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Anopheles gambiae
cluster # 8592 cluster # 8592       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8592#0 length = 1118 sequences # 8  
consensus_8592#1 length = 842 sequences # 1  
consensus_8592#2 length = 691 sequences # 1  
consensus_8592#3 length = 654 sequences # 1  

consensusID : consensus_8592#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1118
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGTGACCAAATTCCAACAAATGGAAAACGATGGCGAGCAGATAAAAAGGTTTGTTTTCG-GTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTG-GCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATA-G-GAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTCAAAAAGTGGGACCTGGTATGTTCCGTGATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGGCAACCATACCGTGCACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTAAGTCGAGTGATTAGCCACAACCGATAAACTGCCATGTCTTCCACCACAGCTGCCGCCAGTACCATCGCCCGAGGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTCAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTAATTTTTGACAAGTCGACCGGCATCAGTCGCGGCTACGGGTTCATCGTGTTCAGTACGCGGGAGGGCTTCACCAATGCCACCAACAACCGTTGCACGTGCTCGAGGGACGTGTGCTGGACTTGCAACCTGCCTCTTCTTAAAATTAAACATAAATTCTAGCTACATAGCAAAGGGGG]

[+] EMBL BM581977             [CCGCGGACGCGTGGGCGGACGCGTGGGTGACCAAATTCCAACAAATGGAAAACGATGGCGAGCAGATAAAAAGGTTTGTTTTCG GTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTG GCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATA G GAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM650139             [                           ccgCCAAATTCCAACAAATGGAAAACGATGGCGAGCAGATAAAAAGGTTTGTTTTCG GTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTG GCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATA G GAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTGGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCTAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTCAAAAAGTGGGACCTGGTATGTTCCGTGATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09NNR             [                                   TTCCAACAAATGGAAAACGATGGCGAGCAGATAAAAAGGTTTGTTTTCGCGTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTG GCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATA G GAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCGCTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCAGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGTGAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09PPB             [                                               GAAAATGATGGCGAGCAGATAAAAAGGTTTGTTTTTG GTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTG GCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATA G GAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCGCTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCAGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTCAAAAAGTGGGACCTGGTGTGCTCCGTGATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGGCAACCATACCGTGCACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTCAGTCGAGTGATTAGCCACAACCGATACACTGCCATGTCTTCCACCACAGCTGCCGCCAGTTCCATCGCCCGAGGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTCAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTAATCTATGACAAGTCGACCGGCATCAGTAGCGGCT                                                                                                                                              ]
[+] EMBL AL931736             [                                                                                           AATCTAGGCAC GGGCCTCGTATGTTNGTGAAAAGCTGGNAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTGTGCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACT GAGATATGTGAGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM583132             [                                                                                                                                                                 ATATTCGTTCTACACCTG GCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATA G GAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09PPC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCCACCCCCAAGAGTTTATGGGCAACCATACCGTGAACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTAAGTCGAGTGATTAGCCACAACCGATAAACTGCCATTTCTTCCACAACAGCTGCCCCCAGTACCATCGCCCGAGGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTCAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTAATTTTTGACAAGTCGACCGGCCTAAGTCGCGGCTACGGGTTCATCGTGTTCAGTACGCGGGAGGGCTTCACCAATGCCACCAACAACCGT                                                                                      ]
[-] EMBL CNS09NNS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTGCACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTAAGTCGAGTGATTAGCCACAACCGATAAACTGCCATGTCTTCCACCACAGCTGCCGCCAGTACCATCGCCCGAGGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTCAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTAATTTTTGACAAGTCGACCGGCATCAGTCGCGGCTACGGGTTCATCGTGTTCAGTACGCGGGAGGGCTTCACCAATGCCACCAACAACCGTTGCACGTGCTCGAGGGACGTGTGCTGGACTTGCAACCTGCCTCTTCTTAAAATTAAACATAAATTCTAGCTACATAGCAAAGGGGG]


