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Anopheles gambiae
cluster # 8538 cluster # 8538       Sequences # 11       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8538#0 length = 1862 sequences # 3  
consensus_8538#1 length = 1241 sequences # 4  
consensus_8538#2 length = 799 sequences # 1  
consensus_8538#3 length = 689 sequences # 1  
consensus_8538#4 length = 666 sequences # 1  
consensus_8538#5 length = 639 sequences # 1  

consensusID : consensus_8538#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1862
fasta sequence
                              [TTTTTTTAACATATTGTGTAGAGCTGTTTCTGTTGTGCTGTTTGTTATTTTCCACGTTATAGCGTTATTTTTTTACCATTTCTAGCAGTTTATTGGTTTGTTAACACTTCTAAAGATGTCGGACACACCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCGGTCCGGGGCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCTTGGCGACACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCTGTTTGGGGATAATATGGAGGCAGATTATCGCCCTGCGCCCCATCTCGACCGGTACGACATGGACGATTTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGGCCGAAGCAGAGATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTTTTCTACGACAAGAGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAACGGCCAAGTCCCAGTTCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGTGCTTCGGCGGTCGGTTTGACGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGGACCCTCGAGGCGGGCGCCCTGGTGCTGGCGGATATGGGCGTTTGTCTGATCGACGAGTTTGACAAGATGAACGATCAGGACCGTACCTCGATCCACGAGGCGATGGAGCAGCAGTCGATTTCGGTTTCGAAGGCGGGCATTGTTACGTCGCTGCAGGCCCGCTGTGCGTTGATTGCTGCGGCCAACCCGATCGGCGGACGGTACGACCCGAGCATGACGTTCTCGGAGAACGTGAACCTTTCCGAGCCGATCTTGTCGCGTTTCGACATCTTGTGCGTGGTGAAGGACGAGTTCGATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTTTTTCGCACATCAAGCATCATCCCTCGAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCACAGGACCTGCTGAAGAAATACATCGTGTACGCGAAGGAGAACGTCCATCCGAAGCTGTCGAACATGGACCAGGACAAGATTGCTAACATGTACTCGCAGTGCGCCAGGAGTCGCTCTCGACCGGATCACTGCCGATCACGGTGCGCCACATCGAGAGTGTCATTCGTATGTCGGAAGCCCACGCCCGGATGCATCTGCGCGACACGGTGCAGGACGTGGACGTGAACATGGCCATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTTCCAGAAGTACCTGTCGTTCCAGCGCGATCATTCGGAGCTGCTGTTCTTCATTCTTCGCCAGCTCACGCTCGACCAGCTGGCGTACCAGCGCTGCAAGGAGGCCGGACGGCGGGGTAAGCAGGCGGAGGGTGAGCGGCCCCGAACCACCGTGGTCGAGGTGATGGAGCGGGATCTGTCCGAGCGGGCGAAGGCGATCGACATTTTCAACCTGAAACCATTCCTCGAAAGCGAACTGTTCCGACAGAATGGGTTCACCTACGACGCCAAACGTAAGGTGATCGTCCAGGTGGTTCCGGAAGCAGCCGAGCCGTAGAGTTCATTCTTTCTGCGCAACTAGCTTTAAGTCGGCTAAAGTTTATTAAGCGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGTACAATATGGTAAGGAATACTTTACGAATAATAAATGTGTGTTGTGTGTGACATCCTGACATTATAAAAACAAAAAAAGAAAAA]

[+] EMBL CNS08EUD             [TTTTTTTAACATATTGTGTAGAGCTGTTTCTGTTGTGCTGTTTGTTATTTTCCACGTTATAGCGTTATTTTTTTACCATTTCTAGCAGTTTATTGGTTTGTTAACACTTCTAAAGATGTCGGACACACCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCGGTCCGGGGCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCTTGGCGACACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCTGTTTGGGGATAATATGGAGGCAGATTATCGCCCTGCGCCCCATCTCGACCGGTACGACATGGACGATTTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGGCCGAAGCAGAGATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTTTTCTACGACAAGAGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAACGGCCAAGTCCCAGTTCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGTGCTTCGGCGGTCGGTTTGACGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGGACCCTCGAGGCGGGCGCCCTGGTGCTGGCGGATATGGGCGTTTGTCTGATCGACGAGTTTGACAAGATGAACGATCAGGACCGTACCTCGATCCACGAGGCGATGGAGCAGCAGTCGATTTCGGTTTCGAAGGCGGGCATTGTTACGTCGCTGCAGGCCCGCTGTGCGTTGATTGCTGCGGCCAACCCGATCGGCGGACGGTACGACCCGAGCATGACGTTCTCGGAGAACGTGAACCTTTCCGAGCCGATCTTGTCGCGTTTCGACATCTTGTGCGTGGTGAAGGACGAGTTCGATCCGATGCAGGATAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08EUE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCTTGTCGCGTTTCGACATCTTGTGCGTGGTGAAGGACGAGTTCGATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTTTTTCGCACATCAAGCATCATCCCTCGAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCACAGGACCTGCTGAAGAAATACATCGTGTACGCGAAGGAGAACGTCCATCCGAAGCTGTCGAACATGGACCAGGACAAGATTGCTAACATGTACTCGCAGTGCGCCAGGAGTCGCTCTCGACCGGATCACTGCCGATCACGGTGCGCCACATCGAGAGTGTCATTCGTATGTCGGAAGCCCACGCCCGGATGCATCTGCGCGACACGGTGCAGGACGTGGACGTGAACATGGCCATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTTCCAGAAGTACCTGTCGTTCCAGCGCGATCATTCGGAGCTGCTGTTCTTCATTCTTCGCCAGCTCACGCTCGACCAGCTGGCGTACCAGCGCTGCAAGGAGGCCGGACGGCGGGGTAAGCAGGCGGAGGGTGAGCGGCCCCGAACCACCGTGGTCGAGGTGATGGAGCGGGATCTGTCCGAGCGGGCGAAGGCGATCGACATTTTCAACCTGAAACCATTCCTCGAAAGCGAACTGTTCCGACAGAATGGGTTCACCTACGACGCCAAACGTAAGGTGATCGTCCAGGTGGTTCCGGAAGCAGCCGAGCCGTAGAGTTCATTCTTTCTGCGCAACTAGCTTTAAGTCGGCTAAAGTTTATTAAGCGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGTACAATATGGTAAGGAATACTTTACGAATAATAAATGTGTGTTGTGTGTGACATCCTGACATTATAAAAACAAAAAAAGAAAAA]
[+] EMBL BM629712             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgGGCCATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTTCCAGAAGTACCTGTCGTTCCAGCGCGACCATTCGGAGCTGCTGTTCTTCATTCTTCGCCAGCTCACGCTCGACCAGCTGGCGTACCAGCGTTGCAAGGAGGCCGGACGGCGAGGCAAGCAGGCGGAGGGTGATCGGCCCCGAACCACCGTGGTCGAGGTGATGGAGCGGGATCTGTCCGAGCGGGCGAAGGCGATCGACATTTTCAACCTGAAACCATTCCTCGAAAGCGAACTGTTCCGACAGAATGGGTTCACCTACGACGCCAAACGGAAGGTGATCGTCCAGGTGGTTCCGGAAGCAGCCGAGCCGTAGAGTTCATTCTTTCTGCGCAACTAGCTTTAAGTCGGCTAAAGTTTATTAA CGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGTACAATATGGT                                                                         ]


