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Anopheles gambiae
cluster # 8574 cluster # 8574       Sequences # 11       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8574#0 length = 2247 sequences # 8  
 consensus_8574#1 length = 659 sequences # 2  
consensus_8574#2 length = 428 sequences # 1  
consensusID : consensus_8574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2247
fasta sequence 
                              [CCGGCGGGCGCAGGTAAAGGTAATGATAGTCAAGCAAGAGCCAAGAGAGCATACGTTTTGTTGTTGCTGAAGCAAAGCAAAGCAGTGAATCCGTACAACGTGAACATTTTCGTCCTATAACGTAGTAAGCGTGTGAACGAAGAGAAAAGCAATCGAGTAGCTTAAGAAAACAGT----GTAATACAGAGTGAAGTTAGAAAGCAACGCGATTTGTTTGGTGAAAAAGACAAATTCCAGTGCCAAAGAACTAACGGTACATCATACCTGTTTCTCAAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGAAGATGAAGATCTCGAAGATGGTGATGGGTCAGGATGGGTCGGCGCGGAAGGAGGAGAAGATCCTGAGCATCAACGTGAAG-CCGGGCTGGAAGGCGGGCACGAAGATAACGTTCCCGCGCGAGGGCGACCAAATTCCGGGCAAGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAACCGCACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGCGGCAGGCGCTGTGCGGTACGGTGGTGAAGGTGCCGACGCTGAGCGGCGAAACGCTTACCATCTCGACGGCGGGCGAAGTGGTGAAGCCACACACGGTCAAGCGACTGCAGAACCGGGGGCTGCCCTTCCCGAAGGAACCGAGCCGGAGGGGCGACCTGGTGGTGGCGTTCGATATCCGCTTCCCCGATCAGGTGTCCCCCAGTACGAAGGAAATCCTGGCCGACCTGTTCCCGATGGATGTGGCCTAAGGTGGGTGTGGACCGACGACATAAACACCAAAACCTTCCCGCACCACCAACAAACCGACCACAACGACGACAATGACCGCGAGCAGCAGCTCCCTTGTTCCGCAAGCATCATCATCCTCTCGCTCTCAAGTGCGCACGTTTGCGCTCTAATGCATCTGGCGTTGAGTGCATTCTCGAACGTTCCAAGCGGGAAGGGGATGCGCTTTTGCGGAGGGAAAAGAACAGTGTGCCCCCCGAGAGTGAAAGCAACGGGAAGCAACGAAAAAAACACAGGTGTAAATAGAGCAGGATGATGCACACTGTGCGCCACAGCGGCGTAGAAGGAGCAACACACGGAGAGAAGGGTCTAGCACAACAGCGCGCCCAAGAGACCTTCGAACGATGATAGTACGCAACGCGCGCGCACACGATGGTCTACGTGACAAACCGCGTGAAGCGAGTGGAAAACAGCGGACGGAACGGGTGTGTTGGTCCGTCTGCCAGCTGGAAAGCACTCCCCCCTCCCCCATCCCACTGGGGAGATTTTGGGGACGAAGGAAGCATCTCGATCGATTATCCCATCCTCCCACCCTACGTCGCCTTACCATCGGACAGTGAGTGTGTGTGGAGATGTGCACAAAATAGTGGTGCGCCGTACTAACAGCCTGTGACTGTGTGTGTGAATGTTGTGTTTTGGCGCCCTCTATTGGCAAACGGCGGTGGACCATTTTAACCGTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGGCCCATTATTATGCCGTGTGCCGTGTTTGAATAGTGCGCATATCTAT]

