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTTTGCCCCATCTAAACCCGGGGTGGGAGGCAGACAATGAAAAGAGGAGCCAATCACTCCCACCACACAACACCTCCCCCCCGCTTTCTCCCCATCGTTTTGCCAGGCGCTCTAGTTCGTCCTTCGGACGTCGGTTAGGTGGTTTGTATCattc]


>consensus_8508#0 CCGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGATACCGCTCTCTCTTTCTCTCT CTTTCTATATATATGGTAGTGGGACAGCGCAGTGTAATCGACAAGCAGGTCGTCCTGTCC CTTTGTCCGACTGTTTTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGATC TGTGCGTGTGTAGTAATTCTCTCTCTCTCTCTCTCTCCATTTCCACAACATCACATCACG GTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCATCCGCCGGCCTTGGAACAGG GTCCCCCTGATCGTTCTGATCCTTCCTTGTGATCTTCCCATGTTGCCTGAACCATCGTTC CTGCGCTCTCTATCTCTCACTCTCTCTCTCTCTCACACACACACACACTGCTATTTCGCC GGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATAC ACGCAAACTGACTGTGTGCGCGCGCGTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCC GATCTCTCCTGTAGCGCGCACACGTGGACTCACGCGAATTTCCTCTCTCCTCTCTCTCTC ACACACACACACACACATGCACACAAACGCACGGACAAACAGCTCACTCTTTTGCCTTTG CCGCCGTCAGATGCTGATATTAACTCGCTATCTATACGTTGCCGTTTTTGCCTTTCTCGT AGAATTAACGCCGTGATCGTCGTGACTTGCTGTGTGTGTGTATGTGTGTGTTCGGTTTTT TCTTTCTCTCTCTCTCTCTCCCTCTCTCTTTTTCTGCTTGCTTCACCTAGTAAACGCTAA ACCAACAATATTATTAACTTATCAACACACCGTACATGTTCCGCGCACTTCGAGTGCCGG GTCGTCCGGGGTTTGCCCCATCTAAACCCGGGGTGGGAGGCAGACAATGAAAAGAGGAGC CAATCACTCCCACCACACAACACCTCCCCCCCGCTTTCTCCCCATCGTTTTGCCAGGCGC TCTAGTTCGTCCTTCGGACGTCGGTTAGGTGGTTTGTATCGGTC



consensusID : consensus_8508#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 776
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGAGAAAATATGCGGAACGAAGATGCGAAGATTAATACAGGAGCGGGAATTTGCCAACTGTATCCCCCTTCCCCCGTCCGACCGACTGTAGCACACAAAACGGCACACTAAAACGATGTCTTCGAGACATGCGCTTCGTGTGCTCTATCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATAACTCGCTCTCTCTATCTCTCTCTTTCTATATATATGGTAGTGGGACAGCGCAATGTAATCGACAAGCAGGTCGTCCTGTCCCTTTGTCCGACTGTGTTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGATCTGTGCGTGTGTAGTAACTCTCTCTCTCTCACTCTCTCTCAAGCTCTCCATTTCCACAACATCACAAAACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCACCGGCCTTGGAACAGGGTCTCCCTGATCGTTCTGATCCTTCCTTGTAATCTTCCCATTTTGCCTGAACCATCGTTCCCGCGCTCTCTC------TCTCTCACACACATACACTCTGCTATTTCGCCGGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTCACGCGAATTTCCTCTCTCCTCACACACACACAC]

[+] EMBL BM593671             [CCGCGGACGCGTGGGCGGACGCGTGGGAGAAAATATGCGGAACGAAGATGCGAAGATTAATACAGGAGCGGGAATTTGCCAACTGTATCCCCCTTCCCCCGTCCGACCGACTGTAGCACACAAAACGGCACACTAAAACGATGTCTTCGAGACATGCGCTTCGTGTGCTCTATCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATAACTCGCTCTCTCTATCTCTCTCTTTCTATATATATGGTAGTGGGACAGCGCAATGTAATCGACAAGCAGGTCGTCCTGTCCCTTTGTCCGACTGTGTTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGATCTGTGCGTGTGTAGTAACTCTCTCTCTCTCACTCTCTCTCAAGCTCTCCATTTCCACAACATCACAAAACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCACCGGCCTTGGAACAGGGTCTCCCTGATCGTTCTGATCCTTCCTTGTAATCTTCCCATTTTGCCTGAACCATCGTTCCCGCGCTCTCTC      TCTCTCACACACATACACTCTGCTATTTCGCCGGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGG                                                                                                                                    ]
[+] EMBL AGA281738            [                                                                                                                                                                                                                                                                                                                            TTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGATCTGTGCGTGTGTAGTAACTCTCTCTCTCTCACTCTCTCTCAAGCTCTCCATTTCCACAACATCACAAAACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCACCGGCCTTGGAACAGGGTCTCCCTGATCGTTCTGATCCTTCCTTGTAATCTTCCCATTTTGCCTGAACCATCGTTCCCGCGCTCTCTCTCTCTTTCTCTCACACACATACACTCTGCTATTTCGCC GGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTCACGCGAATTTCCTCTCTCCTCACACACACACAC]