>consensus_8538#0 TTTTTTTAACATATTGTGTAGAGCTGTTTCTGTTGTGCTGTTTGTTATTTTCCACGTTAT AGCGTTATTTTTTTACCATTTCTAGCAGTTTATTGGTTTGTTAACACTTCTAAAGATGTC GGACACACCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCG GTCCGGGGCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCT TGGCGACACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCT GTTTGGGGATAATATGGAGGCAGATTATCGCCCTGCGCCCCATCTCGACCGGTACGACAT GGACGATTTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGGCCGAAG CAGAGATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTTTTCT ACGACAAGAGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAACGGCCAAGTCCCAGT TCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGTGCTT CGGCGGTCGGTTTGACGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGGACCCTCG AGGCGGGCGCCCTGGTGCTGGCGGATATGGGCGTTTGTCTGATCGACGAGTTTGACAAGA TGAACGATCAGGACCGTACCTCGATCCACGAGGCGATGGAGCAGCAGTCGATTTCGGTTT CGAAGGCGGGCATTGTTACGTCGCTGCAGGCCCGCTGTGCGTTGATTGCTGCGGCCAACC CGATCGGCGGACGGTACGACCCGAGCATGACGTTCTCGGAGAACGTGAACCTTTCCGAGC CGATCTTGTCGCGTTTCGACATCTTGTGCGTGGTGAAGGACGAGTTCGATCCGATGCAGG ATAAGCATTTGGCCGAGTTCGTGGTTTTTCGCACATCAAGCATCATCCCTCGAAGGAGGC CGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCACAGGACCTGCTGAAGAA ATACATCGTGTACGCGAAGGAGAACGTCCATCCGAAGCTGTCGAACATGGACCAGGACAA GATTGCTAACATGTACTCGCAGTGCGCCAGGAGTCGCTCTCGACCGGATCACTGCCGATC ACGGTGCGCCACATCGAGAGTGTCATTCGTATGTCGGAAGCCCACGCCCGGATGCATCTG CGCGACACGGTGCAGGACGTGGACGTGAACATGGCCATCCGCATGATGCTGGAAAGCTTT ATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTTCCAGAAGTACCTG TCGTTCCAGCGCGATCATTCGGAGCTGCTGTTCTTCATTCTTCGCCAGCTCACGCTCGAC CAGCTGGCGTACCAGCGCTGCAAGGAGGCCGGACGGCGGGGTAAGCAGGCGGAGGGTGAG CGGCCCCGAACCACCGTGGTCGAGGTGATGGAGCGGGATCTGTCCGAGCGGGCGAAGGCG ATCGACATTTTCAACCTGAAACCATTCCTCGAAAGCGAACTGTTCCGACAGAATGGGTTC ACCTACGACGCCAAACGTAAGGTGATCGTCCAGGTGGTTCCGGAAGCAGCCGAGCCGTAG AGTTCATTCTTTCTGCGCAACTAGCTTTAAGTCGGCTAAAGTTTATTAAGCGTTTACACC ATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGTACAATATGGTAAGGAATACTT TACGAATAATAAATGTGTGTTGTGTGTGACATCCTGACATTATAAAAACAAAAAAAGAAA AA



consensusID : consensus_8538#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1241
fasta sequence
                              [GTCGGCTAAAGTTTATTAACGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGTACAATATGGTAAGGAATACTTTACGAATAATAAATGTGTGTTGTGTGTGACATCCTGACATTATAAGCTTACATAGAACAGATAGTTTCGTGTGTATGTCGGGGGGGATTACACGTAGATTCGGGGACTGCATACTTACCTTGCACCGTAAGGTAGATGATGCTCAGCAATTTCATGGCATTTAGGGTAGAAATATCGTTAGCAAGAAGACGATCGCCCTTTTAGCCGTGCGGAATAGCAACGGTATGTGGACGTTCTCAACACGGAAACTTGCACTATTCGCCCTCCTTAGCTCGCCGTTTTCTCTTTCGTTTACGCTCGTTTTCCGAGGCAGAAGAGTCGTCGCT-GGAGCTATCGCTACTGCTGCTACTGCTATCACTAGCACTGCTGCTAGCACTATCGTCCTTTGCAACCTCTTTCCCCTTTTTTGTGTCTTTTTTGCTTTCCTTCGTTTTTCTATCGCTTCCAGCCTTCTGGCTTCCGTTTGTGGCCTTTTTCCGCTTGGTTAGTCGTGTTTTTTTCTTCGCCACT-CTGTCCTCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCCGCCGCTAGAGCTGCTACTGCTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTGAATCGCTGCTACTGGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTATCGTCACTGCTGTCGGATGTATCGTCGGATGCTGCCTTTTTCTTAGTCTCCCCACCGGACGACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATCACCATTTTTGGAGCCAATTTTGTTTAAATTCTTTTTCAACACCTGGGTACGGGATGAACGATGGAGATACTTTCGTTTGCCTTGGCATTCGTAGCTCCAGTGCCCAAATTCCAAACATTTCTGACACCGTATTCCTTTGGGAAATGCAGCCGCTAGTTTCGCTTCTTTCTGTTTAAGAGCTAGCTTTTGTGCGCCGAGATGCATTTTGAACGATTCTGACTGTGCTCGATACGCTCGTTTTTTTGTTGTCTTGCCGGCAAGCACGGAATATCCTAAATTTTCATTTGGTAAACAACGTTTGCGCTTTTCCGATACACGACGACGAAGGCGACCATTCAGCCGG]

