cluster # 8739

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Anopheles gambiae
cluster # 8739 cluster # 8739 Sequences # 12 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8739#0 length = 1457 sequences # 8
consensus_8739#1 length = 638 sequences # 1

consensus_8739#2 length = 535 sequences # 1
consensus_8739#3 length = 442 sequences # 1
consensus_8739#4 length = 400 sequences # 1

consensusID : consensus_8739#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1457
fasta sequence

                              [CATGCTGCCCTTTTTTTTNTTTTTTTACCTTTTTATGATTTACAATTTTATTACGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAAAGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCA-GCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAA-CCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTG-CACTGCACACGGTGCAG-ACGGGTACGCGATTCGGCCAGTGTGTCCAGGTCTACCTCCGGCAGAGTTGCGTCCGGCCGTAGCCGTACCAGTTCGTCCATCTGCTTCTCGTACGTCACGCGCAGCCGGTACTGGTGGTCGTTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGCTGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTCTTCCAGGAGCGAGTCCAGCATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTCGATATGGATACTTCTCCGCCAGATAGCGATGGAGTGTGACGAAATCTTTGTACCGGCGGCGGACCGTCTTCTCGATGCCCTTCAGCTTGATCTCATACTCCGAGTGCTTGAGGAAGAGTCCTTTTTTCTCCGGCACAATCAGCACGCTAACGGGCGACTCGTTCAGCTCCCGTTCCGTCGAGTCATCGCCTGCAATTAGTGTA]

[+] EMBL BX466685             [CATGCTGCCCTTTTTTTTNTTTTTTTACCTTTTTATGATTTACAATTTTATTACGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAAAGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGNATAGTTGACTGTGCGCATGNAA AACTCCAGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX613619             [                                            ATTTTATTACGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAAAGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGGTCCGTTCGCATAGTTGACTGTGCGCATGCAACACGTCCA GCAGTACGTCCAACCGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08LKE             [                                                                                                                                            TATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGAAAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCAAAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGAACAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCA GCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAA CCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGAAAAAGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTG CACTGCACACGGTGCAGAAGGGGTACGCGATTTGGCCAGTGTGTCCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BX628159             [                                                                                                                                                                     TTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCA GCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAA CCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08LKD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCGCCATAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCAACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGTTTTTTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCA GCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAACCCTG TTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTGCCACT CACACGGTGCAG ACGGGTACGCGATTCGGCCAGTGTGTCCAGGTCTACCTCCGGCAGAGTTGCGTCCGGCCGTAGCCGTACCAGTTCGTCCATCTGCTTCTCGTACGTCACGCGCAGCCGGTACTGGTGGTCGTTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGCTGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTCTTCCAGGAGCGAGTCCAGCATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTCGATATGGATACTTCTCCGCCAGATAGCGATGGAGTGTGACGAAATCTTTGTACCGGCGGCGGACCGTCTTCTCGATGCCCTTCAGCTTGATCTCATA                                                                                                          ]
[-] EMBL BX609793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCA GCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAA CCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATG GTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGACGTCGGTTATGGCACAGGCGTCGATCGAACAGTTGCTTCAACCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BX628080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATCAGCCGCTCACTCGCGGACAGATCNTCGAACGTTGCGTCNTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTG CACTGCACACGGTGCAG ACGGGTACGCGATTCGGCCAGTGTGTCCAGGTCTACCTCCGGCAGAGTTGCGTCCGGCCGTAGCCGTACCAGTTCGTCCATCTGCTTCTCGTACGTCACGCGCAGCCGGTACTGGTGGTCGTTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGCTGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTCTTCCAGGAGCGAGTCCAGCATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTCGATATGGATACTTCTCCGCCAGATAGCGATGGAGTGTGACGAAATCTTTGTACCGGCGGCGGACCGTCTTCTCGATGCCCTTCAGCTTGATCTCATACTCCGAGTGCTTGAGGAAGAGTCCTTTTTTCTCCGGCACAATCAGCACGCTAACGGGCGACTCGTTCAGCTCCCGTTCCGTCGAGTCATCGCCTGCAATTAGTGTA]
[-] EMBL BX627514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGCTTACGATTGGGGAGCTGCCCAGTACNGGGTGGAGTGACANGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTCTTCCAGGAGCGAGTCCAGCATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTAGATATGGATACTTCTCCGCCAGATAGCGATGGAGTGTGACGAAATCTTTGTACCGGCG                                                                                                                                                 ]




