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Anopheles gambiae
cluster # 8546 cluster # 8546       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8546#0 length = 1188 sequences # 6  
consensus_8546#1 length = 627 sequences # 1  
consensus_8546#2 length = 595 sequences # 2  
consensus_8546#3 length = 582 sequences # 2  

consensusID : consensus_8546#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1188
fasta sequence
                              [TAATTTATTTTTCATGTTCAATTAGTGCACCTTGCCCGGGGTACGTGCACATGAAAAGCACAAATGCGTAGCG-TAAACCACAAACAAACATAATAATGATTCGAATGAGAGATGGAAAGCATCAAAAATAAAAACG-TTGTCTTTTGCACAACAAGCGCGCGCGCTTTGTGGTTTTTAAGAAACAAATGATACGTTATGCGCACCTCTTAAAGTTTGCG-TGTGCTGTTAAG-TTCTTCTCTCTTTTGACCTGGCATAATTGC-AAAACACAATTGATGGATGATTGGTTGGGATGGGTTGGTAGACCGAAACAAAAAAGCGCGGACAATCGTTGCCAACGCACGTTAGGCGGCGGATAATAGCCGACGGCGC-A-CT-CCTCGATGAACGTGTCTAGGGCGACCTCTTCCTCCTTGCGGGTGGCAATCTCGCGCA-C-TTG-ACGACACCGCGCGACAGCTCGCCATCGCCGAGTATGACCGCGTACGGGATCTGGTACTCCTCGCAGTGCTGCAGCTGGGCCAGCAGCTTCGGGTTGAGCTTGTACGAGTGTTCCGCCTTGAGGCCGGCCGACCACAGCTTGTTGAGTATTTCGAGCCGCTTCAGGTGCAGACCCTTGTGGGCGGACGCGACGTACACCTCCGTCTCGTTGGTGCGCGTTTTGCCGCCGGCCCGCGCCTCAAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGGCACCTGCTTGCG-TTTTGGGTTGAACATGCCGACCAGATTGTCGTACCGACCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCACCGCCCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCAGGCTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGCCGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCTGCGCAGCGTCTCGTCCGCCGCCAGCCGCTCGATCAGCTCGGTGCCGCCGTGCAGCGTCACGAACTGCCCGATCCGCCCGACCGCCTCCTCCGACAGCCCCTTCTCCTCCACCATCTCGCGCCGCACCTCCTCCCAGGGCGTCTTGTCCAGCTTGTCGACCGAGGAGAAGGCGGTGCGGAACTTGTCCGCCGGCAC]