[+] EMBL CNS096YO             [GTCGGCTAAAGTTTATTAACGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGTACAATATGGTAAGGAATACTTTACGAATAATAAATGTGTGTTGTGTGTGACATCCTGACATTATAAGCTTACATAGAACAGATAGTTTCGTGTGTATGTCGGGGGGGATTACACGTAGATTCGGGGACTGCATACTTACCTTGCACCGTAAGGTAGATGATGCTCAGCAATTTCATGGCATTTAGGGTAGAAATATCGTTAGCAAGAAGACGATCGCCCTTTTAGCCGTGCGGAATAGCAACGGTATGTGGACGTTCTCAACACGGAAACTTGCACTATTCGCCCTCCTTAGCTCGCCGTTTTCTCTTTCGTTTACGCTCGTTTTCCGAGGCAGAAGAGTCGTCGCT GGAGCTATCGCTACTGCTGCTACTGCTATCACTAGCACTGCTGCTAGCACTATCGTCCTTTGCAACCTCTTTCCCCTTTTTTGTGTCTTTTTTGCTTTCCTTCGTTTTTCTATCGCTTCCAGCCTTCTGGCTTCCGTTTGTGGCCTTTTTCCGCTTGGTTAGTCGTGTTTTTTTCTTCGCCACT CTGTCCTCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCCGCCGCTAGAGCTGCTACTGCTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTGAATCGCTGCTACTGGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTATCGTCACTGCTGTCGGATGTATCGTCGGATGCTGCCTTTTTCTTAGTCTCCCCACCGGACGACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATCAC                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS096YN             [                                                                                                                                                                                                                                                                              CAAGAAGACGATCGCCCTTTTAGCCGTGCGGAATAGCAACGGTATGTGGACGTTCTCAACACGGAAACTTGCACTATTCGCCCTCCTTAGCTCGCCGTTTTCTCTTTCGTTTACGCTCGTTTTCCGAGGCAGAAGAGTCGTCGCTGGGAG TATCGCTACTGCTGCTACTGCTATCACTAGCACTGCTGCTAGCACTATCGTCCTTTGCAACCTCTTTCCCCTTTTTTGTGTCTTTTTTGCTTTCCTTCGTTTTTCTATCGCTTCCAGCCTTCTGGCTTCCGTTTGTGGCCTTTTTCCGCTTGGTTAGTCGTGTTTTTTTCTTCGCCACT CTGTCCTCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCCGCCGCTAGAGCTGCTACTGCTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTGAATCGCTGCTACTGGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTATCGTAACTGCTGTCGGATGTATCGTCGGATGCTGCCTTTTTCTTAGTCTCCCCACCGGACGACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATCACCATTTTTGGAGCCAATTTTGTTTAAATTCTTTTTCAACACCTGGGTACGGGATGAACGATGGAGATACTTTCGTTTGCCTTGGCATTCGTAGCTCCAGTGCCCAAATTCCAAACATTTCTGACACCGTATTCCTTTGGGGAATGCAGCCGCAAGTTTCGCTTCTTTCTGTTTAAGAGCTAGCTTTTGTGCGCCGAGATGCATTTTGAACGATTCTGACTGTGCTCAATACGTTCGTTTTTTTGTTGTCTTGCCGGCAAGCACGGAATATCCTAAATTTTCATTTGGTAAACAACGTTTGCGCTTTTCCGATACACGACGACGAAGGCGACCA         ]
[-] EMBL BM629478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTGGCCTTTTTCCGCTTGGTTAGTCGTGCTTTTTTCTTCGCCACT CTGTCCTCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCTGCCGCTAGAGCTGCTACTGCTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTGAATCGCTGCTACTAGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTATCGTCACTGCTGTCGGATGTATCGTCGGATGCTGCCTTTTTCTTAGTCTCCCCACCGGACGACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATCACCATTTTTGGAGCCAATTTTGTTTAAATTCTTTTTCAACACCTGGGTACGGGATGAACGATGGAGATACTTTCGTTTGCCTTGGCATTCGTAGCTCCAGTGCCCAAATTCCAAACATTTCTGACACCGTATTCCTTTGGGAAATGCAGCCGCTAGTTTCGCTTCTTTCTGTTTAAGAGCTAGCTTTTGTGCGCCGAGATGCATTTTGAACGATTCTGACTGTGCTCGATACGCTCGTTTTTTTGTTGTCTTGCCGGCAAGCACGGAATATCCTAAATTTTCATTTGGTAAACAACGTTTGCGCTTTTCCGATACACGACGACGAAGGCGACCATTCAGCCGG]
[-] EMBL BM580369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCTTTTTCCGCTTGGTTAGTCGTGCTTTTTTCTTCGCCACTCCTGTCCTCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCTGCCGCTAGAGCTGCTACTGCTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTGAATCGCTGCTACTAGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTATCGTCACTGCTGTCGGATGTATCGTCGGATGCTGCCTTTTTCTTAGTCTCCCCACCGGACGACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATCACCATTTTTGGAGCCAATTTTGTTTAAATTCTTTTTCAACACCTGGGTACGGGATGAACGATGGAGATACTTTCGTTTGCCTTGGCATTCGTAGCTCCAGTGCCCAAATTCCAAACATTTCTGACACCGTATTCCTTTGGGAAATGCAGCCGCTAGTTTCGCTTCTTTCTGTTTAAGAGCTAGCTTTTGTGCGCCGAGATGCATTTTGAACGATTCTGACTGTGCTCGATACGCTCGTTTTTTTGTTGTCTTGCCGGCAAGCACGGAATATCCTAAATTTTCATTTGGTAAACAACGTTTGCGCTTTTCCGcgg                             ]


