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Anopheles gambiae
cluster # 8677 cluster # 8677       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8677#0 length = 1555 sequences # 8  
consensus_8677#1 length = 981 sequences # 2  
consensus_8677#2 length = 854 sequences # 1  

consensusID : consensus_8677#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1555
fasta sequence
                              [CCGCCCACGCGTCCGCTCATCCACTCGCCGGATTACTCGCGATTTGTTCGTGTTTCCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACGCTGCCCCGGAATGGGCTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCGATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGCCTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT-CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTAT-CGGTACCGCAGTGGCA-ACCTGTACGATTGTGGATCGCTTACC-TTCCGCGC--ACC-GT--GCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTC-TG-AAGGTGGTGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGAAGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAGTCGCTGCGTTCGAGTCGCCGATCGGTAAGGCGGACATTTTGTGCTCCGGTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCATGAAGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAAGAGTGCTTCCTCCATTTGGAATCGCCGGTGCTGAGAGTGACCGGTTGGGACACACCATTCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCCGAAAGCTGATCAACTACTAAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTTTTACATTCCTTTCTTCACTTTAAAAACCTCCAAATGATGTTGTGCAGAGAGAGAGAGAGAGAGAGAGTGCAGCCTATCGGTGTGTATGCGCTTACCTCATATTCCTATATATTCCAGATCGTGTACGTTGGTTCAGAATCAACAGCACACACAGCAACGGATGCATTTATATTTGACGTGCCCTAAGGAGAGGCGGGAGCCAAGGAAGGTTTCACTTTTCTTTCCTTTCGAGCTGGTCCCCTCCACCAACGGGTTCATTTTCCTGTGTAAGCTGTGTACTAAACGAATGCAAACAATTTCTTGTGCCTTATTAAAGTCTTCC]

[+] EMBL BM600817             [CCGCCCACGCGTCCGCTCATCCACTCGCCGGATTACTCGCGATTTGTTCGTGTTTCCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTTTCAACGGGCGTTAAAACGCTGCCCCGGAATGGGCTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCGAAGGCGCCGGTCGAGGGGCCCACGCAAAAGATGAACATGTTCCAGGCGATCAACCAAGCGATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGCCTGCAGAAGAAGTACGGCAAGCAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTTGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTAT CGGTACCGCAGCGGCA ACCTGTACGATTGTGGATCGCTTACT TTCCGCGC  ACC GT  GCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTC TG AAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM604331             [              ccgCATCCACTCGCCGGATTACTCGCGATTTGTTCGTGTTTCCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACGCTGCCCCGGAACGGGCTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCGATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTTGTGTTCGGTGAGGATGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGCCTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTAT CGGTACCGCAGTGGCA ACCTGTACGATTGTGGATCGCTTACC TTCCGCGC  ACG GT  GCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCATACGCCCGGTCTTGAAAGGTGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM578866             [                      ccgCGCCGGATTACTGGCGATTTGTTCGTGTTTCCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACACTGCCCCGGAATGGACTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCTATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGACTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTAT CGGTACCGCAGTGGCA ACCTGTACGATTGTGGATCGCTTACC TTCCGCGC  ACC GT  GCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTC TG AAGGTGGTGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM595983             [                                  ccgCGCGATTTGTTCGTGTTTCCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACGCTGCCCCGGAACGGGCTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCGATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTTGTGTTCGGTGAGGATGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGCCTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCCGGTACCGCAGTGGCAGCCCTGTACGATTGTGGATCGCTTACC TTCCGCGC  ACG GT  GCGGTGCAGTCGGACACGGTGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX605439             [                                               TCGTGTTTCCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACACTGCCCCGGAATGGACTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCTATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGACTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTAT CGGTACCGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AL692665             [                                                                                                                                                                                                                                                                                                                                                                                     GCGGGTGTTCAATACGCCCCTCTGCGAGCA GGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTTCCCCGGCGTTCGATCAGATCGTGAACGAGGCGG CAAGTAT CGGTACCGCAGTGGCA ACCTGTACGATTGTGGATCGCTTACCTTTCCGCGCCAACCGGTGGGCGGTGCAGTCGGACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM576702             [                                                                                                                                                                                                                                                                                                                                                                                           ccgCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTT CCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTAT CGGTACCGCAGTGGCA ACCTGTACGATTGTGGATCGCTTACC TTCCGCGC  ACC GT  GCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCATACGCCCGGTC TG AAGGTGGTGGTGCCGCGAGGACCGAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGAAGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAGTCGCTGCGTTCGAGTCGCCGATCGGTAAGGCGGACATTTTGTGCTCCGGTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCATGAAGCCCCATTGACGAACGGATTCGGCGCCGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX618431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCACGAAGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAAGAGTGCTTCCTCCATTTGGAATCGCCGGTGCTGAGAGTGACCGGTTGGGACACACCATTCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCCGAAAGCTGATCAACTACTAAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTTTTACATTCCTTTCTTCACTTTAAAAACCTCCAAATGATGTTGTGCAGAGAGAGAGAGAGAGAGAGAGTGCAGCCTATCGGTGTGTATGCGCTTACCTCATATTCCTATATATTCCAGATCGTGTACGTTGGTTCAGAATCAACAGCACACACAGCAACGGATGCATTTATATTTGACGTGCCCTAAGGAGAGGCGGGAGCCAAGGAAGGTTTCACTTTTCTTTCCTTTCGAGCTGGTCCCCTCCACCAACGGGTTCATTTTCCTGTGTAAGCTGTGTACTAAACGAATGCAAACAATTTCTTGTGCCTTATTAAAGTCTTCC]


