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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8750#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1912 fasta sequence
[GAATCCCCCGAGGTTTGAATCAAAGCTCTGTCAGCTGAAAAGAGCATCTATTGCATAGAAAAGTTTCAACGTGTACAATAAATCGCTATCACGTGTCAGTGAACAACCAAATAAGCAGCGTTTCAGT-AAAACAGACAGTGAACCAG-CCCTACCAAA-ATGAGTCCAGAAGTCATAAGTGAACCGAG-CAACGGCATCCT-GGACAGGGTGGTGAAGTTTTTCGTAGAAAATCAAGATG-AGCGCACGAAGGAGTGGTTCCTG-TCCGGTTCCATCACGCCGCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGCCAAG-CGGAAGCCCTTCAAGCTGGAG-GGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCAGC-ATC-GT-GCTAGTGTA-TG--AA-GGAATTGAGGGCGGATGGAGGAAACACTACAACTACTCCTG--CCAACCCGTGGACTACAGCCCAAACCCGGTTGCAATGAGG-ATGGCTCGTGCCGTTTGGATGTACTACA-TGTGCAAGGTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCGTTCCTGCACGTCTACCACCACACCCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCTGTTGGGCGTCATCAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCAGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGTTCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGCGCACCGCCGGCAAGGCGGGCGAGGAAAACAACAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAGGCGAACACGCGGCCAGCCGTCGAGGCTAAGAAGGCGCTGTAGGCTAGCACAATACGTATAATAATCTCTCTTCGTCTTGCGTGTGCGTGCGCGCGCGAGCGTAACCTGCTTGTACTGTTCGGAGGCAAGGGTGCAAGCATACACCAGGGCAGGGCGCACGGTGGAGCAGAGCTGGCGGAACAACCCGGAACAACAGTCGGCGGTACACGGAAGGGATCCAAAGAAATGAATGGGAGAAAGGAGGTGTGGGAGTTGTGAATGCTAAACAAGATGCACGTCCAACCCGCAACAGCTCCTAATTCGGCAAGCTCCGAAAAGCTCGCAGGAGTTTGTTAGAGTGTAGGATAAAAAAAGAAGAAGAAGAGGAAGAAGAAAGACAAAATGAATGCCTTGGATGATCATCGGCAGAATATCTGTTGCGCGAAACTACATCGCAAAGTGAACAACAACATCGTGCTCATACAAAACACCGGCCACTCCACAAATCCCCGCAGTCCGTGCCTTTCGTGATCTCAAGATGCTTGATGTAACATCCCTCGACGACGTTTTGGGGCAGACGTTTGGTGAGAGCTGGGAGAAAGTGATCTCGAGCTTTCGCGAGCATCTGCAACACATATGGGCAGCTTCTGATACCTCCGATACAGTGTGTATGCGTGTGTGCGTGCGTGTGTGTGCGTGTGTCCTTGGGTAACTGGTTGTGTTTTTGCTTGCCTCAAAGCCTCCATTCCAAACCGAAGTTTAGTCCTTCCGGGAGCAGTGTATTGTTTTTTTTTTGTCGTATACTATGTTTAGCTGAAGCCGACGCGTGCGAGATGTACATTTTTTTTTGCCTAGATTATTTAATTTAAACACGGAAATGAGAAAC]
[+] EMBL AL929634 [GAATCCCCCGAGGTTTGAATCAAAGCTCTGTCAGCTGAAAAGAGCATCTATTGCATAGAAAAGTTTCAACGTGTACAATAAATCGCTATCACGTGTCAGTGAACAACCAAATAAGCAGCGTTTCAGT AAAACAGACAGTGAACCAGANCCTACCAAATATGAGTCCAGAAGTCATAAGTGAACCGAGTCAACGGCATCCTGGGACAGGGTGGTGAAGTTTTTCGAAGANAATCAAGATGTAGCGCACGAAGGAGTGGTTCCTGTTCCGGTTCCATCACGCCGCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGGCAAGNCGGAAGCCCTTCAAGCTGGAGAGGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCACCGATCTGTCGCTANTGTATTG AACGGAATTGAGGGCGGATGGAGGAAACACTACAATTACTCCTGATCGAACCCGTGGACTACAGCGCAAAGCCGGTTGCAATGAGGCATGGCTCGTGCCGTTTGGATGTACTACAGTGTGCAAGG ]