>consensus_8739#0
CATGCTGCCCTTTTTTTTNTTTTTTTACCTTTTTATGATTTACAATTTTATTACGTATTT
AACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAA
AGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTA
CCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATT
CAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTG
TACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAG
ACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCT
CGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCG
TTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGA
ACGCGGAACCATTCGCTTCATTTTGTTGCGCCATAGTACCGGTTTGATTCATCGCATGAG
CTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTCCCTGTCAGCGTTC
TCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCA
ACACCTCCAGCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGC
GCTCAACCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCT
CGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGC
CTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGC
TGCACTGCACACGGTGCAGACGGGTACGCGATTCGGCCAGTGTGTCCAGGTCTACCTCCG
GCAGAGTTGCGTCCGGCCGTAGCCGTACCAGTTCGTCCATCTGCTTCTCGTACGTCACGC
GCAGCCGGTACTGGTGGTCGTTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGC
TGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTT
CTTCCAGGAGCGAGTCCAGCATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTCGATATG
GATACTTCTCCGCCAGATAGCGATGGAGTGTGACGAAATCTTTGTACCGGCGGCGGACCG
TCTTCTCGATGCCCTTCAGCTTGATCTCATACTCCGAGTGCTTGAGGAAGAGTCCTTTTT
TCTCCGGCACAATCAGCACGCTAACGGGCGACTCGTTCAGCTCCCGTTCCGTCGAGTCAT
CGCCTGCAATTAGTGTA

consensusID : consensus_8739#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence

                              [AATTTTATTACGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAAAGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTGGAGTGAAAGAAAGATTTACGAAACATTTCCAACGGTTAGTAGGGCTGGGGGCGAGGCAGGCCGCCGATCGACTGTGATCGACACTACTGAGTGCAAGCGTTACCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATA]

[-] EMBL BX621757             [AATTTTATTACGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAAAGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTGGAGTGAAAGAAAGATTTACGAAACATTTCCAACGGTTAGTAGGGCTGGGGGCGAGGCAGGCCGCCGATCGACTGTGATCGACACTACTGAGTGCAAGCGTTACCTTCTGATGGTGCTGTTGCTCCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATA]




>consensus_8739#1
AATTTTATTACGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAA
TCTTAGGTTCCTAAGAAAGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAA
AGTTCATACGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACG
TATCACTAATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCT
TTCCCTGCCATTTCCTGTACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGT
TTAGTCGAGCCGGCTAGACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTGGAG
TGAAAGAAAGATTTACGAAACATTTCCAACGGTTAGTAGGGCTGGGGGCGAGGCAGGCCG
CCGATCGACTGTGATCGACACTACTGAGTGCAAGCGTTACCTTCTGATGGTGCTGTTGCT
CCTCGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCA
GCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTTGCTT
CGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATA

consensusID : consensus_8739#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 535
fasta sequence

                              [GCTCAACCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTGCACTGCACACGGTGCAGGCGGGTACGCGATTCGGCCAGCGTGTCCAGGTTCACCTCCGGCAGAGTTGCGTCCGGCCGTAGCCGTACCAGCTCGTCCATCTGCTTCTCGTACGTCACGCGCAGCCGGTACTGGTGGTGGTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGCTGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTCTTCCAGGAGCGAGTCCAACATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTAGCAGGTTTTACATTTCCCATTAGAATGATTAAATCCAAGGCGAATATTTCAACTCCTCTAGT]