[+] EMBL CNS08UXT             [TAATTTATTTTTCATGTTCAATTAGTGCACCTTGCCCGGGGTACGTGCACATGAAAAGCACAAATGCGTAGCG TAAACCACAAACAAACATAATAATGATTCGAATGAGAGATGGAAAGCATCAAAAATAAAAACG TTGTCTTTTGCACAACAAGCGCGCGCG TTTGTGGTTTTTAAGAAACAAATGATACGTTATGCGCACCTCTTAAAGTTTGCG TGTGCTGTTAAG TTCTTCTCTCTTTTGACCTGGCATAATTGCAAAAACACAATTGATtgttta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09CRF             [             ATGTTCAATTAGTGCACCTTGCCCGGGGCACGTGCACATGAAAAGCACAAATGCGTCGCGCTAAACCACAAACAAACATAATAATGATTCGAATGAGAGATGGAAAGCATCAAAAATAAAAACGCTTGTCTTTTGCACAACAAGCGCGCGCGCTTTGTGGTTTTTAAGAAACAAATGATACGTTATGCGCACCTCTTAAAGTTTGCGCTGTGCTGTTAAGCTTCTTCTCTCTTTTGACCTGGCATAATTGC AAAACACAATTGATGGATGATTGGTTGGGATGGGTTGGTAGACCGAAACAAAAAAGCGCGGACAATCGTTGCCAACGCACGTTAGGCGGCGGATAATAGCCGACGGCGC A CTCCCTCGATGAACGTGTCTAGGGCGACCTCTTCCTCCTTGCGGGTGGCAATCTCGCGCA C TTGCACGACACCGCGCGACACCTCGCCATCGCCGAGTATGACCGCGTACGGGATCTGGTACTCCTCGCAGTGCTGCAGCTGGGCCAGCAGCTTCGGGTTGAGCTTGTACGAGTGTTCCGCCTTGAGGCCGGCCGACCACAGCTTGTTGAGTATTTCGAGCCGCTTCAGGTGCAGACCCTTGTGGGCGGACGCGACGTACACCTCCGTCTCGTTGGTGCGCGTTTTGCCGCCGGCCCGCGCCTCCAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGGCACCTGCTTGCGCTTTTGGGTTGAACATGCCGACCAGATTATCGTACCGGCCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCACCGCCCCCGAGCAGGACC                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08EWG             [                                                                                                                                              CTTTTGCACAACAAGCGCGCGCGCTTTGTGGTTTTTAAGAAACAAATGATACGTTATGCGCACCTCTTAAAGTTTGCG TGTGCTGTTAAG TTCTTCTCTCTTTTGACCTGGCATAATTGC AAAACACAATTGATGGATGATTGGTTGGGATGGGTTGGTAGACCGAAACAAAAAAGCGCGGACAATCGTTGCCAACGCACGTTAGGCGGCGGATAATAGCCGACGGCGCAA CT CCTCGATGAACGTGTCTAGGGCGACCTCTTCCTCCTTGCGGGTGGCAATCTCGCGCA CTTTG ACGACACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BX620444             [                                                                                                                                                                                               TACGTTATGCGCNCNTCTTAAAGTTTGCG TGTGCTGTTAAG TTCTTCTCTCTTTTGACCTGGCATAATTGC AAAACACGATTGATGNATGATTGGTTGGGATGGGTTGGTAGACCGAAACAAAAAAGCGCGGACAATCGTTGCCTTCGCACGTTAGGCGGCGGATAATAGCCGACGGCGC AGCT CCTCGATGAACGTGTCCAGGGCGACCTCTTCCTCCTTGCGGGTGGCAATCTCGCGCAGC TTG ACGACACCGCGCGACAGCTCGCCATCGCCGAGTATGACCGCGTACGGGATCTGGTACTCCTCGCAGTGCTGCAGCTGGGCCAGCAGCTTCGGGTTGAGCTTGTACGAGTGTTCCGCCTTGAGGCCGGCCGACCACAGCTTGTTGAGTATTTCGAGCCGCTTCAGGTGCAGACCCTTGTGGGCGGACGCGACGTACACCTCCGTCTCGTTGGTGCGCGTTTTGCCGCCGGCCCGCGCCTCAAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGGCACCTGCTTGCG TTTTGGGTTGAACATGCCGACCAGATTGTCGTACCGACCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCACCGCCCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCAGGCTCAGA                                                                                                                                                                                                                                                                                               ]
[-] EMBL BX609171             [                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCGCGCAGC TTG ACGACACCGCGCGACAGCTCGCCATCGCCGAGTATGACCGCGTACGGGATCTGGTACTCCTCGCAGTGCTGCAGCTGGGCCAGCAGCTTCGGGTTGAGCTTGTACGAGTGTTCCGCCTTGAGGCCGGCCGACCACAGCTTGTTGAGTATTTCGAGCCGCTTCAGGTGCAGACCCTTGTGGGCGGACGCGACGTACACCTCCGTCTCGTTGGTGCGCGTTTTGCCGCCGGCCCGCGCCTCAAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGGCACCTGCTTGCG TTTTGGGTTGAACATGCCGACCAGATTGTCGTACCGACCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCACCGCCCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCAGGCTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGCCGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCTGCGCAGCGTCTCGTCCGCCGCCAGCCGCTCGATCAGCTCGGTGCCGCCGTGCAGCGTCACGAACTGCCCGATCCGCCCGACCGCCTCCTCCGACAGCCCCTTCTCCTCCACCATCTCGCGCCGCACCTCCTCCCAGGGCGTCTTGTCCAGCTTGTCGACCGAGGAGAAGGCGGTGCGGAACTTGTCCGCCGGCAC]
[-] EMBL BX618476             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTCGTACCGACCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCCCCGCCCCCGAGCAGGACCGCCTCGT TTCCACGCCGGTGTAGTAGTCCCGCCCGCGGGCCCGG                                                                                                                                                                                                                                                                                                     ]


