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Anopheles gambiae
cluster # 8554 cluster # 8554       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8554#0 length = 1557 sequences # 10  
consensus_8554#1 length = 528 sequences # 1  

consensusID : consensus_8554#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1557
fasta sequence
                              [CCGCCCAGTGTTTGGTAGGGGACGAATGATTACGGCTCATTACCGGGGCAGCATCCAAAACGGGTACCGGCTATTGAACATTGTGTGAGGGTGTGTGTGATCAAGTTGAGGGAATTAAAAAGGGGCTTTTCATTATGCAGCTTGTGCGTGTGCGATTGTTGATCGGGTCGTTGCTACTAGCAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGCAAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG-CCGGGCGG-AGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAA-CGGGTACCCGACGGCAA-CGCTAACGAAGAATGCCCTGCCGGAGCAGGAGTTTAG-CAAGAGCTTTAGCACGTTCGGGTT-CGTGTGGACGCCGGACAACATCA-CGGT-AAGCATCAACGG-GGAGGATCTGGCCACGATCGGGGGCGACTTCTGG-ACGCGCGGTGG-TTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGCACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAGTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCACCCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGTTGCCGACGTGGAACCTGGAGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTGTAAAAGTTGCTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAGCTACGCAGTAAACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAAGGTAAACAATCCCATTAAAAAACAAATTGTTCTGAAACTTCTGCATGATGTTTCCATCTCT-CTGCGTATAGTGATTGAGTCGCAAAAACAAAAAAGCAACGCTAAATGAACATTAAAT]