>consensus_8538#1 GTCGGCTAAAGTTTATTAACGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTAC GCTTTTGTACAATATGGTAAGGAATACTTTACGAATAATAAATGTGTGTTGTGTGTGACA TCCTGACATTATAAGCTTACATAGAACAGATAGTTTCGTGTGTATGTCGGGGGGGATTAC ACGTAGATTCGGGGACTGCATACTTACCTTGCACCGTAAGGTAGATGATGCTCAGCAATT TCATGGCATTTAGGGTAGAAATATCGTTAGCAAGAAGACGATCGCCCTTTTAGCCGTGCG GAATAGCAACGGTATGTGGACGTTCTCAACACGGAAACTTGCACTATTCGCCCTCCTTAG CTCGCCGTTTTCTCTTTCGTTTACGCTCGTTTTCCGAGGCAGAAGAGTCGTCGCTGGAGC TATCGCTACTGCTGCTACTGCTATCACTAGCACTGCTGCTAGCACTATCGTCCTTTGCAA CCTCTTTCCCCTTTTTTGTGTCTTTTTTGCTTTCCTTCGTTTTTCTATCGCTTCCAGCCT TCTGGCTTCCGTTTGTGGCCTTTTTCCGCTTGGTTAGTCGTGTTTTTTTCTTCGCCACTC TGTCCTCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCCGCCGCTAGAGCTGC TACTGCTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTG AATCGCTGCTACTGGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTAT CGTCACTGCTGTCGGATGTATCGTCGGATGCTGCCTTTTTCTTAGTCTCCCCACCGGACG ACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATCAC CATTTTTGGAGCCAATTTTGTTTAAATTCTTTTTCAACACCTGGGTACGGGATGAACGAT GGAGATACTTTCGTTTGCCTTGGCATTCGTAGCTCCAGTGCCCAAATTCCAAACATTTCT GACACCGTATTCCTTTGGGAAATGCAGCCGCTAGTTTCGCTTCTTTCTGTTTAAGAGCTA GCTTTTGTGCGCCGAGATGCATTTTGAACGATTCTGACTGTGCTCGATACGCTCGTTTTT TTGTTGTCTTGCCGGCAAGCACGGAATATCCTAAATTTTCATTTGGTAAACAACGTTTGC GCTTTTCCGATACACGACGACGAAGGCGACCATTCAGCCGG



consensusID : consensus_8538#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 799
fasta sequence
                              [CCGCGGACGCGTGGGCGGGTGTGCTGCCGCAGCTCTCCGTCATCAAGTACGACTGCGTCAAGTGTGGCTACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTGTCCCGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCAGACGCTGTACCGGAACTATCAGAAGATCACGCTTCAGGAGTCTCCGGGAAGAATTCCGGCCGGACGTATACCCCGCAGCAAGGATTGCGTGCTGCTGGCCGATCTGTGCGATCAGTGCAAACCGGGTGACGAAATCGAGGTGACGGGCATCTACACCAACAACTACGACGGATCGCTCAACACGGAGCAGGGCTTCCCGGTGTTTGCAACGGTGCTGATCGCGAACCATCTGGTGGTGAAGGACAGTAAGCAGGTGGTGGCCTCACTGACCGACGAGGACATTTCGACAATCCAGCGTCTGAGCCGCGATCCGCGCATCAGCGATCGCATCACGCAGAGCATGGCACCGTCGATCTACGGTCACGAGTACATCAAGCGAGGGCTAGCGCTGTGTCTGTTCGGGGGCGAATCGAAGAACCCGGGCAACAAGCACAAAATCCGCGGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAAACGGCCAAGTCCCAGTTCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGGTGCTTTCGGCGGTCGGGTTAACGGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGGACCCTCGAGGCGGGCGCCC]

[+] EMBL BM618060             [CCGCGGACGCGTGGGCGGGTGTGCTGCCGCAGCTCTCCGTCATCAAGTACGACTGCGTCAAGTGTGGCTACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTGTCCCGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCAGACGCTGTACCGGAACTATCAGAAGATCACGCTTCAGGAGTCTCCGGGAAGAATTCCGGCCGGACGTATACCCCGCAGCAAGGATTGCGTGCTGCTGGCCGATCTGTGCGATCAGTGCAAACCGGGTGACGAAATCGAGGTGACGGGCATCTACACCAACAACTACGACGGATCGCTCAACACGGAGCAGGGCTTCCCGGTGTTTGCAACGGTGCTGATCGCGAACCATCTGGTGGTGAAGGACAGTAAGCAGGTGGTGGCCTCACTGACCGACGAGGACATTTCGACAATCCAGCGTCTGAGCCGCGATCCGCGCATCAGCGATCGCATCACGCAGAGCATGGCACCGTCGATCTACGGTCACGAGTACATCAAGCGAGGGCTAGCGCTGTGTCTGTTCGGGGGCGAATCGAAGAACCCGGGCAACAAGCACAAAATCCGCGGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAAACGGCCAAGTCCCAGTTCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGGTGCTTTCGGCGGTCGGGTTAACGGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGGACCCTCGAGGCGGGCGCCC]


>consensus_8538#2 CCGCGGACGCGTGGGCGGGTGTGCTGCCGCAGCTCTCCGTCATCAAGTACGACTGCGTCA AGTGTGGCTACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCT CCTGTCCCGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCAGACGCTGTACC GGAACTATCAGAAGATCACGCTTCAGGAGTCTCCGGGAAGAATTCCGGCCGGACGTATAC CCCGCAGCAAGGATTGCGTGCTGCTGGCCGATCTGTGCGATCAGTGCAAACCGGGTGACG AAATCGAGGTGACGGGCATCTACACCAACAACTACGACGGATCGCTCAACACGGAGCAGG GCTTCCCGGTGTTTGCAACGGTGCTGATCGCGAACCATCTGGTGGTGAAGGACAGTAAGC AGGTGGTGGCCTCACTGACCGACGAGGACATTTCGACAATCCAGCGTCTGAGCCGCGATC CGCGCATCAGCGATCGCATCACGCAGAGCATGGCACCGTCGATCTACGGTCACGAGTACA TCAAGCGAGGGCTAGCGCTGTGTCTGTTCGGGGGCGAATCGAAGAACCCGGGCAACAAGC ACAAAATCCGCGGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAAACGGCCAAGTCC CAGTTCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGG TGCTTTCGGCGGTCGGGTTAACGGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGG ACCCTCGAGGCGGGCGCCC



consensusID : consensus_8538#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence
                              [CCGCAGATTGTGTAGAGCTGTCTCTGTTGTGCTGTTTGTTATTTTCCACGTTATAGCGTTATTTTTTACCATTTCTAGCAGTTTATTGATTTGTTAACACTTCTAAAGATGTCGGATACACCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCGGTCCGGGGCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCTTGGCGATACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCTGTTTGGGGATAATATGGAGGCAGACTATCGCCCTGCGCCCCATCTCGACCGGTACGACATGGACGATCTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGCGGCCGAAGCAGAGATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTGTTCTACGACAAGAGCGACGACGAAGACGATATCCCGCGGGCCAAAAGGCGTGCCGCTGAAAAGGCTGCCGAAATCGGAGCCGAAACAGAAACCGATGCCGAGATGGTGGAATCAATCGAAAACCTCGAGGACACAAAGGGCCACAGCATCAAGGAGTGGGTGTCAATGTTGGGCCCACGGACAGAGATTTCGAACCGCTTCAATAGCTTCTTGCGCAC]

