cluster # 8526

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Anopheles gambiae
cluster # 8526 cluster # 8526 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8526#0 length = 1457 sequences # 8
consensus_8526#1 length = 706 sequences # 1

consensus_8526#2 length = 505 sequences # 1
consensus_8526#3 length = 149 sequences # 1

consensusID : consensus_8526#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1457
fasta sequence

                              [CCGGACTGTCTAGCGCGAGCGGCGCCCTTTTTTTTTTTTTGCTATTCCCTACCGCGTGCTCGTCCGGTGCTAAAACTTCACCTTAACCGTCGTACTACTTATATTCGTTTCGTATTAATGCTTATGCTTTAATCTGGGTTTTTTTTGTTTTGCTTTGCGCTTCTAGCTTGGTTTTTTGCTCGCAAACTCGGCCCCCACGGTCGGGGTTTTTTTTCTTCTTTATATTGGATTTATTATAATGTGTGTGTGTGTTTGTGTGTGTGTGGGGATGGTGTTGTTGTAATTGTTGCATCGTTACTAAATCGCTCATGCTCTCTCTCTCTATGTAGTGGCGGCGTTCGCACAATCTTTCTCCCTTCATCCGACCAGGCTCCAGGTGGTTCGTGGAGTGTTATTGTGTGTGTGTGTGTGTGTTGTGTTTCTGGGATTGCACATAATGCGTATGTGTGTGTATGGTTGTTTAGGTATAGAGTATGCATGTGTTTCCGTGTGCGTGTATTGTGTACGTGTCTGTGTGTTTGTTTGTGTGTGTGTGTGTGTGCAGGGGGC-GGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTGAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCTTGCGGAGACCGAACAGCTTCAGCGGCAGGAATCCGTTCTCAGCCATGATGACGAAGTACACGAAGAAACCGGCCGCAGCGTGAATCCGGCCGATCTGACCGTAAGCCTATCGAGATAAGTCTGCAGATGCGAGGAGGCAGAGGCGGCAGCGTTGTTGGGAGGAAGATAGATATTGTGTCACACGACAAGGGTGGGAAGAAGTACAGGAAGGGAGGAGAAATGGGAGGATAATGTTAAATCATTATTAACGATATGATCTTTACTCTTGCACGATCAATTAGTGTTTATGTATACGGATGAGTTATACGGTTATACGGTTACTACTAATGTTAGTGATCAAATGTAACGACAAGTTTACACCCCCGAATACTCAACGTGTAGGCGACGCTCTTCAAGTGCAGTTGAAGATGGAATGTTAGTGTTAACCTCGGGGCGAT]