>consensus_8677#0 CCGCCCACGCGTCCGCTCATCCACTCGCCGGATTACTCGCGATTTGTTCGTGTTTCCGAA CAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGA AGCTGGTATCGACGGGCGCTAAAACGCTGCCCCGGAATGGGCTGGTGCGCCACTCGTCCC ACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACA TGTTCCAGGCGATCAACCAAGCGATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGG TGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGCCTGCAGAAGA AGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCG CGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACA TCTTCCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCA ACCTGTACGATTGTGGATCGCTTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTG CATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTCTGAAGGTGG TGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGAAGGATAATG ATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAG TCGCTGCGTTCGAGTCGCCGATCGGTAAGGCGGACATTTTGTGCTCCGGTACCGATATCA CGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGA CGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGG AAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCATGAAGCCCCAT TGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAAGAGTGCTTCCTCCATT TGGAATCGCCGGTGCTGAGAGTGACCGGTTGGGACACACCATTCCCGCACGTGTTCGAAC CATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCCGAAAGCTGATCAACTACT AAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTTTTACATTCCTTTCTTCACTTTAAAAAC CTCCAAATGATGTTGTGCAGAGAGAGAGAGAGAGAGAGAGTGCAGCCTATCGGTGTGTAT GCGCTTACCTCATATTCCTATATATTCCAGATCGTGTACGTTGGTTCAGAATCAACAGCA CACACAGCAACGGATGCATTTATATTTGACGTGCCCTAAGGAGAGGCGGGAGCCAAGGAA GGTTTCACTTTTCTTTCCTTTCGAGCTGGTCCCCTCCACCAACGGGTTCATTTTCCTGTG TAAGCTGTGTACTAAACGAATGCAAACAATTTCTTGTGCCTTATTAAAGTCTTCC



consensusID : consensus_8677#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 981
fasta sequence
                              [CCGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCGCCTCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCAACCTGTACGATTGTGGATCGCTTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTCTGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGAAGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAGTCGCTGCATTCGAGTCGCCGATCGGTAAGGCGGACATCTTGCGCTCCGGTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCACGAAGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAAGAGTGCTTCCTCCATTTGGGAATCGCCGGTGCTGAGAGTGACCGGTTGGGACACACCATTCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCCGAAAGCTGATCAACTACTGAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTCTTACATTCCTTTCTTCACTTTAAAAACCTTCAAATGATGTTGTGCAGAGAGATAAAGAGAGAGAGTGAAGCCTTATCGGCTTTGTTCGGTGTGTATGCGCTTACCTCATATTCCTATATATTCCAGATCGTGTAAGTTGGNTCAAAATCAACAGCACACACAGCAACGGATGCATTTATATTTGACGT]

