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Anopheles gambiae
cluster # 8678 cluster # 8678       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8678#0 length = 1041 sequences # 6  
consensus_8678#1 length = 716 sequences # 2  
consensus_8678#2 length = 664 sequences # 2  
consensus_8678#3 length = 489 sequences # 1  

consensusID : consensus_8678#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1041
fasta sequence
                              [CCGCACTGTTAGCCTTACACCTTCGATTAATGCTGGGTTATTTTCCTGAATAACGTGTAACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTAATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCACAAAGCAATTGAAAAAATCTGGAATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGT-GGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTATTCTGTTCTATGGGATATACAGTTCCTGTTTGGTAATCTCGCCTTAATTGGTGCACTCTTACTCGTTCTAGCGGAGTCACGAGGTGAAGCTCGGTCACTTTTCGCAGGTATTCCATCGCTCGGGGAAAACAAACCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCATGTTTATCATTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGGATCCATATTGATGGTGTTAGTAACAATTGGATACAAAACAAAGCTCTCATCTCTTATTTTAGTTGCCCTGCTTACTATTCT]

[+] EMBL BM613073             [CCGCACTGTTAGCCTTACACCTTCGATTAATGCTGGGTTATTTTCCTGAATAACGTGTAACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTGATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCGCAAAGCAATTGAAAAAATCTGGTATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGTGGGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATG                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM642488             [                                         ccgCCTGAATAACGTGTAACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTAATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCACAAAGCAATTGAAAAAATCTGGAATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGT GGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGG                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX604444             [                                                          AACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTAATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCACAAAGCAATTGAAAAAATCTGGAATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGT GGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTATTCTGT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM583158             [                                                          ccgATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACGAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTAATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCACAAAGCAATTGAAAAAATCTGGAATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGT GGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTATTCTGTTCTATGGGATATACAGTTCCTGTTTG                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM649073             [                                                                                                 GCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTGATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCGCAAAGCAATTGAAAAAATCTGGTATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGT GGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTATTCTGT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM635384             [                                                                                                                                                                                                                                                                                                                                                               ccgTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGT GGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTATTCTGTTCTATGGGATATACAGTTCCTGTTGCGTAATCTCGCCTTAATTGGTGCACTCTTACTCGTTCTAGCGGAGTCACGAGGTGAAGCTCGGTCACTTTTCGCAGGTATTCCATCGCTCGGGGAAAACAAACCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCATGTTTATCATTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGGATCCATATTGATGGTGTTAGTAACAATTGGATACAAAACAAAGCTCTCATCTCTTATTTTAGTTGCCCTGCTTACTATTCT]


>consensus_8678#0 CCGCACTGTTAGCCTTACACCTTCGATTAATGCTGGGTTATTTTCCTGAATAACGTGTAA CATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTG TATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCA CATTCGTATATTAATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGG ATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCACAA AGCAATTGAAAAAATCTGGAATAAGTGGATGAAGATTAATACATCACACATATTTGATTA ACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGA AAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGT CGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATG GAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGTGGAAAATTTTTGGCCACAAC TTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACT GAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTA TTCTGTTCTATGGGATATACAGTTCCTGTTTGGTAATCTCGCCTTAATTGGTGCACTCTT ACTCGTTCTAGCGGAGTCACGAGGTGAAGCTCGGTCACTTTTCGCAGGTATTCCATCGCT CGGGGAAAACAAACCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCAT GTTTATCATTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGG ATCCATATTGATGGTGTTAGTAACAATTGGATACAAAACAAAGCTCTCATCTCTTATTTT AGTTGCCCTGCTTACTATTCT



consensusID : consensus_8678#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 716
fasta sequence
                              [CCGCGGACGCGTGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGGGTTGGCACGGGATATATTTATTTGTAATTGCTATTGCTGGTTTCATAAAACATACATCGTATTATTGGAATGATTAACATAGCTAGAAAGATTTTTTCCATTTACTCGTTCCTATTCATACCAAAAAAACTTGGTGGGCAATATAAAACTTGGTTTTGTCTCAATCTGCCTGTTTGCAAAAAATGAATGTAATTGATTTTTAATTAAATTTTAACGACTGTTTTGATTTTGTATTAAGCCTGTTCACCATTTTTTCTTGTGCTCATCCATAGAAACACCGCCTGGCCCTAGTGATACAATCATTAATAAGCCACCAATAACAGAGAGCGTCTGAAAGAAGTCATATTTAAGAAAATCGCGAAGAGGTTTGTATGATGGTATAGTCCACCAAGCATTGTGGTATAAGTTAAGAATAGTAAGCAGGGCAACTAAAATAAGAGATGAGAGCTTTGTTTTGTATCCAATTGTTACTAACACCATCAATATGGATCCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCATGTTTATCACTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGGATCCATATTGATGGTGTTAGTAACAATTGGATACAAAATAAGAGATGAGAGCTTTGTTCGG]