[+] EMBL BM604076             [CCGGACTGTCTAGCGCGAGCGGCGCCCTTTTTTTTTTTTTGCTATTCCCTACCGCGTGCTCGTCCGGTGCTAAAACTTCACCTTAACCGTCGTACTACTTATATTCGTTTCGTATTAATGCTTATGCTTTAATCTGGGTTTTTTTTGTTTTGCTTTGCGCTTCTAGCTTGGTTTTTTGCTCGCAAACTCGGCCCCCACGGTCGGGGTTTTTTTTCTTCTTTATATTGGATTTATTATAATGTGTGTGTGTGTTTGTGTGTGTGTGGGGATGGTGTTGTTGTAATTGTTGCATCGTTACTAAATCGCTCATGCTCTCTCTCTCTATGTAGTGGCGGCGTTCGCACAATCTTTCTCCCTTCATCCGACCAGGCTCCAGGTGGTTCGTGGAGTGTTATTGTGTGTGTGTGTGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM579057             [                                                                                                                                                                                                                                                                                                                                              GCGTTCGCACAATCTTTCTCCCTTCATCCGACCAGGCTCCAGGTGGTTCGTGGAGTGTTATTGTGTGTGTGTGTGTGGTTTGTGTTTCTGGGATTGCACATAATGCGTATGTGTGTGTATGGTTGTTTAGGTATAGAGTATGCATGTGTTTCCGTGTGCGTGTATTGTGTACGTGTCTGTGTGTTTGTTTGTGTGTGTGTGTGTGTGCAGGGGGC GGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTAAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM649435             [                                                                                                                                                                                                                                                                                                                                                                                 GCTCCAGGTGGTTCGTGGAGTGTTATTGTGTGTGTGTGTG GT TTGTGTTTCTGGGATTGCACATAATGCGTATGTGTGTGTATGGTTGTTTATGTATAGAGTATGCATGTGTTTCCGTGTGCGTGTATTGTGTACGTGTCTGTGTGTTTGTT  TGTGTGTGTGTGTGTGCAGGGGGC GGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTGAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCTTGCGGAGACgg                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BM576436             [                                                                                                                                                                                                                                                                                                                                                                                                                                    TCTGGGATTGCACATAATGCGTATGTGTGTGTATGGTTGTTTAGGTATAGAGTATGCATGTGTTTCCGTGTGCGTGTATTGTGTACGTGTCTGTGTGTTTGTTTGTGTGTGTGTGTGTGTGCAGGGGGC GGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTAAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCgg                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BM624777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              atGTATAGAGTATGCATGTGTTTCCGTGTGCGTGTATAGTGTACGTGTCTGTGTGTT      TGTGTGTGTGTGTGTGCAGGGGGC GGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCAAAGTTGAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCTTGCGGAGACCGAACAGCTTCAGCGGCAGGAATCCGcgg                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BM641948             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCGGGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTGAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCTTGCGGAGACCGAACAGCTTCAGCGGCAGGAATCCGTTCTCAGCCATGATGACGAAGTACACGAAGAAACCGGCCGCAGCGTGAATCCGG                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BX609661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTTAATTAATCTTTTTAAATATAAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCACGCCCGGCGTGTAGGACAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTGAGGGCCCAGTTTCTCATGCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGACGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCTTGCGGAGACCGAACAGCTTCAGCGGCAGGAATCCGTTCTCAGCCATGATGACGAAGTACACGAA                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AL697025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTTCTTGCGATCGCGGTAGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCTTGCGGAGACCGAACAGCTTCAGCGGCAGGAATCCGTTCTCAGCCATGATGACGAAGTACACGAAGAAACCGTCCGCAGCCTGAATCATACCGATCTGACCGTAAGCCTATCGAGATAAGTCTGCAGATGCGAGGAGGCAGAGGCGGCAGCGTTGTTGGGAGGAAGATAGATATTGTGTCACACGACAAGGGTGGGAAGAAGTACAGGAAGGGAGGAGAAATGGGAGGATAATGTTAAATCATTATTAACGATATGATCTTTACTCTTGCACGATCAATTAGTGTTTATGTATACGGATGAGTTATACGGTTATACGGTTACTACTAATGTTAGTGATCAAATGTAACGACAAGTTTACACCCCCGAATACTCAACGTGTAGGCGACGCTCTTCAAGTGCAGTTGAAGATGGAATGTTAGTGTTAACCTCGGGGCGAT]