>consensus_8508#1 CCGCGGACGCGTGGGCGGACGCGTGGGAGAAAATATGCGGAACGAAGATGCGAAGATTAA TACAGGAGCGGGAATTTGCCAACTGTATCCCCCTTCCCCCGTCCGACCGACTGTAGCACA CAAAACGGCACACTAAAACGATGTCTTCGAGACATGCGCTTCGTGTGCTCTATCCCTTTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATAACTCGCTCTCTCTATCTCTC TCTTTCTATATATATGGTAGTGGGACAGCGCAATGTAATCGACAAGCAGGTCGTCCTGTC CCTTTGTCCGACTGTGTTACATCCTACATCCTATCACGTGGCCAATGACGTGCGACCGAT CTGTGCGTGTGTAGTAACTCTCTCTCTCTCACTCTCTCTCAAGCTCTCCATTTCCACAAC ATCACAAAACGGTCACCAACAGTATCGTTCACTGTTTTCCATCCAATTCCACCGGCCTTG GAACAGGGTCTCCCTGATCGTTCTGATCCTTCCTTGTAATCTTCCCATTTTGCCTGAACC ATCGTTCCCGCGCTCTCTCTCTCTCACACACATACACTCTGCTATTTCGCCGGGTGATAA GGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAAC TGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTC CTGTAGCTCGCACACGTGGACTCACGCGAATTTCCTCTCTCCTCACACACACACAC



consensusID : consensus_8508#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 509
fasta sequence
                              [ATCCTGACATCCTATCACGTGNCCAAATGACGTGCGGACCCGATCTGTGCGTGTGTAGTAACGTCAACTGCTCTCGTCNCTCTCCATTGTCCACAACATCACAAAACGGTCACCAACAGTATCGTGCACTGTGTNTTCCATCCAATTCCGGCCGGCCTTGGAACAGGGTCCCCTTGATCTTTCTGATNCCTTGCCTNTTGGGAATNTTGGCCCANTCTGCCTGAACCATCGNTCCCGCGCTCTCTCTATCTCTCTCTCTATCTCTCTCAACACACACACTCTGTATTTCCCGTGATAAGTAAACTTAACAAAACACGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACGTGGACTCACGCGATTTCCTCTCTCCTCAACACACAACAACAGATGACATGCACACAAACATAACCGGGAATTCTGCT]

[-] EMBL AL695842             [ATCCTGACATCCTATCACGTGNCCAAATGACGTGCGGACCCGATCTGTGCGTGTGTAGTAACGTCAACTGCTCTCGTCNCTCTCCATTGTCCACAACATCACAAAACGGTCACCAACAGTATCGTGCACTGTGTNTTCCATCCAATTCCGGCCGGCCTTGGAACAGGGTCCCCTTGATCTTTCTGATNCCTTGCCTNTTGGGAATNTTGGCCCANTCTGCCTGAACCATCGNTCCCGCGCTCTCTCTATCTCTCTCTCTATCTCTCTCAACACACACACTCTGTATTTCCCGTGATAAGTAAACTTAACAAAACACGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACGTGGACTCACGCGATTTCCTCTCTCCTCAACACACAACAACAGATGACATGCACACAAACATAACCGGGAATTCTGCT]


>consensus_8508#2 ATCCTGACATCCTATCACGTGNCCAAATGACGTGCGGACCCGATCTGTGCGTGTGTAGTA ACGTCAACTGCTCTCGTCNCTCTCCATTGTCCACAACATCACAAAACGGTCACCAACAGT ATCGTGCACTGTGTNTTCCATCCAATTCCGGCCGGCCTTGGAACAGGGTCCCCTTGATCT TTCTGATNCCTTGCCTNTTGGGAATNTTGGCCCANTCTGCCTGAACCATCGNTCCCGCGC TCTCTCTATCTCTCTCTCTATCTCTCTCAACACACACACTCTGTATTTCCCGTGATAAGT AAACTTAACAAAACACGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGAC TGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGT AGCGCGCACACGTGGACTCACGCGATTTCCTCTCTCCTCAACACACAACAACAGATGACA TGCACACAAACATAACCGGGAATTCTGCT



consensusID : consensus_8508#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 406
fasta sequence
                              [ACACACACAAAAATGCACTTGTTTGTCTATCGGGAGAGTTTTTCTGTCTTTTCTTTTCGTTCGCTTGTGTATTCTGCCCACCCCTTTCTGCTTTGGGGTGTTATCAGCGCTTTTGCACCTTTTTGCACATTTGCTCAGCTTGTCTTTTCTTTTGCTTTTGCTGTCACTTCGATTTTTCTTCTTTTTTTCGGTGCACACACACACACATACACTCTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTCACGCGAATTTCCATCCAATTCCACCGGCC]

