These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_866#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence [CCGGTCGGAGAAGCGAAAAACGCATCGTAAGAAAATCCCGTTCCCAATCGATTCCCCCCTTTCGACCAAGCAAAGGAGAGCACACTGGCTGCGGGCGAGCGATCGAGCGAGCGGGTGTGGTGCTGCATTGTTACGACAGTTGAGTTCGGTGCATAGAACCTGGACCCGGGAGGACGACGGAACACCACCAACCTGCTTACTGGGGCTGCATCGAAGTAGGTGCAGTGAAAAGTGATTTCTTGGTCCACACAACAGACACATACACACATACACAGACAGACACTGCAACGCGGTGTGCTGCGAGGGGCCAGGAGCGGACTGGTACGGGGGCCGGAGGAAAGACGGCGGCCACAAGACGTTTCGGGAAGAAGGTGCCCGATTGAAGTAGTAGTAGGCTGCGCGAAAACATCACCATTGTATATGTGTGTATGTGTGTGTGTGCGTGTGGAGACGAGCAAAGTGTGTGCTGGGAAGTGGAATCCTTCGCACCAGTCGTGGTTTAGATTACTTTTCCTTTTTTGAGTTTGAATGGTGCCCGCGATAGAAACTCAAAATTGATTGCCTTCGGAAACCGATTGGCGGCGGCTCTTCGGCAAGGTCCTGCTCGTCCTCGTCGTCGGACGAAGACCTCAATGAACGACCACCACCACCGTC] [+] EMBL BM616390 [CCGGTCGGAGAAGCGAAAAACGCATCGTAAGAAAATCCCGTTCCCAATCGATTCCCCCCTTTCGACCAAGCAAAGGAGAGCACACTGGCTGCGGGCGAGCGATCGAGCGAGCGGGTGTGGTGCTGCATTGTTACGACAGTTGAGTTCGGTGCATAGAACCTGGACCCGGGAGGACGACGGAACACCACCAACCTGCTTACTGGGGCTGCATCGAAGTAGGTGCAGTGAAAAGTGATTTCTTGGTCCACACAACAGACACATACACACATACACAGACAGACACTGCAACGCGGTGTGCTGCGAGGGGCCAGGAGCGGACTGGTACGGGGGCCGGAGGAAAGACGGCGGCCACAAGACGTTTCGGGAAGAAGGTGCCCGATTGAAGTAGTAGTAGGCTGCGCGAAAACATCACCATTGTATATGTGTGTATGTGTGTGTGTGCGTGTGGAGACGAGCAAAGTGTGTGCTGGGAAGTGGAATCCTTCGCACCAGTCGTGGTTTAGATTACTTTTCCTTTTTTGAGTTTGAATGGTGCCCGCGATAGAAACTCAAAATTGATTGCCTTCGGAAACCGATTGGCGGCGGCTCTTCGGCAAGGTCCTGCTCGTCCTCGTCGTCGGACGAAGACCTCAATGAACGACCACCACCACCGTC] consensusID : consensus_866#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 558 fasta sequence [CCGGCAATCACAGAACACCCTCCAACAGAACAGAAAAGCAATTAGCGCAGCTCAAAGCAATAGAAATTGCATATGGCAGCAGCACCAGCATACACTGTGCGGAAGTAATGTTGTTTTGGAAGTTTTCCATTGCCGAAGCCCCGTAGCCAAAAGCAGTGTAGGCGTGCAGCAAAGTAGTGTAGCAAAAAAAAAAGCAGTGCCCACCCATGCCAACACCACCATCCCGAAAAGGGGGCCAATCGGTATCGAAATCGTGCAAAAATTACCCCCCCTTGCCCTCGCCTCCTCCTCAATCGCATCGTACACCACACACCAACACAGGCACAGTGGTGGTGGTGCTGCTGCTGCACCAGCCAGCCGTGACGATGCTTGTTGGGGCAATATAAATGGATGCACTTTTTTCGTGACAACAGCTGCATTGTTACGACAGTTGAGTTCGGTGCATAGAACCTGGACCCGGGAGGACGACGGAACACCACCAACCTGCTTACTGGGGCTGCATCGAAGTAGGTGCAGTGAAAAGTGATTTCTTGGTCCACACAACAGACACATACACAC] [+] EMBL BM653443 [CCGGCAATCACAGAACACCCTCCAACAGAACAGAAAAGCAATTAGCGCAGCTCAAAGCAATAGAAATTGCATATGGCAGCAGCACCAGCATACACTGTGCGGAAGTAATGTTGTTTTGGAAGTTTTCCATTGCCGAAGCCCCGTAGCCAAAAGCAGTGTAGGCGTGCAGCAAAGTAGTGTAGCAAAAAAAAAAGCAGTGCCCACCCATGCCAACACCACCATCCCGAAAAGGGGGCCAATCGGTATCGAAATCGTGCAAAAATTACCCCCCCTTGCCCTCGCCTCCTCCTCAATCGCATCGTACACCACACACCAACACAGGCACAGTGGTGGTGGTGCTGCTGCTGCACCAGCCAGCCGTGACGATGCTTGTTGGGGCAATATAAATGGATGCACTTTTTTCGTGACAACAGCTGCATTGTTACGACAGTTGAGTTCGGTGCATAGAACCTGGACCCGGGAGGACGACGGAACACCACCAACCTGCTTACTGGGGCTGCATCGAAGTAGGTGCAGTGAAAAGTGATTTCTTGGTCCACACAACAGACACATACACAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_866#0 