[+] EMBL BM651424             [CCGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCGCCTCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCAACCTGTACGATTGTGGATCGCTTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTCTGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGAAGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAGTCGCTGCATTCGAGTCGCCGATCGGTAAGGCGGACATCTTGCGCTCCGGTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCACGAAGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAAGAGTGCTTCCTCCATTTGGGAATCGCCGGTGCTGAGAGTGACCGGTTGGGACACACCATTCCCGCACGT                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX622084             [                                                                                                                                                                                                                                                      AGGGTTTACTGCTGGCTTGCGTGAAGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAGTCGCTGCGTTTGAGTCGCCGATCGGTAAGGCGGACATTTTGCGCTCCGGTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCCACGAAGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAAGAGTGTTTCCTGCATCT GGAATCGCCGGTGCTGAGGGTGACCGGTTGGGACACACCATTCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCCGAAAGCTGATCAACTACTGAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTCTTACATTCCTTTCTTCACTTTAAAAACCTTCAAATGATGTTGTGCAGAGAGATAAAGAGAGAGAGTGAAGCCTTATCGGCTTTGTTCGGTGTGTATGCGCTTACCTCATATTCCTATATATTCCAGATCGTGTAAGTTGGNTCAAAATCAACAGCACACACAGCAACGGATGCATTTATATTTGACGT]


>consensus_8677#1 CCGGTGCATGCTACCACTCCCAGAGCCCCGAAGCGTACTTTGCCGCCTCGTTCGATCAGA TCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCAACCTGTACGATTGTGGATCGC TTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGCC CCGAAGCGTACTTTGCCCACACGCCCGGTCTGAAGGTGGTGGTGCCGCGCGGACCAAACA AGGCGAAGGGTTTACTGCTGGCCTGCGTGAAGGATAATGATCCGTGCATCGTATTCGAAC CGAAAACCCTGTACCGTGCGGCGGTCGAGGAAGTTCCAGTCGCTGCATTCGAGTCGCCGA TCGGTAAGGCGGACATCTTGCGCTCCGGTACCGATATCACGCTCGTGGGCTGGGGCACAC AGATCCATGTGCTGCAGGAGGTAGCCAACATGGCAAAGACGCAACTCGACGTCAGCTGCG AGGTGATCGATCTGGTATCAATCCTTCCCTGGGACAAGGAAACGATCTGTAACTCGGTTA AGAAGACGGGTCGCGTACTGATCGCCCACGAAGCCCCATTGACGAACGGATTCGGCGCCG AGCTGGCCGCCACCATCCAGGAAGAGTGCTTCCTCCATTTGGGAATCGCCGGTGCTGAGA GTGACCGGTTGGGACACACCATTCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAG CACCGCTGCCTGGCCGGCATCCGAAAGCTGATCAACTACTGAGCACTGTCCGCAGCAGTG AAGGGAGCGCTTCTTACATTCCTTTCTTCACTTTAAAAACCTTCAAATGATGTTGTGCAG AGAGATAAAGAGAGAGAGTGAAGCCTTATCGGCTTTGTTCGGTGTGTATGCGCTTACCTC ATATTCCTATATATTCCAGATCGTGTAAGTTGGNTCAAAATCAACAGCACACACAGCAAC GGATGCATTTATATTTGACGT



consensusID : consensus_8677#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 854
fasta sequence
                              [CAGAATCGCGCACGAGGCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACACTGCCCCGGAATGGACTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCTATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGACTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTTCCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCAACCTGTACGATTGTGGATCGCTTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGACCCCGAAGCGTACTTTGCCCACAACGCCCGGTCTGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGGCGAAAGGGTTACTGCTGGCCTGCGTTGGAAAAGGGGGCATTACATTGGATTCCCGGTGGCAATCCGGTAATTTCCGAAGANCCGGAAAAAAAGCCCTTGTNACCCGTGGCGGGACGGGTTCGAAGGAAAGTTCCNAGTTCGGCTTGGANTTCGNAGTCGCCGAATACGGAGTAAAAGGCGGACCANTTCTGGGAGCTCACAGGGTA]

