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Anopheles gambiae
cluster # 8582 cluster # 8582       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8582#0 length = 2169 sequences # 8  
consensus_8582#1 length = 547 sequences # 1  
consensus_8582#2 length = 466 sequences # 1  
consensus_8582#3 length = 379 sequences # 1  

consensusID : consensus_8582#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2169
fasta sequence
                              [CTTCTTCTTCTTCTTTTAGGGAGGGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCTTATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTATACAACTGATTCCGCTTGTGTGGTTCTATTCCTTTTTGCTGGGAACAAAACCACGTTCTGTCGATCACTGTGTGTGTATCGTCCTGTGTAATATAGTGAATCCTGTCTATTATCGATTTTAATTCCTTCCCCTAGGAGAGAGAAAAAGGGGAGCGTTGGTGCTTGGTTTTCGTAGCAACAAATCCAATTATAATTCCTATAAGACCTGATGGTGGTTGTTCGTATGACCTTTTCTGATCTACTCTGCTTGCTTCCCTACCGTGTTCCCGCTCAATCTATACACCGTATTAAATAATTCAATTCATCTGTGGAAAAGTTTGTACTCCCGTTATAGTAGTAGTAGTTGTAGTTTAAAGGGGATTTCAGGGAGGGCACACACATACATACAAACGCACATACACTATTTGCTGCGATACAGAAATGAGCCAAATGTAAAAAAGGAAACAAAAATTATATAAAAGCAAAGAATTTTTTTTTTGGT-A-AATCAATACATTTGGTTGCACACCCAAGCGACTTGGAACAGTTG-ACAGCATATATGATGCGTTTTTTCCGTAGGGAGTGTGGG-TGGTATTGATTTACAGTGT-CCCCATCAGCAAATAGATAAGATTTTCTTTGCAGCGTGTGTGC-GTGTGTGTG-CGAATGTCCTTTAAGCAGGGCGAGATACAGCAGTAGGCTTGGTTAGCTGAA-AAAGCCCTCGGAAACCGTGCACATACACACACACAGGGGAGGGTAGGGATGGGGCTTACACCGGGGGCAGCTGATCGATCGGGGTGTGGAAGTTAAAGTCCTCGGGGAACAGTTCGGCCGCGTGCGGGTACATTAACCGGTACGACTGGCGGATCGT-GACGTCGGCCACGCCGGCAATGTCGCCGATTTCCTTGTGTGTTTTCTTGTTATCGGACGCTTGCGAGGCCATGTAGATGGCGGCTGCCGCCACGGAGATGGGCGATCGGCCGGGAACGATGTCCATTTCGACCGCTTTCCGAGCTATATGCGTAGCGGCACGCTGTACCACATTTGGTAGGTCCAGGTTGGCGCAGAAGCGGGACATGAAGTCGGCGGTGGTGATGAGATCGACGGAGGTGGCGAGCGCCTTGAGCGTGAGCTTGAAGCAGCGTCCGATCTCCTTTTTGCTGATCTTGCTGACGGC-GCAGATCTCTTTGAACGTTCGCGGCACGCCCTCCTGCCGGCAGGCGATGTACAGACAGGCGGACGC-TTTGGCATCGTTCGAGCGGCCCTTCAGGTTTTTGCCGTCGTGCACCTGCTTGAACAGATTGTTCGCCCGGTCGGTGATCGTTTTCGGCAGGTTAATCCGGTCCGCCATCGTGCTGATTTCCTTGAACGCCGCAATCAGCGCCCGGTCGGAGCTGCTCATCGTGCGGCGGTTCTGATACTTGGCAGTTCCGAATGCGTCGAACGACGCGGGACCAGTGCCGGGACCGATCATGGTGGACAGATCGCCTCCACTGAGCAGCGGGTTTTCCGGCCCACCGACACGGGACGGGTCCACGCCTGCCTTTTCGTTGCTAAACGTACGCCATTCCGAGCCCACGTCGATGACCCGATCGCCCACCACCAGCCCACACTCGGAGCATATCATATCGCCGGCCCGGTAGTCCTCTATCAGTGGTGCCTCCGGGTGCGAGTAGCAGCACACTTTGTTCAAATGGGCGTCCCTTGATGAGCTTGCCATTGTGCCCGCGCCTGTCTCAGTTCCGTTCCCGGGGTAGGAAGTTGCGTTGCCCGCTAGCCCACTGTCGGTGCGAATGTTTGCACTTTGGTGTGTTCTCTGCAAACGGGGGGCCCCACCAAAGTAACAACGTAGCAAACACCACAGCCACCGAGGGCAGCACCAAACGCCAAGCGAACGGAGGGATTTACACGGCTTTG-TACGCCGCCACCGATGATGTTTCGTGTTTGTCGTACGGGTAAACACTTAATTAACACAGCGATTGGGCCGTTTGAATGTTTTGAAGCGACGAAAGGTGTGAAAATAATGTACAATTTTTGGGGTGTCCCGCGCCTTTTGCGTTGATTTGCTTCGCGGCCCACGCGTCCGCGG]