[+] EMBL BM575769             [CCGCAGATTGTGTAGAGCTGTCTCTGTTGTGCTGTTTGTTATTTTCCACGTTATAGCGTTATTTTTTACCATTTCTAGCAGTTTATTGATTTGTTAACACTTCTAAAGATGTCGGATACACCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCGGTCCGGGGCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCTTGGCGATACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCTGTTTGGGGATAATATGGAGGCAGACTATCGCCCTGCGCCCCATCTCGACCGGTACGACATGGACGATCTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGCGGCCGAAGCAGAGATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTGTTCTACGACAAGAGCGACGACGAAGACGATATCCCGCGGGCCAAAAGGCGTGCCGCTGAAAAGGCTGCCGAAATCGGAGCCGAAACAGAAACCGATGCCGAGATGGTGGAATCAATCGAAAACCTCGAGGACACAAAGGGCCACAGCATCAAGGAGTGGGTGTCAATGTTGGGCCCACGGACAGAGATTTCGAACCGCTTCAATAGCTTCTTGCGCAC]


>consensus_8538#3 CCGCAGATTGTGTAGAGCTGTCTCTGTTGTGCTGTTTGTTATTTTCCACGTTATAGCGTT ATTTTTTACCATTTCTAGCAGTTTATTGATTTGTTAACACTTCTAAAGATGTCGGATACA CCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCGGTCCGGG GCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCTTGGCGAT ACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCTGTTTGGG GATAATATGGAGGCAGACTATCGCCCTGCGCCCCATCTCGACCGGTACGACATGGACGAT CTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGCGGCCGAAGCAGAG ATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTGTTCTACGAC AAGAGCGACGACGAAGACGATATCCCGCGGGCCAAAAGGCGTGCCGCTGAAAAGGCTGCC GAAATCGGAGCCGAAACAGAAACCGATGCCGAGATGGTGGAATCAATCGAAAACCTCGAG GACACAAAGGGCCACAGCATCAAGGAGTGGGTGTCAATGTTGGGCCCACGGACAGAGATT TCGAACCGCTTCAATAGCTTCTTGCGCAC



consensusID : consensus_8538#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [AGAATCGGCACGAGGGNAGGGCATTGTTACGTCGCTGCAGGCCCGCTTGTGCGGTGATTGCTGCGGCCAACCCGATCGGCGGACGGTACGACCCGAGCATGACGTTCTCGGAGAACGTGAACCTTTCCGAACCGATCTTGTCGCGTTTCGACATCCTGTGCGTGGTGAAGGACGAGTTCGATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTTGCTTCGCACATCAAGCATCATCCCTGAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCACAGGACCTGCTGAAGAAGTACATCGTGTACGCGAAGGAGAACGTCCATCCGAAGCTGTCGAACATGGACCAGGACAAGATTGCTAACATGTACTCGCAGCTGCGCCAGGAGTCGCTCTCGACCGGATCACTGCCGATCACGGTGCGCCACATCGAGAGTGTCATTCGTATGTCGGAAGCCCACGCCCGGATGCATCTGCGCGACACGGTGCAGGACGTGGACGTGAACATGGCTATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTTCCAGAAGTACCTGTCGTTCCAGCGCGACCATTCGGAGTTGCTGTACTTCATTCTTCGCCAGCTCAC]

[+] EMBL BX469534             [AGAATCGGCACGAGGGNAGGGCATTGTTACGTCGCTGCAGGCCCGCTTGTGCGGTGATTGCTGCGGCCAACCCGATCGGCGGACGGTACGACCCGAGCATGACGTTCTCGGAGAACGTGAACCTTTCCGAACCGATCTTGTCGCGTTTCGACATCCTGTGCGTGGTGAAGGACGAGTTCGATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTTGCTTCGCACATCAAGCATCATCCCTGAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCACAGGACCTGCTGAAGAAGTACATCGTGTACGCGAAGGAGAACGTCCATCCGAAGCTGTCGAACATGGACCAGGACAAGATTGCTAACATGTACTCGCAGCTGCGCCAGGAGTCGCTCTCGACCGGATCACTGCCGATCACGGTGCGCCACATCGAGAGTGTCATTCGTATGTCGGAAGCCCACGCCCGGATGCATCTGCGCGACACGGTGCAGGACGTGGACGTGAACATGGCTATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTTCCAGAAGTACCTGTCGTTCCAGCGCGACCATTCGGAGTTGCTGTACTTCATTCTTCGCCAGCTCAC]


>consensus_8538#4 AGAATCGGCACGAGGGNAGGGCATTGTTACGTCGCTGCAGGCCCGCTTGTGCGGTGATTG CTGCGGCCAACCCGATCGGCGGACGGTACGACCCGAGCATGACGTTCTCGGAGAACGTGA ACCTTTCCGAACCGATCTTGTCGCGTTTCGACATCCTGTGCGTGGTGAAGGACGAGTTCG ATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTTGCTTCGCACATCAAGCATCATC CCTGAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCACAGGA CCTGCTGAAGAAGTACATCGTGTACGCGAAGGAGAACGTCCATCCGAAGCTGTCGAACAT GGACCAGGACAAGATTGCTAACATGTACTCGCAGCTGCGCCAGGAGTCGCTCTCGACCGG ATCACTGCCGATCACGGTGCGCCACATCGAGAGTGTCATTCGTATGTCGGAAGCCCACGC CCGGATGCATCTGCGCGACACGGTGCAGGACGTGGACGTGAACATGGCTATCCGCATGAT GCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTAATGAAGAAGATGCGCGCCACCTT CCAGAAGTACCTGTCGTTCCAGCGCGACCATTCGGAGTTGCTGTACTTCATTCTTCGCCA GCTCAC



consensusID : consensus_8538#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence
                              [TGAGGCAGAATCCCCGAGGTTAGAGCTCTCGTCATCAAGTACGACTGNTCAAGTGTGGCTACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTGTCCCGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCAGACGCTGTACCGGAATTATCAGAAGATCACGCTCCAGGAGTCTCCGGGAAGAATTCCGGCCGGACGTATACCCGAGAAGGATTGCGTGCTGGTTGGCCGATCTGTGCGATCAGTGCAACACCGGGTGACGAAATCGAGGTGACCGGGCATCTACAACCAAACAACTACGACCGGATCCGCCTCAACACGGCACGCACGGGCTTCCCGGTGTNCTGCCANNCGGTGCTGATCCGCGAAACCATCCTGGGTGGGTGAACGGACAGCACAGCCAGGTGGGTAGGCCCTCACTGACCGACCGACGCGACACTTNTCGACNAGTTCCNNGCGCTCTGAAGCCGCTGATCCGCCGCCATCACCGANCGCATCACGCAACACGCATGGACACCGCCGACCAACGGCCACCAACCTACACATACAACGCCGGACGCGCGCTAGCCNCCCGCAGCTCTCGCCCCCGCCCCCCCACTCNCCACAAACCC]