CCGGTCGGAGAAGCGAAAAACGCATCGTAAGAAAATCCCGTTCCCAATCGATTCCCCCCT 60 consensus_866#1 ----------------------------------------CCGGCAATCACAGAACACCC 20 ***** * ** consensus_866#0 TTCGACCAAGCAAAGGAGAGCACACTGGCTGCGGGCGAGCGATCGAGCGAGCGGGTGTGG 120 consensus_866#1 TCCAAC--AGAACAGAAAAGCA-ATTAGC-GCAGCTCAAAGCAATAGAAATTGCATATGG 76 * * ** ** * ** * **** * * ** ** * * * ** * * * *** consensus_866#0 T-GCTGCATTGTTACGACAGTTGAGTTCGGTGCATAGAACCTGGACCCGGGAGGACGACG 179 consensus_866#1 CAGCAGCACCAGCAT-ACACT---GTGCGG---AAGTAATGTTGTTTTGGAAGTTTTCCA 129 ** *** * *** * ** *** * ** * * ** ** * consensus_866#0 GAACACCACCAACCTGCTTACTGGGGCTGCATCGAAGTAGGTGCAGTGAAAAGTGATTTC 239 consensus_866#1 TTGC----CGAAGCCCCGTA----GCCAAAAGCAGTGTAGGCGTGCAGCAAAGTAGT--- 178 * * ** * * ** * * * * ***** * * ***** * consensus_866#0 TTGGTCCACACAACAGACACATACACACATACACAGACAGACACTGCAACGCGGTGTGCT 299 consensus_866#1 GTAGCAAAAAAAAAAGCAGTGCCCACCCATGCCAACACCACCATCCCGAAAAGG-GGGCC 237 * * * * ** ** *** *** * * ** ** * * ** * ** consensus_866#0 GCGAGGGGCCAGGAGCGGACTGGTACGGGGGCCGGAGGAAAGACGGCGGCCACAAGACGT 359 consensus_866#1 AATCGGTATCGAAATCGTGCAAAAATTACCCCCCCTTGCCCTCGCCTCCTCCTCAATCGC 297 ** * * ** * * ** * * * ** consensus_866#0 TTCGGGAAGAAGGTGCCCG-ATTGAAGTAGTAGTAGGCTGCGCGAAAACATCACCATTGT 418 consensus_866#1 ATCGTACACCACACACCAACACAGGCACAGTGGT-GGTGGTGCTGCTGCTGCACCAGC-C 355 *** * * ** * * *** ** ** * ** * ***** consensus_866#0 ATATGTGTGTATGTGTGTGTGTGCGTGTGGAGACGAGCAAAGTGTGTGCTGGGAAGTGGA 478 consensus_866#1 AGCCGTGACGATGCTTGTTGGGGCA-ATATAAATGGATGCACTTTTTTCGTGACAACAGC 414 * *** *** *** * ** * * * * * * * * * * * * consensus_866#0 ATCCTTCGCACCAGTCGTGGTTTAGATTACTTTTCCTTTTTTGAGTTTGAATGGTGCCCG 538 consensus_866#1 TGCATTGTTACGA----CAGTTGAGTTCGGTGCATAGAACCTGGACCCGGGAGG-----A 465 * ** ** * *** ** * * ** * ** consensus_866#0 CGATAGAAACTCAAAATTGATTGCCTTCGGAAACCG-ATTGGCGGCGGCTCTTCGGCAAG 597 consensus_866#1 CGACGGAACACCACCAAC--CTGCTTACTGGGGCTGCATCGAAGTAGGTGCAGTGAAAAG 523 *** *** ** * *** * * * * * ** * * ** * * *** consensus_866#0 GTCCTGCTCGTCCTCGTCGTCGGACGAAGACCTCAATGAACGACCACCACCACCGTC 654 consensus_866#1 TGATTTCTTGGTCCACACAACAGACACATACACAC---------------------- 558 * ** * * * * *** * ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||