>consensus_8546#0 TAATTTATTTTTCATGTTCAATTAGTGCACCTTGCCCGGGGTACGTGCACATGAAAAGCA CAAATGCGTAGCGTAAACCACAAACAAACATAATAATGATTCGAATGAGAGATGGAAAGC ATCAAAAATAAAAACGTTGTCTTTTGCACAACAAGCGCGCGCGCTTTGTGGTTTTTAAGA AACAAATGATACGTTATGCGCACCTCTTAAAGTTTGCGTGTGCTGTTAAGTTCTTCTCTC TTTTGACCTGGCATAATTGCAAAACACAATTGATGGATGATTGGTTGGGATGGGTTGGTA GACCGAAACAAAAAAGCGCGGACAATCGTTGCCAACGCACGTTAGGCGGCGGATAATAGC CGACGGCGCACTCCTCGATGAACGTGTCTAGGGCGACCTCTTCCTCCTTGCGGGTGGCAA TCTCGCGCACTTGACGACACCGCGCGACAGCTCGCCATCGCCGAGTATGACCGCGTACGG GATCTGGTACTCCTCGCAGTGCTGCAGCTGGGCCAGCAGCTTCGGGTTGAGCTTGTACGA GTGTTCCGCCTTGAGGCCGGCCGACCACAGCTTGTTGAGTATTTCGAGCCGCTTCAGGTG CAGACCCTTGTGGGCGGACGCGACGTACACCTCCGTCTCGTTGGTGCGCGTTTTGCCGCC GGCCCGCGCCTCAAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGG CACCTGCTTGCGTTTTGGGTTGAACATGCCGACCAGATTGTCGTACCGACCGCCGCCCGC CACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCACCGCCCCC GAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCAGGCTCAG ATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGCCGCAT GTCCTCCAGCCCCTCCATCGCCACCTTGATGCTGCGCAGCGTCTCGTCCGCCGCCAGCCG CTCGATCAGCTCGGTGCCGCCGTGCAGCGTCACGAACTGCCCGATCCGCCCGACCGCCTC CTCCGACAGCCCCTTCTCCTCCACCATCTCGCGCCGCACCTCCTCCCAGGGCGTCTTGTC CAGCTTGTCGACCGAGGAGAAGGCGGTGCGGAACTTGTCCGCCGGCAC



consensusID : consensus_8546#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence
                              [TTGCCGCCGGCCCGCGCCTCCAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGGCACCCTGTTGCGCTTTGGGTTGAACATGCCGACCAGATTATCGTACCGGCCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGTGCCGCCTCCTGCGCCACCGCCCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCAGGCTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGCCGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCCGCGCAGCGTCTCGTCCGCCGCCAGCCGCTCGATCAGCTCGGTGCCGTCATCGCTGCTGCACACTTTCTACCTTGTCGACCACGCGCGTGGCCACACGGGGGAAACCAAAACTACCGAAATGTGGCACCGATGGGAAATGGGAAAGAAGTGCGACCCTGGGGCAAGGGCACAGCGACCGCGCAACACGACCCGGCACCGGACTGTGTGTGAGTGAGAGTGTGCGTGTGCGTGTGGAAGGAAAGCGCGTTGTGTGCGGACGTACTACCGCTGCTGCCGACGCTGATGTC]

[-] EMBL CNS09CRE             [TTGCCGCCGGCCCGCGCCTCCAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCGACGCACGGCACCCTGTTGCGCTTTGGGTTGAACATGCCGACCAGATTATCGTACCGGCCGCCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGTGCCGCCTCCTGCGCCACCGCCCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCAGGCTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGCCGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCCGCGCAGCGTCTCGTCCGCCGCCAGCCGCTCGATCAGCTCGGTGCCGTCATCGCTGCTGCACACTTTCTACCTTGTCGACCACGCGCGTGGCCACACGGGGGAAACCAAAACTACCGAAATGTGGCACCGATGGGAAATGGGAAAGAAGTGCGACCCTGGGGCAAGGGCACAGCGACCGCGCAACACGACCCGGCACCGGACTGTGTGTGAGTGAGAGTGTGCGTGTGCGTGTGGAAGGAAAGCGCGTTGTGTGCGGACGTACTACCGCTGCTGCCGACGCTGATGTC]