[+] EMBL BM646837             [CCGGCGGGCGCAGGTAAAGGTAATGATAGTCAAGCAAGAGCCAAGAGAGCATACGTTTTGTTGTTGCTGAAGCAAAGCAAAGCAGTGAATCCGTACAACGTGAACATTTTCGTCCTATAACGTAGTAAGCGTGTGAACGAAGAGAAAAGCAATCGAGTAGCTTAAGAAAACAGT    GTAATACAGAGTGAAGTTAGAAAGCAACGCGATTTGTTTGGTGAAAAAGACAAATTCCAGTGCCAAAGAACTAACGGTACATCATACCTGTTTCTCAAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCTCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM648143             [                                               ccgATACGTTTTGTTGTTGCTGAAGCAAAGCAAAGCAGTGAATCCGTACAACGTGAACATTTTCGTCCTGTAACGTAGTAAGCGTGTGAACGAAGAAAAAAGCAATCGAGTAGCTTAAGAAAACAGTGCGAGTAATACAGAGTGAAGTTGAAAAGCAACGCGATTTGTTTGGTGAAAAAGACAAATTCCAGTGCCACAGAACTAACGGTACATCATACCTGTTTCTCAAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM615434             [                                                                                                                                                                                                                                                                                                                                                                                           ccgGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGAAGATGAAGATCTCGAAGATGGTGATGGGTCAGGATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM611756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       cCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTCTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTCGGCGGGTTCCCGGGCGGTGCCTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGAAGATGAAGATCTCGAAGATGGTGATGGGCCAGGATGGGTCGGCGCGGAAGGAGGAGAAGATCCTGAGCATCAACGTGAAGCCCGGGCTGGAAGGCGGGCACGAAGATAACGTTCCCGCGCGAGGGCGACCAAATTCCGGGCAAGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAACCGCACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGCGGCAGGCGCTGTGCGGTACGGTGGTGAAGGTGCCGACGCTGAGCGGCGAAACGCTTACCATCTCGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM633226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTCGGGGGGTTCCCGGGCGGTGCCTACCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGAAGATGAAGATCTCGAAGATGGTGATGGGCCAGGATGGGTCGGCGCGGAAGGAGGAGAAGATCCTGAGCATCAACGTGAAG CCGGGCTGGAAGGCGGGCACGAAGATAACGTTCCCGCGCGAGGGCGACCAAATTCCGGGCAAGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAACCGCACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGCGGCAGGCGCTGTGCGGTACGGTGGTGAAGGTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM618336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGAAGATGAAGATCTCGAAGATGGTGATGGGTCAGGATGGGTCGGCGCGGAAGGAGGAGAAGATCCTGAGCATCAACGTGAAG CCGGGCTGGAAGGCGGGCACGAAGATAACGTTCCCGCGCGAGGGCGACCAAATTCCGGGCAAGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAACCGCACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGCGGCAGGCGCTGTGCGGTACGGTGGTGAAGGTGCCGACGCTGAGCGGCGAAACGCTTACCATCTCGACGGCGGGCGAAGTGGTGAAGCCACACACGGTCAAGCGACTGCAGAACCGGGGGCTGCCCTTCCCGAAGGAACCGAGCCGGAGGGGCGACCTGGTGGTGGCGTTCGATATCCGCTTCCCCGATCAGGTGTCCCCCAGTACGAAGGAAATCCTGGCCGACCTGTTCCCGATGGATGTGGCCTAAGGTGGGTGTGGACCGACGACATAAACACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM624524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAACCGCACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGCGGCAGGCGCTGTGCGGTACGGTGGTGAAGGTGCCGACGCTGAGCGGCGAAACGCTTACCATCTCGACGGCGGGCGAAGTGGTGAAGCCACACACGGTCAAGCGACTGCAGAACCGGGGGCTGCCCTTCCCGAAGGAACCGAGCCGGAGGGGCGACCTGGTGGTGGCGTTCGATATCCGCTTCCCCGATCAGGTGTCCCCCAGTACGAAGGAAATCCTGGCCGACCTGTTCCCGATGGATGTGGCCTAAGGTGGGTGTGGACCGACGACATAAACACCAAAACCTTCCCGCACCACCAACAAACCGACCACAACGACGACAATGACCGCGAGCAGCAGCTCCCTTGTTCCGCAAGCATCATCATCCTCTCGCTCTCAAGTGCGCACGTTTGCGCTCTAATGCATCTGGCGTTGAGTGCATTCTCGAACGTTCCAAGCGGGAAGGGGATGCGCTTTTGCGGAGGGAAAAGAACAGTGTGCCCCCCGAGAGTGAAAGCAACGGGAAGCAACGAAAAAAACACAGGTGTAAATAGAGCAGGATGATGCACACTGTGCGCCACAGCGGCGTAGAAGGAGCAACACACGGAGAGAAGGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM584661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgGCATTCTCGAACGTTCCAAGCGGGAAGGGGGTGCGCTTTTGCAGAGGGAAAAGAAGAGTGTG CCCCCGAGAGTGAAAGCAACGGGAAGCAACG AAAAAACACAGGTGTACATAGAGCAGGATGATGCACACTGTGCTCCACAGCGGCGTAGAAGGAGCAACACACGGAGAGAAGGTTCTAGCACAACAGCGCGCCCAAGAGACCTTCGAACGATGATAGTACGCAACGCGCGCGCACACGATGGTCTACGTGACAAACCGCGTGAAGCGAGTGGAAAACAGCGGACGGAACGGGTGTGTTGGTCCGTCTGCCAGCTGGAAAGCACTCCCCCCTCCCCCATCCCACTGGGGAGATTTTGGGGACGAAGGAAGCATCTCGATCGATTATCCCATCCTCCCACCCTACGTCGCCTTACCATCGGACAGTGAGTGTGTGTGGAGATGTGCACAAAATAGTGGTGCGCCGTACTAACAGCCTGTGACTGTGTGTGTGAATGTTGTGTTTTGGCGCCCTCTATTGGCAAACGGCGGTGGACCATTTTAACCGTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGGCCCATTATTATGCCGTGTGCCGTGTTTGAATAGTGCGCATATCTAT]