[-] EMBL BX614903             [ACACACACAAAAATGCACTTGTTTGTCTATCGGGAGAGTTTTTCTGTCTTTTCTTTTCGTTCGCTTGTGTATTCTGCCCACCCCTTTCTGCTTTGGGGTGTTATCAGCGCTTTTGCACCTTTTTGCACATTTGCTCAGCTTGTCTTTTCTTTTGCTTTTGCTGTCACTTCGATTTTTCTTCTTTTTTTCGGTGCACACACACACACATACACTCTGCTATTTCGCCGGTGATAAGGTAAACTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTCACGCGAATTTCCATCCAATTCCACCGGCC]


>consensus_8508#3 ACACACACAAAAATGCACTTGTTTGTCTATCGGGAGAGTTTTTCTGTCTTTTCTTTTCGT TCGCTTGTGTATTCTGCCCACCCCTTTCTGCTTTGGGGTGTTATCAGCGCTTTTGCACCT TTTTGCACATTTGCTCAGCTTGTCTTTTCTTTTGCTTTTGCTGTCACTTCGATTTTTCTT CTTTTTTTCGGTGCACACACACACACATACACTCTGCTATTTCGCCGGTGATAAGGTAAA CTTAACAAAACGCTGTACTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTG TGTGCGCGCGCCTGCGCCCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAG CTCGCACACGTGGACTCACGCGAATTTCCATCCAATTCCACCGGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8508#0      ------------------------------------------------------------
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      CCGCGGACGCGTGGGCGGACGCGTGGGAGAAAATATGCGGAACGAAGATGCGAAGATTAA 60
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      ------------------------------------------------------------
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      TACAGGAGCGGGAATTTGCCAACTGTATCCCCCTTCCCCCGTCCGACCGACTGTAGCACA 120
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      ------------------------------------------------------------
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      CAAAACGGCACACTAAAACGATGTCTTCGAGACATGCGCTTCGTGTGCTCTATCCCTTTC 180
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      --CCGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGATACCGCTCTCTCTTTCTCT 58
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATAAC-TCGCTCTCTCTATCTCT 239
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      CTCTTTCTATATATATGGTAGTGGGACAGCGCAGTGTAATCGACAAGCAGGTCGTCCTGT 118
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      CTCTTTCTATATATATGGTAGTGGGACAGCGCAATGTAATCGACAAGCAGGTCGTCCTGT 299
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      CCCTTTGTCCGACTGTTTTACATCCT-ACATCCTATCACGTGGCCAA-TGACGTGCGA-- 174
consensus_8508#2      ---------------------ATCCTGACATCCTATCACGTGNCCAAATGACGTGCGGAC 39
consensus_8508#1      CCCTTTGTCCGACTGTGTTACATCCT-ACATCCTATCACGTGGCCAA-TGACGTGCGA-- 355
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      CCGATCTGTGCGTGTGTAGTAATTCTCTCT------CTCTC-TCT---CTCTCCATT-TC 223
consensus_8508#2      CCGATCTGTGCGTGTGTAGTAACGTCAACTG-----CTCTCGTCN---CTCTCCATTGTC 91
consensus_8508#1      CCGATCTGTGCGTGTGTAGTAACTCTCTCTCTCTCACTCTCTCTCAAGCTCTCCATT-TC 414
consensus_8508#3      ---------------------------------ACACACACAAAAATGCACTTGTTTGTC 27
                                                          * * *       * **   ** **

consensus_8508#0      CA-CAACATCACATCACGGTCACCAACAGTATCGTTCACT-GT--TTTCCATCCAATTCC 279
consensus_8508#2      CA-CAACATCACAAAACGGTCACCAACAGTATCGTGCACT-GTGTNTTCCATCCAATTCC 149
consensus_8508#1      CA-CAACATCACAAAACGGTCACCAACAGTATCGTTCACT-GT--TTTCCATCCAATTCC 470
consensus_8508#3      TATCGGGAGAGTTTTTCTGTCTTT--TCTTTTCGTTCGCTTGTGTATTCTGCCCACCCCT 85
                       * *   *        * ***        * **** * ** **   ***   ***   * 

