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Anopheles gambiae
cluster # 8613 cluster # 8613       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8613#0 length = 1160 sequences # 7  
consensus_8613#1 length = 590 sequences # 1  
consensus_8613#2 length = 544 sequences # 1  
consensus_8613#3 length = 508 sequences # 1  
consensus_8613#4 length = 462 sequences # 1  

consensusID : consensus_8613#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1160
fasta sequence
                              [GATCCCCGAGGGATTCCAAAGCTCGTATGTCCACAGATAATTGCTCATGTATTGTAAACTTTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCT-CTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTTCATAGTGACCAGAATCATTAATCCTATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTACCTAGGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGGTTCCTGGCAATTGATGAGATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCAGCGCATTAAGCTGTATTATGGCAGTAAGGATGGATGGGTACCGGTACAGTACTACCATGATCTGAAGCAACGTATCCCAGATATTGATGCTGAACTGTGCACCAGGAACTATGAGCATGCATTTGTATTACGTTCAGCGGCTCAGATGGGCTTTTCTGTCGGTGAGTGGATCTTAAAATATCGTGCATAAAACTTTTTTCTTTGTTGAGAAACAATGGCCTGGCCGTGATGCTTTATAATCAAATCAATCTAGATAAATAGTAACGGGT]

[+] EMBL AL693751             [GATCCCCGAGGGATTCCAAAGCTCGTATGTCCACAGATAATTGCTCATGTATTGTAAACTTTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAAAGGGAACGAAGAAATGTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM602349             [                               ccgAGATAATTGCTCATGTATTGTAAACTTTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCT CTTTCCCACCCTGGAACGGATGGCCAAATCGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09EUM             [                                                          CTTTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCT CTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTTCATAGTGACCAGAATCATTAATCCTATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTACCTAGGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGGTTCCTGGCAATTGATGAGATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCAGCGCATTAAGCTGTATTATGGCAGTCAGGATGGATGGGTACCGGTACAGTACTACCATGATCTGAAGCAACGTATCCCAGATATTGATGCTGAACTGTGCACAAGGCACTATGAGCATGCATTTGTATTACGTTCAGCGGCTCAGA                                                                                                                           ]
[+] EMBL CNS094ET             [                                                          CTTTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCT CTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGCTTCATAGTGACCAGAGTCATTAATCCTATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTAAAAAAAAAGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAACATATGGTTCCTGGCAATTGATGAGATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCAGCGCATTAAGCTGTATTATGGCAGTAAGGATGGATGGGTACAGGTAAAG                                                                                                                                                                                                                            ]
[-] EMBL CNS09EUN             [                                                                                                                                                                                                      ACTAACGTGGGGTAAGTGGATCGAAAAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGTTCAGGCGGGGCACGATAAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTTACATAAGCGACCGCATTCAACATTGCTACTTTCT CTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTTCATAGTGACCAGAATCATTAATCCTATTTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTACCTAGGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGGTTCCTGGCAATTGATGAGATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCAGCGCATTAAGCTGTATTATGGCAGTAAGGATGGATGGGTACCGGTACAGTACTACCATGATCTGAAGCAACGTATCCCAGATATTGATGCTGAACTGTGCACCAGGAACTATGAGCATGCATTTTTATTACGTTCAGCGGCTCAGATGGGCTTTTCTGTCGGTGAGTGGATCTTAAAATATCGTGCATAAAACTTTTTTCTTTGTTGAGAAACAATGGCCTGGCCGTGATGCTTTATAATCAAATCAATCTAGATAAATAGTA      ]
[+] EMBL BX608515             [                                                                                                                                                                                                             TGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTT  ACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTACCAGTGTGGGTAATAGGTCAGGCGGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAGCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCT CTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTTCATAGTGACCAGAATCATTAATCCTATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTACCTAGGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGTTTCCTGGCAATTGATGAGATGGAAAAGGTAAAGGACCTGGATATGGATACTCTCATCAAGAACAAGCAGCGCATTAAGCTGTATTATGGCAGTAAGGATGGATGGGTGCCGGTACAGTA                                                                                                                                                                                                                          ]
[-] EMBL CNS094EU             [                                                                                                                                                                                                                                           GATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGG GCCCCCATTGAAAGGGTTTTTTGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTGCTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGCTTCATAGTGACCAGAGTCATTAATCCTATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTACCTAGGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGGTTCCTGGCAATTGATGAGATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCAGCGCATTAAGCTGTATTATGGCAGTAAGGATGGATGGGTACCGGTACAGTACTACCATGATCTGAAGCAACGTATCCCAGATATTGATGCTGAACTGTGCACCAGGAACTATGAGCATGCATTTGTATTACGTTCAGCGGCTCAGATGGGCTTTTCTGTCGGTGAGTGGATCTTAAAATATCGTGCATAAAACTTTTTTCTTTGTTGAGAAACAATGGCCTGGCCGTGATGCTTTATAATCAAATCAATCTAGATAAATAGTAACGGGT]