[+] EMBL BX467467             [CAGAATCGCGCACGAGGCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACACTGCCCCGGAATGGACTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCTATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGACTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTTCCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCAACCTGTACGATTGTGGATCGCTTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGACCCCGAAGCGTACTTTGCCCACAACGCCCGGTCTGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGGCGAAAGGGTTACTGCTGGCCTGCGTTGGAAAAGGGGGCATTACATTGGATTCCCGGTGGCAATCCGGTAATTTCCGAAGANCCGGAAAAAAAGCCCTTGTNACCCGTGGCGGGACGGGTTCGAAGGAAAGTTCCNAGTTCGGCTTGGANTTCGNAGTCGCCGAATACGGAGTAAAAGGCGGACCANTTCTGGGAGCTCACAGGGTA]


>consensus_8677#2 CAGAATCGCGCACGAGGCGAACAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAAC CCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTAAAACACTGCCCCGGAATG GACTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGG GGCCCACGCAAAAAATGAACATGTTCCAGGCGATCAACCAAGCTATGGATATTGCACTGG AGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCT GCTCGATGGGACTGCAGAAGAAGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCG AGCAGGGCATTGCCGGGTTCGCGATCGGTGTGGCCAACACGGGCGCCAAAGCGATTGCCG AGATGCAGTTTGCGGACTACATCTTCCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCA AGTATCGGTACCGCAGTGGCAACCTGTACGATTGTGGATCGCTTACCTTCCGCGCACCGT GCGGTGCAGTCGGACACGGTGCATGCTACCACTCCCAGAGACCCCGAAGCGTACTTTGCC CACAACGCCCGGTCTGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGGCGAAAGGGTTAC TGCTGGCCTGCGTTGGAAAAGGGGGCATTACATTGGATTCCCGGTGGCAATCCGGTAATT TCCGAAGANCCGGAAAAAAAGCCCTTGTNACCCGTGGCGGGACGGGTTCGAAGGAAAGTT CCNAGTTCGGCTTGGANTTCGNAGTCGCCGAATACGGAGTAAAAGGCGGACCANTTCTGG GAGCTCACAGGGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8677#0      CCGCCCACGCGTCCGCTCATCCACTCGCCGGATTACTCGCGATTTGTTCGTGTTTCCGAA 60
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      CAGTTTTCTCATTTTACCTTCTGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGA 120
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      AGCTGGTATCGACGGGCGCTAAAACGCTGCCCCGGAATGGGCTGGTGCGCCACTCGTCCC 180
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      ACTTTGTGTACCAGCCCGACGCAAAGGCGCCGGTCGAGGGGCCCACGCAAAAAATGAACA 240
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TGTTCCAGGCGATCAACCAAGCGATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGG 300
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TGTTCGGTGAGGACGTGGCGTTCGGTGGCGTGTTCCGCTGCTCGATGGGCCTGCAGAAGA 360
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      AGTACGGCAAGGAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGGCATTGCCGGGTTCG 420
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      CGATCGGTGTG-GCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTAC 479
consensus_8677#1      ---CCGGTGCATGCTACCAC---TCCCAGAGCC----CCGAAGCGTACTTTGCCGCCT-- 48
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      ATCTTCCCGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGC 539
consensus_8677#1      ----------CGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGC 98
consensus_8677#2      -----------------CAGAATCGCGCACGAGGCGAACA-GTTTTCTCATTTTACCTTC 42
                                           **** * ********  ** ** *    *    *    *

