These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8679#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1577 fasta sequence [CACATACGAAAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCG-TTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTACAACATTAAAGCACGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGTCGCGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG-AAGTGCT-GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGAGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGTTGAAAATATTAAGCAGGAGCGTCTCAACTTTGTACGGAAATACATTTAATTTTAATGCGAACAATGGAAAAAAATAAAAAAAAGGCAGCATG] [+] EMBL CNS097VB [CACATACGAAAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTACAACATTAAAGCACGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGTCGCGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAAGTGCT GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGAAATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTCG ] [+] EMBL CNS09KN2 [ AAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCG TTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTACAACATTAAAGCACGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGT GTGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG AAGTGCTAGGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGC ] [+] EMBL BX605296 [ ACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAACCGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCG TTCGTTAAAGCGTACGCACGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGC ] [-] EMBL CNS097VC [ GGCAACAAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGTTGAAG TTTCGCTTACCGGCCACGTCAGCACGGTGCGGGGGTTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG AAGTGCT GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAAAACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGGGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCCACTGGCGGCCGGAAATTATTAAGCGTTGAAAA ] [-] EMBL CNS09KN3 [ CCGGCCACGTCAGCACGGTGCGGGGGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG AAGTGCT GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAAAACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGAGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGT ] [-] EMBL BX466646 [ cgntgcCTGGTGNC GCCCGGCCCGATTCGACCGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGCCACACGAACACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGAGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAAGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGTAGAAAGTATTAAGCAGGAGCGTCTCAACTTTGTACGGAAATACATTTAATTTTAATGCGAACAATGGAAAAAAATAAAAAAAAGGCAGCATG] consensusID : consensus_8679#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 698 fasta sequence [CCGCGGACGCGTGGGCGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTATCAAAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAGCGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACGGACAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAACGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCCTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGA-TTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGC] [+] EMBL BM600555 [CCGCGGACGCGTGGGCGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTATCAAAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAGCGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACGGACAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAACGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCCTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGA TTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGC] [+] EMBL BM595864 [ ccgGCCGCAGCAGCTTCGTTTTATCAAAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAGCGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACGGACAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAACGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCCTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGATTTAAAATTTGGGAC ] consensusID : consensus_8679#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGCGTGGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCTACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCC] [+] EMBL BM577379 [CCGCCCACGCGTCCGCCCACGCGTCCGCGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGCGTGGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCTACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCC] consensusID : consensus_8679#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTATGGGTTGGAGGTTGCGTTCCGCATCCCGGCCCGCGCTACCGTCGAGCTGTCGATTGATTTCGACTACATTTTTCTCAAGTGGCAAGAGTACCCGCCGGATGCGAACCATGGTCACTACATTCCATCGTCGATCATTTCGCTGCTGCTGCCGTCCGCCCGCAACTACACCTCCATTCCGCGGGAGGCGGCCCTGTTCCGGGAGTCGTTCAATGCGACCCAGCTGGCCGGCTACTTTCTGCAGGTGCGGACCGAGGCGTTGCTGCTGACGCTTCCGACGCCGGATTTCAGCATGCCGTACAATGTGATCTGCCTGGCGTGTACAGTGGTGGCGCTTGCATTTGGGCCGATCCATAACATCTCCACGAAGCGCATCGTGGCGAAGGGCAAGGAAAAGGACAAAGTGTCGCTCGGGGAGAAGGTGAAGCAGTTTTTCAAAATTAATAAGAAGCCAACCAAAGAGGAGCACACGGCCAGCACGGAAGACTTGAATGCGCCCGACACGGAATAAAGACATGTCCACCCTCCCATG] [+] EMBL BM596709 [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTATGGGTTGGAGGTTGCGTTCCGCATCCCGGCCCGCGCTACCGTCGAGCTGTCGATTGATTTCGACTACATTTTTCTCAAGTGGCAAGAGTACCCGCCGGATGCGAACCATGGTCACTACATTCCATCGTCGATCATTTCGCTGCTGCTGCCGTCCGCCCGCAACTACACCTCCATTCCGCGGGAGGCGGCCCTGTTCCGGGAGTCGTTCAATGCGACCCAGCTGGCCGGCTACTTTCTGCAGGTGCGGACCGAGGCGTTGCTGCTGACGCTTCCGACGCCGGATTTCAGCATGCCGTACAATGTGATCTGCCTGGCGTGTACAGTGGTGGCGCTTGCATTTGGGCCGATCCATAACATCTCCACGAAGCGCATCGTGGCGAAGGGCAAGGAAAAGGACAAAGTGTCGCTCGGGGAGAAGGTGAAGCAGTTTTTCAAAATTAATAAGAAGCCAACCAAAGAGGAGCACACGGCCAGCACGGAAGACTTGAATGCGCCCGACACGGAATAAAGACATGTCCACCCTCCCATG] consensusID : consensus_8679#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 270 fasta sequence [AGATCCCCCGATTTAAACACACGCTGCGCTAAAGTTGCCGCAGCAGCTTCGTTACAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGGCACAACCATGGAGGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGGTTTTAAAAGGCCGGTTACGGCACGGATTTTTTTTTCGGTCGGCCAAAACCCAAAATTCGGCCTGGCCTTGGCCCGGGAAGATCGACCGAAACCACTTGAAAAGTTGAAATAC] [+] EMBL AL692682 [AGATCCCCCGATTTAAACACACGCTGCGCTAAAGTTGCCGCAGCAGCTTCGTTACAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGGCACAACCATGGAGGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGGTTTTAAAAGGCCGGTTACGGCACGGATTTTTTTTTCGGTCGGCCAAAACCCAAAATTCGGCCTGGCCTTGGCCCGGGAAGATCGACCGAAACCACTTGAAAAGTTGAAATAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8679#0 CACATACGAAAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCA 60 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------CCGCGGACGCGTGGGCGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTATCA 54 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 AAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAA 120 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 AAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAA 114 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTT 180 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 GTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTT 174 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 --------------------CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTATGGGTTG 40 consensus_8679#0 TTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTAC 240 consensus_8679#2 ------------------------------------------------------CCGCCC 6 consensus_8679#1 TTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATAC 234 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 GAGGTTGCGTTCCGCATCCCGGCCCGCGCTACCGTCGAGCTGTCGATTGATTTCGACTAC 100 consensus_8679#0 A-ACATTAAAGCACGGGAC-ACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGG 298 consensus_8679#2 ACGCGTCCGCCCACGCGTCCGCGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGG 66 consensus_8679#1 A-ACATTAAAGCTCGGGAC-ACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAG 292 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ATTTTTCTCAAGTGGCAAG--AGTACCCGCCGGATGCGAACCATGGTCACTACATTCCAT 158 consensus_8679#0 CGCTGGCAGCGAAGTCGCGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATG 358 consensus_8679#2 CGCTGGCAGCGAAGCGTGGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAGGATG 126 consensus_8679#1 CGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATG 352 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 CGTCGATCATTTCGCTGC-TGCTGCCGTCCGCCCGCAACTACACCTCCATTCCGCGGGAG 217 consensus_8679#0 GCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATG 418 consensus_8679#2 GCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATG 186 consensus_8679#1 GCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACG 412 consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 GCGGCCCTGTTCCGGGAGTCGTTCAATGCGACCCAGCTGGCCGGCTACTTTCTGCAGGTG 277 consensus_8679#0 GTCAGATGGCGCTGGTTCCTGCCGCTACCCCGAC---ACCCCAGGCTGCCTC-CAGCGCG 