[+] EMBL CNS09KDL             [CTTCTTCTTCTTCTTTTAGGGAGGGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCTTATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTATACAACTGATTCCGCTTGTGTGGTTCTATTCCTTTTTGCTGGGAACAAAACCACGTTCTGTCGATCACTGTGTGTGTATCGTCCTGTGTAATATAGTGAATCCTGTCTATTATCGATTTTAATTCCTTCCCCTAGGAGAGAGAAAAAGGGGAGCGTTGGTGCTTGGTTTTCGTAGCAACAAATCCAATTATAATTCCTATAAGACCTGATGGTGGTTGTTCGTATGACCTTTTCTGATCTACTCTGCTTGCTTCCCTACCGTGTTCCCGCTCAATCTATACACCGTATTAAATAATTCAATTCATCTGTGGAAAAGTTTGTACTCCCGTTATAGTAGTAGTAGTTGTAGTTTAAAGGGGATTTCAGGGAGGGCACACACATACATACAAACGCACATACACTATTTGCTGCGATACAGAAATGAGCCAAATGTAAAAAAGGAAACAAAAATTATATAAAAGCAAAGAATTTTTTTTTTGGT A AATCAATACATTTGGTTGCACACCCAAGCGACTTGGAACAGTTG ACAGCATATATGATGCGTTTTTTCCGTAGGGAGTGTGGG TGGTATTGATTTACAGTGT GCCCATCAGCAAATAGATAAGATTTTCTTTGCAGCGTGCGTGC GTGTGTGTG CGAATGTCCTTTAAGCAGGGCGAGACACAGCAGTAGGCTTGGTTAGCTGAA AAAGCCCTCGGAAACCGTGCACATACACTCACACAGGGGAGGGTAGGGATGGGGCTTACACCGGGGGCAGCTGATCGATCGGGGTGTGGAAGTTAAAGTCCTCGGGGAACAGTTCGGCCGCGTGCGGGTACATTAACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AGA282210            [                                                                                                                                 GTTCTATTCCTTTTTGCTGGGAACAAAACCACGTTCTGTCGATCACTGTGTGTGTATCGTCCTGTGTAATATAGTGAATCCTGTCTATTATCGATTTTAATTCCTTCCCCTAGGAGAGAGAAAAAGGGGAGCGTTGGTGCTTGGTTTTCGTAGCAACAAATCCAATTATAATTCCTATAAGACCTGATGGTGGTTGTTCGTATGACCTTTTCTGATCTACTCTGCTTGCTTCCCTACCGTGTTCCCGCTCAATCTATACACCGTATTAAATAATAAAATTCATCTGTGGAAAAGTTTGTACTCCCGTTATAGTAGTAGTAGTTGTAGTTTAAAGGGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AL932663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTGGTGANAATCAATACATTTGGTTGCACACCCAAGCGACTTGGAACAGTTGTACAGCATATATGATGCGTTTTTTCCGTAGGGAGTGTGGGTTGGTATTGATTTACAGTGT CCCCATCAGCAAATAGATAAGATTTTCTTTGCAGCGTGTGTGCTGTGTGTGTGTCGAATGTCCTTTAAGCAGGGCGAGATACAGCAGTAGGCTTGGTTAGCTGAATAAAGCCCTCGGAAACCGTGCACATACACACACACAGGGGAGGGTAGGGATGGGGCTTACACCGGGGGCAGCTGATCGATCGGGGTGTGGAAGTTAAAGTCCTCGGGGAACAGTTCGGCCGCGTGCGGGTACA TAACC GTACGACTGGCGGATCGTANACCTCGtgcgattct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BX621952             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGTCCCCCATCAGCAAATAGATAAGATTTTC TTGCAGCGTGTGTGC GTGTGTGTG CGAATGTCCTTTAAGCAGGGCGAGATACAGCAGTAGGCTTGGTTAGCTGAA AAAGCCCTCGGAAACCGTGCACATACACACACACAGGGGAGGGTAGGGATGGGGCTTACACCGGGGGCAGCTGATCGATCGGGGTGTGGAAGTTAAAGTCCTCGGGGAACAGTTCGGCCGCGTGCGGGTACATTAACCGGTACGACTGGCGGATCGT GACGTCGGCCACGCCGGCAATGTCGCCGATTTCCTTGTGTGTTTTCTTGTTATCGGACGCTTGCGAGGCCATGTAGATGGCGGCTGCCGCCACGGAGATGGGCGATCGGCCGGGAACGATGTCCATTTCGACCGCTTTCCGAGCTATATGCGTAGCGGCACGCTGTACCACATTTGGTAGGTCCAGGTTGGCGCAGAAGCGGGACATGAAGTCGGCGGTGGTGATGAGATCGACGGAGGTGGCGAGCGCCTTGAGCGTGAGCTTGAAGCAGCGTCCGATCTCCTTTTTGCTGATCTTGCTGACGGC GCAGATCTCTTTGAACGTTCGCGGCACGCCCTCCTGTCGGCAGGCGATGTACAGACAGGCGGACGCTTTTGGCATCGTTCGAGCGGCCCTTCAGGTTTTTGCCGTCGTGCACCTGCTTGAACAGATTGTTCGCCCGGTCGGTGATCGTTTTCGGCAGGTTAATCCGGTCCGCCATCGTGCTGATTTCCTTGAACGCCGCGATCAGCGCCCGGTCGGAGCTGCTCATCGTGCGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM647962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGACTGGCGGATCGT GACGTCGGCCACGCCGGCAATGTCGCCGATTTCCTTGTGTGTTTTCTTGTTATCGGACGCTTGCGAGGCCATGTAGATGGCGGCTGCCGCCACGGAGATGGGCGATCGGCCGGGAACGATGTCCATTTCGACCGCTTTCCGAGCTATATGCGTAGCGGCACGCTGTACCACATTTGGTAGGTCCAGGTTGGCGCAGAAGCGGGACATGAAGTCGGCGGTGGTGATGAGATCGACGGAGGTGGCGAGCGCCTTGAGCGTGAGCTTGAAGCAGCGTCCGATCTCCTTTTTGCTGATCTTGCTGACGGC GCAGATCTCTTTGAACGTTCGCGGCACGCCCTCCTGCCGGCAGGCGATGTACAGACAGGCGGACGC TTTGGCATCGTTCGAGCGGCCCTTCAGGTTTTTGCCGTCGTGCACCTGCTTGAACAGATTGTTCGCCCGGTCGGTGATCGTTTTCGGCAGGTTAATGCGGTCCGCCATCGTGCTGATTTCCTTGAACGCCGCAATCAGCGCCCGGTCGGAGCTGCTCATCGTGCGGCGGTTCTGATACTTGGCAGTTCCGAATGCGTCGAACGACGCGGGACCAGTGCCGGGACCGATCATGGTGGACAGATCGCCTCCACTGAGCAGCGGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX622332             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGAGGCCATGTAGATGCCGCCTGCCGCCACGGAGATGGACGATCGACCGGGAANGATGTCCATTTCGNCCGCTTTCCGANCTATATGCGTAGCGGCACGCTGTACCACATTTGGTAGGTCCAGGTNGGCGCAGAAGCGGGACATGAAGTCGGCGGTGGTGATGAGATCGACGGAGGTGNCGAGCNCCTTGAGCGTGAGCTTGAAGCAGCGTCNGATCTCCTTTTTGCTGATCTTGCTGACGGCAGCANATCTCTTTGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09KDK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGCCTTGAGCGTGAGCTTGAAGCAGCGTCCGATCTCCTTTTTGCTGATCTTGCTGACGGC GCAGATCTCTTTGAACGTTCGCGGCACGCCCTCCTGCCGGCAGGCGATGTACAGACAGGCGGACGC TTTGGCATCGTTCGAGCGGCCCTTCAGGTTTTTGCCGTCGTGCACCTGCTTGAACAGATTGTTCGCCCGGTCGGTGATCGTTTTCGGCAGGTTAATCCGGTCCGCCATCGTGCTGATTTCCTTGAACGCCGCAATCAGCGCCCGGTCGGAGCTGCTCATCGTGCGGCGGTTCTGATACTTGGCAGTTCCGAATGCGTCGAATGACGCGGGACCAGTGCCGGGACCGATCATGGTGGACAGATCGCCTCCACTGAGCAGCGGGTTTTCCGGCCCACCGACACGGGACGGGTCCACGCCTGCCTTTTCGTTGCTAAACGTACGCCATTCCGAGCCCACGTCGATGACCCGATCGCCCACCACCAGCCCACACTCGGAGCATATCATATCGCCGGCCCGGTAGTCCTCTATCAGTGGTGCCTCCGGGTGCGAGTAGCAGCACACTTTGTTCAAATGGGCGTCCCTTGATGAGCTTGCCATTGTGCCCGCGCCTGTCTCAGTTCCGTTCCCGGGGTAGGAAGTTGCGTTGCCCGCTAGCCCACTGTCGGTGCGAATGTTTGCACTTTGGTGTGTTCTCTGCAAACGGGGGGCCCCACCAAAGTAACAACGTAGCAAACACCACAGCCACCGAGGGCAGCACCAAACGCCAAGCGAACGGAGGGATTTACACGGCTTTG TACGCCGCCACCGATGATGTTTCGTGTTTGTCGTACGGGTAAACACTTAATTAACACAGCGATTGGGCCGTTTGAATGTTTTGAAGCGACGAAAGGTGTGAAAATAA                                                                 ]
[-] EMBL BM582397             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGCAGCGGGTTTTCCGGCCCACCGACACGGGACGGGTCCACGCCTGCCTTTTCGTTGCTAAACGTACGCCATTCCGAGCCCACGTCGATGACCCGATCGCCCACCACCAGCCCACACTCGGAGCATATCATATCGCCGGCCCGGTAGTCCTCTATCAGTGGTGCCTCCGGGTGCGAGTAGCAGCACACTTTGTTCAAATGGGCGTCCCTTGATGAGCTTGCCATTGTGCCCGCGCCTGTCTCAGTTCCGTTCCCGGGGTAGGAAGTTGCGTTGCCCGCTAGCCCACTGTCGGTGCGAATGTTTGCACTTTGGTGTGTTCTCTGCAATCGGGGGGCCCCACCAAAGTAACAACGTAGCAAACACCACAGCCACCGATGGCAGCACCAAACGCCAAGCGAACGGAGGGATTTACACGGCTTTGCTACGCCGACACCGATGATGTTTCGTGTTTGTCGTACGGGTAAACACTTAATTAACACAGCGATTGGGCCGTTTGAATGTTTTGAAGCGACGAAAGGTGTGAAAATAATGTACAATTTTTGGGGTGTCCCGCGCCTTTTGCGTTGATTTGCTTCGCGGCCCACGCGTCCGCGG]