[+] EMBL AL696096             [TGAGGCAGAATCCCCGAGGTTAGAGCTCTCGTCATCAAGTACGACTGNTCAAGTGTGGCTACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTGTCCCGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCAGACGCTGTACCGGAATTATCAGAAGATCACGCTCCAGGAGTCTCCGGGAAGAATTCCGGCCGGACGTATACCCGAGAAGGATTGCGTGCTGGTTGGCCGATCTGTGCGATCAGTGCAACACCGGGTGACGAAATCGAGGTGACCGGGCATCTACAACCAAACAACTACGACCGGATCCGCCTCAACACGGCACGCACGGGCTTCCCGGTGTNCTGCCANNCGGTGCTGATCCGCGAAACCATCCTGGGTGGGTGAACGGACAGCACAGCCAGGTGGGTAGGCCCTCACTGACCGACCGACGCGACACTTNTCGACNAGTTCCNNGCGCTCTGAAGCCGCTGATCCGCCGCCATCACCGANCGCATCACGCAACACGCATGGACACCGCCGACCAACGGCCACCAACCTACACATACAACGCCGGACGCGCGCTAGCCNCCCGCAGCTCTCGCCCCCGCCCCCCCACTCNCCACAAACCC]


>consensus_8538#5 TGAGGCAGAATCCCCGAGGTTAGAGCTCTCGTCATCAAGTACGACTGNTCAAGTGTGGCT ACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTGTCCCG AGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCAGACGCTGTACCGGAATTATC AGAAGATCACGCTCCAGGAGTCTCCGGGAAGAATTCCGGCCGGACGTATACCCGAGAAGG ATTGCGTGCTGGTTGGCCGATCTGTGCGATCAGTGCAACACCGGGTGACGAAATCGAGGT GACCGGGCATCTACAACCAAACAACTACGACCGGATCCGCCTCAACACGGCACGCACGGG CTTCCCGGTGTNCTGCCANNCGGTGCTGATCCGCGAAACCATCCTGGGTGGGTGAACGGA CAGCACAGCCAGGTGGGTAGGCCCTCACTGACCGACCGACGCGACACTTNTCGACNAGTT CCNNGCGCTCTGAAGCCGCTGATCCGCCGCCATCACCGANCGCATCACGCAACACGCATG GACACCGCCGACCAACGGCCACCAACCTACACATACAACGCCGGACGCGCGCTAGCCNCC CGCAGCTCTCGCCCCCGCCCCCCCACTCNCCACAAACCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8538#0      TTTTTTTAACATATTGTGTAGAGCTGTTTCTGTTGTGCTGTTTGTTATTTTCCACGTTAT 60
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      AGCGTTATTTTTTTACCATTTCTAGCAGTTTATTGGTTTGTTAACACTTCTAAAGATGTC 120
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      GGACACACCAAGCTCCCCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCG 180
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      GTCCGGGGCCACTTCTCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCT 240
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      TGGCGACACTACCGTCCGTGACGAGATTTACGATGAGGAAGAGGCGGACGGGGAAGAGCT 300
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      GTTTGGGGATAATATGGAGGCAGATTATCGCCCTGCGCCCCATCTCGACCGGTACGACAT 360
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      GGACGATTTGGATACGGAAGAGTACAGCGACATCTCGCAGGCGGATCGCGCAGGCCGAAG 420
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ----------------------------------------------------GTCGGCTA 8
                                                                                  

consensus_8538#0      CAGAGATGCGCCGGCGAGACCGTGATGCCGGAGTGCACCGTGATCATCGCGATCTTTTCT 480
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      AAGTTTATTAACGTTTACACCATTATTTCTTTTACACATTTTCTCATTTTACGCTTTTGT 68
                                                                                  

consensus_8538#0      ACGACAAGAGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAACGGCCAAGTCCCAGT 540
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ACAATATGGTAAGGAATACTTTACGAATAATAAATGTGTGTTGTGTGTGACATCCTGACA 128
                                                                                  

consensus_8538#0      TCTTGAAGT-ACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGGGTGCT 599
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      TTATAAGCTTACATAGAACAGATAGTTTCGTGTGTATGTCGGGGGGGATTACACGTAGAT 188
                                                                                  

consensus_8538#0      TCGGCGGTCGGTTTGACGGCGTACGTACGGCGCAACCCAACGACGCGCGAGTGGACCCTC 659
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      TCGGGGACTGCATACTTACCTTGCACCGTAAGGTAGATGATGCTCAGCAATTTCATGGCA 248
                                                                                  

consensus_8538#0      GAGGCGGGCGCCCTGGTGCTGGCGGATATGGGCGTTTGTCTGATCGACGAGTTTGACAAG 719
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      TTTAGGGTAGAAATATCGTTAGCAAGAA--GACGATCGCCCTTTTAGCCGTGCGGAATAG 306
                                                                                  

consensus_8538#0      ATGAACGATCAGGACCGTACCTCGATCCACGAGGCGATGGAGCAGCAGTCGATTTCGGTT 779
consensus_8538#4      --------------------------------------------------AGAATCGGCA 10
consensus_8538#3      --------------------------------------------------CCGCAGATTG 10
consensus_8538#2      --------------------------------------------------CCGCGGACGC 10
consensus_8538#5      ---------------------------------------------------------TGA 3
consensus_8538#1      CAACGGTATGTGGACGTTCTCAACACGGAAACTTGCACTATTCGCCCTCCTTAGCTCGCC 366
                                                                                  

consensus_8538#0      TCGAAGGCGGGCATTGTTACGTCGCT--GCAGGCCCGCT-GT-GCGTTGATTGCTGCGGC 835
consensus_8538#4      CGAGGGNAGGGCATTGTTACGTCGCT--GCAGGCCCGCTTGT-GCGGTGATTGCTGCGGC 67
consensus_8538#3      TGTAGAGCTGTCTCTGTTGTGCTGTTT-GTTATTTTCCACGTTATAGCGTTATTTTTTAC 69
consensus_8538#2      GTGGGCGGGTGTGCTGCCGCAGCTCTCCGTCATCAAGTACG--ACTGCGTCAAGTGTGGC 68
consensus_8538#5      GGCAGAATCCCCGAGGTTAGAGCTCTC-GTCATCAAGTACG--ACTGN-TCAAGTGTGGC 59
consensus_8538#1      GTTTTCTCTTTCGTTTACGCTCGTTTTCCGAGGCAGAAGAGTCGTCGCTGGAGCTATCGC 426
                                               *              *             *    *