[+] EMBL BM578061             [CCGCGGACGCGTGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGGGTTGGCACGGGATATATTTATTTGTAATTGCTATTGCTGGTTTCATAAAACATACATCGTATTATTGGAATGATTAACATAGCTAGAAAGATTTTTTCCATTTACTCGTTCCTATTCATACCAAAAAAACTTGGTGGGCAATATAAAACTTGGTTTTGTCTCAATCTGCCTGTTTGCAAAAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BM592621             [                                                                                                                                                AAAGATTTTTTCCATTTACTCGTTCCTATTCATACCAGAAAAACTTGTTGTGCAATATAAAACTTAGTTTTGTCTCAATCTGCCTGTTTGCAAAAAATGAATGTAATTGATTTTTAATTAAATTTTAACGACTGTTTTGATTTTGTATTAAGCCTGTTCACCATTTTTTCTTGTGCTCATCCATAGAAACACCGCCTGGCCCTAGTGATACAATCATTAATAAGCCACCAATAACAGAGAGCGTCTGAAAGAAGTCATATTTAAGAAAATCGCGAAGAGGTTTGTATGATGGTATAGTCCACCAAGCATTGTGGTATAAGTTAAGAATAGTAAGCAGGGCAACTAAAATAAGAGATGAGAGCTTTGTTTTGTATCCAATTGTTACTAACACCATCAATATGGATCCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCATGTTTATCACTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGGATCCATATTGATGGTGTTAGTAACAATTGGATACAAAATAAGAGATGAGAGCTTTGTTCGG]


>consensus_8678#1 CCGCGGACGCGTGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGGGT TGGCACGGGATATATTTATTTGTAATTGCTATTGCTGGTTTCATAAAACATACATCGTAT TATTGGAATGATTAACATAGCTAGAAAGATTTTTTCCATTTACTCGTTCCTATTCATACC AAAAAAACTTGGTGGGCAATATAAAACTTGGTTTTGTCTCAATCTGCCTGTTTGCAAAAA ATGAATGTAATTGATTTTTAATTAAATTTTAACGACTGTTTTGATTTTGTATTAAGCCTG TTCACCATTTTTTCTTGTGCTCATCCATAGAAACACCGCCTGGCCCTAGTGATACAATCA TTAATAAGCCACCAATAACAGAGAGCGTCTGAAAGAAGTCATATTTAAGAAAATCGCGAA GAGGTTTGTATGATGGTATAGTCCACCAAGCATTGTGGTATAAGTTAAGAATAGTAAGCA GGGCAACTAAAATAAGAGATGAGAGCTTTGTTTTGTATCCAATTGTTACTAACACCATCA ATATGGATCCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCATGTTTA TCACTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGGATCCA TATTGATGGTGTTAGTAACAATTGGATACAAAATAAGAGATGAGAGCTTTGTTCGG



consensusID : consensus_8678#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 664
fasta sequence
                              [CCGCCCACGCGTCCGGTGTAACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTGATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCGCAAAGCAATTGAAAAAATCTGGTATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGTGGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATC]

[+] EMBL BM610701             [CCGCCCACGCGTCCGGTGTAACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAGGGCTAATTAAAAATAAATTCACATTCGTATATTGATTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCCAGCGTGTCATTTTATCCGCAAAGCAATTGAAAAAATCTGGTATAAGTGGATGAAGATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAATATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATGTGGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGTCATC]
[+] EMBL BM622658             [                                                                                                                                                           TTGGTTTAACAAATCTTTAACTGGATAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAGACTCCAGCGTGTCATTTTATCCGCAAAGCAATTGAAAAAATCTGGTATAAGTGGATGAATATTAATACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCAT                                                                                                                                                                                                                                                                                                                          ]