>consensus_8526#0
CCGGACTGTCTAGCGCGAGCGGCGCCCTTTTTTTTTTTTTGCTATTCCCTACCGCGTGCT
CGTCCGGTGCTAAAACTTCACCTTAACCGTCGTACTACTTATATTCGTTTCGTATTAATG
CTTATGCTTTAATCTGGGTTTTTTTTGTTTTGCTTTGCGCTTCTAGCTTGGTTTTTTGCT
CGCAAACTCGGCCCCCACGGTCGGGGTTTTTTTTCTTCTTTATATTGGATTTATTATAAT
GTGTGTGTGTGTTTGTGTGTGTGTGGGGATGGTGTTGTTGTAATTGTTGCATCGTTACTA
AATCGCTCATGCTCTCTCTCTCTATGTAGTGGCGGCGTTCGCACAATCTTTCTCCCTTCA
TCCGACCAGGCTCCAGGTGGTTCGTGGAGTGTTATTGTGTGTGTGTGTGTGTGTTGTGTT
TCTGGGATTGCACATAATGCGTATGTGTGTGTATGGTTGTTTAGGTATAGAGTATGCATG
TGTTTCCGTGTGCGTGTATTGTGTACGTGTCTGTGTGTTTGTTTGTGTGTGTGTGTGTGT
GCAGGGGGCGGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAATTAATCTTTTTAAATATAA
ATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAAGT
AGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAGCC
ACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGACA
GGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTGAGGGCCCAGTTTCTCATGC
CCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAGATGATCAAATCGGCCCACTGTACGA
CGACGATCGACACGAAGAACGCGGTGTGGCAGGTGAACTCGAGGGTCTTGCGATCGCGGT
AGGTCCATTCCTGACCGTACGAGTCGGTGAGATCGTTGATGGCTTTCGAGTCCCAGCTCT
TGCGGAGACCGAACAGCTTCAGCGGCAGGAATCCGTTCTCAGCCATGATGACGAAGTACA
CGAAGAAACCGGCCGCAGCGTGAATCCGGCCGATCTGACCGTAAGCCTATCGAGATAAGT
CTGCAGATGCGAGGAGGCAGAGGCGGCAGCGTTGTTGGGAGGAAGATAGATATTGTGTCA
CACGACAAGGGTGGGAAGAAGTACAGGAAGGGAGGAGAAATGGGAGGATAATGTTAAATC
ATTATTAACGATATGATCTTTACTCTTGCACGATCAATTAGTGTTTATGTATACGGATGA
GTTATACGGTTATACGGTTACTACTAATGTTAGTGATCAAATGTAACGACAAGTTTACAC
CCCCGAATACTCAACGTGTAGGCGACGCTCTTCAAGTGCAGTTGAAGATGGAATGTTAGT
GTTAACCTCGGGGCGAT

consensusID : consensus_8526#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence

                              [GCAACGAATCGGCACGAGGAGTTGATATACCGCTCCGTCTCAACANGGTTAATGCCACTGCATGTCTAAGCTACAAGCTTCCTAGAAAAGTGAAACCGNCATAAGTGCTCAGGTATAAGCAGCTATAATTTACAATGATCCTCATCCAAGACAGTTACTTGAGATAACTGTGGAAAAGCCAGAGCTAATACATGCAGTTATGCCGGGACTGTTGGGCCTCCGGGTCGGACGGAACTTAGGGTTGCACTATATTTAGGTTAAAACCAATTCGCCTCCGGAGCGTCTATTGACGTTGCAAATCTGGATAAGGATGCCGACTCGTACGGTCGCTTGCGACGTGACGACAGATCTTTCANAGATGTCTGNCCTATCAACTATTGATGGTAGTGTANNGAGGACTACCATGGTTGCGACGGGTAACGAGTGCGAATCAGGGTATACGATTACCGGCAGAGGGAGCCTGAGAAATGGCTACCACGAGTCCAAGGGAAGGCAGCAGGCGCGTANATATTACCCAATCCCGGCACGGAGGCAGTGTAGTGACGCAGNAAATANCAATATGGACCTCTCTAACGATCGTCCATAATTGGAATGAGTTGAGCATAAATCCTTTTGCAAGGATCAAGTGGAGGGCAAGTCTGGTGCCAGANAGCCGCGGTAATTCCAGCTCCACTAGCGTATATGAGAGTAGTNNNCGGATTAAAGC]