>consensus_8592#0 CCGCGGACGCGTGGGCGGACGCGTGGGTGACCAAATTCCAACAAATGGAAAACGATGGCG AGCAGATAAAAAGGTTTGTTTTCGGTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTG AAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTGGC CCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGC GGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGG CTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCT GCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGA CGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATCCTCGGCT CGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCTAGTGACGATATCATTCATAC TCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGT GTATCGAGAATCTGCTCAAAAAGTGGGACCTGGTATGTTCCGTGATTAGCTTGGACAATC TGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGGCAACCATACCGTGCACTTGC TGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTAAGTCGAGTGATT AGCCACAACCGATAAACTGCCATGTCTTCCACCACAGCTGCCGCCAGTACCATCGCCCGA GGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTCAGCACAAAGGAGCTGAAA ACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTAATTTTTGACAAGTCGACC GGCATCAGTCGCGGCTACGGGTTCATCGTGTTCAGTACGCGGGAGGGCTTCACCAATGCC ACCAACAACCGTTGCACGTGCTCGAGGGACGTGTGCTGGACTTGCAACCTGCCTCTTCTT AAAATTAAACATAAATTCTAGCTACATAGCAAAGGGGG



consensusID : consensus_8592#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 842
fasta sequence
                              [ACCACACGCGGAGAATAAGTTTCTATCCGATTCCGTTGCTTTGCAGCTTCCACTGCCAGGATATTCGTTCTACACCTGGCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTAAAAAAGTGGGACCTGGTGTGTTCCGTGATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGGCAACCATACCGTGCACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTCAGTCGAGTGATTAGCCACAACCGATACACTGCCATGTCTTCCACCACAGCTGCCGCCAGCACCATCGCCCGANGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTTAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTA]

[+] EMBL BX624870             [ACCACACGCGGAGAATAAGTTTCTATCCGATTCCGTTGCTTTGCAGCTTCCACTGCCAGGATATTCGTTCTACACCTGGCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCTAGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTAAAAAAGTGGGACCTGGTGTGTTCCGTGATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGGCAACCATACCGTGCACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGTCGTCGGTCAGTCGAGTGATTAGCCACAACCGATACACTGCCATGTCTTCCACCACAGCTGCCGCCAGCACCATCGCCCGANGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGGTTAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACGTA]


>consensus_8592#1 ACCACACGCGGAGAATAAGTTTCTATCCGATTCCGTTGCTTTGCAGCTTCCACTGCCAGG ATATTCGTTCTACACCTGGCCCTCTGCCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCG GCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCT GCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAAC CTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGA CATCGAGGTTATCGGGCTGACGTGGGGACTGTTTCTGGATCAGGTGTTGCAGCTCGGCCC ACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGTGTTTGAGGAAATCCT AGTGACGATATCATTCATACTCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCA GGAACGGAGCGCCGACTGGTGTATCGAGAATCTGCTAAAAAAGTGGGACCTGGTGTGTTC CGTGATTAGCTTGGACAATCTGAGCGAGGATCTCGGTGTCGACCCGCAAGAGTTGATGGG CAACCATACCGTGCACTTGCTGGAAATAGTACGAAAGCCTATCGGATAAAATCAAACGGT CGTCGGTCAGTCGAGTGATTAGCCACAACCGATACACTGCCATGTCTTCCACCACAGCTG CCGCCAGCACCATCGCCCGANGGGTGCAAAAACTGTTCGTGGGCAACCTACCGTGGACGG TTAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGTCCATTCGACCAACG TA



consensusID : consensus_8592#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [GAATCGCCGAGGNTAATGACAAATTCAACAATGGAAAACGATGGCGAGCAGATAAAAAGGTTTGTTTTCGGTAGGCAAATCTAGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCGCAGGATATTCGTTCTACACCTGGCCCTCTGGCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGTGCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGTGGTGCTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTATCTGGATCAGGTGTTGCAGCTCGGCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGGTCGGGTGTATGAGGAAAGTCCCTAGGTGACGANTATCACTTCATACNTCGAGGGCGAATCCGGGGAGCGCAAATTACATCTGCACCTATCACGGAATCGGAGCGCCGACTGGTGTATCCGAGAATANTGCNTAAAAAAGGTGGGAACCTGGTGTGTTCCCGTGGATTAGGCTTGGGACAATCTGNAGCGAGGATNNNCGG]