474 consensus_8679#2 GTCAGATGGCGCTGGTTCCTGCCGCTACCCCGAC---ACCCCAGGCTGCCTC-CAGCGCG 242 consensus_8679#1 GACAGATGGCGCTGGTTCCTGCCGCTACCCCGAC---ACCCCAGGCTGCCTC-CAACGCG 468 consensus_8679#4 -------------AGATCCC-CCGATTTAAACAC---ACGCTGCGCTAAAGT-TGCCGCA 42 consensus_8679#3 CGGACCGAGGCGTTGCTGCTGACGCTTCCGACGCCGGATTTCAGCATGCCGTACAATGTG 337 * * * ** * * * * * consensus_8679#0 GTGCAAATACTGCCAAAGAAAGCGC-CCACCATCCCGAAACCGAAATGGCACGCCCCGTG 533 consensus_8679#2 GTGCAAATACTGCCAAAGAAAGCGC-CTACCATCCCGAAACCGAAATGGCACGCCCCGTG 301 consensus_8679#1 GTGCAAATACTGCCAAAGAAAGCGC-CCACCATCCCGAAACCGAAATGGCACGCCCCCTG 527 consensus_8679#4 GCAGCTTCGTTACAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGGC 102 consensus_8679#3 ATCTGCCTGGCGTGTACAGTGGTGG-CGCTTGCATTTGGGCCGATCCATAACATCTCCAC 396 * * *** * consensus_8679#0 GAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCC 593 consensus_8679#2 GAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCC 361 consensus_8679#1 GAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCC 587 consensus_8679#4 ACAACCATGGAGGGAAGTTCAGCGTCACTCGG--TGCACACGTTGGTGTTCCGTTCGGTT 160 consensus_8679#3 GAAGC---GCATCGTGGCGAAGGGCAAG--GAAAAGGACAAAGTGTCGCTCGG-GGAGAA 450 * * * * * * * * * ** * * * consensus_8679#0 GGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGC 653 consensus_8679#2 GGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGC 421 consensus_8679#1 GGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGATTAAAATTTGGGACCTGGC 647 consensus_8679#4 TTAAAAGGCCGGTTACGGCACGGATTTTTTTT-TCGGTCGGCCAAAACCCAAAATTCGGC 219 consensus_8679#3 GGTGAAGCAGTTTTTCAAAATTAATAAGA------AGCCAACCAAAGAGGAGCACACGGC 504 ** * * * * * *** * *** consensus_8679#0 C-A-GCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCG 711 consensus_8679#2 C-A-GCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCG 479 consensus_8679#1 C-A-GCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGC------- 698 consensus_8679#4 CTG-GCCTTGGCCCGGGAAGATCG---ACCGAAACCACTTGAAAAGTTGAAATAC----- 270 consensus_8679#3 CAGCACGGAAGACTTGAATGC------GCCCGACACGGAATAAAGACATGTCCACCCTCC 558 * * * ** * * consensus_8679#0 GTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGG 771 consensus_8679#2 GTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGG 539 consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 CATG-------------------------------------------------------- 562 consensus_8679#0 GACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACG 831 consensus_8679#2 GACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACG 599 consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 ATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGC 891 consensus_8679#2 ATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGC 659 consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTC 951 consensus_8679#2 GTGTGGGACATGCGCACCAAGGCCAACATCC----------------------------- 690 consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACC 1011 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAG 1071 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 AGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGAC 1131 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 AACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAAC 1191 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 TCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAAT 1251 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCG 1311 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCC 1371 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGAC 1431 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGTTGAAAA 1491 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 TATTAAGCAGGAGCGTCTCAACTTTGTACGGAAATACATTTAATTTTAATGCGAACAATG 1551 consensus_8679#2 ------------------------------------------------------------ consensus_8679#1 ------------------------------------------------------------ consensus_8679#4 ------------------------------------------------------------ consensus_8679#3 ------------------------------------------------------------ consensus_8679#0 GAAAAAAATAAAAAAAAGGCAGCATG 1577 consensus_8679#2 -------------------------- consensus_8679#1 -------------------------- consensus_8679#4 -------------------------- consensus_8679#3 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||