>consensus_8678#2 CCGCCCACGCGTCCGGTGTAACATAAAAAGTAGTATGTATTGTTTAATTCACGGTTGAGC TCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCATATTATACAAATCTCTTTAAG GGCTAATTAAAAATAAATTCACATTCGTATATTGATTGGTTTAACAAATCTTTAACTGGA TAGCTATTACAAATCATTCGGATTTCGGATTTCTTTGCGGACAAATATAACTTAAACTCC AGCGTGTCATTTTATCCGCAAAGCAATTGAAAAAATCTGGTATAAGTGGATGAAGATTAA TACATCACACATATTTGATTAACAAAAACATCTTAGCTGTCAACGACCATCAACAATGAA TATACCCAATCAATATATAGAAAAGACTGAAGAAGTTGCAGATCAGGTAATTAGAAAAGG CAAACATGTCCTCCCACATGTCGCCCGGTTATGCCTGATAGCAACATTCCTTGAGGATGG TATCCGGATGTGGGTGCAATGGAACGAGCAGCGCGAATACATGGATATGAACTGGGGATG TGGAAAATTTTTGGCCACAACTTTTGTTCTTATTAATCTATTAGGACAGTTAGGAGGATG CGTTATGGTTCTAGGACAACTGAAGGTCAGCATTGCCTGCTGGATTCTGTTTGCCATTGT CATC



consensusID : consensus_8678#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 489
fasta sequence
                              [ATCGCACGAGGNGTCAACATGCCTGTTTTTTTTTTCCTCCTGAATAACGTGTAACATAAAAAGTAGTATGTATATGTTTAATTTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCCATATTATACAAATCTCTTTAAGGGCTAATTACACANTAAATTCACCTTCGTATATTAATATGGTTTAACAAATCTTTAACTGGATAGNCTATTACCAAATCATATCGGATTTCGGATNTTCTTTTGCGGACNAATATAACTTAAACTCCACGTGTCACTATTATCCACAAAGCANATTGAGACACAAATCTNGGAATAAGTGGCACTANAACGATTAATACATNACACATATTTAGGAGTTAACCAAAAAACATCTTAGCTGTCAACGGACCATCAACCACACTGAATATAACCCAATCAAGTATATAGGAACAGACTTGAAACAAAGTCTCGGCCGAATCCGGGTCAAATTAGC]

[+] EMBL BX469632             [ATCGCACGAGGNGTCAACATGCCTGTTTTTTTTTTCCTCCTGAATAACGTGTAACATAAAAAGTAGTATGTATATGTTTAATTTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATAGTAAATGAATTCCCATATTATACAAATCTCTTTAAGGGCTAATTACACANTAAATTCACCTTCGTATATTAATATGGTTTAACAAATCTTTAACTGGATAGNCTATTACCAAATCATATCGGATTTCGGATNTTCTTTTGCGGACNAATATAACTTAAACTCCACGTGTCACTATTATCCACAAAGCANATTGAGACACAAATCTNGGAATAAGTGGCACTANAACGATTAATACATNACACATATTTAGGAGTTAACCAAAAAACATCTTAGCTGTCAACGGACCATCAACCACACTGAATATAACCCAATCAAGTATATAGGAACAGACTTGAAACAAAGTCTCGGCCGAATCCGGGTCAAATTAGC]


>consensus_8678#3 ATCGCACGAGGNGTCAACATGCCTGTTTTTTTTTTCCTCCTGAATAACGTGTAACATAAA AAGTAGTATGTATATGTTTAATTTCACGGTTGAGCTCTTTTAATATCTTTATTTTGTATA GTAAATGAATTCCCATATTATACAAATCTCTTTAAGGGCTAATTACACANTAAATTCACC TTCGTATATTAATATGGTTTAACAAATCTTTAACTGGATAGNCTATTACCAAATCATATC GGATTTCGGATNTTCTTTTGCGGACNAATATAACTTAAACTCCACGTGTCACTATTATCC ACAAAGCANATTGAGACACAAATCTNGGAATAAGTGGCACTANAACGATTAATACATNAC ACATATTTAGGAGTTAACCAAAAAACATCTTAGCTGTCAACGGACCATCAACCACACTGA ATATAACCCAATCAAGTATATAGGAACAGACTTGAAACAAAGTCTCGGCCGAATCCGGGT CAAATTAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8678#0      CCGCACTGTTAGCCTTACACCTTCGATTAATGCTGGGTTATTTTCCTGAATAACGTG-TA 59
consensus_8678#2      ---------------------------------------CCGCCCACGCGTCCGGTG-TA 20
consensus_8678#3      ------ATCGCACGAGGNGTCAACATGCCTGTTTTTTTTTTCCTCCTGAATAACGTG-TA 53
consensus_8678#1      ---CCGCGGACGCGTGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTG 57
                                                                        *    ** * 