[+] EMBL AL929615 [ atgtaaanTTCAACGTGTACAATAAATCGCTATCACGTGTCAGTGAACAA CAAAT AGCAGCGTTTCAGTAAAAACAGACAGTGAACCAG CCCTA CAAA ATGAGTCCAGAAGT ]
[+] EMBL BX618317 [ TTTCAGT AAAAGAGACAGTGAACCAG CCCTACCAAA ATGAGTCCAGACGTCATAAGTGAACCGAG CAACGGCATCCT GGACAGGGTGGTGAAGTTTTTCGTAGAAAATCAAGATG AGCGCACGAAGGAGTGGTTCCTG TCCGGTTCCATCACGCCGCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGCCAAG CGGAAGCCCTTCAAGCTGGAG GGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCAGC ATC GT GCTAGTGTA TG AA GGAATTGAGGGCGGATGGAGGAAACACTACAACTACTCCTG CCAACCCGTGGACTACAGCCCGAACCCGGTTGCAATG ]
[+] EMBL BX604755 [ CTACCAAA ATGAGTCCAGACGTCATAAGTGAACCGAG CAACGGCATCCT GGACAGGGTGGTGAAGTTTTTCGTAGAAAATCAAGATG AGCGCACGAAGGAGTGGTTCCTG TCCGGTTCCATCACGCCGCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGCCAAG CGGAAGCCCTTCAAGCTGGAG GGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCAGC ATC GT GCTAGTGTA TG AA GGAATTGAGGGCGGATGGAGGAAACACTACAACTACTCCTG CCAACCCGTGGACTACAGCCGAAACCCGGTTGCAATGAGG ATGGCTCGTGCCGTTTGGATGTACTACA TGTGCAAGGTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCGTTCCTGCACGTCTACCACCACACCCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCTGTTGGGCGTCATCAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGG ]
[+] EMBL BX623447 [ GCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGCCAAG CGGAAGCCCTTCAAGCTGGAG GGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCAGC ATC GT GCTAGTGAT TGAAAA GGAATTGAGGGCGGATGGAGGAAACACTACAACTACTCCTG CCAACCCGTGGACTACAGCCGAAACCCGGTTGCAATGAGG ATGGCTCGTGCCGTTTGGATGTACTACA TGTGCAAGGTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCGTTCCTGCACGTCTACCACCACACCCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCTGTTGGGCGTCATCAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCAGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGTTCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGCGCACCGCCGGCAAGGCGGGCGANGAAAACAACAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAn ]
[+] EMBL BX621588 [ CAGAACCAGGTTTCGTTCCTGCACGTCTACCACCACACCCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCTGTTGGGCGTCATCAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCAGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGTTCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGCGCACCGCCGGCAAGGCGGGCGAGGAAAACAACAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAGGCGAACACGCGGCCAGCCGTCGAGGCTAAGAAGGCGCTGTAGGCTAGCACAATACGTATAATAATCTCTCTTCGTCTTGCGTGTGCGTGCGCGCGCGAGCGTAACCTGCTTGTACTGTTCGGAGGCAAGGGTGCAAGCATACACCAGGGCAGGGCGCACGGTGGAGCAGAGCTGGCGGAACAACCCGGAACAACAGTCGGCGGTACACGGAAGGGATCCAAAGAAATGAATGGGAGAAAGGANGTGTGGGAGTTGTGAATGCTAAACAAGATGCACGTCCAACCCGCAACAGCTCCTAATTCGGCAAGCTCCGAAAAGCTCGCANGAG ]