>consensus_8546#1 TTGCCGCCGGCCCGCGCCTCCAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCCG ACGCACGGCACCCTGTTGCGCTTTGGGTTGAACATGCCGACCAGATTATCGTACCGGCCG CCGCCCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGTGCCGCCTCCTGCGCCAC CGCCCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCCGCGGGCCA GGCTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCA GCCGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCCGCGCAGCGTCTCGTCCGCCG CCAGCCGCTCGATCAGCTCGGTGCCGTCATCGCTGCTGCACACTTTCTACCTTGTCGACC ACGCGCGTGGCCACACGGGGGAAACCAAAACTACCGAAATGTGGCACCGATGGGAAATGG GAAAGAAGTGCGACCCTGGGGCAAGGGCACAGCGACCGCGCAACACGACCCGGCACCGGA CTGTGTGTGAGTGAGAGTGTGCGTGTGCGTGTGGAAGGAAAGCGCGTTGTGTGCGGACGT ACTACCGCTGCTGCCGACGCTGATGTC



consensusID : consensus_8546#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 595
fasta sequence
                              [CCGCCCACGCGTCCGTGCCCCAGGGTCGCACTTCTTTCCCATTTCCCATCGGTGCCACATTTCGGTAGTTTTGGTTTCCCCCGTGTGGCCACGCGCGTGGTCGACAAGGTAGAAAGTGTGCAGCAGCGATGACGGCAAAGGATACGCTCGAGGCTGCCATCACCGCCCAGGGAGACGTGGTGCGGAAGCTGAAGTCGGCCGCCACGAAGGATAAGGCGAAGATCAACGAGGAGGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGTCGACGACGATGGCAGCGGCGAGACAGCAGCAGC-AACACCAGCGCCGGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCAACCTGTCGCTGAAAACGCCGAAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGTCCAACCAGGTGGGTGCGCGTGTTCCGCCGGCACGGCGCGGAAACGATCGACACGCCCGTGTTCGAGCTGAAGGAGGTGCTGACCGGGAAGTACGGCGAGGACTCGAAGCTGATCTACGACCTGAAGGACCAGGGCGGCGAGATACTGGCGCTCCGGTACG]

[+] EMBL BM616499             [CCGCCCACGCGTCCGTGCCCCAGGGTCGCACTTCTTTCCCATTTCCCATCGGTGCCACATTTCGGTAGTTTTGGTTTCCCCCGTGTGGCCACGCGCGTGGTCGACAAGGTAGAAAGTGTGCAGCAGCGATGACGGCAAAGGATACGCTCGAGGCTGCCATCACCGCCCAGGGAGACGTGGTGCGGAAGCTGAAGTCGGCCGCCACGAAGGATAAGGCGAAGATCAACGAGGAGGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGTCGACGACGATGGCAGCGGCGAGACAGCAGCAGC AACACCAGCGCCGGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCAACCTGTCGCTGAAAACGCCGAAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGTCCAACCAGGTGGGTGCGCGTGTTCCGCCGGCACGGCGCGGAAACGATCGACACGCCCGTGTTCGAGCTGAAGGAGGTGCTGACCGGGAAGTACGGCGAGGACTCGAAGCTGATCTACGACCTGAAGGACCAGGGCGGCGAGATACTGGCGCTCCGGTACG]
[+] EMBL CNS08EWF             [                                                                                                                                                                 ACCGCCCACGGAGACGTGGTGCGGAAGCTGAAGTCGGCCGCCACGAGGGATAAGGCGAAGATCAACGAGGAGGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGTCGACGACGATGGCAGCGGCGAGACAGCAGCAGCTAACACCAGCGCCGGGCAAATCAGCGATGGCCAGT                                                                                                                                                                                                                                                        ]