>consensus_8613#0 GATCCCCGAGGGATTCCAAAGCTCGTATGTCCACAGATAATTGCTCATGTATTGTAAACT TTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTAC TCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGC AAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCA GAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTT TCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGC GGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAA CGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTA CGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCT GGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTCTTTCC CACCCTGGAACGGATGGCCAAATCGAGGAACGGTTTCATAGTGACCAGAATCATTAATCC TATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTTGTTTATCCG GACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTACCTAGGAAC CGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGGTTCCTGGCAATTGATGA GATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCAGCGCATTAA GCTGTATTATGGCAGTAAGGATGGATGGGTACCGGTACAGTACTACCATGATCTGAAGCA ACGTATCCCAGATATTGATGCTGAACTGTGCACCAGGAACTATGAGCATGCATTTGTATT ACGTTCAGCGGCTCAGATGGGCTTTTCTGTCGGTGAGTGGATCTTAAAATATCGTGCATA AAACTTTTTTCTTTGTTGAGAAACAATGGCCTGGCCGTGATGCTTTATAATCAAATCAAT CTAGATAAATAGTAACGGGT



consensusID : consensus_8613#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [CCGCAGGTTATGCTGCATCGTTCGGTCGACCTTTATTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGCTGGATCGAAGAATCGCTATGGCGATCAGAAGGAAATCGTGCTAGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCAGTGTGGGTAATAGGTCAGGCGCGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAACAGGGAACGAAGAAACTGTTTAACTTAAAAGGACAGCCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAACAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAACAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTCTTTACCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTATCATAGTGACCAGAATCATTAATCCTATG]

[+] EMBL AL693000             [CCGCAGGTTATGCTGCATCGTTCGGTCGACCTTTATTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGCTGGATCGAAGAATCGCTATGGCGATCAGAAGGAAATCGTGCTAGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCAGTGTGGGTAATAGGTCAGGCGCGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAACAGGGAACGAAGAAACTGTTTAACTTAAAAGGACAGCCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAACAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAACAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTCTTTACCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTATCATAGTGACCAGAATCATTAATCCTATG]


>consensus_8613#1 CCGCAGGTTATGCTGCATCGTTCGGTCGACCTTTATTCCGTACAGACAAACCGGCAATAC GGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAAC GTGGGGTAAGCTGGATCGAAGAATCGCTATGGCGATCAGAAGGAAATCGTGCTAGTGCAT TACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATATGAGTG CTTGAACAAAGAACTGCAGTGTGGGTAATAGGTCAGGCGCGGCCACGATGAAGCAGATGA AAGCCCGTACAAGAAACCGGTGCCCGCATTGAACAGGGAACGAAGAAACTGTTTAACTTA AAAGGACAGCCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAA CAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAACAGTT CCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTCTTTACCCACCCTGGAACGGAT GGCCAAATCGAGGAACGGTTATCATAGTGACCAGAATCATTAATCCTATG



consensusID : consensus_8613#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence
                              [CCGCGGACGCGTGGGTCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTCTTTCCACCCTGGAACGGATGGCCAAATCGAGGAA]

[+] EMBL BM588027             [CCGCGGACGCGTGGGTCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTTTCTCTTTCCACCCTGGAACGGATGGCCAAATCGAGGAA]


>consensus_8613#2 CCGCGGACGCGTGGGTCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACG GCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACG TGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACC GGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTG AACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGC CCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGA CAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCAT CTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGACATA AGCGACCGCATTCAACATTGCTACTTTCTCTTTCCACCCTGGAACGGATGGCCAAATCGA GGAA



consensusID : consensus_8613#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 508
fasta sequence
                              [CCGCCCACGCGTCCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGA]

[+] EMBL BM620953             [CCGCCCACGCGTCCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGCGCTGGAACTGCTCAAAGTTCCTGA]


>consensus_8613#3 CCGCCCACGCGTCCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGA CCTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAG TCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTG GCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACA CGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAG GTCAGGCGGGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGA AAGGGAACGAAGAAATGTTTAACTTAAAAGGACAACTACAGCACAAAATAGAGTTCATAC GGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACA TGGCGCTGGAACTGCTCAAAGTTCCTGA



consensusID : consensus_8613#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence
                              [CCCGAGGTAACTCATCTCACTGCTGCATCGTTCGGTCGACTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAGCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGC]