[-] EMBL BX601982             [GCTCAACCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTGCACTGCACACGGTGCAGGCGGGTACGCGATTCGGCCAGCGTGTCCAGGTTCACCTCCGGCAGAGTTGCGTCCGGCCGTAGCCGTACCAGCTCGTCCATCTGCTTCTCGTACGTCACGCGCAGCCGGTACTGGTGGTGGTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGCTGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTCTTCCAGGAGCGAGTCCAACATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTAGCAGGTTTTACATTTCCCATTAGAATGATTAAATCCAAGGCGAATATTTCAACTCCTCTAGT]




>consensus_8739#2
GCTCAACCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCT
CGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGC
CTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGC
TGCACTGCACACGGTGCAGGCGGGTACGCGATTCGGCCAGCGTGTCCAGGTTCACCTCCG
GCAGAGTTGCGTCCGGCCGTAGCCGTACCAGCTCGTCCATCTGCTTCTCGTACGTCACGC
GCAGCCGGTACTGGTGGTGGTGGTGGTGTCGCGCAGGAAGGTGCTTACGATTGGGGAGCT
GCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCGCGCCGCCGTTC
TTCCAGGAGCGAGTCCAACATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTAGCAGGTT
TTACATTTCCCATTAGAATGATTAAATCCAAGGCGAATATTTCAACTCCTCTAGT

consensusID : consensus_8739#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence

                              [GCGANTTNGAGCTTGCTTCGAACGCGGAACCATTCGCCTTCATCTCTTCGTTGCGCCACTAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTACCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCAGCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAACCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACCCATCGTGCCGAATTCTGC]

[-] EMBL BX469801             [GCGANTTNGAGCTTGCTTCGAACGCGGAACCATTCGCCTTCATCTCTTCGTTGCGCCACTAGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGCTCCCGGAGACTTACCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCGTTCGCATAGTTGACTGTGCGCATGCAACACCTCCAGCAGTACGTCCAACCGTTCGGTAACGGCACGCTGCTGCACCTGCACATAGCGCTCAACCTGCTTCGCAATCAGCCGCTCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAGAATGCGTTCGATTTCGGCACACTCGCCTGTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACCCATCGTGCCGAATTCTGC]




>consensus_8739#3
GCGANTTNGAGCTTGCTTCGAACGCGGAACCATTCGCCTTCATCTCTTCGTTGCGCCACT
AGTACCGGTTTGATTCATCGCATGAGCTTTGACTTTCACTCGACTGCTTCCTGCATTAGC
TCCCGGAGACTTACCTGTCAGCGTTCTCTGCTGATCAGCTACGATGCTTTTTTCGATCCG
TTCGCATAGTTGACTGTGCGCATGCAACACCTCCAGCAGTACGTCCAACCGTTCGGTAAC
GGCACGCTGCTGCACCTGCACATAGCGCTCAACCTGCTTCGCAATCAGCCGCTCACTCGC
GGACAGATCCTCGAACGTTGCGTCCTCGTTGAATGCGTCGCGCAGATCGGGACTCTGCAG
AATGCGTTCGATTTCGGCACACTCGCCTGTTGACGTCGGTTATGGCCCAGGCGTCGATCG
AACCCATCGTGCCGAATTCTGC

consensusID : consensus_8739#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 400
fasta sequence

                              [CTGCAGGCGGCAAGGTCTCCCGATTCGCACGTGTGTACGTGTGGTTGCGATCGATCACGTACAGGGTGGTGACGGGCTCAAACTGGCATCTCTTCGGGCTAATGATCGTGCATAGGCTCGTGCACGTTCTATGTAGCGGTGCGAATGATTGTTGGCAATAATACCATTCTAGATGTTGTAGGCTGGTATGATTACTCATCACTTTAACCATTGCTAATGGGTAATAACGACCAACGAGGTACGTTTATTATCAGCAAATCATTGTGAAGGTTAAAGCACTAGAGGAGTTGAAATATTCGCCTTGGATTTAATCATTCTAATGGGAAATGTAAAACCTGCTGTATGTATACAATCCAACAAGCTGTTAAGAAAATAAGGATCTCTAAATGGTTCCATAATT]