[+] EMBL BX622533 [ CACACCCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCTGTTGGGCGTCATCAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCAGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGTTCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGCGCACCGCCGGCAAGGCGGGCGAGGAAAACAACAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAGGCGAACACGCGGCCAGCCGTCGAGGCTAAGAAGGCGCTGTAGGCTAGCACAATACGTATAATAATCTCTCTTCGTCTTGCGTGTGCGTGCGCGCGCGAGCGTAACCTGCTTGTACTGTTCGGAGGCAAGGGTGCAAGCATACACCAGGGCAGGGCGCACGGTGGAGCAGAGCTGGCGGAACAACCCGGAACAACAGTCGGCGGTACACGGAAGGGATCCAAAGAAATGAATGGGAGAAAGGAGGTGTGGGAGTTGTGAATGCTAAACAAGATGCACGTCCAACCCGC ACAGCTCCTAATTCGGCAAGCTCCGAAAAGCTCGCAGGAGTTT ]
[-] EMBL BM642472 [ GGGCGCACGGTGGAGCAGAGCTGGCGGAACAACCCGGAACAACAGTCGGCGGTACACGGAAGGGATCCAAAGAAATGAATGGGAGAAAGGAGGTGTGGGAGTTGTGAATGCTAAACAAGATTCACGTTCAACCCGCAACAGCTCCTAATTCGGCAAGCTCCGAAAAGCTCGCCGGAGTTTGTTAGAGTGTAGGATAAAAAAAGAAGAAGAAGAGGAAGAAGAAAGACAAAATGAATGCCTTGGATGATCATCGGCAGAATATCTGTTGCGCGAAACTACATCGCAAAGTGAACAACAACATCGTGCTCATACAAAACACCGG ]
[+] EMBL BX618989 [ AACAAGATGCACGTTCAACCCGCAACAGCTCCTAATTCGGCAAGCTCCGAAAAGCTCGCAGGAGTTTGTTAGAGTGTAGGATAAAAAAAGAAGAGGAA GAAGAAGAAAGACAAAATGAATGCCTGGGATGATCATCGGCAGAATATCTGTTGCGCAATACTACATCGCAAAGTCAACAACACCATCGTGCACATACAAAACACATTCCACTCCACAAATCCCCGCAGTCCGTGCCTTTCGTGATCTCAAGATGCTTGATGTAACATCCCTCGACGACGTTTTGGGGCAGACGTTTGGTGAGAGCTGGGAGAAAGTGATCTCGAGCTTTCGCGAGCATCTGCAACACATATGGGCAGCTTCTGATACCTCCGATACAGTGTGTATGCGTGTGTGCGTGCGTGTGTGTGCGTGTGTCCTTGGGTAACTGGTTGTGTTTTTGCTTGCCTCAAAGCCTCCATTCCAAACCGAAGTTTAGTCCTTCCGGGAGCAGTGTATTGTTTTTTTTTTGTCGTATACTATGTTTAGCTGAAGCCGACGCGTGCGAGATGTACATTTTTTTTTGCCTAGATTATTTAATTTAAACACGGAAATGAGAAAC]
consensusID : consensus_8750#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1404 fasta sequence
[CAGATCCCCCGAGGTTTATCCACGTTCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCTGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCATGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCTGTTCATCTACATGTTCAGCTCGTTCTACGTTGCACTCGTACATCCTGCCAATGTCGAACTGTGTGCGGCACCCTGCAGGCTGCAACCTGGCGTGCCAAATGTGGCTGGGCGAGGAAAAAACAAACAACCAGGTTTGTGAAATTGCAAAACCAAAATGNGACTGGCCCTGTCGGATGTGGCNGAACACTGCGGGCCCATGGCCGTCGAGGGCTTAACGAAGGCCGCTGTACGTGCTTAGGCCACAAATACGGTATACATAACATCTTCTCTATCGTCTTGCCGTTGTTGCCAGTTGCGCGGCTGGCGANGCGGTAAACCTTGCTTTGTTACTGTTCCGTGACTCGCAAACGTGTGGTTGCAAATGGCATTACAACCCAGAGGGCCAGGTNGCCGGCCACGTGTGTGANGCCACGCANGCCTTGGGCCGGGACACCAAACACCCGTGGACACAAACCACGTTCNGGCANGGATATANCNAACCGGTGAACATGCGGNGAATTCCCTANACTGATANTNNAACNCACATTTGTACACTTGGTCGNGCACGCAACACGCTGCANGCGCGCTTGGCTTTGGCGCANCGGCTTCATGGTTGGACANTTTGCCTTAAGATAGCCAGAAGGACTTGCAACCTGTCCTATATACCCCGGTTCAANGACANGCANTTCCCCGTTAAAANTTTTCGNGCCAAAANAAGGANACCTTCCCCTGGCAANAAAGACANAACGGTGCCNTTTCCGNGTCNAAAGTAGGAACAGNTTTCTCTTGGCATTAGTNCACNGCAAACGGGTANGGNNTACAGACGGGACGCTTTAACACTCNNACTNAACTACTAGACCNTAGCATACACTCGAATCGAGTACACCAANGTAGTGCCTCAATTTGGGTTATCGGTCCGGGCGNCCCCCGAGGTAGACANATGGCCNTTATATCAACTTNCCCCCCNCCAGTTTATTATAGAGTANGAANGNNGGGNAGCTCCAACAGCTTAGTACAAGCCCCNATNGGTGTGCCCACCCAGTAGGTNGCCCCAGGCANACCAGACTTNACATAAAACCCAGACAACCCGAGTACCTGCTAGCAACCCANTNGGNTNAAGAAAAAATCCNCCCACTTCGACGAGNGGCATTAAACCNGCCACAACGTCGTATTAANAGNAAGNCCGTGCGCGTAGATTNAGATCGA]
[+] EMBL AL695037 [CAGATCCCCCGAGGTTTATCCACGTTCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCTGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCATGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCTGTTCATCTACATGTTCAGCTCGTTCTACGTTGCACTCGTACATCCTGCCAATGTCGAACTGTGTGCGGCACCCTGCAGGCTGCAACCTGGCGTGCCAAATGTGGCTGGGCGAGGAAAAAACAAACAACCAGGTTTGTGAAATTGCAAAACCAAAATGNGACTGGCCCTGTCGGATGTGGCNGAACACTGCGGGCCCATGGCCGTCGAGGGCTTAACGAAGGCCGCTGTACGTGCTTAGGCCACAAATACGGTATACATAACATCTTCTCTATCGTCTTGCCGTTGTTGCCAGTTGCGCGGCTGGCGANGCGGTAAACCTTGCTTTGTTACTGTTCCGTGACTCGCAAACGTGTGGTTGCAAATGGCATTACAACCCAGAGGGCCAGGTNGCCGGCCACGTGTGTGANGCCACGCANGCCTTGGGCCGGGACACCAAACACCCGTGGACACAAACCACGTTCNGGCANGGATATANCNAACCGGTGAACATGCGGNGAATTCCCTANACTGATANTNNAACNCACATTTGTACACTTGGTCGNGCACGCAACACGCTGCANGCGCGCTTGGCTTTGGCGCANCGGCTTCATGGTTGGACANTTTGCCTTAAGATAGCCAGAAGGACTTGCAACCTGTCCTATATACCCCGGTTCAANGACANGCANTTCCCCGTTAAAANTTTTCGNGCCAAAANAAGGANACCTTCCCCTGGCAANAAAGACANAACGGTGCCNTTTCCGNGTCNAAAGTAGGAACAGNTTTCTCTTGGCATTAGTNCACNGCAAACGGGTANGGNNTACAGACGGGACGCTTTAACACTCNNACTNAACTACTAGACCNTAGCATACACTCGAATCGAGTACACCAANGTAGTGCCTCAATTTGGGTTATCGGTCCGGGCGNCCCCCGAGGTAGACANATGGCCNTTATATCAACTTNCCCCCCNCCAGTTTATTATAGAGTANGAANGNNGGGNAGCTCCAACAGCTTAGTACAAGCCCCNATNGGTGTGCCCACCCAGTAGGTNGCCCCAGGCANACCAGACTTNACATAAAACCCAGACAACCCGAGTACCTGCTAGCAACCCANTNGGNTNAAGAAAAAATCCNCCCACTTCGACGAGNGGCATTAAACCNGCCACAACGTCGTATTAANAGNAAGNCCGTGCGCGTAGATTNAGATCGA]
consensusID : consensus_8750#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 780 fasta sequence