[+] EMBL BM654703             [CCGCCCAGTGTTTGGTAGGGGACGAATGATTACGGCTCATTACCGGGGCAGCATCCAAAACGGGTACCGGCTATTGAACATTGTGTGAGGGTGTGTGTGATCAAGTTGAGGGAATTAAAAAGGGGCTTTTCATTATGCAGCTTGTGCGTGTGCGATTGTTGATCGGGTCGTTGCTACTAGCAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGCAAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGGCCCGGGCGG AGGTGCGCGCCAAGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGGNBP               [       GTGTTTGGTAGGGGGCGAATGATTACGGCTCATTACCGGGGCAGCATCCAAAACGGGTACCGGCTATTGAGCACTGTGTGAGGCTGTGTGTGATCAAGTTAAGGGAA GAAAAAAGAGCTTTTCATTATGCAGCTTGTGCGTGTGCAGTTGTTGATCGGGTCGTTGCTACTAGCAACCGTGGGTGACTGGGTGGAAGCCGTTTATGAATCAACAAGCACGGCTAGTACAGCGCAAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGTGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGCACAAACGATGCTTTCTACGGGTGCGTTCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG CCGGGCGG AGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAA CGGGTACCCGACGGCAA CGCTAACGAAGAATGCCCTGCCGGAGCAGGAGTTTAG CAAGAGCTTTAGCACGTTCGGGTT CGTGTGGACGCCGGACAACATCA CGGT AAGCATCAACGG GGAGGATCTGGCCACGATCGGGGGCGACTTCTGG ACGCGCGGTGG TTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGCACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAGTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCACCCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGCTGCCGACGTGGAACCTGGAGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTGTAAAAGTTACTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAGCTACGCAGTAAACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAAGGTAAACAATCCCATTAAAAAA                                                                                                 ]
[+] EMBL BM622180             [      ccgGTTTGGTAGGGGACGAATGATTACGGCTCATTACCGGGGCAGCATCCAAAACGGGTACCGGCTATTGAACATTGTGTGAGGGTGTGTGTGATCAAGTTGAGGGAATTAAAAAGGGGCTTTTCATTATGCAGCTTGTGCGTGTGCGATTGTTGATCGGGTCGTTGCTACTAGCAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGCAAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG CCGGGCGG AGGTGCGCGCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM593005             [                                               ccgGCATCCAAAACGGGTACCGGCTATTGAACATTGTGTGAGGGTGTGTGTGATCAAGTTGAGGGAATTAAAAAGGGGCTTTTCATTATGCAGCTTGTGCGTGTGCGATTGTTGATCGGGTCGTTGCTACTAGCAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGCAAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG CCGGGCGGAAGATGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AGA285520            [                                                                                                                                                                        CGTTGCTACTAGCAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGCAAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AL694043             [                                                                                                                                                                                                                                                                                          TGATCGACCGGGGACGCACGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGTGGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACAATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAA ACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGCACAAACGATGCTTTCTACGGGTGCGTTCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG CCGGGCGG AGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCG CATCTGGTTGCTGCCGAAGCGTAACGCGTACGG ACCTGG CGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGC  AACGCTACACTTTGGGCCAAATCCCTCGTACAACCGGGTACCCGACGGCAACCGCTAACGAAGAATGCCCTG CGGAGCAGGAGTTTAGCCAAGAGCTTTAGCACGTTCGGGTTCCGTGTGGACGCCGGACAACATCACCGGTCAAGCATCAACGGCGGAGGATCTGGCCACGATCGGGGCCGACTTCTGGCACGCGCGGTGGATTTCGACAAGCCCAATCTGGAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX615185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGAGCCTGCAGGGCAGTTATCCCACGGACCATTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG CCGGGCGG AGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAA CGGGTACCCGACGGCAA CGCTAACGAAGAATGCCCTGCCGGAGCAGGAGTTTAG CAAGAGCTTTAGCACGTTCGGGTT CGTGTGGACGCCGGACAACATCA CGGT AAGCATCAACGG GGAGGATCTGGCCACGATCGGGGGCGACTTCTGG ACGCGCGGTGG TTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGCACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAGTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGG                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS09NRP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTACGGTTGCGTCCGCGTCGTTTATCGGCAGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGG CCGGGCGG AGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAA CGGGTACCCGACGGCAA CGCTAACGAAGAATGCCCTGCCGGAGCAGGAGTTTAG CAAGAGCTTTAGCACGTTCGGGTT CGTGTGGACGCCGGACAACATCA CGGT AAGCATCAACGG GGAGGATCTGGCCACGATCGGGGGCGACTTCTGG ACGCGCGGTGG TTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGCACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAGTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCACCCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGTTGCCGACGTGGAACCTGGAGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTGTAAAAGTTGCTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAG TACGCAGTAAACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAAGGTAAACAATCCCATTATCCCACAAATTGTTCTGAAACTTCTGCATGATGTTTCCATCTCT CTGCGTATAGTGATTGAGTCGCAAAAACAAAAAAGCAACGCTAAATGAACATTAA  ]
[+] EMBL CNS09NRO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAA CGGGTACCCGACGGCAA CGCTAACGAAGAATGCCCTGCCGGAGCAGGAGTTTAG CAAGAGCTTTAGCACGTTCGGGTT CGTGTGGACGCCGGACAACATCA CGGT AAGCATCAACGG GGAGGATCTGGCCACGATCGGGGGCGACTTCTGG ACGCGCGGTGG TTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGCACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAGTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCACCCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGTTGCCGACGTGGAACCTGGAGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTGTAAAAGTTGCTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAGCTACGCATAAAACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAAGGTAAACAATCCCATTATCCCACAAATTGTTCTGAAACTTCTGCATGATGTTTCCATCTCTACTGCGTATAGTGATTGAGTCGCAAAAACAAAAAAGCAAAAAAAAATGAACATTAAAT]
[-] EMBL AGA284219            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAGTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCACCCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGTTGCCGACGTGGAACCTGGAGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTGTAAAAGTTGCTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAGCTACGCAGTAAACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAAGGTAAACAATCCCAAAAAAAA                                                                                                  ]