[+] EMBL AL933068             [GAATCGCCGAGGNTAATGACAAATTCAACAATGGAAAACGATGGCGAGCAGATAAAAAGGTTTGTTTTCGGTAGGCAAATCTAGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCGCAGGATATTCGTTCTACACCTGGCCCTCTGGCCCGGTGTTGGCGTGGTTTCTCTGGGAACGGCGTGCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGTGGTGCTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTATCTGGATCAGGTGTTGCAGCTCGGCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGGTCGGGTGTATGAGGAAAGTCCCTAGGTGACGANTATCACTTCATACNTCGAGGGCGAATCCGGGGAGCGCAAATTACATCTGCACCTATCACGGAATCGGAGCGCCGACTGGTGTATCCGAGAATANTGCNTAAAAAAGGTGGGAACCTGGTGTGTTCCCGTGGATTAGGCTTGGGACAATCTGNAGCGAGGATNNNCGG]


>consensus_8592#2 GAATCGCCGAGGNTAATGACAAATTCAACAATGGAAAACGATGGCGAGCAGATAAAAAGG TTTGTTTTCGGTAGGCAAATCTAGCACGGGGCCTCGTATGTGGGTGAAAAGCTGGAAATA CTCATACCGGAGCTTCCACTGCGCAGGATATTCGTTCTACACCTGGCCCTCTGGCCCGGT GTTGGCGTGGTTTCTCTGGGAACGGCGTGCACTCGCTCATCAACAAGCGGATACTGGAGA TAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGTGGTGCTCACGTAAC ACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCAACGCTGCTGCAGGCT GAACAATTTAGTTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGAC TGTATCTGGATCAGGTGTTGCAGCTCGGCCACTGGATCTGATCCTCGGCTCGGACGTGTT CTACGACCCGGTCGGGTGTATGAGGAAAGTCCCTAGGTGACGANTATCACTTCATACNTC GAGGGCGAATCCGGGGAGCGCAAATTACATCTGCACCTATCACGGAATCGGAGCGCCGAC TGGTGTATCCGAGAATANTGCNTAAAAAAGGTGGGAACCTGGTGTGTTCCCGTGGATTAG GCTTGGGACAATCTGNAGCGAGGATNNNCGG



consensusID : consensus_8592#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 654
fasta sequence
                              [GGCAGAATCGGCACGATTGGCTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTGGCCCTCTGCCCCGGTGTTGGCGTAGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTNNTCTGGATCAGGTGTTGCAGCTCGGNCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGGTGTTTGAGGAAATCCTAGTGACGATATCAGTTCATACATCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTAGCTCAAACAAGTGGGACCTGGATGTAGTNCCGTGCATTAGCGTTGGACAATCTGAGGCGAGGGATCTCGGGGTAGTACGAANCCCGGGAAGGAGGTNTGACTGGGGGCAAGCCNTTACCGGTGCAACTTGCTTGGANACTAGTACGAAA]

