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Anopheles gambiae
cluster # 8626 cluster # 8626       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8626#0 length = 1029 sequences # 1  
consensus_8626#1 length = 939 sequences # 9  
consensus_8626#2 length = 149 sequences # 1  

consensusID : consensus_8626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1029
fasta sequence
                              [CAGAATTCGCCCCGAGGTTGACGAGGTGATAACCTGGCCACACCTTTGGCGGCATCGATTGGCTGATGTGGTTTCGATATCGTTGCTAGCCGCGATGGCCACTCTACTTTTCGAACATATCNGATACACACTTGTGGGTAACGTTCGTCATGGTTGCGGTGTATGTGTTCCTGCTGCCGTTTTGGATGCTCCTCGTTTATCGCAACAAATATACACGATCTGTGCTTTCTACTGGATGGGTTGCCAGTTCTGTACTGCTTTATATCTATTAGTTGGCCATGNGGCGTGCCTTGGTGCTAGACAAGNGCGGTTGGGCATATTTCAACTTGGATTCGTCTGTGTTCCAGCCAATTATAAAACCGGCATCGGCTGTGCAATCTGGGTGTCGGTGCAGTGCAACGCAAAATATTCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCGACGCGAAGATTTCCTGAGCTACCTTGGCTGGGCTGCTGTNTCACCGGAGTCCCCTTTACGCTAGAACCTGGCGCGCATTCTAACTCTGCAACTGGTCCCATAACCCGGTCAAAGTTGTAGGTCATATTCTGGTGGGCAGACTACATTCACATTGTCGGCGCTACAAACCATNTCGGCTNGAAGCCCTTCCGGGGTNAGGATCCTTAACCTTGGGTCACGGTCCANGCAAGAATTTCCCCAAGGAATTNAATNGTTCAAACTGGNCTTGGCTTAACCAATTTGCCNCCACACAANTTCAAANTCCAACTACCCCAATCNATCTGNACACNTGATAGGGGAAAANANTNTGGGGCACAANAAATTCCAGAAAAAATACCNCCGCTGGACATATCAACCGATACCGTGTGGCACTTAATATTCCCCCCCCAAATATAGCCCGCTGTGGAANCCTTTTGGNGGGCCAATCAGGGGGNNGCNATTGTAAACCCCCACTNGGGCATANACCCGGGGGCNNCATTCCGACAACAGTCCAAGTAATCCCCCCNATGTAACCATNNCTCGCCTTTTGTCGGNCCG]

[+] EMBL AL931432             [CAGAATTCGCCCCGAGGTTGACGAGGTGATAACCTGGCCACACCTTTGGCGGCATCGATTGGCTGATGTGGTTTCGATATCGTTGCTAGCCGCGATGGCCACTCTACTTTTCGAACATATCNGATACACACTTGTGGGTAACGTTCGTCATGGTTGCGGTGTATGTGTTCCTGCTGCCGTTTTGGATGCTCCTCGTTTATCGCAACAAATATACACGATCTGTGCTTTCTACTGGATGGGTTGCCAGTTCTGTACTGCTTTATATCTATTAGTTGGCCATGNGGCGTGCCTTGGTGCTAGACAAGNGCGGTTGGGCATATTTCAACTTGGATTCGTCTGTGTTCCAGCCAATTATAAAACCGGCATCGGCTGTGCAATCTGGGTGTCGGTGCAGTGCAACGCAAAATATTCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCGACGCGAAGATTTCCTGAGCTACCTTGGCTGGGCTGCTGTNTCACCGGAGTCCCCTTTACGCTAGAACCTGGCGCGCATTCTAACTCTGCAACTGGTCCCATAACCCGGTCAAAGTTGTAGGTCATATTCTGGTGGGCAGACTACATTCACATTGTCGGCGCTACAAACCATNTCGGCTNGAAGCCCTTCCGGGGTNAGGATCCTTAACCTTGGGTCACGGTCCANGCAAGAATTTCCCCAAGGAATTNAATNGTTCAAACTGGNCTTGGCTTAACCAATTTGCCNCCACACAANTTCAAANTCCAACTACCCCAATCNATCTGNACACNTGATAGGGGAAAANANTNTGGGGCACAANAAATTCCAGAAAAAATACCNCCGCTGGACATATCAACCGATACCGTGTGGCACTTAATATTCCCCCCCCAAATATAGCCCGCTGTGGAANCCTTTTGGNGGGCCAATCAGGGGGNNGCNATTGTAAACCCCCACTNGGGCATANACCCGGGGGCNNCATTCCGACAACAGTCCAAGTAATCCCCCCNATGTAACCATNNCTCGCCTTTTGTCGGNCCG]