[+] EMBL BM606459             [CTGCAGGCGGCAAGGTCTCCCGATTCGCACGTGTGTACGTGTGGTTGCGATCGATCACGTACAGGGTGGTGACGGGCTCAAACTGGCATCTCTTCGGGCTAATGATCGTGCATAGGCTCGTGCACGTTCTATGTAGCGGTGCGAATGATTGTTGGCAATAATACCATTCTAGATGTTGTAGGCTGGTATGATTACTCATCACTTTAACCATTGCTAATGGGTAATAACGACCAACGAGGTACGTTTATTATCAGCAAATCATTGTGAAGGTTAAAGCACTAGAGGAGTTGAAATATTCGCCTTGGATTTAATCATTCTAATGGGAAATGTAAAACCTGCTGTATGTATACAATCCAACAAGCTGTTAAGAAAATAAGGATCTCTAAATGGTTCCATAATT]




>consensus_8739#4
CTGCAGGCGGCAAGGTCTCCCGATTCGCACGTGTGTACGTGTGGTTGCGATCGATCACGT
ACAGGGTGGTGACGGGCTCAAACTGGCATCTCTTCGGGCTAATGATCGTGCATAGGCTCG
TGCACGTTCTATGTAGCGGTGCGAATGATTGTTGGCAATAATACCATTCTAGATGTTGTA
GGCTGGTATGATTACTCATCACTTTAACCATTGCTAATGGGTAATAACGACCAACGAGGT
ACGTTTATTATCAGCAAATCATTGTGAAGGTTAAAGCACTAGAGGAGTTGAAATATTCGC
CTTGGATTTAATCATTCTAATGGGAAATGTAAAACCTGCTGTATGTATACAATCCAACAA
GCTGTTAAGAAAATAAGGATCTCTAAATGGTTCCATAATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8739#0      CATGCTGCCCTTTTTTTTNTTTTTTTACCTTTTTATGATTTACAATTTTATTACGTATTT 60
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      AACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTCCTAAGAA 120
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      AGAAGCCATTCCATTTGAATTATCTAAATTATATTCTTATCAAAGTTCATACGCACGCTA 180
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      CCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTAATCGAAATT 240
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      CAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGCCATTTCCTG 300
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      TACTCATTTTCACGATCTCCTCACGCAAGCCCTTGGTGGCTGTTTAGTCGAGCCGGCTAG 360
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      ACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTTCTGATGGTGCTGTTGCTCCT 420
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      CGTGCGCGTAGGACAGTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCCAGCAGCG 480
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      --------------------------------------------------AATTTTATTA 10
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      TTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAG--TTGCT-- 536
consensus_8739#3      -----------------------------------------GCGANTTNGAGCTTGCT-- 17
consensus_8739#2      ----------------------------------GCTCAACCTGCTTCGCAATCAGCCGC 26
consensus_8739#1      CGTATTTAACAGTAGTTTAATTTGAGAATATGAACAAAAACTCAAGTGAATCTTAGGTTC 70
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      TCGAACGCGGAACCATTCGC-TTCAT------TTTGT-TGCGCCA-TAGTACCGGTTT-- 585
consensus_8739#3      TCGAACGCGGAACCATTCGCCTTCATC---TCTTCGT-TGCGCCACTAGTACCGGTTT-- 71
consensus_8739#2      TCACTCGCGGACAGATCCTCGAACGTTGCGTCCTCGT-TGAATGCGTCGCGCAGATCG-- 83
consensus_8739#1      CTAAGAAAGAAGCCATTC-CATTTGAATTATCTAAAT-TATATTCTTATCAAAGTTCATA 128
consensus_8739#4      CTGCAGGCGGCAAGGTCTCCCGATTCG-----CACGTGTGTACGTGTGGTTGCGATCGAT 55
                              *      *   *                * *       *      * *    