>consensus_8582#0 CTTCTTCTTCTTCTTTTAGGGAGGGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCT TATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTATACAACTGATTCC GCTTGTGTGGTTCTATTCCTTTTTGCTGGGAACAAAACCACGTTCTGTCGATCACTGTGT GTGTATCGTCCTGTGTAATATAGTGAATCCTGTCTATTATCGATTTTAATTCCTTCCCCT AGGAGAGAGAAAAAGGGGAGCGTTGGTGCTTGGTTTTCGTAGCAACAAATCCAATTATAA TTCCTATAAGACCTGATGGTGGTTGTTCGTATGACCTTTTCTGATCTACTCTGCTTGCTT CCCTACCGTGTTCCCGCTCAATCTATACACCGTATTAAATAATTCAATTCATCTGTGGAA AAGTTTGTACTCCCGTTATAGTAGTAGTAGTTGTAGTTTAAAGGGGATTTCAGGGAGGGC ACACACATACATACAAACGCACATACACTATTTGCTGCGATACAGAAATGAGCCAAATGT AAAAAAGGAAACAAAAATTATATAAAAGCAAAGAATTTTTTTTTTGGTAAATCAATACAT TTGGTTGCACACCCAAGCGACTTGGAACAGTTGACAGCATATATGATGCGTTTTTTCCGT AGGGAGTGTGGGTGGTATTGATTTACAGTGTCCCCATCAGCAAATAGATAAGATTTTCTT TGCAGCGTGTGTGCGTGTGTGTGCGAATGTCCTTTAAGCAGGGCGAGATACAGCAGTAGG CTTGGTTAGCTGAAAAAGCCCTCGGAAACCGTGCACATACACACACACAGGGGAGGGTAG GGATGGGGCTTACACCGGGGGCAGCTGATCGATCGGGGTGTGGAAGTTAAAGTCCTCGGG GAACAGTTCGGCCGCGTGCGGGTACATTAACCGGTACGACTGGCGGATCGTGACGTCGGC CACGCCGGCAATGTCGCCGATTTCCTTGTGTGTTTTCTTGTTATCGGACGCTTGCGAGGC CATGTAGATGGCGGCTGCCGCCACGGAGATGGGCGATCGGCCGGGAACGATGTCCATTTC GACCGCTTTCCGAGCTATATGCGTAGCGGCACGCTGTACCACATTTGGTAGGTCCAGGTT GGCGCAGAAGCGGGACATGAAGTCGGCGGTGGTGATGAGATCGACGGAGGTGGCGAGCGC CTTGAGCGTGAGCTTGAAGCAGCGTCCGATCTCCTTTTTGCTGATCTTGCTGACGGCGCA GATCTCTTTGAACGTTCGCGGCACGCCCTCCTGCCGGCAGGCGATGTACAGACAGGCGGA CGCTTTGGCATCGTTCGAGCGGCCCTTCAGGTTTTTGCCGTCGTGCACCTGCTTGAACAG ATTGTTCGCCCGGTCGGTGATCGTTTTCGGCAGGTTAATCCGGTCCGCCATCGTGCTGAT TTCCTTGAACGCCGCAATCAGCGCCCGGTCGGAGCTGCTCATCGTGCGGCGGTTCTGATA CTTGGCAGTTCCGAATGCGTCGAACGACGCGGGACCAGTGCCGGGACCGATCATGGTGGA CAGATCGCCTCCACTGAGCAGCGGGTTTTCCGGCCCACCGACACGGGACGGGTCCACGCC TGCCTTTTCGTTGCTAAACGTACGCCATTCCGAGCCCACGTCGATGACCCGATCGCCCAC CACCAGCCCACACTCGGAGCATATCATATCGCCGGCCCGGTAGTCCTCTATCAGTGGTGC CTCCGGGTGCGAGTAGCAGCACACTTTGTTCAAATGGGCGTCCCTTGATGAGCTTGCCAT TGTGCCCGCGCCTGTCTCAGTTCCGTTCCCGGGGTAGGAAGTTGCGTTGCCCGCTAGCCC ACTGTCGGTGCGAATGTTTGCACTTTGGTGTGTTCTCTGCAAACGGGGGGCCCCACCAAA GTAACAACGTAGCAAACACCACAGCCACCGAGGGCAGCACCAAACGCCAAGCGAACGGAG GGATTTACACGGCTTTGTACGCCGCCACCGATGATGTTTCGTGTTTGTCGTACGGGTAAA CACTTAATTAACACAGCGATTGGGCCGTTTGAATGTTTTGAAGCGACGAAAGGTGTGAAA ATAATGTACAATTTTTGGGGTGTCCCGCGCCTTTTGCGTTGATTTGCTTCGCGGCCCACG CGTCCGCGG