>consensus_8546#2 CCGCCCACGCGTCCGTGCCCCAGGGTCGCACTTCTTTCCCATTTCCCATCGGTGCCACAT TTCGGTAGTTTTGGTTTCCCCCGTGTGGCCACGCGCGTGGTCGACAAGGTAGAAAGTGTG CAGCAGCGATGACGGCAAAGGATACGCTCGAGGCTGCCATCACCGCCCAGGGAGACGTGG TGCGGAAGCTGAAGTCGGCCGCCACGAAGGATAAGGCGAAGATCAACGAGGAGGTCCAGA AGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGTCGACGACGATGGCAGCGGCG AGACAGCAGCAGCAACACCAGCGCCGGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACC GCAACCTGTCGCTGAAAACGCCGAAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGC TGCGGCAGCGCGTGTCCAACCAGGTGGGTGCGCGTGTTCCGCCGGCACGGCGCGGAAACG ATCGACACGCCCGTGTTCGAGCTGAAGGAGGTGCTGACCGGGAAGTACGGCGAGGACTCG AAGCTGATCTACGACCTGAAGGACCAGGGCGGCGAGATACTGGCGCTCCGGTACG



consensusID : consensus_8546#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 582
fasta sequence
                              [CCGGCCGGGGCTGCGGGTCTGTTTTGCTGGCCGCTCGTCGGGGATACCGCTCGTGTGCGAGCGCGACAGAAAGAGAGTACAATTGCGTCAGCAGCAGCACGAACGCGAGTGACGAAACGAAAGTGAAAGGAAAATCAGCAGAAAAGTGTGGCTCGAAAGTGCACTCCCGCCCGCGTTACAAAGCAAAGGGTTCTTGGGAGTGGGGCGGGAAGGGCATTGCACAATGCTGGCGAGACAATTGCTGCTCGGAGCCGGCTGCTCGTTGCGCCGGTTTTCCTCCGCCAGTCGGGGTGCGGTGGTGGTCAGCACGATGCAGGCAATACGGGCGGGCGAGGAGGACGTCCGGCAACGGCTCGCTCAGATCAACGAGGAGGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGTCGACGACGATGGCAGCGGCGAGACAGCAGCAGCAACACCAGCGCCGGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCAACCTGTCGCTGAAAACGCCGAAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGCTCGACCA]

[+] EMBL BM632601             [CCGGCCGGGGCTGCGGGTCTGTTTTGCTGGCCGCTCGTCGGGGATACCGCTCGTGTGCGAGCGCGACAGAAAGAGAGTACAATTGCGTCAGCAGCAGCACGAACGCGAGTGACGAAACGAAAGTGAAAGGAAAATCAGCAGAAAAGTGTGGCTCGAAAGTGCACTCCCGCCCGCGTTACAAAGCAAAGGGTTCTTGGGAGTGGGGCGGGAAGGGCATTGCACAATGCTGGCGAGACAATTGCTGCTCGGAGCCGGCTGCTCGTTGCGCCGGTTTTCCTCCGCCAGTCGGGGTGCGGTGGTGGTCAGCACGATGCAGGCAATACGGGCGGGCGAGGAGGACGTCCGGCAACGGCTCGCTCAGATCAACGAGGAGGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGTCGACGACGATGGCAGCGGCGAGACAGCAGCAGCAACACCAGCGCCGGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCAACCTGTCGCTGAAAACGCCGAAGGGCACG                                                  ]
[+] EMBL BM639848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCGCCGGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCAACCTGTCGCTGAAAACGCCGAAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGCTCGACCA]