[AGGCAGAATCGGCACGATTGGACAAAATGAGTCCAGAAGTCATAAGTGAACCGAGCAACGGCATCCTGGACAGGGTGGTGAAGTTTTTCGAAGAAAATCAAGATGAGCGCACGAAGGAGTGGTTCCTGTCCGGTTCCATCACGCCGCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGCCAAGCGGAAGCCCTTCAAGCTGGAGGGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCAGCATCGTGCTAGTGTATGAAGGAATTGAGGGCGGATGGAGGAAACACTACAACTACTCCTGCCAACCCGTGGACTACAGCCGAAACCCGGTTGCAATGAGGATGGCTCGTGCCGTTTGGATGTACTACATGTGCAAGGTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCGTTCCTGCACGTCTACCACCGACACACCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCGTGTTAGGGCGTCATCAACGTCGTTCATCCACGGTGTGCATGTACNGCGGTACTACATGCTGGGCCGCGATGGGACCGAAAGGTTCAAAAGTACCTGTGGNTGGAAGCGTTAACCTTGGACCGTGAATGGCAGGATCCGTGCAGTTCATCATTGTGGTACTTTGCAANAGCGGNGCCACGGTGNCAGGTTGCAAGCCGGAACCTGCGGGTAACCGGAAAGTCCAAT]
[+] EMBL BX468421 [AGGCAGAATCGGCACGATTGGACAAAATGAGTCCAGAAGTCATAAGTGAACCGAGCAACGGCATCCTGGACAGGGTGGTGAAGTTTTTCGAAGAAAATCAAGATGAGCGCACGAAGGAGTGGTTCCTGTCCGGTTCCATCACGCCGCTGATCATGATCCTCGTCACGTACCTGTACTTCTGCCTGTACGCTGGACCCCGGTACATGGCCAAGCGGAAGCCCTTCAAGCTGGAGGGTGTGCTGATCGCGTACAACGCGGTACAGGTGCTGCTCAGCATCGTGCTAGTGTATGAAGGAATTGAGGGCGGATGGAGGAAACACTACAACTACTCCTGCCAACCCGTGGACTACAGCCGAAACCCGGTTGCAATGAGGATGGCTCGTGCCGTTTGGATGTACTACATGTGCAAGGTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCGTTCCTGCACGTCTACCACCGACACACCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGTACTTTGCCGGAGGTCACGGTACGCGTGTTAGGGCGTCATCAACGTCGTTCATCCACGGTGTGCATGTACNGCGGTACTACATGCTGGGCCGCGATGGGACCGAAAGGTTCAAAAGTACCTGTGGNTGGAAGCGTTAACCTTGGACCGTGAATGGCAGGATCCGTGCAGTTCATCATTGTGGTACTTTGCAANAGCGGNGCCACGGTGNCAGGTTGCAAGCCGGAACCTGCGGGTAACCGGAAAGTCCAAT]
consensusID : consensus_8750#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[AGATCCGCACGAGTGTAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCAGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGTTCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGGCACCGCGGCAAGGCGGGCGAGGAAAACAAGCAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAGGCGAACACGCGGCCAGCCGTCGAGGCTAAGAAGGCGCTGTAGGCTAGCACAATACGTATAATAATCTCTCTTCGTCTTGCGTGTGCGTGCGCGCGCGAGNCGTAACCTGCTTGTACTGTTCGGAGGCNAGGGTGCAAGCATACACCAGGGCAGGGCGCACGGTGGGAGCA]
[+] EMBL BX466105 [AGATCCGCACGAGTGTAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGGCCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGCAGATCGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCAGCCGACCTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGTTCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGGCACCGCGGCAAGGCGGGCGAGGAAAACAAGCAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAGGCGAACACGCGGCCAGCCGTCGAGGCTAAGAAGGCGCTGTAGGCTAGCACAATACGTATAATAATCTCTCTTCGTCTTGCGTGTGCGTGCGCGCGCGAGNCGTAACCTGCTTGTACTGTTCGGAGGCNAGGGTGCAAGCATACACCAGGGCAGGGCGCACGGTGGGAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8750#1 CAGATCC-CCCGAG--------GTTTATCCACGT--TCATGTACGCGTACTACATGCTGG 49
consensus_8750#3 -AGATCCGCACGAGTGTAACTCGTTCATCCACGTGTGCATGTACGCGTACTACATGCTGG 59