consensusID : consensus_8582#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 547
fasta sequence
                              [GATTTCAGGGAGGGCACACTACATACATACTAACGCACATACANTATTTGCTGCGATACAGTNATGACCAAATGTAAAAAAGGANTACTATTAATTATATNAACCAAAGAAATTTTTTTTGGTAAATCNATACATTTGNTTGCACACCCAAGCGACTTTGGAACAGTTGACAGCATATATGATGCGCTTTTTTCCGTAAGGGAGTGTGGTTGGTATTGATTTACAGTGTGCCCATCAGCAAATAGATAAGATTTTCTTTGCAGCCGTGCGTGTCGTGTGTGAATGTCCGTTNTAAGCAGGGCCGTAGACCACAGCAGTAGCATGGTTAGCTGAAAAAGCCCTCGGAAACCGTGCAACATACACACACACAGGGGAGGTTAGGATGGGGCTTACACCGGGGCCAGCTGATCGATCCGGGGTGTGGAAGTTAAAGTCACTCGGGGAACAGTTCGCCCGCGTGCGGGTACATTAACCGGTACGACTGCCGGATCGTGACGTCGCAACGCCGGCCAATGTCGCCGATTTCTTGTGTTTAACCTCGGGGATT]

[-] EMBL AL933442             [GATTTCAGGGAGGGCACACTACATACATACTAACGCACATACANTATTTGCTGCGATACAGTNATGACCAAATGTAAAAAAGGANTACTATTAATTATATNAACCAAAGAAATTTTTTTTGGTAAATCNATACATTTGNTTGCACACCCAAGCGACTTTGGAACAGTTGACAGCATATATGATGCGCTTTTTTCCGTAAGGGAGTGTGGTTGGTATTGATTTACAGTGTGCCCATCAGCAAATAGATAAGATTTTCTTTGCAGCCGTGCGTGTCGTGTGTGAATGTCCGTTNTAAGCAGGGCCGTAGACCACAGCAGTAGCATGGTTAGCTGAAAAAGCCCTCGGAAACCGTGCAACATACACACACACAGGGGAGGTTAGGATGGGGCTTACACCGGGGCCAGCTGATCGATCCGGGGTGTGGAAGTTAAAGTCACTCGGGGAACAGTTCGCCCGCGTGCGGGTACATTAACCGGTACGACTGCCGGATCGTGACGTCGCAACGCCGGCCAATGTCGCCGATTTCTTGTGTTTAACCTCGGGGATT]


>consensus_8582#1 GATTTCAGGGAGGGCACACTACATACATACTAACGCACATACANTATTTGCTGCGATACA GTNATGACCAAATGTAAAAAAGGANTACTATTAATTATATNAACCAAAGAAATTTTTTTT GGTAAATCNATACATTTGNTTGCACACCCAAGCGACTTTGGAACAGTTGACAGCATATAT GATGCGCTTTTTTCCGTAAGGGAGTGTGGTTGGTATTGATTTACAGTGTGCCCATCAGCA AATAGATAAGATTTTCTTTGCAGCCGTGCGTGTCGTGTGTGAATGTCCGTTNTAAGCAGG GCCGTAGACCACAGCAGTAGCATGGTTAGCTGAAAAAGCCCTCGGAAACCGTGCAACATA CACACACACAGGGGAGGTTAGGATGGGGCTTACACCGGGGCCAGCTGATCGATCCGGGGT GTGGAAGTTAAAGTCACTCGGGGAACAGTTCGCCCGCGTGCGGGTACATTAACCGGTACG ACTGCCGGATCGTGACGTCGCAACGCCGGCCAATGTCGCCGATTTCTTGTGTTTAACCTC GGGGATT



consensusID : consensus_8582#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 466
fasta sequence
                              [GTGTTGCACTGTTTTATTTAGTTTTTATCTTATAAATCAGTTCATTATATGTTTCTAGTTCTTTTTTTTATCTCACCACTTCTTTTCCGCTTCCTTTTTCTTTGTTTGTTCCAACGATGGTGCCCATGTTTTTGTTTTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATTTTACTATTTAAATGTACCGAGGGAGAAAGGGCTCTCTGCTCGCTGTCTCGCAAAGTATCAAAAATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACAACGATAAACAACGAGCGTGAAAATAATACAATTCTTCATCAGGTTTTGTTTTTGCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTTTAGGGAGCGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCTTATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTCGGACGCGTGGGCGG]

[-] EMBL BM596379             [GTGTTGCACTGTTTTATTTAGTTTTTATCTTATAAATCAGTTCATTATATGTTTCTAGTTCTTTTTTTTATCTCACCACTTCTTTTCCGCTTCCTTTTTCTTTGTTTGTTCCAACGATGGTGCCCATGTTTTTGTTTTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATTTTACTATTTAAATGTACCGAGGGAGAAAGGGCTCTCTGCTCGCTGTCTCGCAAAGTATCAAAAATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACAACGATAAACAACGAGCGTGAAAATAATACAATTCTTCATCAGGTTTTGTTTTTGCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTTTAGGGAGCGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCTTATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTCGGACGCGTGGGCGG]


>consensus_8582#2 GTGTTGCACTGTTTTATTTAGTTTTTATCTTATAAATCAGTTCATTATATGTTTCTAGTT CTTTTTTTTATCTCACCACTTCTTTTCCGCTTCCTTTTTCTTTGTTTGTTCCAACGATGG TGCCCATGTTTTTGTTTTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATTTTACTATTT AAATGTACCGAGGGAGAAAGGGCTCTCTGCTCGCTGTCTCGCAAAGTATCAAAAATAATT CCTCATCTAAGTAAATAATCCCTTACAAAAGACAACGATAAACAACGAGCGTGAAAATAA TACAATTCTTCATCAGGTTTTGTTTTTGCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTT TTAGGGAGCGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCTTATTGCGCTCCAAAC TGTGTTCCAAAAGGATGTTTGCGTGTACGCTCGGACGCGTGGGCGG



consensusID : consensus_8582#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 379
fasta sequence
                              [TTTGTTTTGTGTTGCACTGTTTTATTTAGTTTTTATCTTATAAATCAGTTCATTATATGTTTCTAGTTCTTTTTTTTATCTCACCATTTCTTTTCCGCTTCCTTTTTCTTTGTTTGTTCCAACGATGGTGCCCATGTTTTTGTTTTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATTTTACTATTTAAATGTACCGAGGGAGAAAGGGCTCTCTGCTCGCTGTCTCGCAAAGTATCAAAAATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACAACGATAAACAACGAGCGTGAAAATAATACAATTCTTCATCAGGTTTTGTTTTTGCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTANG]

[+] EMBL AGA280507            [TTTGTTTTGTGTTGCACTGTTTTATTTAGTTTTTATCTTATAAATCAGTTCATTATATGTTTCTAGTTCTTTTTTTTATCTCACCATTTCTTTTCCGCTTCCTTTTTCTTTGTTTGTTCCAACGATGGTGCCCATGTTTTTGTTTTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATTTTACTATTTAAATGTACCGAGGGAGAAAGGGCTCTCTGCTCGCTGTCTCGCAAAGTATCAAAAATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACAACGATAAACAACGAGCGTGAAAATAATACAATTCTTCATCAGGTTTTGTTTTTGCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTANG]


>consensus_8582#3 TTTGTTTTGTGTTGCACTGTTTTATTTAGTTTTTATCTTATAAATCAGTTCATTATATGT TTCTAGTTCTTTTTTTTATCTCACCATTTCTTTTCCGCTTCCTTTTTCTTTGTTTGTTCC AACGATGGTGCCCATGTTTTTGTTTTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATTT TACTATTTAAATGTACCGAGGGAGAAAGGGCTCTCTGCTCGCTGTCTCGCAAAGTATCAA AAATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACAACGATAAACAACGAGCGT GAAAATAATACAATTCTTCATCAGGTTTTGTTTTTGCTTCTTCTCTTCTTCTTCTTCTTC TTCTTCTTCTTCTTTTANG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      CTTCTTCTTCTTCTTTTAGGGAGGGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCCT 60
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      TATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTATACAACTGATTCC 120
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GCTTGTGTGGTTCTATTCCTTTTTGCTGGGAACAAAACCACGTTCTGTCGATCACTGTGT 180
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GTGTATCGTCCTGTGTAATATAGTGAATCCTGTCTATTATCGATTTTAATTCCTTCCCCT 240
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      AGGAGAGAGAAAAAGGGGAGCGTTGGTGCTTGGTTTTCGTAGCAACAAATCCAATTATAA 300
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      TTCCTATAAGACCTGATGGTGGTTGTTCGTATGACCTTTTCTGATCTACTCTGCTTGCTT 360
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      CCCTACCGTGTTCCCGCTCAATCTATACACCGTATTAAATAATTCAATTCATCTGTGGAA 420
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      AAGTTTGTACTCCCGTTATAGTAGTAGTAGTTGTAGTTTAAAGGGGATTTCAGGGAGGGC 480
consensus_8582#1      ---------------------------------------------GATTTCAGGGAGGGC 15
                                                                                  