[+] EMBL AL930929             [CCCGAGGTAACTCATCTCACTGCTGCATCGTTCGGTCGACTTTACTCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCATATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCTGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAAAGGGAACGAAGAAATGTTTAACTTAAAAGGACAGCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGTAAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGC]


>consensus_8613#4 CCCGAGGTAACTCATCTCACTGCTGCATCGTTCGGTCGACTTTACTCCGTACAGACAAAC CGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGCAAAAGTCCCTACCCA TATACTAACGTGGGGTAAGTGGATCGAAGAATCGCTTGGCGATCAGAAGGAAATCGTGCT GTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAAGTTTCTCTCCACCGTATA TGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCAGGCGGGCCACGATGAAGC AGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAAAGGGAACGAAGAAATGTTTAA CTTAAAAGGACAGCTACAGCACAAGATAGAGTTCATACGGAAGTACGTTCCCGAGGATGT AAAAATTCATCTAATCGGTCACTCGATAGGAGCGTACATGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8613#3      -----------------------------------------------------CCGCCCA 7
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      GATCCCCGAGGGATTCCAAAGCTCGTATGTCCACAGATAATTGCTCATGTATTGTAAACT 60
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      CGCGTCCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTAC 67
consensus_8613#4      ------------CCCGAGGTAA-CTCATCTCACTGCTGCATC-GTTCGGTCGAC-TTTAC 45
consensus_8613#0      TTTTTGCGGAGTGGCAAGACGAGCTCATCTCACTGCTGCATCCGTTCGGTCGACCTTTAC 120
consensus_8613#1      ----------------------CCGCAGGTTAT-GCTGCATC-GTTCGGTCGACCTTTAT 36
consensus_8613#2      ----------------------CCGC-GGACGC-GTGGGTCC-GTTCGGTCGACCTTTAC 35
                                             * *        *  *   * *********** **** 

consensus_8613#3      TCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGC 127
consensus_8613#4      TCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGC 105
consensus_8613#0      TCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGC 180
consensus_8613#1      TCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGC 96
consensus_8613#2      TCCGTACAGACAAACCGGCAATACGGCAAGCATCATGCAAGAGTCTTATCCAGTCATCGC 95
                      ************************************************************

consensus_8613#3      AAAAGTCCCTACCCATATACTAACGTGGGGTAAG-TGGATCGAAGAATCGCT-TGGCGAT 185
consensus_8613#4      AAAAGTCCCTACCCATATACTAACGTGGGGTAAG-TGGATCGAAGAATCGCT-TGGCGAT 163
consensus_8613#0      AAAAGTCCCTACCCATATACTAACGTGGGGTAAG-TGGATCGAAGAATCGCT-TGGCGAT 238
consensus_8613#1      AAAAGTCCCTACCCATATACTAACGTGGGGTAAGCTGGATCGAAGAATCGCTATGGCGAT 156
consensus_8613#2      AAAAGTCCCTACCCATATACTAACGTGGGGTAAG-TGGATCGAAGAATCGCT-TGGCGAT 153
                      ********************************** ***************** *******

consensus_8613#3      CAGAAGGAAATCGTGCT-GTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAA 244
consensus_8613#4      CAGAAGGAAATCGTGCT-GTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAA 222
consensus_8613#0      CAGAAGGAAATCGTGCT-GTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAA 297
consensus_8613#1      CAGAAGGAAATCGTGCTAGTGCATTACCGGTAACCCAGGACTGCCTGGTTTTTACACGAA 216
consensus_8613#2      CAGAAGGAAATCGTGCT-GTGCATTACCGGTAACCCAGGACTGCCTGGATTTTACACGAA 212
                      ***************** ****************************** ***********

consensus_8613#3      GTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCA 304
consensus_8613#4      GTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCA 282
consensus_8613#0      GTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCA 357
consensus_8613#1      GTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGC-AGTGTGGGTAATAGGTCA 275
consensus_8613#2      GTTTCTCTCCACCGTATATGAGTGCTTGAACAAAGAACTGCCAGTGTGGGTAATAGGTCA 272
                      ***************************************** ******************