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 CCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGC 109
consensus_8750#3 CCGCGATGGGACCGAAGGTTCAAAAGTACCTGTGGTGGAAGCGTTACCTGACCGTGATGC 119
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 AGATCTGTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCATGCCGAC 169
consensus_8750#3 AGATC-GTGCAGTTCATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCA-GCCGAC 177
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 CTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGC-TGTTCATCTA 228
consensus_8750#3 CTGCGGCTACCCGAAATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTA 237
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 CATGTTCAGCTCGTTCTACGTTGCACTCGTACATCCTGCCAATGTCGAACTGTGTGCGGC 288
consensus_8750#3 CATGTTCAGCTCGTTCTACGT-GCACTCGTACATCC-GCAA--GTCGAACGGTG--CGGC 291
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ACCCTGCAGGCTGCAACCTGGCGTGCCAAATGTGGCTGGGCGAGGAAAAAACAAACAACC 348
consensus_8750#3 ACC--GCAGGC--------ACCGCGGCAA-----GGCGGGCGAGGAAAA--CAAGCAACC 334
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 AGGTTTGTGAAATTGCAAAACCAAAATGNGACTGGCCCTGTCGGATGTGGCNGAACACTG 408
consensus_8750#3 AGTT-----GGAATGCAAA-CCAAAGGACG-------CCGTCGA-----GGCGAACAC-G 375
consensus_8750#0 ------------------------------------------------------------
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 CGGGCCCATGGCCGTCGAGGGCTTAACGAAGGCCGCTGTACGTGCTTAGGCCACAAATAC 468
consensus_8750#3 CGGCC----AGCCGTCGAGG--CTAA-GAAGGC-GCTGTAGG-----------CTAGCAC 416
consensus_8750#0 --------------------------------GAATCCCCCGAGGTTTGAATCAAAGCTC 28
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 GGTATACATAACATCTTCTCTATCGTCTTGCCGTTGTTGCCAGTTGCGCGGCTGGCGANG 528
consensus_8750#3 AATACGTATAATAATCTCTCT-TCGTCTTGCGTGTGCG------TGCGCGC---GCGAGN 466
consensus_8750#0 TGTCAGCTGAAAAGAGCATCTATTGCATAGAAAAGTTTCAACGTGTACAATAAATCGCTA 88
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 CGGTAAACCTTGCTTTGTTACTGTTCCGTGACTCGCAAACGTGTGGTTGCAAATGGCATT 588
consensus_8750#3 CG-TAA--CCTGCTTG--TACTGTTCGGAG----GCNAGGGTGCAA--GCATACACCAGG 515
consensus_8750#0 TCACGTGTCAGTGAACAACCAAATAAGCAGCGTTTCAGTAAAACAG--ACAGTGAACCAG 146
consensus_8750#2 ----------------------------------------AGGCAG--A--ATCGGCACG 16
*
consensus_8750#1 ACAACCCAGA--GGGCCAGGTNGCCGGCCACGTGTGTGANGCCACGCANGCCTTGGGCCG 646
consensus_8750#3 GCAGGGCGCA--CGGTGGGAGCA------------------------------------- 536
consensus_8750#0 CCCTACCAAAATGAGTCCAGAAGTCA--TAAGTGAACCGAGCAACGGCATCCT--GGACA 202
consensus_8750#2 ATTGGACAAAATGAGTCCAGAAGTCA--TAAGTGAACCGAGCAACGGCATCCT--GGACA 72