consensus_8677#0      AACCTGTACGATTGTGGATCGCTT---ACCTTCCGCGCACCGTG----CGGTGCAGTCGG 592
consensus_8677#1      AACCTGTACGATTGTGGATCGCTT---ACCTTCCGCGCACCGTG----CGGTGCAGTCGG 151
consensus_8677#2      TGCCACAAAAACCGCAACCCGCAATGAACGTTCTGCAGAAGCTGGTATCGACGGGCGCTA 102
                        **   *  *  *     ***     ** *** **  *   **    **  *    *  

consensus_8677#0      ACACGGTGCATGCTACCACTCCCA-GAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTC 651
consensus_8677#1      ACACGGTGCATGCTACCACTCCCA-GAGCCCCGAAGCGTACTTTGCCCACACGCCCGGTC 210
consensus_8677#2      AAACACTGCCCCGGAATGGACTGGTGCGCCACTCGTCCCACTTTGTGTACCAGCCCGACG 162
                      * **  ***     *     *    * *** *    *  ******   **  *****   

consensus_8677#0      TGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGA 711
consensus_8677#1      TGAAGGTGGTGGTGCCGCGCGGACCAAACAAGGCGAAGGGTTTACTGCTGGCCTGCGTGA 270
consensus_8677#2      CAAAGGCGCCGGT--CGAGGGGCCCACGCAAAA-AATGAACATGTTCCAGGC------GA 213
                        **** *  ***  ** * ** ***  ***    * *    *  * * ***      **

consensus_8677#0      AGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGG 771
consensus_8677#1      AGGATAATGATCCGTGCATCGTATTCGAACCGAAAACCCTGTACCGTGCGGCGGTCGAGG 330
consensus_8677#2      TCAACCAAGCTATGGATATTGCACTGGAGCAGAACGAGTCGGCCCTGGTGTTCGGTGAGG 273
                         *  * * *  *   ** * * * ** * ***      *  **  * *   *  ****

consensus_8677#0      AAGTTCCAGTCGCTGCGTTCGAGTCGCCGATCGGTAAG---GCGGACATTTTGTGCTCCG 828
consensus_8677#1      AAGTTCCAGTCGCTGCATTCGAGTCGCCGATCGGTAAG---GCGGACATCTTGCGCTCCG 387
consensus_8677#2      ACGTGGCGTTCGGTG-GCGTGTTCCGCTGCTCGATGGGACTGCAGAAGAAGTACGGCAAG 332
                      * **  *  *** **     *   *** * *** *  *   ** **     *  *    *

consensus_8677#0      GTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCA 888
consensus_8677#1      GTACCGATATCACGCTCGTGGGCTGGGGCACACAGATCCATGTGCTGCAGGAGGTAGCCA 447
consensus_8677#2      GAGCGGGTGTTCAATACGCCCCTCTGCGAGCAGGG---CAT-TGCCG-GGTTCGCGATCG 387
                      *  * * * *      **       * *  **  *   *** *** *  *   *    * 

consensus_8677#0      ACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTC 948
consensus_8677#1      ACATGGCAAAGACGCAACTCGACGTCAGCTGCGAGGTGATCGATCTGGTATCAATCCTTC 507
consensus_8677#2      GTGTGGCCAACACGGGCGCCAAAGCGATTGCCGAGATGCAGTTTGCGGACTACATCTTCC 447
                         **** ** ***     * * *  *    **** **     *  **  *  *** * *

consensus_8677#0      CCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCC 1008
consensus_8677#1      CCTGGGACAAGGAAACGATCTGTAACTCGGTTAAGAAGACGGGTCGCGTACTGATCGCCC 567
consensus_8677#2      CGGCGTTCGATCAGATCGTGAACGAGGCGGCCAAGTATCGGTACCGCAGTGGCAACCTGT 507
                      *   *  * *  * *   *     *  ***  *** *   *   ***      * *    