>consensus_8574#0
CCGGCGGGCGCAGGTAAAGGTAATGATAGTCAAGCAAGAGCCAAGAGAGCATACGTTTTG
TTGTTGCTGAAGCAAAGCAAAGCAGTGAATCCGTACAACGTGAACATTTTCGTCCTATAA
CGTAGTAAGCGTGTGAACGAAGAGAAAAGCAATCGAGTAGCTTAAGAAAACAGTGTAATA
CAGAGTGAAGTTAGAAAGCAACGCGATTTGTTTGGTGAAAAAGACAAATTCCAGTGCCAA
AGAACTAACGGTACATCATACCTGTTTCTCAAGGAGGAACGTTCTGGAATACCTACATAC
CACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGT
AAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGC
GTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAG
TATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAA
GCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAG
GGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAG
TACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCG
TTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGC
GATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTC
CGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCG
CCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGAAG
ATGAAGATCTCGAAGATGGTGATGGGTCAGGATGGGTCGGCGCGGAAGGAGGAGAAGATC
CTGAGCATCAACGTGAAGCCGGGCTGGAAGGCGGGCACGAAGATAACGTTCCCGCGCGAG
GGCGACCAAATTCCGGGCAAGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAACCG
CACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGCGG
CAGGCGCTGTGCGGTACGGTGGTGAAGGTGCCGACGCTGAGCGGCGAAACGCTTACCATC
TCGACGGCGGGCGAAGTGGTGAAGCCACACACGGTCAAGCGACTGCAGAACCGGGGGCTG
CCCTTCCCGAAGGAACCGAGCCGGAGGGGCGACCTGGTGGTGGCGTTCGATATCCGCTTC
CCCGATCAGGTGTCCCCCAGTACGAAGGAAATCCTGGCCGACCTGTTCCCGATGGATGTG
GCCTAAGGTGGGTGTGGACCGACGACATAAACACCAAAACCTTCCCGCACCACCAACAAA
CCGACCACAACGACGACAATGACCGCGAGCAGCAGCTCCCTTGTTCCGCAAGCATCATCA
TCCTCTCGCTCTCAAGTGCGCACGTTTGCGCTCTAATGCATCTGGCGTTGAGTGCATTCT
CGAACGTTCCAAGCGGGAAGGGGATGCGCTTTTGCGGAGGGAAAAGAACAGTGTGCCCCC
CGAGAGTGAAAGCAACGGGAAGCAACGAAAAAAACACAGGTGTAAATAGAGCAGGATGAT
GCACACTGTGCGCCACAGCGGCGTAGAAGGAGCAACACACGGAGAGAAGGGTCTAGCACA
ACAGCGCGCCCAAGAGACCTTCGAACGATGATAGTACGCAACGCGCGCGCACACGATGGT
CTACGTGACAAACCGCGTGAAGCGAGTGGAAAACAGCGGACGGAACGGGTGTGTTGGTCC
GTCTGCCAGCTGGAAAGCACTCCCCCCTCCCCCATCCCACTGGGGAGATTTTGGGGACGA
AGGAAGCATCTCGATCGATTATCCCATCCTCCCACCCTACGTCGCCTTACCATCGGACAG
TGAGTGTGTGTGGAGATGTGCACAAAATAGTGGTGCGCCGTACTAACAGCCTGTGACTGT
GTGTGTGAATGTTGTGTTTTGGCGCCCTCTATTGGCAAACGGCGGTGGACCATTTTAACC
GTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGGCCCATTATTATGCCGTGTG
CCGTGTTTGAATAGTGCGCATATCTAT

consensusID : consensus_8574#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 659
fasta sequence 
                              [GACCCACGCGTCCGCAAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGA]