>consensus_8554#0 CCGCCCAGTGTTTGGTAGGGGACGAATGATTACGGCTCATTACCGGGGCAGCATCCAAAA CGGGTACCGGCTATTGAACATTGTGTGAGGGTGTGTGTGATCAAGTTGAGGGAATTAAAA AGGGGCTTTTCATTATGCAGCTTGTGCGTGTGCGATTGTTGATCGGGTCGTTGCTACTAG CAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGC AAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCA CGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGT GGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACA ATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGG ACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCA CGGACCACTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACA TCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACG GCCGGGCGGAGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGT TGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGG AATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCG GCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAACGGGTACCCGACGGCAACGCTAA CGAAGAATGCCCTGCCGGAGCAGGAGTTTAGCAAGAGCTTTAGCACGTTCGGGTTCGTGT GGACGCCGGACAACATCACGGTAAGCATCAACGGGGAGGATCTGGCCACGATCGGGGGCG ACTTCTGGACGCGCGGTGGTTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGCA CGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGAG TTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCAC CCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGTTGCCGACGTGGAACCTGG AGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTGT AAAAGTTGCTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAGCTACGCAGTA AACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAAG GTAAACAATCCCATTAAAAAACAAATTGTTCTGAAACTTCTGCATGATGTTTCCATCTCT CTGCGTATAGTGATTGAGTCGCAAAAACAAAAAAGCAACGCTAAATGAACATTAAAT



consensusID : consensus_8554#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 528
fasta sequence
                              [GAATCGCCCGAGGTTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCCGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGGCCGGGCGGAGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGGACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCAAACGCTACACTTTGGGCCAAATCCCTCGTACAACGGGTACCCGACGGCAACGCTAACGAAGAATGNNCCTGCCGGAGCAGGAGTTTAGCAAGAGCTTTAGCACGTTC]

[+] EMBL AL931273             [GAATCGCCCGAGGTTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCACGGACCACTGACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCCGCACATCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGGCCGGGCGGAGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTGCTGCCGAAGCGTAACGCGTACGGGACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGCAAACGCTACACTTTGGGCCAAATCCCTCGTACAACGGGTACCCGACGGCAACGCTAACGAAGAATGNNCCTGCCGGAGCAGGAGTTTAGCAAGAGCTTTAGCACGTTC]


>consensus_8554#1 GAATCGCCCGAGGTTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGGA CCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCAC GGACCACTGACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCCGCACATC GTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACGGC CGGGCGGAGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGTTG CTGCCGAAGCGTAACGCGTACGGGACCTGGCCGGCTTCGGGCGAGATGGATCTGATGGAA TCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCGGC AAACGCTACACTTTGGGCCAAATCCCTCGTACAACGGGTACCCGACGGCAACGCTAACGA AGAATGNNCCTGCCGGAGCAGGAGTTTAGCAAGAGCTTTAGCACGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8554#0      CCGCCCAGTGTTTGGTAGGGGACGAATGATTACGGCTCATTACCGGGGCAGCATCCAAAA 60
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      CGGGTACCGGCTATTGAACATTGTGTGAGGGTGTGTGTGATCAAGTTGAGGGAATTAAAA 120
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      AGGGGCTTTTCATTATGCAGCTTGTGCGTGTGCGATTGTTGATCGGGTCGTTGCTACTAG 180
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      CAACCGTGGGTGACTGGGTGGAAGCCGTCGATGAATCAACAAGCACGGCTAGTACAGCGC 240
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      AAAGTGAGTGTGTACGGTCCGTTACGACGGCCAGCGGAAGTTTGATCGACCGGGGACGCA 300
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      CGTTCTGCAGTGGCGAGCTTATTTTTGAAGATAATTTCGATTTCTTCGACTTTGAAAAGT 360
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      GGGAACACGAGAATACGCTAGCGGGCGGTGGTAACTGGGAGTTCCAGTGGTACACCAACA 420
consensus_8554#1      ----------------------------------------------------------GA 2
                                                                                 *

consensus_8554#0      ATCGGTCGAACTCATTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGG 480
consensus_8554#1      ATCGCCCGAG---GTTCGTCGAGGATGGTGCACTCAACATACGCCCAACACTGACGGCGG 59
                      ****  ***     **********************************************

