These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1415 fasta sequence [CTTTCGGTCGTCCACACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATC-AATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACC-AACCCTGGCGTGAGCTATCGCCCCCAACCGGT-AGAAGCGGAAGGCATCAATAGCATCCAGTA-CGTGGCGGCCAACAAATC-GGACG-TTGCGGTGTGGGTCAACATGCTC-AACGATTTTCTGGCACCGTACGCGGATCATACATT-GCT-GCCCGGAGGTGGC-AAG-AATCAGGTGATCTGTGACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCC-TCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGATCTGGCGTCTCACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGTGTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTTT-CCAGCGTACTACTACCCATACATGAACATCGACGGCTATCTGAGCCCACTCGTCGCCGTACATCTTGCCCGACCGAAGCCGAAAACGACCATCAGCATCGAGTGCCGTGCCTGGGCGAAAAACATTATCTACCGCGGAGGTAGTCGCGATCGGGCCGGGTCGGTACAGCTATTCCTGCGTATTGATTAGATAGCGCTGCGGCTGATTCCCACCGACCAATGTGACAATGTCGAATTGTTGTTTCATTTTTTTAACGTGTTACGTTGATCCGTTTTGCTGAACGCAGCGACACAAGGGGACGAGAATTCATTAGAAACAAATTACATCGCAGCCAGACGCCCGCCCGATCATCCTTCCACAACGCACGTGTGCTATGAAGAGTTTACTTAAACGTTTTAGTGAAGTGAGAAAAATCAATAAATGTATGTTTGTTTGGAAAAAAAAAAAA] [+] EMBL CNS08XAM [CTTTCGGTCGTCCACACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATC AATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACC AACCCTGGCGTGAGCTATCGCCCCCAACCGGT AGAAGCGGAAGGCATCAATAGCATCCAGTA CGTGGCGGCCAACAAATC GGACG TTGCGGTGTGGGTCAACATGCTC AACGATTTTCTGGCACCGTACGCGGATCATACATT GCT GCCCGGAGGTGGC AAG AATCAGGTGATCTGTGACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCC TCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGATCTGGCGTCTCACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGTGTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTTT CCAGC ] [+] EMBL BM615032 [ CCGCACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATCAAATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACCAAACCCTGGCGTGAGCTATCGCCCCCAACCGGTAAGAAGCGGAAGGCATCAATAGCATCCAGTAGTGTGGCGGCCAACAAATCGGGACGTTTGCGGTGTGGGTCAACATGCTCAAACGATTTTCTGGCACCGTACGCGGATCATACATTGGCTGGCCCGGAGGTGGCAAAGAAATCAG ] [+] EMBL CNS095CR [ GTA ACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATC AATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACC AACCCTGGCGTGAGCTATCGCCCCCAACCGGT AGAAGCGGAAGGCATCAATAGCATCCAGTA TGTGGCGGCCAACAAATC GGACG TTGCGGTGTGGGTCAACATGCTC AACGATTTTCTGGCACCGTACGCGGATCATACATT GCT GCCCGGAGGTGGC AAG AATCAGGTGATCTGTGACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCCTTCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGATCTGGCGTCTCAAATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAAGTGTGGGTGACGTGCAAAGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTT ] [-] EMBL CNS08XAN [ TGGATGAGTCGCGCATCGGTACC AACCCTGGCGTGAG TATCGCCCCCAACCGGT AGAAGCGGAAGGCATCAATAGCATCCAGTA CGTGGCGGCCAACAAATC GGACG TTGCGGTGTGGGTCAACATGCTC AACGATTTTCTGGCACCGTACGCGGATCATACATT GCT GCCCGGAGGTGGC AAG AATCAGGTGATCTGTGACTTCAAAACTCCACCAACGGCCGGCAACGTGTGTGCC TCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGTTCTGGCGTCTAACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGTGTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTTTCCCAGCGTACTACTACCCATACATGAACATCGACGGCTATCTGAGCCCACTCGTCGCCGTACATCTTGCCCGACCGAAGCCGAAAACGACCATCAGCATCGAGTGCCGTGCCTGGGCGAAAAACATTATCTACCGCGGAGGTAGTCGCGATCGGGCCGGGTCGGTACAGCTATTCCTGCGTATTGATTAGATAGCGCTGCGGCTGATTCCCACCGACCAATGTGACAATGTCGAATTGTTGTTTCATTTTTTTAACGTGTTACGTTGATCCGTTTTGCTGAACGCAGCGACACAAGGGGACGAGAATTCATTAGAAACAAATTACATCGCAGCCAGACGCCCGCCCGATCATCCTTCCACAACGCACGTGTGCTATGAAGAGTTTACTTAAACGTTTTAGTGAAGTGAGAAAAATCAATAAATGTATGTTTGTTTGGAAAAAAAAAAAA] consensusID : consensus_8653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1003 fasta sequence [ATGGGTCGAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCG-CCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG-CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA-GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAAGTCGGTCGCCAAGCGCAG-CGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACCGAAGCGGCGATGAAGAAGATCGAGGACAACAACACGCTCGTCTTCCTGATTCACCTGCGCGCCAACAAGAACCACGTGAAGGCCGCCGTGAGGAAGCTGTACGACGTGAAGGTGCTGAAGAT] [+] EMBL CNS09NFI [ATGGGTCGAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCG CCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCCGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAAGTCGGTCGCCAAGCGCAG CGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACCGAAGCGGCGATGAAGAAGATCGAGGACAACAACACGCTCGTCTTCCTGATTCACCTGCGCGCCAACAAGAACCACGTGAAGGCCGCCGTGAGGAAGCTGTACGACGTGAAGGTGCTGAAGAT] [+] EMBL CNS09G97 [ AAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCGTCCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGG CAAGAAGGATGCCAAGAATGGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGT ] [+] EMBL CNS09I67 [ AGAAGAAGCCGGCAGCCGCCG CCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCC ] [+] EMBL CNS099O6 [ GGTGAGAAGAAA CCGCAGCGGAAAAGAAGCCCCGCGGC GGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAAGTCGGTCGCCAAGCGCAGCCGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACCGAAGCGGCGATGAA ] consensusID : consensus_8653#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence [CGAAGGTTGTATTTCTTTTCTCTTTCTCTCTCCGCGTTCCTCGCTGCTTCAAACACACTCCTATACTTGTTGGAAAATTAGATTGTAGTCAAACCACACCGTACCATCCAGCACTTGGTTGGTGGGCTGACATTTTTCACGACCACCCCCTCAACACCGGACAAGCATCGGCGCAGATATTTAAACGGACGCCTGTACTGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGGAAGCGGCACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCATCACCGTGCAATTCCATCAGACTGGACAGATCGAATCGCGGCTTCTTCACGCTTGATGATGGCCGTCATCTTCGCGCGAATGTTCTTGATCTGCGAGTGCTGGGCGTAGAGGTCTTGCGCTGCGACATCGAGTCCTTGATGGTGAAGCCGATGCAGAACACGCGCAGATGAAGCCATCGGTGGTCTTGACGTCGACCGAGCACTCGATCAGGGTTTGCCATTTCTTGACCATGGATCGCAGCTTGTCGGTCGTCAACGCCATACCGTGGAAGTAGGTAAGGACATCACGGACGT] [+] EMBL CNS08DFA [CGAAGGTTGTATTTCTTTTCTCTTTCTCTCTCCGCGTTCCTCGCTGCTTCAAACACACTCCTATACTTGTTGGAAAATTAGATTGTAGTCAAACCACACCGTACCATCCAGCACTTGGTTGGTGGGCTGACATTTTTCACGACCACCCCCTCAACACCGGACAAGCATCGGCGCAGATATTTAAACGGACGCCTGTACTGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGGAAGCGGCACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCATCACCGTGCAATTCCATCAGACTGGACAGATCGAATCGCGGCTTCTTCACGCTTGATGATGGCCGTCATCTTCGCGCGAATGTTCTTGATCTGCGAGTGCTGGGCGTAGAGGTCTTGCGCTGCGACATCGAGTCCTTGATGGTGAAGCCGATGCAGAACACGCGCAGATGAAGCCATCGGTGGTCTTGACGTCGACCGAGCACTCGATCAGGGTTTGCCATTTCTTGACCATGGATCGCAGCTTGTCGGTCGTCAACGCCATACCGTGGAAGTAGGTAAGGACATCACGGACGT] consensusID : consensus_8653#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence [GTACCATGGCGGTCGGCAAAAATAAGGGTGTCTCGAAAGGAGGCAAGAAAGGTTCGAAAAAGAAGGTCGTGGATCCGTTCACGCGCAAGGATTGGTACGATGTGGAGGCCTCGAACGAGCCCGATGCGGAGAGATCTTTCCGCAAGTTCAAGCTGGTGGCGGAGAGCGTGAACGGCCGTGATGTCCTTACCAACTTCCACGGTATGGCGTTGACGACCGACAAGCTGCGATCCATGGTCAAGAAATGGCAAACCCTGATCGAGTGCTCGGTCGACGTCAAGACCACCGATGGCTTCATGCTGCGCGTGTTCTGCATCGGCTTCACCATCAAGGACTCGATGTCGCAGCGCAAGACCTGCTACGCCCAGCACTCGCAGATCAAGAACATTCGCGCGAAGATGACGGCCATCATCAAGCGTGAAATCACCAGCAC] [+] EMBL CNS09BQO [GTACCATGGCGGTCGGCAAAAATAAGGGTGTCTCGAAAGGAGGCAAGAAAGGTTCGAAAAAGAAGGTCGTGGATCCGTTCACGCGCAAGGATTGGTACGATGTGGAGGCCTCGAACGAGCCCGATGCGGAGAGATCTTTCCGCAAGTTCAAGCTGGTGGCGGAGAGCGTGAACGGCCGTGATGTCCTTACCAACTTCCACGGTATGGCGTTGACGACCGACAAGCTGCGATCCATGGTCAAGAAATGGCAAACCCTGATCGAGTGCTCGGTCGACGTCAAGACCACCGATGGCTTCATGCTGCGCGTGTTCTGCATCGGCTTCACCATCAAGGACTCGATGTCGCAGCGCAAGACCTGCTACGCCCAGCACTCGCAGATCAAGAACATTCGCGCGAAGATGACGGCCATCATCAAGCGTGAAATCACCAGCAC] consensusID : consensus_8653#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence [TTTTGAGCCAAGAAACGCAGAGACGGCTCAATGATACCACCACGGAGTCGCAGCACCAGAAGAAGGGTCGATTCCTTCTGAATGTTGTTGTTGGAGAGAGTTCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGAACTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTTCGAAGCTCGACCTCAAGTTTTAGGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTTTCCAACGTGTCTTTTCGCTGGTACACTTTGACAGGAAAAAAGCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCT] [+] EMBL CNS08LHF [TTTTGAGCCAAGAAACGCAGAGACGGCTCAATGATACCACCACGGAGTCGCAGCACCAGAAGAAGGGTCGATTCCTTCTGAATGTTGTTGTTGGAGAGAGTTCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGAACTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTTCGAAGCTCGACCTCAAGTTTTAGGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTTTCCAACGTGTCTTTTCGCTGGTACACTTTGACAGGAAAAAAGCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 CTTTCGGTCGTCCACACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCAC 60 consensus_8653#1 ------------------------------------------------------------ consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 GACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAA 120 consensus_8653#1 ---------------ATGGGTCGAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGA 45 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 CCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTT 180 consensus_8653#1 AAAGAAAGAGAAGAAGCCGGCAGCCGCCGCCGCTGCTACGGCTTCCGGATCTGGTGAGAA 105 consensus_8653#2 -----------------------------------------------CGAAGGTTGTATT 13 consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 ACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACG 240 consensus_8653#1 GAAACCCGCAGCGGAAAAGAAGCCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGC 165 consensus_8653#2 TCTTTTCTCTTTCTCTCTCCGCGTTCCTCGCTGCTT--CAAACACACTCCTATACTTGTT 71 consensus_8653#3 ----------------------GTACCATGGCGGTCGGCAAAAATAAGGGTGT-CTCGAA 37 consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 TACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAA-CTCGCA 299 consensus_8653#1 CAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCG--CTCCGA 223 consensus_8653#2 GGAAAATTAGATTGTAGTCAAACCACACCGTACCATCCAGCACTTGGTTGGTGGGCTGAC 131 consensus_8653#3 AGGAGGCAAGAAAG-GTTCGAAAAAGAAGGT------CGTGGATCCGTTCACGCGCAAGG 90 consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 GGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGC 359 consensus_8653#1 AGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGG 283 consensus_8653#2 ATTTTTC-ACGACCACCCCCTCAACACCGGACAAGCATCG-GC-GCAGATATTTAAACGG 188 consensus_8653#3 ATTGGT--ACGAT----GTGGAGGCCTCGAACGAGCCCGATGC-GGAGAGATCTTTCCGC 143 consensus_8653#4 ------------------------TTTTGAGC---CAAGAAAC-GCAGAGACGGCTCAAT 32 consensus_8653#0 CTGCTTC-TACACCGTTCTGGCGGCACTGTTCGCCATCTGTAT-GCAGGGGCTGCTGGTC 417 consensus_8653#1 CCAAGAAGGATGCCAAGAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCA 343 * * * * consensus_8653#2 ACGCCTGTACTGGTGGTTCGTAGCCTTCCGG-ACGGTCGACGACGACACCGGAAGCGGCA 247 consensus_8653#3 AAGTTCAAGCTGGTGGCGGAGAGCGT---GA-ACGGCCG-TGATGTCCTTACCAACTTCC 198 consensus_8653#4 GATACCACCACGGAGTCGCAGCACCAGAAGA-AGGGTCG--ATTCCTTCTGAATGTTGTT 89 consensus_8653#0 ACG-CTGAACCATCAATACCCGAAGTGGCAG-CTGGATGAGTCGCGCATCGGTACCAACC 475 consensus_8653#1 AGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGA 403 * * consensus_8653#2 --CCGGTCGACACTTCAGCAGCC-TTGCCGCCGC---------CATC-ACCGTGCAATTC 294 consensus_8653#3 --ACGGTATG-GCGTTGACGACC-GACAAGCTGC---------GATCCATGGTCAAGAAA 245 consensus_8653#4 --GTTGGAGAGAGTTCGACCATC-CTCCAGCTGC---------TTGC--CGGCGAAGATC 135 consensus_8653#0 --CTGGCGTGAGCTATCGCCCCC-AACCGGTAGAAGCGGAAGGCATCAATAGCATCCAGT 532 consensus_8653#1 AGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCA 463 * * * * consensus_8653#2 CATCAG-ACTGGACAGATCGAAT--CGCGGCTT-CTTCACGCTTGATGATGGCCGTCATC 350 consensus_8653#3 TGGCAA-ACC---CTGATCGAGTG-CTCGGTCGACGTCAAGACCACCGATGGCTTCATGC 300 consensus_8653#4 AAACGCTGCTGAACTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCG 195 consensus_8653#0 ACGTGGCGGCCAACAAATCGGACGTTGCGGTGTGGGTCAACATGCTCAACGATTTTCTGG 592 consensus_8653#1 AGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGG 523 consensus_8653#2 TTCGCGCGA-----ATGTTCTTGATCTGCGAGTGCTGGGCGTAGAGGT-CTTGCGCTGCG 404 consensus_8653#3 TGCGCGTGTTCTGCATCGGCTTCACCATCAAGGACTCGATGTCGCAGCGCAAGACCTGCT 360 consensus_8653#4 ATCGTGTTCGAAGCTCGACCTCAAGTTTTAGGGTCTTGCCGGTG-AGCGTTTTCACGAAA 254 consensus_8653#0 CAC-CGTACGCGGATCATACATTGCTGCCCGGAGGTGGC--AAGAATCAGGTGATCTGTG 649 consensus_8653#1 CTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATG 583 * * * * * * consensus_8653#2 ACATCGAGTCCTTGATGGTGAAGCCGATGCAGAACACGCGCAGATGA-AGCCATCGGTGG 463 consensus_8653#3 ACGCCCAGCACTCGCAGATCAAGAACATTC-----GCGCGAAGATGACGGCCATCATCAA 415 consensus_8653#4 ATCTGCATGTTTCCAACGTGTCTTTTCGCTGGTACACTTTGACAGGAAAAAAGCCAGTTG 314 consensus_8653#0 ACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCCTCGATGTGAAGAACCTTGGCCC 709 consensus_8653#1 CCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGA-AG 