* * *
consensus_8750#1 GGACACCAAACACCCGTGGACACAAACCACGTTCNGGCANGGATATANCNAACCGGTGAA 706
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 GGGTGGTGAAGTTTTTCGTAGAAAATCAAGATGAGCGCACGAAGGAGTGGTTCCTGTCCG 262
consensus_8750#2 GGGTGGTGAAGTTTTTCGAAGAAAATCAAGATGAGCGCACGAAGGAGTGGTTCCTGTCCG 132
consensus_8750#1 CATGCGGNGAATTCCCTANACTGATANTNNAACNCACATTTGTACACTTGGTCGNGCACG 766
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 GTTCCATCACGCCGCTGATCATGAT-CCTCGTCACGTACCTGTACTTCTG--CCTGTACG 319
consensus_8750#2 GTTCCATCACGCCGCTGATCATGAT-CCTCGTCACGTACCTGTACTTCTG--CCTGTACG 189
consensus_8750#1 CAACACGCTGCANGCGCGCTTGGCTTTGGCGCANCGGCTTCATGGTTGGACANTTTGCCT 826
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 CTGGACCCCG-----GTACATGGCCA-AGCGGAAGCCCTTCA-AGCTGGAGGGTGTGCT- 371
consensus_8750#2 CTGGACCCCG-----GTACATGGCCA-AGCGGAAGCCCTTCA-AGCTGGAGGGTGTGCT- 241
consensus_8750#1 TAAGATAGCCAGAAGGACTTGCAACCTGTCCTATATACCCCGGTTCAANGACANGCANTT 886
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 ---GATCGC--GTACAACGCGGTACAGGTGCTGCTCAGCATCGTGCTAGTGTATGAAGG- 425
consensus_8750#2 ---GATCGC--GTACAACGCGGTACAGGTGCTGCTCAGCATCGTGCTAGTGTATGAAGG- 295
consensus_8750#1 CCCCGTTAAAANTTTTCGNGCCAAAANAAGGANACCTTCCCCTGGCAANAAAGACANAAC 946
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 ---AATTGAGGGCGGATGGA--GGAAACACTACAACTACTCCTGCCAACCCGTGGACTAC 480
consensus_8750#2 ---AATTGAGGGCGGATGGA--GGAAACACTACAACTACTCCTGCCAACCCGTGGACTAC 350
consensus_8750#1 GGTGCCNTTTCCGNGTCNAAAGTAGGAACAGNTTTCTCTTGGCATTAGTNCACN-GCAAA 1005
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 AGCCCAAACCCGGTTGCAATGAGGATGGCTCGTGCCGTTTGGATGTACTACATGTGCAAG 540
consensus_8750#2 AGCCGAAACCCGGTTGCAATGAGGATGGCTCGTGCCGTTTGGATGTACTACATGTGCAAG 410
consensus_8750#1 CGGGTANGGNNTACAGACGGGACGCT-TTAACACTCNNACTNAACTACTAGACCNTAGCA 1064
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 GTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCG 600
consensus_8750#2 GTCGTGGAGCTGCTCGACACGGTGTTCTTTGTACTGCGGAAGAAACAGAACCAGGTTTCG 470
consensus_8750#1 TACACTCGAATCGAGTAC--ACCAANGTAGTGCCTCAATTTGGGTTATCGGTCCGGGCGN 1122
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 TTCCTGCACGTCTACCACC-ACAC-CCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGT 658
consensus_8750#2 TTCCTGCACGTCTACCACCGACACACCTGATGCCGGTCTGTGGCTTCATTGGCGTCAAGT 530
consensus_8750#1 CCCCCGAGGTAGACANATGGCCNTTATATCAACTTNCCCCCCNC-CAGTTTATTATAGAG 1181
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 ACTTTGCCGGAGGT-CACGGTACGC-TGTT-GGGCGTCATCAAC-TCGTTCATC-CACG- 712
consensus_8750#2 ACTTTGCCGGAGGT-CACGGTACGCGTGTTAGGGCGTCATCAACGTCGTTCATC-CACGG 588