[+] EMBL BX467597             [GGCAGAATCGGCACGATTGGCTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACACCTGGCCCTCTGCCCCGGTGTTGGCGTAGGTTTCTCTGGGAACGGCGGCACTCGCTCATCAACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATCGGGCTGACGTGGGGACTGTNNTCTGGATCAGGTGTTGCAGCTCGGNCCACTGGATCTGATCCTCGGCTCGGACGTGTTCTACGACCCGTCGGGTGTTTGAGGAAATCCTAGTGACGATATCAGTTCATACATCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAGCGCCGACTGGTGTATCGAGAATCTAGCTCAAACAAGTGGGACCTGGATGTAGTNCCGTGCATTAGCGTTGGACAATCTGAGGCGAGGGATCTCGGGGTAGTACGAANCCCGGGAAGGAGGTNTGACTGGGGGCAAGCCNTTACCGGTGCAACTTGCTTGGANACTAGTACGAAA]


>consensus_8592#3 GGCAGAATCGGCACGATTGGCTCATACCGGAGCTTCCACTGCCAGGATATTCGTTCTACA CCTGGCCCTCTGCCCCGGTGTTGGCGTAGGTTTCTCTGGGAACGGCGGCACTCGCTCATC AACAAGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAG TGTGGGGCTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATC CAACGCTGCTGCAGGCTGAACAATTTAGTGCCCGGCCCGGGCAAGGACATCGAGGTTATC GGGCTGACGTGGGGACTGTNNTCTGGATCAGGTGTTGCAGCTCGGNCCACTGGATCTGAT CCTCGGCTCGGACGTGTTCTACGACCCGTCGGGTGTTTGAGGAAATCCTAGTGACGATAT CAGTTCATACATCGAGGCGAATCCGGGAGCGAAATTCATCTGCACCTATCAGGAACGGAG CGCCGACTGGTGTATCGAGAATCTAGCTCAAACAAGTGGGACCTGGATGTAGTNCCGTGC ATTAGCGTTGGACAATCTGAGGCGAGGGATCTCGGGGTAGTACGAANCCCGGGAAGGAGG TNTGACTGGGGGCAAGCCNTTACCGGTGCAACTTGCTTGGANACTAGTACGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8592#1      ------------------------------------------------------------
consensus_8592#3      ------------------------------------------------------------
consensus_8592#0      CCGCGGACGCGTGGGCGGACGCGTGGGTGACCAAATTCCAACAAATGGAAAACGATGGCG 60
consensus_8592#2      --------------GAATCGCCGAGGNTAATGACAAATTCAACAATGGAAAACGATGGCG 46
                                                                                  

consensus_8592#1      ---------------------------------------ACCACACGCGGAGAATAAGT- 20
consensus_8592#3      -----------------------------------------------------GGCAGA- 6
consensus_8592#0      AGCAGATAAAAAGGTTTGTTTTCGGTAGCAAATCTAGGCACGGGGCCTCGTATGTGGGTG 120
consensus_8592#2      AGCAGATAAAAAGGTTTGTTTTCGGTAGGCAAATCTAGCACGGGGCCTCGTATGTGGGTG 106
                                                                               *  

consensus_8592#1      TTCTATCCGATTCCGTTGCTTTGCAGCTTCCACTGC-CAGGATATTCGTTCTACACCTGG 79
consensus_8592#3      ATCGGCACGATTGGCTCATACCGGAGCTTCCACTGC-CAGGATATTCGTTCTACACCTGG 65
consensus_8592#0      AAAAGCTGGAAATACTCATACCGGAGCTTCCACTGC-CAGGATATTCGTTCTACACCTGG 179
consensus_8592#2      AAAAGCTGGAAATACTCATACCGGAGCTTCCACTGCGCAGGATATTCGTTCTACACCTGG 166
                              **     *      * ************ ***********************

consensus_8592#1      CCCTCTGCCCCGGTGTTGGCGT-GGTTTCTCTGGGAACGGCG-GCACTCGCTCATCAACA 137
consensus_8592#3      CCCTCTGCCCCGGTGTTGGCGTAGGTTTCTCTGGGAACGGCG-GCACTCGCTCATCAACA 124
consensus_8592#0      CCCTCTGCCCCGGTGTTGGCGT-GGTTTCTCTGGGAACGGCG-GCACTCGCTCATCAACA 237
consensus_8592#2      CCCTCTGGCCCGGTGTTGGCGT-GGTTTCTCTGGGAACGGCGTGCACTCGCTCATCAACA 225
                      ******* ************** ******************* *****************

