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Anopheles gambiae
cluster # 8545 cluster # 8545       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8545#0 length = 764 sequences # 6  
consensus_8545#1 length = 758 sequences # 1  
consensus_8545#2 length = 696 sequences # 1  
consensus_8545#3 length = 688 sequences # 2  
consensus_8545#4 length = 653 sequences # 1  

consensusID : consensus_8545#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 764
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAGGATGTTGACGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAA-ACT-GTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGAGGATATTCATTGTTTATTCAATTAAAAATCTGTGCTCGATAGGATTAACAATATACGTATAATAAAATAGTTAAA]

[+] EMBL BM656154             [CCGCCCACGCGTCCGCCCACGCGTCCGAGGATGTTGACGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAA ACT GGTGCGC                                                                                                                                            ]
[+] EMBL BM585553             [                        CCG GGATGTTGACGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAGACTGGTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGAGGA                                                                        ]
[+] EMBL BM657162             [                                    cCGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCC AAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAA ACT GTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGAGGATATTCATTGTTTATTCAATTAAAAATCTGTGCTCGATAGGATTAACAA                        ]
[+] EMBL BM587217             [                                   ccgGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAA ACT GTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGAGGATATTCATTGTTTATTCAATTAAAAATCTGTGCTC                                      ]
[+] EMBL BX627269             [                                                                     GAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGATGATTTTGATCGCATCGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTG                                                                                                                                                                                          ]
[+] EMBL BX626520             [                                                                                            ATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAA ACT GTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGANGATATTCATTGTTTATTCAATTAAAAATCTGTGCTCGATAGGATTAACAATATACGTATAATAAAATAGTTAAA]


>consensus_8545#0 CCGCCCACGCGTCCGCCCACGCGTCCGAGGATGTTGACGCTTAAGTATCTCTCCATAAGA CCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCA ACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGT ACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAAC TTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGT TTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAA ATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGT GACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAG ACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTT TTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGC TTTTATTTGACGAAACTGTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGA CAAGTTAAAGAAACCCGCACAGCATAAGAGGATATTCATTGTTTATTCAATTAAAAATCT GTGCTCGATAGGATTAACAATATACGTATAATAAAATAGTTAAA



consensusID : consensus_8545#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 758
fasta sequence
                              [GCGGTTATATCTCTCCATAAGACCGTACTTCGAGACGGCCAGTTAAGCAATCGAATGGGATAAGCTCCAAAGAAATGATTGCAACTGTGAAACAATTTACACGATGATTTTGATACGCATCGTACTAGCACAAGGACATACTACCGTACCTATACTATATACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTNTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGACAGCAATCGTCGCTACCGATCCGTATGGTTTNTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTAGCTAGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACAGACAAGACGTAACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTNNGCGGATGCTTGTTNNCGCCGGACAGCTGGACGAATGGATCGCATCGGGTATTCGCGTCANATAATGGAACAGAGCTATATACTTCTGACGAAACTGTAAGCAGCAGAAATCATCTACTATAATACGGGATATAGGATTCTAGGACCAACGTCCACCGGACAACCCCGGANACAGACATAAGNAGGCATATCATCCGCTACTACTTTCCANTCTCACCCCCTCCTTGCTGGCTCCGANACNCGCTCNACCACACT]

[+] EMBL AL694954             [GCGGTTATATCTCTCCATAAGACCGTACTTCGAGACGGCCAGTTAAGCAATCGAATGGGATAAGCTCCAAAGAAATGATTGCAACTGTGAAACAATTTACACGATGATTTTGATACGCATCGTACTAGCACAAGGACATACTACCGTACCTATACTATATACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTNTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGACAGCAATCGTCGCTACCGATCCGTATGGTTTNTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTAGCTAGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACAGACAAGACGTAACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTNNGCGGATGCTTGTTNNCGCCGGACAGCTGGACGAATGGATCGCATCGGGTATTCGCGTCANATAATGGAACAGAGCTATATACTTCTGACGAAACTGTAAGCAGCAGAAATCATCTACTATAATACGGGATATAGGATTCTAGGACCAACGTCCACCGGACAACCCCGGANACAGACATAAGNAGGCATATCATCCGCTACTACTTTCCANTCTCACCCCCTCCTTGCTGGCTCCGANACNCGCTCNACCACACT]