>consensus_8626#0 CAGAATTCGCCCCGAGGTTGACGAGGTGATAACCTGGCCACACCTTTGGCGGCATCGATT GGCTGATGTGGTTTCGATATCGTTGCTAGCCGCGATGGCCACTCTACTTTTCGAACATAT CNGATACACACTTGTGGGTAACGTTCGTCATGGTTGCGGTGTATGTGTTCCTGCTGCCGT TTTGGATGCTCCTCGTTTATCGCAACAAATATACACGATCTGTGCTTTCTACTGGATGGG TTGCCAGTTCTGTACTGCTTTATATCTATTAGTTGGCCATGNGGCGTGCCTTGGTGCTAG ACAAGNGCGGTTGGGCATATTTCAACTTGGATTCGTCTGTGTTCCAGCCAATTATAAAAC CGGCATCGGCTGTGCAATCTGGGTGTCGGTGCAGTGCAACGCAAAATATTCCACGATGCT TCACCAGAGCAGTATTATCGGTATCATACCGCGACGCGAAGATTTCCTGAGCTACCTTGG CTGGGCTGCTGTNTCACCGGAGTCCCCTTTACGCTAGAACCTGGCGCGCATTCTAACTCT GCAACTGGTCCCATAACCCGGTCAAAGTTGTAGGTCATATTCTGGTGGGCAGACTACATT CACATTGTCGGCGCTACAAACCATNTCGGCTNGAAGCCCTTCCGGGGTNAGGATCCTTAA CCTTGGGTCACGGTCCANGCAAGAATTTCCCCAAGGAATTNAATNGTTCAAACTGGNCTT GGCTTAACCAATTTGCCNCCACACAANTTCAAANTCCAACTACCCCAATCNATCTGNACA CNTGATAGGGGAAAANANTNTGGGGCACAANAAATTCCAGAAAAAATACCNCCGCTGGAC ATATCAACCGATACCGTGTGGCACTTAATATTCCCCCCCCAAATATAGCCCGCTGTGGAA NCCTTTTGGNGGGCCAATCAGGGGGNNGCNATTGTAAACCCCCACTNGGGCATANACCCG GGGGCNNCATTCCGACAACAGTCCAAGTAATCCCCCCNATGTAACCATNNCTCGCCTTTT GTCGGNCCG



consensusID : consensus_8626#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 939
fasta sequence
                              [CTGTTGGCCT-----ATACACGATCTGTGCTTTCTACTGGATGGGTGCCAGTTCTGTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGA-TATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC-GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCATTAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGTATGCATTAAAAAAAATGGACAAATTTCAAACAACGCTGAACAGAAACAACAACAACAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCCGGGTT]

[-] EMBL CNS09RKT             [CTGTTGGCCT     ATACACGATCTGTGCTTTCTACTGGATGGGTGCCAGTTCTTTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTA CCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGATTATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGTTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCAGGAGCTGACCACCATTAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGTATACATTAAAAAAAATGGACAAA TTCAAACAACGC                                                               ]
[-] EMBL CNS09HKM             [CTGTTGGCCTACTGGATACACGATCTGTGCTTTCTACTGGATGGGTGCCAGTTCTGTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTAACCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGA TATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCATTAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGTATGCATTAAAAAAAAT                                                                                   ]
[+] EMBL CNS09G2S             [                          gaGCTTTCTACTGGATGGGTGCCAGTTCTGTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGATTATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCATTAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGC                                                                                                                                          ]
[+] EMBL BM597373             [                              ccgCTACTGGATGGGTGCCAGTTCTGTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGATTATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGA                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09RKS             [                                    CTGGATGGGTGCCAGTTCTGTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTAAATGTTTGTCAGCACACTCCAGATTATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCAGGAGCTGACCACCATTAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGTATACATTAAAAAAAATGGACAAATTTCAAACAACGCTGAACAGAAACAACAACAACAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCCGGGTT]
[+] EMBL CNS09HKL             [                                                      TGTCTGCTTTATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGA TATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCATTAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGTATGCATTAAAAAAAATGGACAAATTTCAAACAACGCTGAACAGAAACAACAACAAC AAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCC     ]
[+] EMBL CNS09KHQ             [                                                                ATTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGA TATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09EQS             [                                                                                                        GTTGGCATATTCAATGGATTCGTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGCAAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGCATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATTCACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGA TATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCCTGTACGGTGAGA                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS09EQT             [                                                                                                                                                                                                                                                                                                                                                   TGTTCATATTTGTGGCAGACTAAATTCACTTGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACACTCCAGA TATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCTCGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCC GTACGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCATTAGCGGCGGTTCACCGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGTATGCATTAAAAAAAATGGACA                                                                              ]