>consensus_8546#3 CCGGCCGGGGCTGCGGGTCTGTTTTGCTGGCCGCTCGTCGGGGATACCGCTCGTGTGCGA GCGCGACAGAAAGAGAGTACAATTGCGTCAGCAGCAGCACGAACGCGAGTGACGAAACGA AAGTGAAAGGAAAATCAGCAGAAAAGTGTGGCTCGAAAGTGCACTCCCGCCCGCGTTACA AAGCAAAGGGTTCTTGGGAGTGGGGCGGGAAGGGCATTGCACAATGCTGGCGAGACAATT GCTGCTCGGAGCCGGCTGCTCGTTGCGCCGGTTTTCCTCCGCCAGTCGGGGTGCGGTGGT GGTCAGCACGATGCAGGCAATACGGGCGGGCGAGGAGGACGTCCGGCAACGGCTCGCTCA GATCAACGAGGAGGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGCTCACCGT CGACGACGATGGCAGCGGCGAGACAGCAGCAGCAACACCAGCGCCGGGCAAACCAGCGGC GGCCAGTGAACCCGGCAACCGCAACCTGTCGCTGAAAACGCCGAAGGGCACGCGCGACTA CGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGCTCGACCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      TAATTTATTTTTCATGTTCAATTAGTGCACCTTGCCCGGGGTACGTGCACATGAAAAGCA 60
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      CAAATGCGTAGCGTAAACCACAAACAAACATAATAATGATTCGAATGAGAGATGGAAAGC 120
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      ATCAAAAATAAAAACGTTGTCTTTTGCACAACAAGCGCGCGCGCTTTGTGGTTTTTAAGA 180
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      AACAAATGATACGTTATGCGCACCTCTTAAAGTTTGCGTGTGCTGTTAAGTTCTTCTCTC 240
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      TTTTGACCTGGCATAATTGCAAAACACAATTGATGGATGATTGGTTGGGATGGGTTGGTA 300
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      GACCGAAACAAAAAAGCGCGGACAATCGTTGCCAACGCACGTTAGGCGGCGGATAATAGC 360
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      CGACGGCGCACTCCTCGATGAACGTGTCTAGGGCGACCTCTTCCTCCTTGCGGGTGGCAA 420
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      TCTCGCGCACTTGACGACACCGCGCGACAGCTCGCCATCGCCGAGTATGACCGCGTACGG 480
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      ------------------------------------------CCGGCCGGGGCTGCGGGT 18
consensus_8546#0      GATCTGGTACTCCTCGCAGTGCTGCAGCTGGGCCAGCAGCTTCGGGTTGAGCTTGTACGA 540
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      ------------------------------------------------------------
consensus_8546#3      CTGTTTTGCTGGCCGCTCGTCGGGGATACCGCTCGTGTGCGAGCGCGACAGAAAGAGAGT 78
consensus_8546#0      GTGTTCCGCCTTGAGGCCGGCCGACCACAGCTTGTTGAGTATTTCGAGCCGCTTCAGGTG 600
consensus_8546#1      ------------------------------------------------------------
                                                                                  

consensus_8546#2      -----------------------------------------------------------C 1
consensus_8546#3      ACAATTGCGTCAGCAG--CAGCACGAACGCGAGTGACGAAACGAAAGTGAAAGGAAAATC 136
consensus_8546#0      CAGACCCTTGTGGGCGGACGCGACGTACACCTCCGTCTCGTTGGTGCGCGTTTTGCCGCC 660
consensus_8546#1      ----------------------------------------------------TTGCCGCC 8
                                                                                 *

consensus_8546#2      CGCCCACGCGTCCGTGCCCCAGGGTCGCACTTCTTTCC-CATTTCCCATC----GGTGCC 56
consensus_8546#3      AGCAGAAAAGT--GTGGCTCGAAAGTGCACTCCCGCCCGCGTTACAAAGCAAAGGGTTCT 194
consensus_8546#0      GGCCCGCGCCTCAAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCC---GACGCA 717
consensus_8546#1      GGCCCGCGCCTCCAGGATGGAAAACAGCCGCTCCACCCCGATCGACACGCC---GACGCA 65
                       **       *    *          **    *   **   *       *    *   * 

consensus_8546#2      --ACATTTCGGTAGTTTTGGT-TTCCCCCGTG-TGGCCACGCG--CGTGGTCGACAAGGT 110
consensus_8546#3      TGGGAGTGGGGCGGGAAGGGCATTGCACAATGCTGGCGAGACA--ATTGCTGCTCGGAGC 252
consensus_8546#0      CGGCACCTGCTTGCGTTTTGGGTTGAAC-ATGCCGACCAGATTGTCGTACCGACCGCCGC 776
consensus_8546#1      CGGCACCCTGTTGCGCTTTGGGTTGAAC-ATGCCGACCAGATTATCGTACCGGCCGCCGC 124
                          *              *  **   *  **  * * *        *      *   * 

consensus_8546#2      AGAAAGTGTGCAGCAGCGATGA-----CGGCAAAG-----GATACGCTCGAGGCTGCCAT 160
consensus_8546#3      CGGCTGCTCGTTGCGCCGGTTTTCCTCCGCCAGTC-----GGGGTGCG-GTGGTGGTCAG 306
consensus_8546#0      CCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTGCTGCCGCCTCCTGCGCCACCGC 836
consensus_8546#1      CCGCCACCGACCCGACCGTGATCTCCTCGTCCGCGCTG-TGCCGCCTCCTGCGCCACCGC 183
                                      **         ** *         *           *    *  