>consensus_8545#1 GCGGTTATATCTCTCCATAAGACCGTACTTCGAGACGGCCAGTTAAGCAATCGAATGGGA TAAGCTCCAAAGAAATGATTGCAACTGTGAAACAATTTACACGATGATTTTGATACGCAT CGTACTAGCACAAGGACATACTACCGTACCTATACTATATACTACTACCTGCAAGAGATT CGCTTTCGCATTATTGATATTTNTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAA GACAGCAATCGTCGCTACCGATCCGTATGGTTTNTCCGATGCCCGAACCGGCAAAGAAGA GCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGT GCTACAAGGAGAAGTTTCCGTTGGTTTAGCTAGTGACGATCAGTTCCGTACATTGGCCGC ACTGCGACTGCACTACTACGCGGTACACAGACAAGACGTAACCTCTTGCCTGCCACCAGG TGTGAGATGAAAGCGGCTATGTNNGCGGATGCTTGTTNNCGCCGGACAGCTGGACGAATG GATCGCATCGGGTATTCGCGTCANATAATGGAACAGAGCTATATACTTCTGACGAAACTG TAAGCAGCAGAAATCATCTACTATAATACGGGATATAGGATTCTAGGACCAACGTCCACC GGACAACCCCGGANACAGACATAAGNAGGCATATCATCCGCTACTACTTTCCANTCTCAC CCCCTCCTTGCTGGCTCCGANACNCGCTCNACCACACT



consensusID : consensus_8545#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 696
fasta sequence
                              [CCGCCCACGCGTCCGGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATCGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGCGACGATCAGTTCCGTACATTGGCTGCACTGAGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGTTGCGCAGAATCATCTCTATTATACGGGATTAGGATTCTGGACAAGTTAAAGAAATCCGCACAGCATAAGAGGATATTCATTGTTTATTCAATTAAAAATG]

[+] EMBL BM587710             [CCGCCCACGCGTCCGGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATCGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGCGACGATCAGTTCCGTACATTGGCTGCACTGAGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGTTGCGCAGAATCATCTCTATTATACGGGATTAGGATTCTGGACAAGTTAAAGAAATCCGCACAGCATAAGAGGATATTCATTGTTTATTCAATTAAAAATG]


>consensus_8545#2 CCGCCCACGCGTCCGGCTTAAGTATCTCTCCATAAGACCGTACTTCGAGACGGCCCAGGA AGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGA TTTCGATCGCATCGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCA AGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGA ACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAA GAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGT GAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGCGACGATCAGTTCCGTACATTGGC TGCACTGAGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAG GTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATG GATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGTTGCG CAGAATCATCTCTATTATACGGGATTAGGATTCTGGACAAGTTAAAGAAATCCGCACAGC ATAAGAGGATATTCATTGTTTATTCAATTAAAAATG



consensusID : consensus_8545#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence
                              [TCTCTCCATAAGACCGNACTTCGAGACGGCCCAAGAAGCAATCGAATGGGATAAGGTGGGAACTGTTGACTGTAAGCTCTTTCTGTGGACATAATTTATCCTGCCAGCGTGTATCTTTCCATCTCGTGTAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATCGTACTACACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGNTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGG]

[+] EMBL BX626173             [TCTCTCCATAAGACCGNACTTCGAGACGGCCCAAGAAGCAATCGAATGGGATAAGGTGGGAACTGTTGACTGTAAGCTCTTTCTGTGGACATAATTTATCCTGCCAGCGTGTATCTTTCCATCTCGTGTAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATCGTACTACACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGNTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGG]
[+] EMBL BX622403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCACGTGTGANATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACTAATGGATCCCATCGGGTATTGCGTCCANTAATGGTNTGTGCTTTTATTTGACGAA                                             ]