consensus_8538#0      CAACCCGATCGGCGGACGGTACGACCCGAGCAT--GACGTTCTCGGAGAACGTGAACCTT 893
consensus_8538#4      CAACCCGATCGGCGGACGGTACGACCCGAGCAT--GACGTTCTCGGAGAACGTGAACCTT 125
consensus_8538#3      CATTTCTAGCAGTTTATTGATTTGTTAACACTTCTAAAGATGTCGGATACACCAAGCTCC 129
consensus_8538#2      TACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTG-TCC 127
consensus_8538#5      TACGTGCTGGGACCGTTCGTGCAGAGCCAGAACACGGAAGTAAAGCCCGGCTCCTG-TCC 118
consensus_8538#1      TAC-TGCTGCTACTGCTATCACTAGCACTGCTGCTAGCACTATCGTCCTTTGCAACCTCT 485
                       *                                      *   *               

consensus_8538#0      TCCGAGCCGATCTT---GTCGCGTTTCGACATCTTGTGCGT--GGTGAAGGACGAGTTCG 948
consensus_8538#4      TCCGAACCGATCTT---GTCGCGTTTCGACATCCTGTGCGT--GGTGAAGGACGAGTTCG 180
consensus_8538#3      CCAGCACCAAACGTACCGTCGGATATGGATCGACGAAACTTCCGGTCCGGGGCCACTTC- 188
consensus_8538#2      CGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCA-GACGCTGTACCGGAACT 186
consensus_8538#5      CGAGTGTCAAAGTGTTGGTCCGTTCTCGATCAACATGGAGCA-GACGCTGTACCGGAATT 177
consensus_8538#1      TTCCCCTTTTTTGTGTCTTTTTTGCTTTCCTTCGTTTTTCTATCGCTTCCAGCCTTCTGG 545
                                        *      *                          *       

consensus_8538#0      ATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTT---TTTCGCACATCAAGCATCA 1005
consensus_8538#4      ATCCGATGCAGGATAAGCATTTGGCCGAGTTCGTGGTTG--CTTCGCACATCAAGCATCA 238
consensus_8538#3      -TCCGGTCGGTGATTTCGAGCCGTTTGAAGATGAGGCGGAAATTCTTGGCGATACTACCG 247
consensus_8538#2      ATCAGA----AGATCACGCTTCAG--GAGTCTCCGGGAAGAATTCCGGCCGGACGTATAC 240
consensus_8538#5      ATCAGA----AGATCACGCTCCAG--GAGTCTCCGGGAAGAATTCCGGCCGGACGTATAC 231
consensus_8538#1      CTTCCGTTTGTGGCCTTTTTCCGCTTGGTTAGTCGTGTTTTTTTCTTCGCCACTCTGTCC 605
                       *         *              *       *       ***               

consensus_8538#0      TCCCTC--GAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCA 1063
consensus_8538#4      TCCCT---GAAGGAGGCCGAAGAGCCCGACACACAACCGGAGGACACGATGCAGATCCCA 295
consensus_8538#3      TCCGT----GACGAGATTTACGA---TGAGGAAGAGGCGGACGGGGAAGAGCTGTTTGGG 300
consensus_8538#2      CCCGC----AGCAAGGATTGCGTGCTG-CTGGCCGATCTGTGCGATCAGTGCAA-ACCGG 294
consensus_8538#5      CC-------GAGAAGGATTGCGTGCTGGTTGGCCGATCTGTGCGATCAGTGCAACACCGG 284
consensus_8538#1      TCCTCCGAGGAGGAAGCTTCATCATCACTGCTGCTGCTGCCGCCGCTAGAGCTGCTACTG 665
                       *           *                                    **        

consensus_8538#0      CAGGACCTGCTGAAGAAATA-CATCGTGTACGCGAAGGAGAACG--TCCATCCGAAGCTG 1120
consensus_8538#4      CAGGACCTGCTGAAGAAGTA-CATCGTGTACGCGAAGGAGAACG--TCCATCCGAAGCTG 352
consensus_8538#3      GATAATATGGAGGCAGACTATCGCCCTGCGCCCCATCTCGACCGG-TACGACATGGACGA 359
consensus_8538#2      GTGA---CGAAATCGAGGTG--AC-GGGCATCTACACC--AACAACTACGAC-GGATCG- 344
consensus_8538#5      GTGA---CGAAATCGAGGTG--ACCGGGCATCTACAACCAAACAACTACGACCGGATCCG 339
consensus_8538#1      CTGGAGGAACTATCGCTAGAGCTGCTGCCATCGTCGCTACTACTGCTACTACCTGAATCG 725
                                                                *   * *  *        

consensus_8538#0      TC-GAACATGGACCAGGACAA-GATTGCTAACATG-TA---CTCGCAG-TGCGCCAGGAG 1173
consensus_8538#4      TC-GAACATGGACCAGGACAA-GATTGCTAACATG-TA---CTCGCAGCTGCGCCAGGAG 406
consensus_8538#3      TCTGGATACGGAAGAGTACAGCGACATCTCGCAGG-CGGATCGCGCAGCGGCCGAAGCAG 418
consensus_8538#2      -CTCAACACGGAGCA----GG-GCTTCCCGGTGTT-TGC--AACGGTGCTGATC-GCGAA 394
consensus_8538#5      CCTCAACACGGCACGC-ACGG-GCTTCCCGGTGTNCTGCCANNCGGTGCTGATCCGCGAA 397
consensus_8538#1      CTGCTACTGGTGCTGCTATCACTACTGTCGCTGCTGCTACTGCTGCCGCTGCTATCGTCA 785
                           *   *                                  *  *  *         

consensus_8538#0      TCGCTCTCGACCGGATCACTGCCGATCACGGTGCG-CCACATCGAGAGTG-TCATTCGTA 1231
consensus_8538#4      TCGCTCTCGACCGGATCACTGCCGATCACGGTGCG-CCACATCGAGAGTG-TCATTCGTA 464
consensus_8538#3      AGATGCGCCGGCGAGACCGTGATG-CCGGAGTGCA-CCGTGATCATCGCGATCTGTTCTA 476
consensus_8538#2      -CCATCT--GGTGG-TGAA-GG-----ACAGTAAG--CAGGTGGT---GGCCTCACTGAC 439
consensus_8538#5      ACCATCCTGGGTGGGTGAACGG-----ACAGCACAGCCAGGTGGGTAGGCCCTCACTGAC 452
consensus_8538#1      CTGCTGTCGGATGTATCGTCGG-----ATGCTGCC--TTTTTCTTAGTCTCCCCACCGGA 838
                                  *       *                                       