[+] EMBL BM650639             [GACCCACGCGTCCGCAAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGA]
[+] EMBL BM631553             [GACCCACGCGTCCG AAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCTCTAAAGTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTCTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTCGATGGGCGGGGCGGCAGTGTCGGCGGGTTCCCGGGCGGTGCCTTCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAACTGCAGGATCCGCCGATCGAGC    ]




>consensus_8574#1
GACCCACGCGTCCGCAAGGAGGAACGTTCTGGAATACCTACATACCACTGTGTGTGACTG
TGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGTAAAACAAAGCAAACA
GAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAATTCTCGGCGTGTCGAAGAATGCC
AGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAAGTATCACCCGGACAAG
AACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGAAGCGTACGAGGTGCTG
TCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGAGGGGCTGAAGGGTGGC
GCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCAGTACAACTTCCACGGC
GATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCCGTTCAGCGTGTTTTTC
GGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGGCGATCCGTTCGGGTTC
GATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGTTCCGGTCGCAGTCGTTC
AACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATCCGCCGATCGAGCACGA

consensusID : consensus_8574#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 428
fasta sequence 
                              [AGAATCGCCGAGGTTATTTGGGGACGAAGGAATCATCTCGATCGATTATCCCATCATCCCACCTTCCGTCGCTTACCATCGGACAGTGAGTGTGTGTGGAGATGTGCACAAAATAGTGGTGCGCCGTACTAATAGCCTGTGACTGTGTGTGTGAATGTTGTGTTTGGCGCCCTCTATTGGCAAACGGCGGTGGACCATTTTAACCGTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGCCCATTATAATGCCGTGTGCCGTGTTTGAATAGTGCGCACATCTATTCCCGTCGTGTCCGGTTGGTGCTCTGCTCCTCGTGATTGATACCGTAAGGGGGTGGGGCGCGCGTACATTGTTTCGATTTCCAAAGAGAGGGGAGNGGAAAAACAAACAACGACCTGTGGAGGGAACACAATTCACA]

[+] EMBL AL932018             [AGAATCGCCGAGGTTATTTGGGGACGAAGGAATCATCTCGATCGATTATCCCATCATCCCACCTTCCGTCGCTTACCATCGGACAGTGAGTGTGTGTGGAGATGTGCACAAAATAGTGGTGCGCCGTACTAATAGCCTGTGACTGTGTGTGTGAATGTTGTGTTTGGCGCCCTCTATTGGCAAACGGCGGTGGACCATTTTAACCGTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGCCCATTATAATGCCGTGTGCCGTGTTTGAATAGTGCGCACATCTATTCCCGTCGTGTCCGGTTGGTGCTCTGCTCCTCGTGATTGATACCGTAAGGGGGTGGGGCGCGCGTACATTGTTTCGATTTCCAAAGAGAGGGGAGNGGAAAAACAAACAACGACCTGTGGAGGGAACACAATTCACA]