[+] EMBL BX467405             [GCAACGAATCGGCACGAGGAGTTGATATACCGCTCCGTCTCAACANGGTTAATGCCACTGCATGTCTAAGCTACAAGCTTCCTAGAAAAGTGAAACCGNCATAAGTGCTCAGGTATAAGCAGCTATAATTTACAATGATCCTCATCCAAGACAGTTACTTGAGATAACTGTGGAAAAGCCAGAGCTAATACATGCAGTTATGCCGGGACTGTTGGGCCTCCGGGTCGGACGGAACTTAGGGTTGCACTATATTTAGGTTAAAACCAATTCGCCTCCGGAGCGTCTATTGACGTTGCAAATCTGGATAAGGATGCCGACTCGTACGGTCGCTTGCGACGTGACGACAGATCTTTCANAGATGTCTGNCCTATCAACTATTGATGGTAGTGTANNGAGGACTACCATGGTTGCGACGGGTAACGAGTGCGAATCAGGGTATACGATTACCGGCAGAGGGAGCCTGAGAAATGGCTACCACGAGTCCAAGGGAAGGCAGCAGGCGCGTANATATTACCCAATCCCGGCACGGAGGCAGTGTAGTGACGCAGNAAATANCAATATGGACCTCTCTAACGATCGTCCATAATTGGAATGAGTTGAGCATAAATCCTTTTGCAAGGATCAAGTGGAGGGCAAGTCTGGTGCCAGANAGCCGCGGTAATTCCAGCTCCACTAGCGTATATGAGAGTAGTNNNCGGATTAAAGC]




>consensus_8526#1
GCAACGAATCGGCACGAGGAGTTGATATACCGCTCCGTCTCAACANGGTTAATGCCACTG
CATGTCTAAGCTACAAGCTTCCTAGAAAAGTGAAACCGNCATAAGTGCTCAGGTATAAGC
AGCTATAATTTACAATGATCCTCATCCAAGACAGTTACTTGAGATAACTGTGGAAAAGCC
AGAGCTAATACATGCAGTTATGCCGGGACTGTTGGGCCTCCGGGTCGGACGGAACTTAGG
GTTGCACTATATTTAGGTTAAAACCAATTCGCCTCCGGAGCGTCTATTGACGTTGCAAAT
CTGGATAAGGATGCCGACTCGTACGGTCGCTTGCGACGTGACGACAGATCTTTCANAGAT
GTCTGNCCTATCAACTATTGATGGTAGTGTANNGAGGACTACCATGGTTGCGACGGGTAA
CGAGTGCGAATCAGGGTATACGATTACCGGCAGAGGGAGCCTGAGAAATGGCTACCACGA
GTCCAAGGGAAGGCAGCAGGCGCGTANATATTACCCAATCCCGGCACGGAGGCAGTGTAG
TGACGCAGNAAATANCAATATGGACCTCTCTAACGATCGTCCATAATTGGAATGAGTTGA
GCATAAATCCTTTTGCAAGGATCAAGTGGAGGGCAAGTCTGGTGCCAGANAGCCGCGGTA
ATTCCAGCTCCACTAGCGTATATGAGAGTAGTNNNCGGATTAAAGC

consensusID : consensus_8526#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence

                              [CCGCCCACGCGTCCGGTCCGGCTGCCGGTCGCTTCGCCAATCCGACCGACTGTCACAAATACTACGTCTGCTTCTGGCTGCCCTTCGGACTGTACAGTCTCGAGCAGAACTGCTTGGCCGGGTACGCGTACAATCCGTCGCTGGAACGCTGCACGGCCGACCAGAGCGTTTGCTTCCCCGGGGAGTTCACGTGCATGGGCCCGGGTCGGTTCCCCGATCCGGCCGATCCGACCTCGTACTTCTGGTGCGTGTGGAACATGTTCGGTGGCTACCTGCAGTACAAGATGCAGTGCCCGATGGGCCAGGTGTACAATGCGTTCCGCGGACGGTGTGCCTTTGCGGTGGTGGGACGTTCGCTGCCGATTGATGAGCTGGACGACGAGCTGGCGGCGGCTGAAGTTGCCGAGGAGTCGCACCCAGCGGAAGTCGATAGTGCGGTGGAGCCGGTGGAAACGGAGGTTGAGCCCGTCACCCCGGTAGCTGAGGAGCAACCTAAGCTGAAGGT]