consensus_8582#2      --------------------------------GTGTTGCACTGTTTTATTTAGTTTTTAT 28
consensus_8582#3      ------------------------TTTGTTTTGTGTTGCACTGTTTTATTTAGTTTTTAT 36
consensus_8582#0      ACAC-ACATACATACAAACGCACATACACTATTTGCTGCGATACAGAAATGAG-CCAAAT 538
consensus_8582#1      ACACTACATACATACTAACGCACATACANTATTTGCTGCGATACAGTNATGA--CCAAAT 73
                                                       ** ***  *       * *      **

consensus_8582#2      CTTATAAATCAGT-----TCATTATATGTTT----CTAGTTCTTTTTTT--TATCTCACC 77
consensus_8582#3      CTTATAAATCAGT-----TCATTATATGTTT----CTAGTTCTTTTTTT--TATCTCACC 85
consensus_8582#0      GTAAAAAAGGAAA--CAAAAATTATATAAAAGCAAAGAATTTTTTTTTTGGTAAATCAAT 596
consensus_8582#1      GTAAAAAAGGANTACTATTAATTATATNAAC-CAAAGAAATTTTTTTT-GGTAAATCNAT 131
                       * * ***  *         *******          *  * ******   **  **   

consensus_8582#2      ACTTCT-TTTCCGCTTCCTTTTTCTTT-------GTTTGTTCCAACGATGGTGCCCATGT 129
consensus_8582#3      ATTTCT-TTTCCGCTTCCTTTTTCTTT-------GTTTGTTCCAACGATGGTGCCCATGT 137
consensus_8582#0      ACATTTGGTTGCACACCCAAGCGACTT-GGAACAGTTGACAGCATATATGATGCG-TTTT 654
consensus_8582#1      ACATTTGNTTGCACACCCAAGCGACTTTGGAACAGTTGACAGCATATATGATGCGCTTTT 191
                      *  * *  ** * *  **       **       ***     **   *** ***   * *

consensus_8582#2      TTTTGTT---TTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATT--TTACTATTTAAAT 184
consensus_8582#3      TTTTGTT---TTGTATCCTCTCCTCTCATCCCCTCCCTCCTCATT--TTACTATTTAAAT 192
consensus_8582#0      TTCCGTA-GGGAGTGTGGGTGGTATTGATTTACAGTGTCCCCATCAGCAAATAGATAAGA 713
consensus_8582#1      TTCCGTAAGGGAGTGTGGTTGGTATTGATTTACAGTGTGCCCATCAGCAAATAGATAAGA 251
                      **  **      ** *         * **   *    * * ***     * **  ***  

consensus_8582#2      GTACCGAGGGAGAAAGGGCTCTC-TGCTCGC---TGTCTC------GCAAAGTATCAAA- 233
consensus_8582#3      GTACCGAGGGAGAAAGGGCTCTC-TGCTCGC---TGTCTC------GCAAAGTATCAAA- 241
consensus_8582#0      TTTTCTTTGCAGCGTGTGTGCGTGTGTGTGCGAATGTCC--TTTAAGCAGGGCGAGATAC 771
consensus_8582#1      TTTTCTTTGCAGC-CGTGCGTGT-CGTGTGTGAATGTCCGTTNTAAGCAGGGCCGTAGAC 309
                       *  *   * **   * *       *   *    ****        ***  *    * * 

consensus_8582#2      ---AATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACA-ACGATAAACA-ACGA 288
consensus_8582#3      ---AATAATTCCTCATCTAAGTAAATAATCCCTTACAAAAGACA-ACGATAAACA-ACGA 296
consensus_8582#0      AGCAGTAG--GCTTGGTTAGCTGAAAAAGCCCTCGGAAACCGTGCA-CATACACACACAC 828
consensus_8582#1      CACAGCAGTAGCATGGTTAGCTGAAAAAGCCCTCGGAAACCGTGCAACATACACACACAC 369
                         *  *    *     **  * ** ** ****   ***      *  *** *** **  