>consensus_8574#2
AGAATCGCCGAGGTTATTTGGGGACGAAGGAATCATCTCGATCGATTATCCCATCATCCC
ACCTTCCGTCGCTTACCATCGGACAGTGAGTGTGTGTGGAGATGTGCACAAAATAGTGGT
GCGCCGTACTAATAGCCTGTGACTGTGTGTGTGAATGTTGTGTTTGGCGCCCTCTATTGG
CAAACGGCGGTGGACCATTTTAACCGTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTG
CGTCGCCCATTATAATGCCGTGTGCCGTGTTTGAATAGTGCGCACATCTATTCCCGTCGT
GTCCGGTTGGTGCTCTGCTCCTCGTGATTGATACCGTAAGGGGGTGGGGCGCGCGTACAT
TGTTTCGATTTCCAAAGAGAGGGGAGNGGAAAAACAAACAACGACCTGTGGAGGGAACAC
AATTCACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8574#0      CCGGCGGGCGCAGGTAAAGGTAATGATAGTCAAGCAAGAGCCAAGAGAGCATACGTTTTG 60
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TTGTTGCTGAAGCAAAGCAAAGCAGTGAATCCGTACAACGTGAACATTTTCGTCCTATAA 120
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CGTAGTAAGCGTGTGAACGAAGAGAAAAGCAATCGAGTAGCTTAAGAAAACAGTGTAATA 180
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CAGAGTGAAGTTAGAAAGCAACGCGATTTGTTTGGTGAAAAAGACAAATTCCAGTGCCAA 240
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      AGAACTAACGGTACATCATACCTGTTTCTCAAGGAGGAACGTTCTGGAATACCTACATAC 300
consensus_8574#1      --------------GACCCACGCGTC-CGCAAGGAGGAACGTTCTGGAATACCTACATAC 45
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGT 360
consensus_8574#1      CACTGTGTGTGACTGTGCCGAGTGTGTTTCTAGTGCGCAAGAACACCGTTAAGTAACAGT 105
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      AAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAAT-TCTCGG 419
consensus_8574#1      AAAACAAAGCAAACAGAAGCGAAACCAAAAATGGGGAAAGATTTCTACAAAAT-TCTCGG 164
consensus_8574#2      ------AGAATCGCCGAGGTTATTTGGGGACGAAGGAATCATCTCGATCGATTATCCCAT 54
                            *      * ** *  *       *    ****  ** ** *   * * ** *  

consensus_8574#0      CGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAA 479
consensus_8574#1      CGTGTCGAAGAATGCCAGCGACGATGAGATCAAGAAGGCGTACCGCAAGCTGGCCCTAAA 224
consensus_8574#2      CATCCCACCTTCCGTCGCTTACCATCGGACAGTGAGTGTGTGTGG--AGATGTGCACAAA 112
                      * *  *       * *    ** **  **    **  * **   *  ** **  *  ***

consensus_8574#0      GTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGA 539
consensus_8574#1      GTATCACCCGGACAAGAACAAAGCGCCGCAGGCGGAGGAACGGTTCAAGGAGGTGGCGGA 284
consensus_8574#2      ATA--------------GTGGTGCGCCGTA--CTAATAGCCTGTGACTGTGTGTGTGAAT 156
                       **                   ****** *  *  *    * **    *   ***     

consensus_8574#0      AGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGA 599
consensus_8574#1      AGCGTACGAGGTGCTGTCGGACAAGAAGAAGCGCGACATCTACGACCAGTACGGCGAGGA 344
consensus_8574#2      GTTGTGTTTGGCGCCCTCTATTGGCAAACGGCG----GTGGACCATTTTAACCGTGGCGA 212
                         **    ** **  **       **   ***     *  ** *     ** * *  **

consensus_8574#0      GGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCA 659
consensus_8574#1      GGGGCTGAAGGGTGGCGCGGGCGGCATGCCGGGTGCGGGCGGCCAGAGCGGCCAGTTCCA 404
consensus_8574#2      AGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGCCCATTATAATGCCGTGTGCCGTGTTT 272
                       *     *   **   **  *  *  ***   *  *           * *  * **    

consensus_8574#0      GTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCC 719
consensus_8574#1      GTACAACTTCCACGGCGATCCGCGCGCCACGTTCGCCCAGTTCTTCGGCACCAGCGACCC 464
consensus_8574#2      GAATAGTGCGCACATCTATTCCCG--TCGTGTCCGGTTGGTGCTCTGCTCCTCGTGATTG 330
                      * * *     ***  * ** * **   *  ** **    ** **  *   *  * **   

consensus_8574#0      GTTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGG 779
consensus_8574#1      GTTCAGCGTGTTTTTCGGCACGGACGGGGGCGGCAACATCTTCCACCAGGAGATGGACGG 524
consensus_8574#2      ATACCGTAAGGGGGT-GGGGCGCGCGTACATTGTTTCGATTTCCAAAGAGAGGGGAGNGG 389
                       * * *   *    * **  **  **      *   *   *****    ***  *   **