[+] EMBL BM608586             [CCGCCCACGCGTCCGGTCCGGCTGCCGGTCGCTTCGCCAATCCGACCGACTGTCACAAATACTACGTCTGCTTCTGGCTGCCCTTCGGACTGTACAGTCTCGAGCAGAACTGCTTGGCCGGGTACGCGTACAATCCGTCGCTGGAACGCTGCACGGCCGACCAGAGCGTTTGCTTCCCCGGGGAGTTCACGTGCATGGGCCCGGGTCGGTTCCCCGATCCGGCCGATCCGACCTCGTACTTCTGGTGCGTGTGGAACATGTTCGGTGGCTACCTGCAGTACAAGATGCAGTGCCCGATGGGCCAGGTGTACAATGCGTTCCGCGGACGGTGTGCCTTTGCGGTGGTGGGACGTTCGCTGCCGATTGATGAGCTGGACGACGAGCTGGCGGCGGCTGAAGTTGCCGAGGAGTCGCACCCAGCGGAAGTCGATAGTGCGGTGGAGCCGGTGGAAACGGAGGTTGAGCCCGTCACCCCGGTAGCTGAGGAGCAACCTAAGCTGAAGGT]




>consensus_8526#2
CCGCCCACGCGTCCGGTCCGGCTGCCGGTCGCTTCGCCAATCCGACCGACTGTCACAAAT
ACTACGTCTGCTTCTGGCTGCCCTTCGGACTGTACAGTCTCGAGCAGAACTGCTTGGCCG
GGTACGCGTACAATCCGTCGCTGGAACGCTGCACGGCCGACCAGAGCGTTTGCTTCCCCG
GGGAGTTCACGTGCATGGGCCCGGGTCGGTTCCCCGATCCGGCCGATCCGACCTCGTACT
TCTGGTGCGTGTGGAACATGTTCGGTGGCTACCTGCAGTACAAGATGCAGTGCCCGATGG
GCCAGGTGTACAATGCGTTCCGCGGACGGTGTGCCTTTGCGGTGGTGGGACGTTCGCTGC
CGATTGATGAGCTGGACGACGAGCTGGCGGCGGCTGAAGTTGCCGAGGAGTCGCACCCAG
CGGAAGTCGATAGTGCGGTGGAGCCGGTGGAAACGGAGGTTGAGCCCGTCACCCCGGTAG
CTGAGGAGCAACCTAAGCTGAAGGT

consensusID : consensus_8526#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 149
fasta sequence

                              [GGTGTACGATGCGTGCGAAGCGACACAGAAGCTCGGCGTGCGGCTGAAGAACGACTTCAAGCAGGTGCTCGTTGCGATCAAGCAGCTGGTCGGATGCGGACATTACGCGCCAGCTGGCCCAGGCCACTTCGACATTGCCGGCACGGGTG]

[+] EMBL AL930191             [GGTGTACGATGCGTGCGAAGCGACACAGAAGCTCGGCGTGCGGCTGAAGAACGACTTCAAGCAGGTGCTCGTTGCGATCAAGCAGCTGGTCGGATGCGGACATTACGCGCCAGCTGGCCCAGGCCACTTCGACATTGCCGGCACGGGTG]