consensus_8592#1      AGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTG 197
consensus_8592#3      AGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTG 184
consensus_8592#0      AGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTG 297
consensus_8592#2      AGCGGATACTGGAGATAGGAGCCGGCACAGCACTGCCGGGTCTGCTGGCTGCCAAGTGTG 285
                      ************************************************************

consensus_8592#1      GGG--CTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCA 255
consensus_8592#3      GGG--CTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCA 242
consensus_8592#0      GGG--CTCACGTAACACTCAGCGATTGCAGTACGCTACCGAAAACCTTGGAACACATCCA 355
consensus_8592#2      TGGTGCTCACGTAACACTCAGCGATTGCAGTACGCTCCCAAAAACCTTGGAACACATCCA 345
                       **  ******************************* ** ********************

consensus_8592#1      ACGCTGCTGCAGGCTGAACAATTTAGT-GCCCGGCCCGGGCAAGGACATCGAGGTTATCG 314
consensus_8592#3      ACGCTGCTGCAGGCTGAACAATTTAGT-GCCCGGCCCGGGCAAGGACATCGAGGTTATCG 301
consensus_8592#0      ACGCTGCTGCAGGCTGAACAATTTAGT-GCCCGGCCCGGGCAAGGACATCGAGGTTATCG 414
consensus_8592#2      ACGCTGCTGCAGGCTGAACAATTTAGTTGCCCGGCCCGGGCAAGGACATCGAGGTTATCG 405
                      *************************** ********************************

consensus_8592#1      GGCTGACGTGGGGACTGTTT-CTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATC 373
consensus_8592#3      GGCTGACGTGGGGACTGTNNTCTGGATCAGGTGTTGCAGCTCGGNCCACTGGATCTGATC 361
consensus_8592#0      GGCTGACGTGGGGACTGTTT-CTGGATCAGGTGTTGCAGCTCGGCCCACTGGATCTGATC 473
consensus_8592#2      GGCTGACGTGGGGACTGTAT-CTGGATCAGGTGTTGCAGCTCGGCC-ACTGGATCTGATC 463
                      ******************   *********************** * *************

consensus_8592#1      CTCGGCTCGGACGTGTTCTACGACCCG-TCGG-TGTTTGAGGAAA--TCCTAG-TGACGA 428
consensus_8592#3      CTCGGCTCGGACGTGTTCTACGACCCG-TCGGGTGTTTGAGGAAA--TCCTAG-TGACGA 417
consensus_8592#0      CTCGGCTCGGACGTGTTCTACGACCCG-TCGG-TGTTTGAGGAAA--TCCTAG-TGACGA 528
consensus_8592#2      CTCGGCTCGGACGTGTTCTACGACCCGGTCGGGTGTATGAGGAAAGTCCCTAGGTGACGA 523
                      *************************** **** *** ********   ***** ******

consensus_8592#1      T-ATCA-TTCATAC-TCGAGG-CGAATCCGGGA---GCGAAATTCATCTGCACCTATCAG 481
consensus_8592#3      T-ATCAGTTCATACATCGAGG-CGAATCCGGGA---GCGAAATTCATCTGCACCTATCAG 472
consensus_8592#0      T-ATCA-TTCATAC-TCGAGG-CGAATCCGGGA---GCGAAATTCATCTGCACCTATCAG 581
consensus_8592#2      NTATCACTTCATACNTCGAGGGCGAATCCGGGGAGCGCAAATTACATCTGCACCTATCAC 583
                        **** ******* ****** **********    ** ** * *************** 