>consensus_8545#3 TCTCTCCATAAGACCGNACTTCGAGACGGCCCAAGAAGCAATCGAATGGGATAAGGTGGG AACTGTTGACTGTAAGCTCTTTCTGTGGACATAATTTATCCTGCCAGCGTGTATCTTTCC ATCTCGTGTAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATC GCATCGTACTACACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTC GCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGC CAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCA AACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCT ACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGC GACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGA TGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCAT CGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGNTGCGCAGAATCA TCTCTATTATACGGTATTAGGATTCTGG



consensusID : consensus_8545#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 653
fasta sequence
                              [CCGCGGACGCGTGGGGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGAGGATATTCATTGGTTATTCAATTAAAAAT]

[+] EMBL BM619132             [CCGCGGACGCGTGGGGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGTGAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTTCTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGCCATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCCGATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGATCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTACCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCGCGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTATTTGACGAAACTGTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGTTAAAGAAACCCGCACAGCATAAGAGGATATTCATTGGTTATTCAATTAAAAAT]


>consensus_8545#4 CCGCGGACGCGTGGGGGAAGCAATCGAATGGGATAAGCTCCAAAAAATGATTGCAACTGT GAAACAATTTCACGACGATTTCGATCGCATTGTACTGCACAAGGACATCTACCGTACCTT CTATTACTACTACCTGCAAGAGATTCGCTTTCGCATTATTGATATTTTGATGAACTTTGC CATAATCGAGTGGTGTGAACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTTCC GATGCCCGAACCGGCAAAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCC AGACTATACGATACGCGTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTGCTGTGACGA TCAGTTCCGTACATTGGCCGCACTGCGACTGCACTACTACGCGGTACACGACAAGACGTA CCTCTTGCCTGCCACCAGGTGTGAGATGAAAGCGGCTATGTTGCGGATGCTTGTTTTTCG CGGACAGCTGGACGAATGGATCGCATCGGGTATTGCGTCCAATAATGGTTTGTGCTTTTA TTTGACGAAACTGTTGCGCAGAATCATCTCTATTATACGGTATTAGGATTCTGGACAAGT TAAAGAAACCCGCACAGCATAAGAGGATATTCATTGGTTATTCAATTAAAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8545#0      --------------------------CCGCCCACGCGTCCGCCCACGCGTCCGAGGATGT 34
consensus_8545#2      --------------------------------------CCGCCCACGCGTCCG------- 15
consensus_8545#4      ------------------------------------------------------------
consensus_8545#1      ------------------------------------------------------------
consensus_8545#3      TCTCTCCATAAGACCGNACTTCGAGACGGCCCAAGAAGCAATCGAATGGGATAAGGTGGG 60
                                                                                  

consensus_8545#0      TGACGCTTA-AGTAT-CTCTCCATAAGACCGTACTTCGAGACGGC-CCAGGAAGCAATCG 91
consensus_8545#2      ----GCTTA-AGTAT-CTCTCCATAAGACCGTACTTCGAGACGGC-CCAGGAAGCAATCG 68
consensus_8545#4      ---------------------------------CCGCGGACGCGT-GGGGGAAGCAATCG 26
consensus_8545#1      ----GCGGT-TATAT-CTCTCCATAAGACCGTACTTCGAGACGGC-CAGTTAAGCAATCG 53
consensus_8545#3      AACTGTTGACTGTAAGCTCTTTCTGTGGACATAATTTATCCTGCCAGCGTGTATCTTTCC 120
                                                                          * *  ** 

consensus_8545#0      AATGGGATAAGCTCCAAA-AAATGATTGCAACTGTGAAACAATTT-CACGACGATTTCGA 149
consensus_8545#2      AATGGGATAAGCTCCAAA-AAATGATTGCAACTGTGAAACAATTT-CACGACGATTTCGA 126
consensus_8545#4      AATGGGATAAGCTCCAAA-AAATGATTGCAACTGTGAAACAATTT-CACGACGATTTCGA 84
consensus_8545#1      AATGGGATAAGCTCCAAAGAAATGATTGCAACTGTGAAACAATTTACACGATGATTTTGA 113
consensus_8545#3      ATCTCGTGTAGCTCCAAA-AAATGATTGCAACTGTGAAACAATTT-CACGACGATTTCGA 178
                      *    *   ********* ************************** ***** ***** **