>consensus_8526#3
GGTGTACGATGCGTGCGAAGCGACACAGAAGCTCGGCGTGCGGCTGAAGAACGACTTCAA
GCAGGTGCTCGTTGCGATCAAGCAGCTGGTCGGATGCGGACATTACGCGCCAGCTGGCCC
AGGCCACTTCGACATTGCCGGCACGGGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8526#0      CCGGACTGTCTAGCGCGAGCGGCGCCCTTTTTTTTTTTTTGCTATTCCCTACCGCGTGCT 60
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      CGTCCGGTGCTAAAACTTCACCTTAACCGTCGTACTACTTATATTCGTTTCGTATTAATG 120
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      CTTATGCTTTAATCTGGGTTTTTTTTGTTTTGCTTTGCGCTTCTAGCTTGGTTTTTTGCT 180
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      CGCAAACTCGGCCCCCACGGTCGGGGTTTTTTTTCTTCTTTATATTGGATTTATTATAAT 240
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      GTGTGTGTGTGTTTGTGTGTGTGTGGGGATGGTGTTGTTGTAATTGTTGCATCGTTACTA 300
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      AATCGCTCATGCTCTCTCTCTCTATGTAGTGGCGGCGTTCGCACAATCTTTCTCCCTTCA 360
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      TCCGACCAGGCTCCAGGTGGTTCGTGGAGTGTTATTGTGTGTGTGTGTGTGTGTTGTGTT 420
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      TCTGGGATTGCACATAATGCGTATGTGTGTGTA-TGGTTGTTTAGGTATAGAGTATGCAT 479
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      -------------GCAACGAATCGGCACGAGGAGTTGATATACCGCTCCGTCTCAACANG 47
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      GTGTTTCCGTGTGCGTGTATTGTGTACGTGTCTGTGTGTTTGTTTGTGTGTGTGTGTGTG 539
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      GTTAATGCCACTGCATGTCTAAGCTACAAGCTTCCTAGAAAAGTGAAACCGNCATAAGTG 107
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      TGCAGGGGGCGGGGGAGTTGGTTTTTGTTGGTTTTGTTTTAAT-TAATCTTTTTAAATAT 598
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      CTCAGGTATAAGCAGCTATAATTTACAATGATCCTCATCCAAGACAGTTACTTGAGATAA 167
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      AAATTTGTTGACCTAATAGTACGTTTCTTGCTCTAGCCAGCCGCCTGGATTGCGTCTCAA 658
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      CTGTGGAAAAGCCAGAGCTAATACATGCAGTTATGCCGGGACTGTTGGGCCTCCGGGTCG 227
consensus_8526#2      ---------------------------------CCGCCCACGCGTCCGGTCCGGCTGCCG 27
                                                                                  

consensus_8526#0      GTAGAAGCGACGAATTTCGTCATACACGAAGATGGACAAGCTGAACGGTAAAGCTGGTAG 718
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      GACGGAACTTAGGGTTGCACTATATTTAGGTTAAAACCAATTCGCCTCCGGAGCGTCTAT 287
consensus_8526#2      GTCGCTTCGCCAATCCG-ACCGACTGTCACAAATACTACGTCTGCTTCTGGCTGCCCTTC 86
                                                                                  

consensus_8526#0      CCACCAAACGAATTTCAGTGGGTACATGCGCAGACCCTTGTCCATGCCCGGCGTGTAGGA 778
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      TGACGTTGCAAATCTGGATAAGGATGCCGACTCGTACGGTCGCTTGCGACGTGACGACAG 347
consensus_8526#2      GGACTGTACAGTCTCGAGCAGAACTGCTTGGCCGGGTACGCGTACAATCCGTCGCTG-GA 145
                                                                                  

consensus_8526#0      CAGGATGGCAGCCAGTACCGTTTCGAACACGAGACCGAAGTTGAGGGCCCAGTTTCTCAT 838
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ATCTTTCANAGATGTCTGNCCTATCAACTATTGATGGTAGTGTANNGAGGACTACCATGG 407
consensus_8526#2      ACGCTGCACGGCCGACCAGAGCGTTTGCTTCCCCGGGGAGTTCACGTGCATGGGCCCGGG 205
                                                                                  

consensus_8526#0      GCCCTGGTGGAAAATCGAGTTACGGCGAGTCTTACAG-ATGATCAAATCGG-CCCACTGT 896
consensus_8526#3      ---------------------------GGTGTACGAT-GCGTGCGAAGCGA-CACA--GA 29
consensus_8526#1      TTGCGACGGGTAACGAGTGCGAATCAGGGTATACGATTACCGGCAGAGGGAGCCTGAGAA 467
consensus_8526#2      TCGGTTCCCCGATCCGGCCGATCCGACCTCGTACTTCTG-GTGCGTGTGGAACATGTTCG 264
                                                     *           *     *  *       