>consensus_8626#1 CTGTTGGCCTATACACGATCTGTGCTTTCTACTGGATGGGTGCCAGTTCTGTCTGCTTTA TTTATTAGTGGCATGGGCGGCCTGGTGCTAGACAAGGCGGTTGGCATATTCAATGGATTC GTTGTGTTCCAGCCAATTATAAACGGCATCGGCGGCAATCTGGTGTCGGTGCAGGCAAGC AAAATATCCACGATGCTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAG ATTTTTGAGCTACCCTGGCGGGCGCTGTTTCACGGAGTCCCTTACGCTAGAACTGCGCGC ATTCTAATCGCAATGTCCATACCCGGTCAAGTGTTGTTCATATTTGTGGCAGACTACATT CACATGTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCAGCACA CTCCAGATATGTTACTGCTGTACATTGCGCACATTATTATTCATTTGATGTGGAAATGGA AAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTGTTCGGCT CGAGCTTCCTGATGCTGGCGTTCCTATTCCTGCGATCGATAGGCCACCCGTACGGTGAGA AGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCATTAGCGGCG GTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCATAGCATCGC CGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGTATATGCTA GTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACATGTAACGT ATGCATTAAAAAAAATGGACAAATTTCAAACAACGCTGAACAGAAACAACAACAACAAAA AAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCCGGGTT



consensusID : consensus_8626#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 149
fasta sequence
                              [CCATTTTTTTTAATGCATACGATTACAAGTAATAGGTAATAAAGATCTCATATTTTTAAGCATACGTTTCAAGTTATAACTAGCATATACCATTTTCTAGACCGTGTTAAGGTGCTCATAGCCAAGAGCGAAAAAGCCCCCCCATCCTA]

[+] EMBL CNS09G2T             [CCATTTTTTTTAATGCATACGATTACAAGTAATAGGTAATAAAGATCTCATATTTTTAAGCATACGTTTCAAGTTATAACTAGCATATACCATTTTCTAGACCGTGTTAAGGTGCTCATAGCCAAGAGCGAAAAAGCCCCCCCATCCTA]


>consensus_8626#2 CCATTTTTTTTAATGCATACGATTACAAGTAATAGGTAATAAAGATCTCATATTTTTAAG CATACGTTTCAAGTTATAACTAGCATATACCATTTTCTAGACCGTGTTAAGGTGCTCATA GCCAAGAGCGAAAAAGCCCCCCCATCCTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8626#0      CAGAATTCGCCCCGAGGTTGACGAGGTGATAACCTGGCCACACCTTTGGCGGCATCGATT 60
consensus_8626#1      ------------------------------------------------------------
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      GGCTGATGTGGTTTCGATATCGTTGCTAGCCGCGATGGCCACTCTACTTTTCGAACATAT 120
consensus_8626#1      ------------------------------------------------------------
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      CNGATACACACTTGTGGGTAACGTTCGTCATGGTTGCGGTGTATGTGTTCCTGCTGCCGT 180
consensus_8626#1      ------------------------------------------------------------
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      TTTGGATGCTCCTCGTTTATCGCAACAAATATACACGATCTGTGCTTTCTACTGGATGGG 240
consensus_8626#1      ----------------CTGTTG----GCCTATACACGATCTGTGCTTTCTACTGGATGGG 40
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      TTGCCAGTTCTGTACTGCTTTATATCTATTAGTTGGCCATGNGGCGTGCCTTGGTGCTAG 300
consensus_8626#1      T-GCCAGTTCTGT-CTGCTTTAT--TTATTAGTGG--CATGG---GCGGCCTGGTGCTAG 91
consensus_8626#2      -------------------CCATTTTTTTTAATG---CATAC---GATTACAAGTAATAG 35
                                           **   * *** *    ***     *       **  ***

consensus_8626#0      ACAAGNGCGGTTGGGCATATTTCAACTTGGATTCGTCT-GTGTTCCAGCCAATTATAAAA 359
consensus_8626#1      ACAAGG-CGGTTGG-CATATTCAA---TGGATTCGT-T-GTGTTCCAGCCAATTATAAA- 143
consensus_8626#2      GTAATAAAGATCTCATATTTTTAA----GCATACGTTTCAAGTTATAACTAGC-ATATA- 89
                        **    * *     ** **  *    * ** *** *   ***  * * *   *** * 