642 * consensus_8653#2 TCTTGACGTCGACCGAGCACTCGATCAGGGTTTGCCATTTCTTGACCATGGATCGCAGCT 523 consensus_8653#3 GCGTGAAATCACC--AGCAC---------------------------------------- 433 consensus_8653#4 GCCAACAGTTCTCGAGGAATTCCGCAGCCT------------------------------ 344 consensus_8653#0 GTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCT 769 consensus_8653#1 GCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCC-AAGCG 701 * * consensus_8653#2 TGTCGGTCGTCAACGCCATACCGTGGAAGTAGGTAAGGACATCACGGACGT--------- 574 consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 CAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGA 829 consensus_8653#1 TGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTC 761 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 CATGCCCGACGATCTGGCGTCTCACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGT 889 consensus_8653#1 CGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAA 821 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 GTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATA 949 consensus_8653#1 GTCGGTCGCCAAGCGCAGCGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACC 881 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 CCTGCCGAGCCAAGGTTTCCAGCGTACTACTACCCATACATGAACATCGACGGCTATCTG 1009 consensus_8653#1 GAAGCGGCGATGAAGAAGATCGAGGACAACAACACGCTCGTCTTCCTGATTCACCTGCGC 941 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 AGCCCACTCGTCGCCGTACATCTTGCCCGACCGAAGCCGAAAACGACCATCAGCATCGAG 1069 consensus_8653#1 GCCAACAAGAACCACGTGAAGGCCGCCGTGAGGAAGCTGTACGACGTGAAGGTGCTGAAG 1001 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 TGCCGTGCCTGGGCGAAAAACATTATCTACCGCGGAGGTAGTCGCGATCGGGCCGGGTCG 1129 consensus_8653#1 AT---------------------------------------------------------- 1003 consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 GTACAGCTATTCCTGCGTATTGATTAGATAGCGCTGCGGCTGATTCCCACCGACCAATGT 1189 consensus_8653#1 ------------------------------------------------------------ consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 GACAATGTCGAATTGTTGTTTCATTTTTTTAACGTGTTACGTTGATCCGTTTTGCTGAAC 1249 consensus_8653#1 ------------------------------------------------------------ consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 GCAGCGACACAAGGGGACGAGAATTCATTAGAAACAAATTACATCGCAGCCAGACGCCCG 1309 consensus_8653#1 ------------------------------------------------------------ consensus_8653#2 ------------------------------------------------------------ consensus_8653#3 ------------------------------------------------------------ consensus_8653#4 ------------------------------------------------------------ consensus_8653#0 CCCGATCATCCTTCCACAACGCACGTGTGCTATGAAGAGTTTACTTAAACGTTTTAGTGA 1369 consensus_8653#1 ------------------------------------------------------------ consensus_8653#2 ---------------------------------------------- consensus_8653#3 ---------------------------------------------- consensus_8653#4 ---------------------------------------------- consensus_8653#0 AGTGAGAAAAATCAATAAATGTATGTTTGTTTGGAAAAAAAAAAAA 1415 consensus_8653#1 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||