consensus_8554#0      ACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCA 540
consensus_8554#1      ACCAGTTTGGGCTAGATTTCATGACATCCGGCACGCTGAGCCTGCAGGGCAGTTATCCCA 119
                      ************************************************************

consensus_8554#0      CGGACCACTGCACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCAGCACA 600
consensus_8554#1      CGGACCACTG-ACAAACGATGCTTTTTACGGTTGCGTCCGCGTCGGCAATCGGCCGCACA 178
                      ********** ******************************************* *****

consensus_8554#0      TCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACG 660
consensus_8554#1      TCGTTAATCCGGTGAAGAGTGCCCGCATCCGTACGATCAGCTCGTTCAATTTCAAGTACG 238
                      ************************************************************

consensus_8554#0      GCCGGGCGGAGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGT 720
consensus_8554#1      GCCGGGCGGAGGTGCGCGCCAAGCTGCCGACGGGCGATTGGCTGTGGCCCGCCATCTGGT 298
                      ************************************************************

consensus_8554#0      TGCTGCCGAAGCGTAACGCGTACGGCACCTGGCCGGCTTCGGGCGAGATGGATCTGATGG 780
consensus_8554#1      TGCTGCCGAAGCGTAACGCGTACGGGACCTGGCCGGCTTCGGGCGAGATGGATCTGATGG 358
                      ************************* **********************************

consensus_8554#0      AATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCG 840
consensus_8554#1      AATCGCGCGGCAACGAGAATCTGTACCTGGACGGCGTGCAGATCGGCACGCGCCAAGTCG 418
                      ************************************************************

consensus_8554#0      GCCAAACGCTACACTTTGGGCCAAATCCCTCGTACAACGGGTACCCGACGGCAACGCTAA 900
consensus_8554#1      GC-AAACGCTACACTTTGGGCCAAATCCCTCGTACAACGGGTACCCGACGGCAACGCTAA 477
                      ** *********************************************************

consensus_8554#0      CGAAGAATGCCC-TGCCGGAGCAGGAGTTTAGCAAGAGCTTTAGCACGTTCGGGTTCGTG 959
consensus_8554#1      CGAAGAATGNNCCTGCCGGAGCAGGAGTTTAGCAAGAGCTTTAGCACGTTC--------- 528
                      *********  * **************************************         

consensus_8554#0      TGGACGCCGGACAACATCACGGTAAGCATCAACGGGGAGGATCTGGCCACGATCGGGGGC 1019
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      GACTTCTGGACGCGCGGTGGTTTCGACAAGCACAATCTGGAGAACCCGTGGCGTCACGGC 1079
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      ACGCGCATGGCACCGTTCGATCAGGAGTTCCATTTCATCATTAATCTTGCGGTCGGCGGA 1139
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      GTTGCCTTTTTCCCCGACGCGGCCACAAACCCGGGCGGTAAGCCGTGGAAAAACAACTCA 1199
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      CCCCAAGCGGCGACAGACTTTTGGAACGGACGCGCCCAGTGGTTGCCGACGTGGAACCTG 1259
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      GAGCGGGATGGGGGCAAGTCTGCCTCGTTGCTGGTGGATTATGTGAAAGTTTGGGCGCTG 1319
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      TAAAAGTTGCTGTGGCATTTTTCCCCCGCTTTTAACTCGTGTGGTGGCCAGCTACGCAGT 1379
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      AAACAAACCACTGAAAGCGCATTAATCTGAAGTTTGATTTTTTTTAATAAATAAAAAAAA 1439
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      GGTAAACAATCCCATTAAAAAACAAATTGTTCTGAAACTTCTGCATGATGTTTCCATCTC 1499
consensus_8554#1      ------------------------------------------------------------
                                                                                  

consensus_8554#0      TCTGCGTATAGTGATTGAGTCGCAAAAACAAAAAAGCAACGCTAAATGAACATTAAAT 1557
consensus_8554#1      ----------------------------------------------------------
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)