consensus_8526#0      ACGACGACGATCGACACGAAGAACGCGGTGTGG-----CAGGTGAACTCGAGGGTCTTGC 951
consensus_8526#3      AGCTCGGCGTGCGGC-TGAAGAACGACTTCAAG-----CAGGTG--CTCG------TTGC 75
consensus_8526#1      ATGGCTACCACGAGTCCAAGGGAAGGCAGCAGG-----CGCGTANATATTACCCAATCCC 522
consensus_8526#2      GTGGCTACCTGCAGTACAAGATGCAGTGCCCGATGGGCCAGGTGTACAATGCGTTCCGCG 324
                          *  *          *                   *  **                 

consensus_8526#0      GATC--GCGGTAGGTCCATTCCTGACCGTACGA-GTCGGTGAGATCGTTGATGGCTTTCG 1008
consensus_8526#3      GATCAAGCAGCTGGTCGGATGCGGACATTACGC-GCCAGCTGGCCCA--GGCCACTTCGA 132
consensus_8526#1      GGCACGGAGGCAGTGTAGTGACGCAGNAAATAN-CAATATGGACCTCTCTAACGATCGTC 581
consensus_8526#2      GACGGTGTGCCTTTGCGGTGGTGGGACGTTCGCTGCCGATTGATGAGCTGGACGACGAGC 384
                      *     *                                                     

consensus_8526#0      AGTC-CCAGCTCTTGCGGAGACCGAACAGCTTC--AGCGGCAGGAATCCGTTCTCAGCCA 1065
consensus_8526#3      CATTGCCGGCACGGGTG------------------------------------------- 149
consensus_8526#1      CATAATTGGAATGAGTTGAGCATAAATCCTTTT--GCAAGGATCAAGTGGAGGGCAAGTC 639
consensus_8526#2      TGGCGGCGGCTGAAGTTGCCGAGGAGTCGCACCCAGCGGAAGTCGATAGTGCGGTGGAGC 444
                              *     *                                             

consensus_8526#0      TGATGACGAAGTACACGAAGAAACCGGCCGCAGCGTGAATCCGGCCGATCTGACCGTAAG 1125
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      TGGTGCCAGANAGCCGCGGTAATTCCAGCTCCACTAGCGTATATGAGAGTAGTNNNCGGA 699
consensus_8526#2      CGGTGGAAACGGAGGTTGAGCCCGTCACCCCGGTAGCTGAGGAGCAACCTAAGCTGAAGG 504
                                                                                  

consensus_8526#0      CCTATCGAGATAAGTCTGCAGATGCGAGGAGGCAGAGGCGGCAGCGTTGTTGGGAGGAAG 1185
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      TTAAAGC----------------------------------------------------- 706
consensus_8526#2      T----------------------------------------------------------- 505
                                                                                  

consensus_8526#0      ATAGATATTGTGTCACACGACAAGGGTGGGAAGAAGTACAGGAAGGGAGGAGAAATGGGA 1245
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      GGATAATGTTAAATCATTATTAACGATATGATCTTTACTCTTGCACGATCAATTAGTGTT 1305
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      TATGTATACGGATGAGTTATACGGTTATACGGTTACTACTAATGTTAGTGATCAAATGTA 1365
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      ACGACAAGTTTACACCCCCGAATACTCAACGTGTAGGCGACGCTCTTCAAGTGCAGTTGA 1425
consensus_8526#3      ------------------------------------------------------------
consensus_8526#1      ------------------------------------------------------------
consensus_8526#2      ------------------------------------------------------------
                                                                                  

consensus_8526#0      AGATGGAATGTTAGTGTTAACCTCGGGGCGAT 1457
consensus_8526#3      --------------------------------
consensus_8526#1      --------------------------------
consensus_8526#2      --------------------------------