consensus_8545#0      T-CGCATTGTACT-GCACAAGGACAT-CTACCGTACCTT--CTAT-TACTACTACCTGCA 203
consensus_8545#2      T-CGCATCGTACT-GCACAAGGACAT-CTACCGTACCTT--CTAT-TACTACTACCTGCA 180
consensus_8545#4      T-CGCATTGTACT-GCACAAGGACAT-CTACCGTACCTT--CTAT-TACTACTACCTGCA 138
consensus_8545#1      TACGCATCGTACTAGCACAAGGACATACTACCGTACCTATACTATATACTACTACCTGCA 173
consensus_8545#3      T-CGCATCGTACT-ACACAAGGACAT-CTACCGTACCTT--CTAT-TACTACTACCTGCA 232
                      * ***** *****  *********** ***********   **** **************

consensus_8545#0      AGAGATTCGCTTTCGCATTATTGATATTTT-GATGAACTTTGCCATAATCGAGTGGTGTG 262
consensus_8545#2      AGAGATTCGCTTTCGCATTATTGATATTTT-GATGAACTTTGCCATAATCGAGTGGTGTG 239
consensus_8545#4      AGAGATTCGCTTTCGCATTATTGATATTTT-GATGAACTTTGCCATAATCGAGTGGTGTG 197
consensus_8545#1      AGAGATTCGCTTTCGCATTATTGATATTTNTGATGAACTTTGCCATAATCGAGTGGTGTG 233
consensus_8545#3      AGAGATTCGCTTTCGCATTATTGATATTTT-GATGAACTTTGCCATAATCGAGTGGTGTG 291
                      *****************************  *****************************

consensus_8545#0      AACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTT-CCGATGCCCGAACCGGCA 321
consensus_8545#2      AACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTT-CCGATGCCCGAACCGGCA 298
consensus_8545#4      AACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTT-CCGATGCCCGAACCGGCA 256
consensus_8545#1      AACCGAAGACAGCAATCGTCGCTACCGATCCGTATGGTTTNTCCGATGCCCGAACCGGCA 293
consensus_8545#3      AACCGAAGCCAGCAATCGTCGCTACCGATCCGTATGGTTTT-CCGATGCCCGAACCGGCA 350
                      ******** *******************************  ******************

consensus_8545#0      AAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGC 381
consensus_8545#2      AAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGC 358
consensus_8545#4      AAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGC 316
consensus_8545#1      AAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGC 353
consensus_8545#3      AAGAAGAGCAAACGGCGAAAGGACGACGAACCGGCAGAAATCCCAGACTATACGATACGC 410
                      ************************************************************

consensus_8545#0      GTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTT-GCT-GTGACGATCAGTTCCGTACAT 439
consensus_8545#2      GTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTT-GCT-GCGACGATCAGTTCCGTACAT 416
consensus_8545#4      GTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTT-GCT-GTGACGATCAGTTCCGTACAT 374
consensus_8545#1      GTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTTAGCTAGTGACGATCAGTTCCGTACAT 413
consensus_8545#3      GTGAAGTGCTACAAGGAGAAGTTTCCGTTGGTTT-GCT-GTGACGATCAGTTCCGTACAT 468
                      ********************************** *** * *******************

consensus_8545#0      TGGCCGCACTGCGACTGCACTACTACGCGGTACAC-GACAAGACGTA-CCTCTTGCCTGC 497
consensus_8545#2      TGGCTGCACTGAGACTGCACTACTACGCGGTACAC-GACAAGACGTA-CCTCTTGCCTGC 474
consensus_8545#4      TGGCCGCACTGCGACTGCACTACTACGCGGTACAC-GACAAGACGTA-CCTCTTGCCTGC 432
consensus_8545#1      TGGCCGCACTGCGACTGCACTACTACGCGGTACACAGACAAGACGTAACCTCTTGCCTGC 473
consensus_8545#3      TGGCCGCACTGCGACTGCACTACTACGCGGTACAC-GACAAGACGTA-CCTCTTGCCTGC 526
                      **** ****** *********************** *********** ************