consensus_8538#0      TGTCGGAAGCCCACG-CCCGGATG--CATCT-GCGCGACAC-GGTGC--AGGACGTGGAC 1284
consensus_8538#4      TGTCGGAAGCCCACG-CCCGGATG--CATCT-GCGCGACAC-GGTGC--AGGACGTGGAC 517
consensus_8538#3      CGACAAGAGCGACGA-CGAAGACGA-TATCCCGCGGGCCAA-AAGGC--GTGCCGCTGAA 531
consensus_8538#2      CGACGAG---GACA--TTTCGACAA---TCCAGCG-TCTGA-GCCGC--GATCCGCG--C 485
consensus_8538#5      CGACCGACGCGACACTTNTCGACNAGTTCCNNGCGCTCTGAAGCCGCT-GATCCGCCGCC 511
consensus_8538#1      CGACGGTTTTGTGCTGTTTTTTATTGCATCCGATGATTCTTTAGTTCCCGTTGCGGCATC 898
                       * *                         *    *           *      **     

consensus_8538#0      GTGAACATGGCCATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTA 1344
consensus_8538#4      GTGAACATGGCTATCCGCATGATGCTGGAAAGCTTTATCGAGGCGCAAAAGTTCAGCGTA 577
consensus_8538#3      AAGGCTGCCGAAATCGGAGCCGAAACAGAAACCGATGCCGAGATGGTGGAATCAATCGAA 591
consensus_8538#2      ATCAGCGATCGCATC-ACGCAGA--GCATGG-CACCGTCGATCTACGGTCACGAGTACAT 541
consensus_8538#5      ATCACCGANCGCATC-ACGCAACACGCATGGACACCGCCGACCAACGGCCACCAACCTAC 570
consensus_8538#1      ACCATTTTTGGAGCCAATTTTGT--TTAAATTCTTTTTCAACACCTGGGTACGGGATGAA 956
                                    *                 *     * *                   

consensus_8538#0      A----TGAAGAAGATGCGCGCCAC--CTTCCAGAAGTACCTGTCGTTCCAGCGCGATCAT 1398
consensus_8538#4      A----TGAAGAAGATGCGCGCCAC--CTTCCAGAAGTACCTGTCGTTCCAGCGCGACCAT 631
consensus_8538#3      AACCTCGAGGACACAAAGGGCCACAGCATCAAGGAGTGGGTGTCAATGTTGGGCCCACGG 651
consensus_8538#2      -CAAGCGAGGGCTA-GCGC-TGTGTCTGTTCGGGGGCGAATCGAAGAACCCGGGCAACAA 598
consensus_8538#5      ACATACAACGCCGG-ACGCGCGCTAGCCNCCCGCAGCTCTCGCCCCCGCCCCCCCACTCN 629
consensus_8538#1      -----CGATGGAGATACTTTCGTTTGCCTT----GGCATTCGTAGCTCCAGTGCCCAAAT 1007
                             * *                         *                        

consensus_8538#0      TCGGAGCTGCTG----TTCTTCATTCTTCGCCAGCTCACGCTCGACCAGCTGGCGTACCA 1454
consensus_8538#4      TCGGAGTTGCTG----TACTTCATTCTTCGCCAGCTCAC--------------------- 666
consensus_8538#3      ACAGAGATTTCGAA-CCGCTTCAATAGCTTCTTGCGCAC--------------------- 689
consensus_8538#2      GCACAAAATCCGCGGCGATATCAACATTCTGCTGTGCGGTGATCCGGGAAACGGCCAAGT 658
consensus_8538#5      CCACAAACCC-------------------------------------------------- 639
consensus_8538#1      TCCAAACATTTC---TGACACCGTATTCCTTTGGGAAATGCAGCCGCTAGTTTCGCTTCT 1064
                       *  *                                                       

consensus_8538#0      GCGCTGCAAGGAGGCCGGACGGCGGGGTAAGCAGGCGGAGGGTGAGCGGCCCCGAACCAC 1514
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      CCCAGTTCTTGAAGTACACGGAAAAGATTGCACCGCGGGCAGTGTTTACCACGGGCCAGG 718
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      TTCTGTTTAAGAGCTAGCTTTTGTGCGCCGAGATGC--ATTTTGAACGATTCTGACTGTG 1122
                                                                                  

consensus_8538#0      CGTGGTCGAGGTGATGGAGCGGGATCTGTCCGAGCGGGCGAAGGCGATCGACATTTTCAA 1574
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      GGTGCTTTCGGCGGTCGGGTTAACGGGCGTACGTACGGCGCAACCCAACGACGCGCGAGT 778
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      CTCGATACGCTCGTTTTTTTGTTGTCTTGCCGGCAAGCACGGAATATCCTAAATTTTCAT 1182
                                                                                  

consensus_8538#0      CCTGAAACCATTCCTCGAAAGCGAACTGTTCCGACAGAATGGGTTCACCTACGACGCCAA 1634
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      GGACCCTCGAGGCGGGCGCCC--------------------------------------- 799
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      TTGGTAAACAA-CGTTTGCGCTTTTCCGATACACGACGACGAAGGCGACCATTCAGCCGG 1241
                                                                                  

consensus_8538#0      ACGTAAGGTGATCGTCCAGGTGGTTCCGGAAGCAGCCGAGCCGTAGAGTTCATTCTTTCT 1694
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      GCGCAACTAGCTTTAAGTCGGCTAAAGTTTATTAAGCGTTTACACCATTATTTCTTTTAC 1754
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      ACATTTTCTCATTTTACGCTTTTGTACAATATGGTAAGGAATACTTTACGAATAATAAAT 1814
consensus_8538#4      ------------------------------------------------------------
consensus_8538#3      ------------------------------------------------------------
consensus_8538#2      ------------------------------------------------------------
consensus_8538#5      ------------------------------------------------------------
consensus_8538#1      ------------------------------------------------------------
                                                                                  

consensus_8538#0      GTGTGTTGTGTGTGACATCCTGACATTATAAAAACAAAAAAAGAAAAA 1862
consensus_8538#4      ------------------------------------------------
consensus_8538#3      ------------------------------------------------
consensus_8538#2      ------------------------------------------------
consensus_8538#5      ------------------------------------------------
consensus_8538#1      ------------------------------------------------
                                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)