consensus_8508#0      ATCCGCCGGCCTTGGAACAGGGTCCCCCTGATCGTTCTGATCCTT--CCTTGTG---ATC 334
consensus_8508#2      G---GCCGGCCTTGGAACAGGGTCCCCTTGATCTTTCTGATNCCTTGCCTNTTGGGAATN 206
consensus_8508#1      A----CCGGCCTTGGAACAGGGTCTCCCTGATCGTTCTGATCCTT--CCTTGTA---ATC 521
consensus_8508#3      T----TCTGCTTTGGGGTGTTATCAGCGCTTTTGCACCTTTTTGCACATTTGCTCAGCTT 141
                            * ** ****       **  *    *    *   *        *        * 

consensus_8508#0      TT--CCCATGTTGCCTGAACCATCGTTCCTGCGCTCTCTATCTCTCACTCTCTCTCTCTC 392
consensus_8508#2      TTGGCCCANTCTGCCTGAACCATCGNTCCCGCGCTCTCTCTATCTCTCTCTCTATCTCTC 266
consensus_8508#1      TT--CCCATTTTGCCTGAACCATCGTTCCCGCGCTCTCT----------------CTCTC 563
consensus_8508#3      GTCTTTTCTTTTGCTTTTGCTGTCACTTCGATTTTTCTTCTTTTTTTCGGTG---CACAC 198
                       *         *** *   *  **  * *     *   *                * * *

consensus_8508#0      TCACACACACACACACTGCTATTTCGCCG-GTGATAAGGTAAACTTAACAAAACGCTGTA 451
consensus_8508#2      TCA-ACACACACACTCTG-TATTTCCC---GTGATAAG-TAAACTTAACAAAACAC-GTA 319
consensus_8508#1      TCACACACATACACTCTGCTATTTCGCCGGGTGATAAGGTAAACTTAACAAAACGCTGTA 623
consensus_8508#3      ACACACACATACACTCTGCTATTTCGCCG-GTGATAAGGTAAACTTAACAAAACGCTGTA 257
                       ** ***** **** *** ****** *   ******** *************** * ***

consensus_8508#0      CTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCGTGCGC 511
consensus_8508#2      CTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGC 379
consensus_8508#1      CTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGC 683
consensus_8508#3      CTTTGTAAGGTGCGCCCACGGTTACATACACGCAAACTGACTGTGTGCGCGCGCCTGCGC 317
                      ****************************************************** *****

consensus_8508#0      CCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACGTGGACTC 571
consensus_8508#2      CCGGGAACAGATGATTCTTCTTCGAAGCCGATCTCTCCTGTAGCGCGCACACGTGGACTC 439
consensus_8508#1      CCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTC 743
consensus_8508#3      CCGGGAACAGATGATTCTTCTTTGAAGCCGATCTCTCCTGTAGCTCGCACACGTGGACTC 377
                      ********************** ********************* ***************

consensus_8508#0      ACGCGAATTTCCTCTCTCCTCTCTCTCTCACACACACACACACACATGCACACAAACGCA 631
consensus_8508#2      ACGCGA-TTTCCTCTCTCCTCAA---CACACAACAACAGATG-ACATGCACACAAACATA 494
consensus_8508#1      ACGCGAATTTCCTCTCTCCTCACACACACACAC--------------------------- 776
consensus_8508#3      ACGCGAATTTCCATCCAATTCCACCGGCC------------------------------- 406
                      ****** *****   *   **       *                               

consensus_8508#0      --CGGACAAACAGCTCACTCTTTTGCCTTTGCCGCCGTCAGATGCTGATATTAACTCGCT 689
consensus_8508#2      ACCGGGAATTCTGCT--------------------------------------------- 509
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      ATCTATACGTTGCCGTTTTTGCCTTTCTCGTAGAATTAACGCCGTGATCGTCGTGACTTG 749
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      CTGTGTGTGTGTATGTGTGTGTTCGGTTTTTTCTTTCTCTCTCTCTCTCTCCCTCTCTCT 809
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      TTTTCTGCTTGCTTCACCTAGTAAACGCTAAACCAACAATATTATTAACTTATCAACACA 869
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      CCGTACATGTTCCGCGCACTTCGAGTGCCGGGTCGTCCGGGGTTTGCCCCATCTAAACCC 929
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      GGGGTGGGAGGCAGACAATGAAAAGAGGAGCCAATCACTCCCACCACACAACACCTCCCC 989
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      CCCGCTTTCTCCCCATCGTTTTGCCAGGCGCTCTAGTTCGTCCTTCGGACGTCGGTTAGG 1049
consensus_8508#2      ------------------------------------------------------------
consensus_8508#1      ------------------------------------------------------------
consensus_8508#3      ------------------------------------------------------------
                                                                                  

consensus_8508#0      TGGTTTGTATCGGTC 1064
consensus_8508#2      ---------------
consensus_8508#1      ---------------
consensus_8508#3      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)