consensus_8613#3      GGCG-GGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAA-A 362
consensus_8613#4      GGCG-GGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAA-A 340
consensus_8613#0      GGCG-GGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAA-A 415
consensus_8613#1      GGCGCGGCCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCGCATTGAACA 335
consensus_8613#2      GGCG-GGGCACGATGAAGCAGATGAAAGCCCGTACAAGAAACCGGTGCCCCCATTGAA-A 330
                      **** ** ****************************************** ******* *

consensus_8613#3      GGGAACGAAGAAA-TGTTTAACTTAAAAGGACAAC-TACAGCACAAAATAGAGTTCATAC 420
consensus_8613#4      GGGAACGAAGAAA-TGTTTAACTTAAAAGGACAGC-TACAGCACAAGATAGAGTTCATAC 398
consensus_8613#0      GGGAACGAAGAAA-TGTTTAACTTAAAAGGACAAC-TACAGCACAAAATAGAGTTCATAC 473
consensus_8613#1      GGGAACGAAGAAACTGTTTAACTTAAAAGGACAGCCTACAGCACAAGATAGAGTTCATAC 395
consensus_8613#2      GGGAACGAAGAAA-TGTTTAACTTAAAAGGACAAC-TACAGCACAAAATAGAGTTCATAC 388
                      ************* ******************* * ********** *************

consensus_8613#3      GGAAGTACGTTCCCGAGGATGTAAA-AATTCATCTAATCGGTCACTCGATAGGAGCGTAC 479
consensus_8613#4      GGAAGTACGTTCCCGAGGATGTAAA-AATTCATCTAATCGGTCACTCGATAGGAGCGTAC 457
consensus_8613#0      GGAAGTACGTTCCCGAGGATGTAAA-AATTCATCTAATCGGTCACTCGATAGGAGCGTAC 532
consensus_8613#1      GGAAGTACGTTCCCGAGGATGTAAACAATTCATCTAATCGGTCACTCGATAGGAGCGTAC 455
consensus_8613#2      GGAAGTACGTTCCCGAGGATGTAAA-AATTCATCTAATCGGTCACTCGATAGGAGCGTAC 447
                      ************************* **********************************

consensus_8613#3      ATGGCGCTGGAACTGCTCAA-AGTTCCTGA------------------------------ 508
consensus_8613#4      ATGGC------------------------------------------------------- 462
consensus_8613#0      ATGGCGCTGGAACTGCTCAA-AGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTT 591
consensus_8613#1      ATGGCGCTGGAACTGCTCAACAGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTT 515
consensus_8613#2      ATGGCGCTGGAACTGCTCAA-AGTTCCTGACATAAGCGACCGCATTCAACATTGCTACTT 506
                      *****                                                       

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      TCTCTTTCCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTTCATAGTGACCAGAAT 651
consensus_8613#1      TCTCTTTACCCACCCTGGAACGGATGGCCAAATCGAGGAACGGTTATCATAGTGACCAGA 575
consensus_8613#2      TCTCTTT--CCACCCTGGAACGGATGGCCAAATCGAGGAA-------------------- 544
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      CATTAATCCTATGTGGTGCGTGTGGCAATGGTTTTACCGAATGTTCGACATGCTGCCCTT 711
consensus_8613#1      ATCATTAATCCTATG--------------------------------------------- 590
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      GTTTATCCGGACTTGGATTATCTACATGTACTATCTGGTGGATGGAATACCAAAGTACTA 771
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      CCTAGGAACCGGTCTGAAGTATATGAATCCCAGCGTAATAGATAAAATATGGTTCCTGGC 831
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      AATTGATGAGATGGAAAAGGTAAAGGACCTGGATACGGATACGCTCATCAAAAACAAGCA 891
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      GCGCATTAAGCTGTATTATGGCAGTAAGGATGGATGGGTACCGGTACAGTACTACCATGA 951
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      TCTGAAGCAACGTATCCCAGATATTGATGCTGAACTGTGCACCAGGAACTATGAGCATGC 1011
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      ATTTGTATTACGTTCAGCGGCTCAGATGGGCTTTTCTGTCGGTGAGTGGATCTTAAAATA 1071
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      ------------------------------------------------------------
consensus_8613#4      ------------------------------------------------------------
consensus_8613#0      TCGTGCATAAAACTTTTTTCTTTGTTGAGAAACAATGGCCTGGCCGTGATGCTTTATAAT 1131
consensus_8613#1      ------------------------------------------------------------
consensus_8613#2      ------------------------------------------------------------
                                                                                  

consensus_8613#3      -----------------------------
consensus_8613#4      -----------------------------
consensus_8613#0      CAAATCAATCTAGATAAATAGTAACGGGT 1160
consensus_8613#1      -----------------------------
consensus_8613#2      -----------------------------
                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)