consensus_8678#0      ACATAAAAAGTAGTATGTAT-TGTTTAATT-CACGGTTGA-GCTCTTTTAATATCTTTAT 116
consensus_8678#2      ACATAAAAAGTAGTATGTAT-TGTTTAATT-CACGGTTGA-GCTCTTTTAATATCTTTAT 77
consensus_8678#3      ACATAAAAAGTAGTATGTATATGTTTAATTTCACGGTTGA-GCTCTTTTAATATCTTTAT 112
consensus_8678#1      GGTTGGCACGGGATATATTTATTTGTAATT--GCTATTGCTGGTTTCATAAAACATACAT 115
                         *   * *   *** * * * * *****   *  ***  * * *  *** *  *  **

consensus_8678#0      TTTGTATAGTAAATGAATTCC-ATATTATACAAATCTCTTTAAGG-GCTAATTAAA-AAT 173
consensus_8678#2      TTTGTATAGTAAATGAATTCC-ATATTATACAAATCTCTTTAAGG-GCTAATTAAA-AAT 134
consensus_8678#3      TTTGTATAGTAAATGAATTCCCATATTATACAAATCTCTTTAAGG-GCTAATTACACANT 171
consensus_8678#1      CGTATTATTGGAATGATTAACATAGCTAGAAAGATTTTTTCCATTTACTCGTTCCTATTC 175
                        * *      ***** *  *     ** * * ** * **  *    **  **       

consensus_8678#0      AAATTCACATTCGTATATTAAT-TGGTTTAACAAATCTTTAACTGGATA-GC-TATTAC- 229
consensus_8678#2      AAATTCACATTCGTATATTGAT-TGGTTTAACAAATCTTTAACTGGATA-GC-TATTAC- 190
consensus_8678#3      AAATTCACCTTCGTATATTAATATGGTTTAACAAATCTTTAACTGGATA-GNCTATTACC 230
consensus_8678#1      ATACCAAAAAAACTTGGTGGGCAATATAAAACTTGGTTTTGTCTCAATCTGCCTGTTTGC 235
                      * *   *      *   *        *  ***     ***  **  **  *  * **   

consensus_8678#0      AAATCAT-------TCGGATTTCGGATTTC--TTTGCGGACAAATATAACTTAAACTCCA 280
consensus_8678#2      AAATCAT-------TCGGATTTCGGATTTC--TTTGCGGACAAATATAACTTAAACTCCA 241
consensus_8678#3      AAATCATA------TCGGATTTCGGATNTTCTTTTGCGGACNAATATAACTTAAACTCCA 284
consensus_8678#1      AAAAAATGAATGTAATTGATTTTTAATTAAATTTTAACGACTGTTTTGATTTTGTATTAA 295
                      ***  **          *****   **     ***   ***   * * * **    *  *

consensus_8678#0      GCGTGT-CATT-TTATCCACAAAGCAA-TTGAAA---AAATC--TGG-AATAAGTGG--- 328
consensus_8678#2      GCGTGT-CATT-TTATCCGCAAAGCAA-TTGAAA---AAATC--TGG-TATAAGTGG--- 289
consensus_8678#3      -CGTGT-CACTATTATCCACAAAGCANATTGAGACACAAATC--TNGGAATAAGTGGCAC 340
consensus_8678#1      GCCTGTTCACCATTTTTTCTTGTGCTCATCCATAGAAACACCGCCTGGCCCTAGTGA--- 352
                       * *** **   ** *       **   *  * *   * * *    *     ****    

consensus_8678#0      -ATGAAGATTAATACATCACACATATTTGA---TTAAC--AAAAACATCTTAGCTGTCAA 382
consensus_8678#2      -ATGAAGATTAATACATCACACATATTTGA---TTAAC--AAAAACATCTTAGCTGTCAA 343
consensus_8678#3      TANAACGATTAATACATNACACATATTTAGGAGTTAACCAAAAAACATCTTAGCTGTCAA 400
consensus_8678#1      TACAATCATTAATAAGCCACCAATAACAGAGA-GCGTCTGAAAGAAGTCATATTTAAGAA 411
                       *  *  *******    **  ***            *  *** *  ** **  *   **