consensus_8739#0      -G-AT----TCATCGCATGAGCTT-TGACTTT----CACTCGA----CTGCTTCCTGC-- 628
consensus_8739#3      -G-AT----TCATCGCATGAGCTT-TGACTTT----CACTCGA----CTGCTTCCTGC-- 114
consensus_8739#2      -GGAC----TCTGCAGAATGCGTT-CGATTTCGGCACACTCGC----CTGTTTGACGTCG 133
consensus_8739#1      CGCACGCTACCATCTGATGACACTACTCTTTTATAACACTGTATACTCTACGTATCACTA 188
consensus_8739#4      CACGTACAGGGTGGTGACGGGCTCAAACTGGCATCTCTTCGGG----CTAATGATCGT-- 109
                                      *                   *          **           

consensus_8739#0      ATTAGCTCCCGGAGACTTCCCTGTCAGCGTTCTCTGCTGATCA--GCTACGATGCTTTTT 686
consensus_8739#3      ATTAGCTCCCGGAGACTTACCTGTCAGCGTTCTCTGCTGATCA--GCTACGATGCTTTTT 172
consensus_8739#2      GTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACCGTCCCATGCTGCACTGCACACG 193
consensus_8739#1      ATCGAAATTCAGCAACCTCCTAACAAACATTTCCCGTACTAATTGATTGCCTTTCCCTGC 248
consensus_8739#4      GCATAGGCTCGTGCACGTTCTATGTAGCGGTGCGAATGATTGTTGGCAATAATACCATTC 169
                               *               *                          * *     

consensus_8739#0      TCG-ATCCGTTCGCATAGTT-GACTGTGCGCATGCAA---CACCTCCAGCAG---TACGT 738
consensus_8739#3      TCG-ATCCGTTCGCATAGTT-GACTGTGCGCATGCAA---CACCTCCAGCAG---TACGT 224
consensus_8739#2      GTGCAGGCGGGTACGCGATT-CGGCCAGCGTGTCCAGGTTCACCTCCGGCAGAGTTGCGT 252
consensus_8739#1      CATTTCCTGTACTCATTTTCACGATCTCCTCACGCAA----GCCCTTGGTGG----CTGT 300
consensus_8739#4      TAGATGTTGTAGGCTGGTATGATTACTCATCACTTTAAC-CATTGCTAATGGG--TAATA 226
                              *    *                                     *        

consensus_8739#0      CCAACCGTT-CGGTAACGGCACGCTG--CTGCACCT-GCACATAGCGCTCAAC--CTGCT 792
consensus_8739#3      CCAACCGTT-CGGTAACGGCACGCTG--CTGCACCT-GCACATAGCGCTCAAC--CTGCT 278
consensus_8739#2      CCGGCCGTAGCCGTACCAGCTCGTCCATCTGCTTCTCGTACGTCACGCGCAGC--CGGTA 310
consensus_8739#1      TTAGTCGAGCCGGCTA-GACTCGCTGACCACTAACCGATGCCATATCTTCGACATCTGGA 359
consensus_8739#4      ACGACCAACGAGGTAC--GTTTATTA-TCAGCAAATCATTGTGAAGGTTAAAGCACTAGA 283
                           *      *               *                          *    

consensus_8739#0      TCGCAATCAGCCGC--TCACTCG---CGGACAGATCCTC-------GAACGTTGC---GT 837
consensus_8739#3      TCGCAATCAGCCGC--TCACTCG---CGGACAGATCCTC-------GAACGTTGC---GT 323
consensus_8739#2      CTGGTGGTGGTGGTGGTGTCGCG---CAGGAAGGTGCTTACGATTGGGGAGCTGCCCAGT 367
consensus_8739#1      GTGAAAGAAAGATTTACGAAACATTTCCAACGGTTAGTAGGGCTGGGGGCGAGGCAGGCC 419
consensus_8739#4      GGAGTTGAAATATTCGCCTTGGATT-TAATCATTCTAATGGGAAATGTAAAACCTGCTGT 342
                                                                    *             

consensus_8739#0      CCTCGTTGAATGCGTC--GCGCAGATCGG----GACTCTGCAGAATGCGTTCGATTTCGG 891
consensus_8739#3      CCTCGTTGAATGCGTC--GCGCAGATCGG----GACTCTGCAGAATGCGTTCGATTTCGG 377
consensus_8739#2      ACCGGGTGGA-GCGAC--ACGATGATCAGCC--AGGTCTGCAAACCGCGC-CGCCGTTCT 421
consensus_8739#1      GCCGATCGACTGTGATCGACACTACTGAGTGCAAGCGTTACCTTCTGATGGTGCTGTTGC 479
consensus_8739#4      ATGTATACAATCCAACAAGCTGTTAAGAAAATAAGGATCTCTAAATGGTTCCATAATT-- 400
                                         *                    *     *         *   

consensus_8739#0      CACACTCGCCTGTTTGACGTCGGTTATGGCCCAGGCGTCGATCGAACAGTTGCTTCAACC 951
consensus_8739#3      CACACTCGCCTGTT-GACGTCGGTTATGGCCCAGGCGTCGATCGAAC--------CCATC 428
consensus_8739#2      TCCAGGAGCGAGTCCAACATCAGCTGCTTCGGTGGCAGTGCTGGAAGGAGTAG--CAGGT 479
consensus_8739#1      TCCTCGTGCGCGTAGGACA---GTAGTATCGAAGGCAACGACTGCAGATAGCGCTCCGCC 536
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      -GTCCCATGCTGCACTGCACACGGTGCAGACGGGTACGCGATTCGGCCAGTGTGTCCAGG 1010
consensus_8739#3      -GTGCCGAATTCTGC--------------------------------------------- 442
consensus_8739#2      -TTTACATTTCCCATTAGAATGATTAAATCCAAGGCGAATATTTCAACTCCTCTAGT--- 535
consensus_8739#1      AGCAGCGTTTCCGCCTGGGCACAGCTGAACGCAAACGCAGAACGACGCGCGAGTTGAGTT 596
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      TCTACCTCCGGCAGAGTTGCGTCCGGCCGTAGCCGTACCAGTTCGTCCATCTGCTTCTCG 1070
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      GCTTCGAACGCGGAACCATTCGCTTCATTTTGTTGCGCCATA------------------ 638
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      TACGTCACGCGCAGCCGGTACTGGTGGTCGTTGGTGGTGTCGCGCAGGAAGGTGCTTACG 1130
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      ATTGGGGAGCTGCCCAGTACCGGGTGGAGCGACACGATGATCAGCCAGGTCTGCAAACCG 1190
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      CGCCGCCGTTCTTCCAGGAGCGAGTCCAGCATCAGCTGCTTCGGTGGCAGTGCTGGAAGG 1250
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      AGTCGATATGGATACTTCTCCGCCAGATAGCGATGGAGTGTGACGAAATCTTTGTACCGG 1310
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      CGGCGGACCGTCTTCTCGATGCCCTTCAGCTTGATCTCATACTCCGAGTGCTTGAGGAAG 1370
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      AGTCCTTTTTTCTCCGGCACAATCAGCACGCTAACGGGCGACTCGTTCAGCTCCCGTTCC 1430
consensus_8739#3      ------------------------------------------------------------
consensus_8739#2      ------------------------------------------------------------
consensus_8739#1      ------------------------------------------------------------
consensus_8739#4      ------------------------------------------------------------
                                                                                  

consensus_8739#0      GTCGAGTCATCGCCTGCAATTAGTGTA 1457
consensus_8739#3      ---------------------------
consensus_8739#2      ---------------------------
consensus_8739#1      ---------------------------
consensus_8739#4      ---------------------------