consensus_8592#1      GAA--CGGAGCGCCGACTGGTGTATC-GAGAAT-CTG--CTAAAAAAGTGGGACCTGG-T 534
consensus_8592#3      GAA--CGGAGCGCCGACTGGTGTATC-GAGAAT-CTAGCTCAAACAAGTGGGACCTGGAT 528
consensus_8592#0      GAA--CGGAGCGCCGACTGGTGTATC-GAGAAT-CTG--CTCAAAAAGTGGGACCTGG-T 634
consensus_8592#2      GGAATCGGAGCGCCGACTGGTGTATCCGAGAATANTGCNTAAAAAAGGTGGGAACCTGGT 643
                      * *  ********************* ******  *      ** * ****** *  * *

consensus_8592#1      GT-GTTCCGTG-ATTAGC-TTGG-ACAATCTGAG-CGAGG-ATCTCGGTGTCGACCCGCA 588
consensus_8592#3      GTAGTNCCGTGCATTAGCGTTGG-ACAATCTGAGGCGAGGGATCTCGGGGTAG---TACG 584
consensus_8592#0      AT-GTTCCGTG-ATTAGC-TTGG-ACAATCTGAG-CGAGG-ATCTCGGTGTCGACCCGCA 688
consensus_8592#2      GTGTTCCCGTGGATTAGGCTTGGGACAATCTGNAGCGAGGATNNNCGG------------ 691
                       *  * ***** *****  **** ********   *****     ***            

consensus_8592#1      AGAGTTGATGGGCAACCAT-ACCGTGCACTTGCTGGAAATAGTACGAAA-GCCTATCGGA 646
consensus_8592#3      AANCCCGGGAAGGAGGTNTGACTGGGGGCAAGCCNTTACCGGTGCAACTTGCTTGGANAC 644
consensus_8592#0      AGAGTTGATGGGCAACCAT-ACCGTGCACTTGCTGGAAATAGTACGAAA-GCCTATCGGA 746
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      TAAAATCAAACGGTCGTCGGTCAGTCGAGTGATTAGCCACAACCGATACACTGCCATGTC 706
consensus_8592#3      TAGTACGAAA-------------------------------------------------- 654
consensus_8592#0      TAAAATCAAACGGTCGTCGGTAAGTCGAGTGATTAGCCACAACCGATAAACTGCCATGTC 806
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      TTCCACCACAGCTGCCGCCAGCACCATCGCCCGANGGGTGCAAAAACTGTTCGTGGGCAA 766
consensus_8592#3      ------------------------------------------------------------
consensus_8592#0      TTCCACCACAGCTGCCGCCAGTACCATCGCCCGAGGGGTGCAAAAACTGTTCGTGGGCAA 866
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      CCTACCGTGGACGGTTAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGT 826
consensus_8592#3      ------------------------------------------------------------
consensus_8592#0      CCTACCGTGGACGGTCAGCACAAAGGAGCTGAAAACGTACTTCTCCAAGTACGGTCACGT 926
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      CCATTCGACCAACGTA-------------------------------------------- 842
consensus_8592#3      ------------------------------------------------------------
consensus_8592#0      CCATTCGACCAACGTAATTTTTGACAAGTCGACCGGCATCAGTCGCGGCTACGGGTTCAT 986
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      ------------------------------------------------------------
consensus_8592#3      ------------------------------------------------------------
consensus_8592#0      CGTGTTCAGTACGCGGGAGGGCTTCACCAATGCCACCAACAACCGTTGCACGTGCTCGAG 1046
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      ------------------------------------------------------------
consensus_8592#3      ------------------------------------------------------------
consensus_8592#0      GGACGTGTGCTGGACTTGCAACCTGCCTCTTCTTAAAATTAAACATAAATTCTAGCTACA 1106
consensus_8592#2      ------------------------------------------------------------
                                                                                  

consensus_8592#1      ------------
consensus_8592#3      ------------
consensus_8592#0      TAGCAAAGGGGG 1118
consensus_8592#2      ------------
                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)