consensus_8574#0      CGATCCGTTCGG-GTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGT 838
consensus_8574#1      CGATCCGTTCGG-GTTCGATGGGCGGGGCGGCAGTGTTGGCGGGTTCCCGGGCGGTGCGT 583
consensus_8574#2      AAAAACAAACAACGACCTGTGGAGGGAACACAATTCACA--------------------- 428
                        *  *   *   *  *  ***  **  *   * *                         

consensus_8574#0      TCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATC 898
consensus_8574#1      TCCGGTCGCAGTCGTTCAACGTGCACGGGTCGCCGCAGCGCAAGCAGAAGCTGCAGGATC 643
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CGCCGATCGAGCACGATCTGTACGTGTCGCTCGAGGACGTCAACGCGGGCTGCCAGAAGA 958
consensus_8574#1      CGCCGATCGAGCACGA-------------------------------------------- 659
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      AGATGAAGATCTCGAAGATGGTGATGGGTCAGGATGGGTCGGCGCGGAAGGAGGAGAAGA 1018
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TCCTGAGCATCAACGTGAAGCCGGGCTGGAAGGCGGGCACGAAGATAACGTTCCCGCGCG 1078
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      AGGGCGACCAAATTCCGGGCAAGGTGCCGGCCGACATCGTGTTCATCATCCGGGACAAAC 1138
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CGCACGCGCATTTCAAGCGCGAGGGCAGCGACATCAAGTACACGGCCAAGATCTCCCTGC 1198
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      GGCAGGCGCTGTGCGGTACGGTGGTGAAGGTGCCGACGCTGAGCGGCGAAACGCTTACCA 1258
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TCTCGACGGCGGGCGAAGTGGTGAAGCCACACACGGTCAAGCGACTGCAGAACCGGGGGC 1318
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TGCCCTTCCCGAAGGAACCGAGCCGGAGGGGCGACCTGGTGGTGGCGTTCGATATCCGCT 1378
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TCCCCGATCAGGTGTCCCCCAGTACGAAGGAAATCCTGGCCGACCTGTTCCCGATGGATG 1438
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TGGCCTAAGGTGGGTGTGGACCGACGACATAAACACCAAAACCTTCCCGCACCACCAACA 1498
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      AACCGACCACAACGACGACAATGACCGCGAGCAGCAGCTCCCTTGTTCCGCAAGCATCAT 1558
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CATCCTCTCGCTCTCAAGTGCGCACGTTTGCGCTCTAATGCATCTGGCGTTGAGTGCATT 1618
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CTCGAACGTTCCAAGCGGGAAGGGGATGCGCTTTTGCGGAGGGAAAAGAACAGTGTGCCC 1678
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CCCGAGAGTGAAAGCAACGGGAAGCAACGAAAAAAACACAGGTGTAAATAGAGCAGGATG 1738
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      ATGCACACTGTGCGCCACAGCGGCGTAGAAGGAGCAACACACGGAGAGAAGGGTCTAGCA 1798
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CAACAGCGCGCCCAAGAGACCTTCGAACGATGATAGTACGCAACGCGCGCGCACACGATG 1858
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      GTCTACGTGACAAACCGCGTGAAGCGAGTGGAAAACAGCGGACGGAACGGGTGTGTTGGT 1918
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CCGTCTGCCAGCTGGAAAGCACTCCCCCCTCCCCCATCCCACTGGGGAGATTTTGGGGAC 1978
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      GAAGGAAGCATCTCGATCGATTATCCCATCCTCCCACCCTACGTCGCCTTACCATCGGAC 2038
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      AGTGAGTGTGTGTGGAGATGTGCACAAAATAGTGGTGCGCCGTACTAACAGCCTGTGACT 2098
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      GTGTGTGTGAATGTTGTGTTTTGGCGCCCTCTATTGGCAAACGGCGGTGGACCATTTTAA 2158
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      CCGTGGCGAAGATTCTAGAAGTAAAGCAAGGTGTGTGCGTCGGCCCATTATTATGCCGTG 2218
consensus_8574#1      ------------------------------------------------------------
consensus_8574#2      ------------------------------------------------------------
                                                                                  

consensus_8574#0      TGCCGTGTTTGAATAGTGCGCATATCTAT 2247
consensus_8574#1      -----------------------------
consensus_8574#2      -----------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)