consensus_8545#0      CACCAGGTGTGAGATGAAAGCGGCTATGTTG-CGGATGCTTGTTTTTCGCGGACAGCTGG 556
consensus_8545#2      CACCAGGTGTGAGATGAAAGCGGCTATGTTG-CGGATGCTTGTTTTTCGCGGACAGCTGG 533
consensus_8545#4      CACCAGGTGTGAGATGAAAGCGGCTATGTTG-CGGATGCTTGTTTTTCGCGGACAGCTGG 491
consensus_8545#1      CACCAGGTGTGAGATGAAAGCGGCTATGTNNGCGGATGCTTGTTNNCGCCGGACAGCTGG 533
consensus_8545#3      CACCAGGTGTGAGATGAAAGCGGCTATGTTG-CGGATGCTTGTTTTTCGCGGACAGCTGG 585
                      *****************************   ************     ***********

consensus_8545#0      ACGAATGGATCGCATCGGGTATT-GCGTCCAATAATGGTTTGTGCTTTTAT----TTGAC 611
consensus_8545#2      ACGAATGGATCGCATCGGGTATT-GCGTCCAATAATGGTTTGTGCTTTTAT----TTGAC 588
consensus_8545#4      ACGAATGGATCGCATCGGGTATT-GCGTCCAATAATGGTTTGTGCTTTTAT----TTGAC 546
consensus_8545#1      ACGAATGGATCGCATCGGGTATTCGCGTCANATAATGGAACAGAGCTATATACTTCTGAC 593
consensus_8545#3      ACGAATGGATCGCATCGGGTATT-GCGTCCAATAATGGTTTGTGCTTTTAT----TTGAC 640
                      *********************** *****  *******        * ***     ****

consensus_8545#0      GAAACTGTTGC--GCAGAA-TCATCT-CTATTATACGGTAT-TAGGATTCT-GGACAAGT 665
consensus_8545#2      GAAACTGTTGC--GCAGAA-TCATCT-CTATTATACGGGAT-TAGGATTCT-GGACAAGT 642
consensus_8545#4      GAAACTGTTGC--GCAGAA-TCATCT-CTATTATACGGTAT-TAGGATTCT-GGACAAGT 600
consensus_8545#1      GAAACTGTAAGCAGCAGAAATCATCTACTATAATACGGGATATAGGATTCTAGGACCAAC 653
consensus_8545#3      GAAACTGNTGC--GCAGAA-TCATCT-CTATTATACGGTAT-TAGGATTCTGG------- 688
                      *******      ****** ****** **** ****** ** ********* *       

consensus_8545#0      ------TAAAGAAACCCGCACA---GCATAAGAGGATAT-TCATTGTTTATTCAATTAAA 715
consensus_8545#2      ------TAAAGAAATCCGCACA---GCATAAGAGGATAT-TCATTGTTTATTCAATTAAA 692
consensus_8545#4      ------TAAAGAAACCCGCACA---GCATAAGAGGATAT-TCATTGGTTATTCAATTAAA 650
consensus_8545#1      GTCCACCGGACAACCCCGGANACAGACATAAGNAGGCATATCATCCGCTACTACTTTCCA 713
consensus_8545#3      ------------------------------------------------------------
                                                                                  

consensus_8545#0      AATCTGTGCTCGATAGGATTAACAATATACGTATAATAAAATAGTTAAA 764
consensus_8545#2      AATG--------------------------------------------- 696
consensus_8545#4      AAT---------------------------------------------- 653
consensus_8545#1      NTCTCACCCCCTCCTTGCTGGCTCCGANACNCGCTCNACCACACT---- 758
consensus_8545#3      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)