consensus_8546#2      CACCGCCCAGGGAGACGTGGTGCG----GAAGCTGAAGTCGGCCGCCACGAAGGATAAGG 216
consensus_8546#3      CACGATGCAGGCA-ATACGG-GCG----GGCGAGGAGGACGTCCGGCA--ACGGCTC--G 356
consensus_8546#0      CCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCC-GCGGGCCAGG 895
consensus_8546#1      CCCCGAGCAGGACCGCCTCGTATATCACGCCGGTGTAGTAGTCCAGCCC-GCGGGCCAGG 242
                      * *    ****        *        *  *  *  *  * **  *     **     *

consensus_8546#2      CGAAGATC-AACGAGGA--GGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGC 273
consensus_8546#3      CTCAGATC-AACGAGGA--GGTCCAGAAGCTGCTGGCGCTGAAGGAACAGCTCAAGCAGC 413
consensus_8546#0      CTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGC 955
consensus_8546#1      CTCAGATCGAACGACACCCGGTCCGCCACCTGGAATATCTCGCAGTACTGCAGCAGCAGC 302
                      *  ***** *****     *****   * ***      **    * ** **   ******

consensus_8546#2      TCACCGTCGACGA------CGATGGCAGCGGCGAGACAGC--AGCAGCAACACCAGCGCC 325
consensus_8546#3      TCACCGTCGACGA------CGATGGCAGCGGCGAGACAGC--AGCAGCAACACCAGCGCC 465
consensus_8546#0      CGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCTGCGCAGCGTCTCGTCCGCCGCC 1015
consensus_8546#1      CGCATGTCCTCCAGCCCCTCCATCGCCACCTTGATGCCGCGCAGCGTCTCGTCCGCCGCC 362
                           ***  * *      * ** **  *   **  * **  ***  *    **  ****

consensus_8546#2      GGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCA-ACCTGTCGCTGAAAACGCCG- 383
consensus_8546#3      GGGCAAACCAGCGGCGGCCAGTGAACCCGGCAACCGCA-ACCTGTCGCTGAAAACGCCG- 523
consensus_8546#0      AGCCGCTCGATCAGCTCGGTGCCGCCGT-GCAGCGTCACGAA--CTGCCCGATCCGCC-- 1070
consensus_8546#1      AGCCGCTCGATCAGCTCGGTGCCGTCATCGCTGCTGCACACTTTCTACCTTGTCGACCAC 422
                       * *   * * * **     *    *   **  *  **         *        **  

consensus_8546#2      AAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGTCCAACCAG 443
consensus_8546#3      AAGGGCACGCGCGACTACGGCCCGGAAGCGATGGCGCTGCGGCAGCGCGTGCTCGACCA- 582
consensus_8546#0      -CGACCGCCTCCTCCGACAGCCCCTTCTCCTCCACCATCTCGCGCCGCACCTCCTCCCAG 1129
consensus_8546#1      GCGCGTGGCCACACGGGGGAAACCAAAACTACCGAAATGTGGCACCGA---TGGGAAATG 479
                        *        *          *     *        *   **  **             

consensus_8546#2      GTGGGTGCGCGTGTTCCGCCGGCACGGCGCGGAAACGA-TCGACACGCCCGTGTTCGAGC 502
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      GGCGTCTTGTCCAGCTTGTCGACCGAGGAGAAGGCGGT-GCGGAACTTGTCCGCCGGCAC 1188
consensus_8546#1      GGAAAGAAGTGCGACCC-TGGGGCAAGGGCACAGCGACCGCGCAACACGACC--CGGCAC 536
                                                                                  

consensus_8546#2      TGAAGGAGGTGCTGACCGGGAAGTACGGCGAGGACTCGAAGCTGATCTACGACCTGAAGG 562
consensus_8546#3      ------------------------------------------------------------
consensus_8546#0      ------------------------------------------------------------
consensus_8546#1      CGGACTGTGTGTGAGTGAGAGTGTGCGTGTGCGTGTGGAAGGAAAGCGCGTTGTGTGCGG 596
                                                                                  

consensus_8546#2      ACCAGGGCGGCGAGATACTGGCGCTCCGGTACG 595
consensus_8546#3      ---------------------------------
consensus_8546#0      ---------------------------------
consensus_8546#1      ACGTACTACCGCTGCTGCCGACGCTGATGTC-- 627
                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)