consensus_8626#0      CCGGCATCGGCTGTGCAATCTGGGTGTCGGTGCAGTGCAACGCAAAATA-TTCCACGATG 418
consensus_8626#1      -CGGCATCGGCG--GCAATCTGG-TGTCGGTGCAG-GCAA-GCAAAATA-T-CCACGATG 195
consensus_8626#2      ---CCATTTTCTAGACCGTGTTAAGGTGCTCATAGCCAAGAGCGAAAAAGCCCCCCCATC 146
                          ***   *    *  * *    **      **   *  ** *** *   ** * ** 

consensus_8626#0      CTTCACCAGAGCAGTATTATCGGTATCATACCGCG--ACGCGAAGATTTCCTGAGCTACC 476
consensus_8626#1      CTTCACCAGAGCAGTATTATCGGTATCATACCGCCGCACGCGAAGATTTT-TGAGCTACC 254
consensus_8626#2      CTA--------------------------------------------------------- 149
                      **                                                          

consensus_8626#0      TTGGCTGGGCTGCTGTNTCACCGGAGTCCCCTTTACGCTAGAACCTGGCGCGCATTCTAA 536
consensus_8626#1      CTGGC--GGGCGCTGTTTCAC-GGAGTCCC--TTACGCTAGAACT--GCGCGCATTCTAA 307
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      CTCTGCAACTGGTCCCATAACCCGGTCAAAGTTGTAGGTCATATTCTGGTGGGCAGACTA 596
consensus_8626#1      TC--GCAATG---TCCATA-CCCGGTCAAG--TGTTGTTCATATTT--GTGG-CAGACTA 356
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      CATTCACATTGTCGGCGCTACAAACCATNTCGGCTNGAAGCCCTTCCGGGGTNAGGATCC 656
consensus_8626#1      CATTCACAT-GTCGCGCTCAACCATCGGTGCGCCCTTCGTGTTGTCTTACTTGTTTGTCA 415
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      TTAACCTTGGGTCACGGTCCANGCAAGAATTTCCCCAAGGAATTNAATNGTTCAAACTGG 716
consensus_8626#1      GCACACTCCAGATATGTTACTGCTGTACATTGCGCACATTA--TTATTCATTTGATGTGG 473
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      NCTTGGCTTAACCAATTTGCCNCCACACAANTTCAAANTCCAACTACCCCAATCNATCTG 776
consensus_8626#1      AAATGGAAAATCGATCCCGATAACTCGGCTATCCCATACCTGACTGCGCTGGGTGACCTG 533
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      NACACNTGATAGGGGAAAANANTNTGGGGCACAANAAATTCCA--GAAAAAATACCNCCG 834
consensus_8626#1      TTCGGCTCGAGCTTCCTGATGCTG-GCGTTCCTATTCCTGCGATCGATAGGCCACCCGTA 592
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      CTG-GACATATCAACCGATACCGTGTGGCACTTAATATTCCCCCCCCAAATATAGCCCGC 893
consensus_8626#1      CGGTGAGAAGTCGAGCGAAACAGTGGACGGATTCAAACTACTGCCGGAGCTGACCACCAT 652
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      T-GTGGAANCCTTTTGGNGGGCCAATCAGGGGGNNGCNATTGTAAACC----CCCACTNG 948
consensus_8626#1      TAGCGGCGGTTCACTGATGGATCAAATACAAGATGACAAAGGTATATGAGAGCTGATCAT 712
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      GGCATANACCCGGGGGCNNCATTCCGACAACAGTCCAAGTAATCCCCCCNATGTAACCAT 1008
consensus_8626#1      AGCATCGCCGCCCTGTTTCGCTCTTGGCTATGAGCACCTTAACACGGTCTAGAAAATGGT 772
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      NN---CTCGCCTTTTGTCGGNCCG------------------------------------ 1029
consensus_8626#1      ATATGCTAGTTATAACTTGAAACGTATGCTTAAAAATATGAGATCTTTATTACCATAACA 832
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      ------------------------------------------------------------
consensus_8626#1      TGTAACGTATGCATTAAAAAAAATGGACAAATTTCAAACAACGCTGAACAGAAACAACAA 892
consensus_8626#2      ------------------------------------------------------------
                                                                                  

consensus_8626#0      -----------------------------------------------
consensus_8626#1      CAACAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCCGGGTT 939
consensus_8626#2      -----------------------------------------------
                                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)