consensus_8678#0      CG-ACCATCAACAA---TGAAT-ATA-CCCAATCAA-TATATAGAAA-AGACT--GAAGA 432
consensus_8678#2      CG-ACCATCAACAA---TGAAT-ATA-CCCAATCAA-TATATAGAAA-AGACT--GAAGA 393
consensus_8678#3      CGGACCATCAACCACACTGAAT-ATAACCCAATCAAGTATATAGGAACAGACTTGAAACA 459
consensus_8678#1      AA--TCGCGAAGAGGTTTGTATGATGGTATAGTCCACCAAGCATTGTGGTATAAGTTAAG 469
                           *   **      ** ** **     * ** *  *   *       *      *  

consensus_8678#0      AGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATG 492
consensus_8678#2      AGTTGCAGATCAGGTAATTAGAAAAGGCAAACATGTCCTCCCACATGTCGCCCGGTTATG 453
consensus_8678#3      AAGTCTCGGCCGAAT--CCGGGTCAAATTAGC---------------------------- 489
consensus_8678#1      AATAGTAAGCAGGGCAACTAAAATAAG-AGATGAGAGCTTTGTTTTGT-ATCCAATTGTT 527
                      *                       *                                   

consensus_8678#0      CCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCG 552
consensus_8678#2      CCTGATAGCAACATTCCTTGAGGATGGTATCCGGATGTGGGTGCAATGGAACGAGCAGCG 513
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      ACTAACACCATCAATA-TGGATCCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCT 586
                                                                                  

consensus_8678#0      CGAATACATGGATATGAACTGGGGATGTGGAAAATTTTTGGCCACAACTTTTGTTCTTAT 612
consensus_8678#2      CGAATACATGGATATGAACTGGGGATGTGGAAAATTTTTGGCCACAACTTTTGTTCTTAT 573
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      TGCATTCATGTTTATCACTTTGATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGA 646
                                                                                  

consensus_8678#0      TAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCAT 672
consensus_8678#2      TAATCTATTAGGACAGTTAGGAGGATGCGTTATGGTTCTAGGACAACTGAAGGTCAGCAT 633
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      TATTGTAGGATCCATATTGATGGTGTTAGTAACAATTGGATACAAAATAAGAGATGAGAG 706
                                                                                  

consensus_8678#0      TGCCTGCTGGATTCTGTTTGCCATTGTCATCCTACAAACAATCGCTTATTCTGTTCTATG 732
consensus_8678#2      TGCCTGCTGGATTCTGTTTGCCATTGTCATC----------------------------- 664
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      CTTTGTTCGG-------------------------------------------------- 716
                                                                                  

consensus_8678#0      GGATATACAGTTCCTGTTTGGTAATCTCGCCTTAATTGGTGCACTCTTACTCGTTCTAGC 792
consensus_8678#2      ------------------------------------------------------------
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      ------------------------------------------------------------
                                                                                  

consensus_8678#0      GGAGTCACGAGGTGAAGCTCGGTCACTTTTCGCAGGTATTCCATCGCTCGGGGAAAACAA 852
consensus_8678#2      ------------------------------------------------------------
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      ------------------------------------------------------------
                                                                                  

consensus_8678#0      ACCTAAGAGTTTCATGCAGTTAGCGGGGCGAATTCTTCTTGCATTCATGTTTATCATTTT 912
consensus_8678#2      ------------------------------------------------------------
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      ------------------------------------------------------------
                                                                                  

consensus_8678#0      GATCCGCTTCGAACTCAGTTTCATGCAAATACTGCAAGATATTGTAGGATCCATATTGAT 972
consensus_8678#2      ------------------------------------------------------------
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      ------------------------------------------------------------
                                                                                  

consensus_8678#0      GGTGTTAGTAACAATTGGATACAAAACAAAGCTCTCATCTCTTATTTTAGTTGCCCTGCT 1032
consensus_8678#2      ------------------------------------------------------------
consensus_8678#3      ------------------------------------------------------------
consensus_8678#1      ------------------------------------------------------------
                                                                                  

consensus_8678#0      TACTATTCT 1041
consensus_8678#2      ---------
consensus_8678#3      ---------
consensus_8678#1      ---------
                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)