consensus_8677#0      ATGA----AGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAA 1064
consensus_8677#1      ACGA----AGCCCCATTGACGAACGGATTCGGCGCCGAGCTGGCCGCCACCATCCAGGAA 623
consensus_8677#2      ACGATTGTGGATCGCTTACCTTCCGCGCACCGTGCGGTGCAGTCGGACACGGTGCATGCT 567
                      * **     *  *  **  *   **    * * ** * ** * * * ***  * ** *  

consensus_8677#0      GAGTGCTTCCTCCATTTGG-AATCGC-CGGTGCTGAGAGTGACCGGTTGGGACACACCAT 1122
consensus_8677#1      GAGTGCTTCCTCCATTTGGGAATCGC-CGGTGCTGAGAGTGACCGGTTGGGACACACCAT 682
consensus_8677#2      -ACCACTCCCAGAGACCCCGAAGCGTACTTTGCCCACAACGCCCGGTCTGAAGGTGGTGG 626
                       *   ** **          ** **  *  ***  * *  * *****  * *        

consensus_8677#0      TCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCC 1182
consensus_8677#1      TCCCGCACGTGTTCGAACCATTCTACATTCCCGACAAGCACCGCTGCCTGGCCGGCATCC 742
consensus_8677#2      TGCCGCG------CGGACCAA---ACAAGGGCGA-AAGGGTTACTGC-TGGCCTGCGTTG 675
                      * ****       ** ****    ***    *** ***     **** ***** ** *  

consensus_8677#0      GAAAGCTGATCAACTACTAAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTTTTACATTCC 1242
consensus_8677#1      GAAAGCTGATCAACTACTGAGCACTGTCCGCAGCAGTGAAGGGAGCGCTTCTTACATTCC 802
consensus_8677#2      GAAAAGGGGGCA-TTACATTGGATTCCCGGTGGCAATCCGGTAA---TTTCCGAAGANCC 731
                      ****   *  **  ***   * * *  * *  *** *   *  *    **   *    **

consensus_8677#0      TTTCTTCACTTTAAAAACCTCCAAATGATGTTGTGCAGAGAGAGAGAGAGAGAGAGAGTG 1302
consensus_8677#1      TTTCTTCACTTTAAAAACCTTCAAATGATGTTGTGCAGAGAGATAAAGAGAGAGAGTGAA 862
consensus_8677#2      -------GGAAAAAAAGCCCTTGTNACCCGTGGCGGGACGGGTTCGAAGGAAAGTTCCNA 784
                                  **** **          ** * *    * *    *  ** **      

consensus_8677#0      -------CAGCCTA--TCGGTGTGTATGCGCTTACCTCATATTCCTATATATTCCAGATC 1353
consensus_8677#1      GCCTTATCGGCTTTGTTCGGTGTGTATGCGCTTACCTCATATTCCTATATATTCCAGATC 922
consensus_8677#2      GT----TCGGCTTG-------GANTTCGNAGTCGCCGAATA-------------CGGA-- 818
                             * ** *        *  *  *   *  **  ***             * **  

consensus_8677#0      GTGTACGTTGGTTCAGAATCAACAGCACACACAGCAACGGATGCATTTATATTTGACGTG 1413
consensus_8677#1      GTGTAAGTTGGNTCAAAATCAACAGCACACACAGCAACGGATGCATTTATATTTGACGT- 981
consensus_8677#2      GTAAAAGGCGGACCANTTCTGGGAGCTCACAGGGTA------------------------ 854
                      **  * *  **  **        *** ****  * *                        

consensus_8677#0      CCCTAAGGAGAGGCGGGAGCCAAGGAAGGTTTCACTTTTCTTTCCTTTCGAGCTGGTCCC 1473
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      CTCCACCAACGGGTTCATTTTCCTGTGTAAGCTGTGTACTAAACGAATGCAAACAATTTC 1533
consensus_8677#1      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TTGTGCCTTATTAAAGTCTTCC 1555
consensus_8677#1      ----------------------
consensus_8677#2      ----------------------
                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)