consensus_8582#2      GCGTGAAAATAAT-ACAATTCTT-CATCAGGTTTTGTTTTTGCTTC--TTCTCTTCTTCT 344
consensus_8582#3      GCGTGAAAATAAT-ACAATTCTT-CATCAGGTTTTGTTTTTGCTTC--TTCTCTTCTTCT 352
consensus_8582#0      AGGGGAGGGTAGGGATGGGGCTTACACCGGGGGCAGCTGATCGATC-GGGGTGTGGAAGT 887
consensus_8582#1      AGGGGAGGTTAGG-ATGGGGCTTACACCGGGGCCAGCTGATCGATCCGGGGTGTGGAAGT 428
                        * **   **   *     *** ** * **    * *  *   **     * *     *

consensus_8582#2      TCTTCTTCTTCTTCTTTTAGGGAGCGGGATGGAGGGTGGAGTGATGGTCAAGAGCCGCCC 404
consensus_8582#3      TCTTCTTCTTCTTCTTCTTCTTTTANG--------------------------------- 379
consensus_8582#0      TAAAGTC-CTCGGGGAACAGTTCGGCCGCGTGCGGGTACATTAACCGGTACGACTGGCGG 946
consensus_8582#1      TAAAGTCACTCGGGGAACAGTTCGCCCGCGTGCGGGTACATTAACCGGTACGACTGCCGG 488
                      *    *   **                                                 

consensus_8582#2      TTATTGCGCTCCAAACTGTGTTCCAAAAGGATGTTTGCGTGTACGCTCGGACGCGTGGGC 464
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      ATCGTGACGTCGGCCACGCCGGC-AATGTCGCCGATTTCCTTGTGTGTTTTCTTGTTATC 1005
consensus_8582#1      ATCGTGACGTCG-CAACGCCGGCCAATGTCGCCGATTTC-TTGTGTTTAACCTCGGGGAT 546
                                                                                  

consensus_8582#2      GG---------------------------------------------------------- 466
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GGACGCTTGCGAGGCCATGTAGATGGCGGCTGCCGCCACGGAGATGGGCGATCGGCCGGG 1065
consensus_8582#1      T----------------------------------------------------------- 547
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      AACGATGTCCATTTCGACCGCTTTCCGAGCTATATGCGTAGCGGCACGCTGTACCACATT 1125
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      TGGTAGGTCCAGGTTGGCGCAGAAGCGGGACATGAAGTCGGCGGTGGTGATGAGATCGAC 1185
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GGAGGTGGCGAGCGCCTTGAGCGTGAGCTTGAAGCAGCGTCCGATCTCCTTTTTGCTGAT 1245
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      CTTGCTGACGGCGCAGATCTCTTTGAACGTTCGCGGCACGCCCTCCTGCCGGCAGGCGAT 1305
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GTACAGACAGGCGGACGCTTTGGCATCGTTCGAGCGGCCCTTCAGGTTTTTGCCGTCGTG 1365
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      CACCTGCTTGAACAGATTGTTCGCCCGGTCGGTGATCGTTTTCGGCAGGTTAATCCGGTC 1425
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      CGCCATCGTGCTGATTTCCTTGAACGCCGCAATCAGCGCCCGGTCGGAGCTGCTCATCGT 1485
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GCGGCGGTTCTGATACTTGGCAGTTCCGAATGCGTCGAACGACGCGGGACCAGTGCCGGG 1545
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      ACCGATCATGGTGGACAGATCGCCTCCACTGAGCAGCGGGTTTTCCGGCCCACCGACACG 1605
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GGACGGGTCCACGCCTGCCTTTTCGTTGCTAAACGTACGCCATTCCGAGCCCACGTCGAT 1665
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GACCCGATCGCCCACCACCAGCCCACACTCGGAGCATATCATATCGCCGGCCCGGTAGTC 1725
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      CTCTATCAGTGGTGCCTCCGGGTGCGAGTAGCAGCACACTTTGTTCAAATGGGCGTCCCT 1785
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      TGATGAGCTTGCCATTGTGCCCGCGCCTGTCTCAGTTCCGTTCCCGGGGTAGGAAGTTGC 1845
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GTTGCCCGCTAGCCCACTGTCGGTGCGAATGTTTGCACTTTGGTGTGTTCTCTGCAAACG 1905
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GGGGGCCCCACCAAAGTAACAACGTAGCAAACACCACAGCCACCGAGGGCAGCACCAAAC 1965
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      GCCAAGCGAACGGAGGGATTTACACGGCTTTGTACGCCGCCACCGATGATGTTTCGTGTT 2025
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      TGTCGTACGGGTAAACACTTAATTAACACAGCGATTGGGCCGTTTGAATGTTTTGAAGCG 2085
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------------------------------------------
consensus_8582#3      ------------------------------------------------------------
consensus_8582#0      ACGAAAGGTGTGAAAATAATGTACAATTTTTGGGGTGTCCCGCGCCTTTTGCGTTGATTT 2145
consensus_8582#1      ------------------------------------------------------------
                                                                                  

consensus_8582#2      ------------------------
consensus_8582#3      ------------------------
consensus_8582#0      GCTTCGCGGCCCACGCGTCCGCGG 2169
consensus_8582#1      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)