consensus_8750#1 TANGAANGNNGGGNAGCTCCAACAGCTTAGTACAAGCCCCNATNGGTGTGCCCACCCAGT 1241
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 TGTGCATGTACGC--GTACTACATGCT------GG-CCGCGATGGGACCGAA-GGTTCAA 762
consensus_8750#2 TGTGCATGTACNGCGGTACTACATGCT------GGGCCGCGATGGGACCGAAAGGTTCAA 642
consensus_8750#1 AGGTNGCCCCAGGCANACCAGACTTNACATAAAACCCAGACAACCCGAGTACCTGCTAGC 1301
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 AAGTACCTGTGGT-GGA--AGCGTTACCT---GACCGTGAT--GCAGA--TCGTGCAGTT 812
consensus_8750#2 AAGTACCTGTGGNTGGA--AGCGTTAACCTTGGACCGTGAATGGCAGGATCCGTGCAGTT 700
consensus_8750#1 AACCCANTNGGNTNAAGAAAAAATCCNCCCACTTCGACG-AGNGGCATTAAACCNGCCAC 1360
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 CATCATTGTGTTCTTCCACACGGTGCAGGTGCAGTTCCA-GCCGACCTGCGGCTACCCGA 871
consensus_8750#2 CATCATTGTGGTACTT-------TGCAANAGCGGNGCCACGGTGNCAGGTTGCAAGCCGG 753
consensus_8750#1 AACGTCGTATTAANAGN---AAGNCCGTGCGCGTAGATTNAGATCGA------------- 1404
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 AATCCATCGCCGCCCTGCTGACGCTGAACGCCGGCCTGTTCATCTACATGTTCAGCTCGT 931
consensus_8750#2 AACCTGCGGGTAACCGG--AAAGTCCAAT------------------------------- 780
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 TCTACGTGCACTCGTACATCCGCAAGTCGAACGGTGCGGCACCGCAGCGCACCGCCGGCA 991
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 AGGCGGGCGAGGAAAACAACAACCAGTTGGAATGCAAACCAAAGGACGCCGTCGAGGCGA 1051
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 ACACGCGGCCAGCCGTCGAGGCTAAGAAGGCGCTGTAGGCTAGCACAATACGTATAATAA 1111
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 TCTCTCTTCGTCTTGCGTGTGCGTGCGCGCGCGAGCGTAACCTGCTTGTACTGTTCGGAG 1171
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 GCAAGGGTGCAAGCATACACCAGGGCAGGGCGCACGGTGGAGCAGAGCTGGCGGAACAAC 1231
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 CCGGAACAACAGTCGGCGGTACACGGAAGGGATCCAAAGAAATGAATGGGAGAAAGGAGG 1291
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 TGTGGGAGTTGTGAATGCTAAACAAGATGCACGTCCAACCCGCAACAGCTCCTAATTCGG 1351
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 CAAGCTCCGAAAAGCTCGCAGGAGTTTGTTAGAGTGTAGGATAAAAAAAGAAGAAGAAGA 1411
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 GGAAGAAGAAAGACAAAATGAATGCCTTGGATGATCATCGGCAGAATATCTGTTGCGCGA 1471
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 AACTACATCGCAAAGTGAACAACAACATCGTGCTCATACAAAACACCGGCCACTCCACAA 1531
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 ATCCCCGCAGTCCGTGCCTTTCGTGATCTCAAGATGCTTGATGTAACATCCCTCGACGAC 1591
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 GTTTTGGGGCAGACGTTTGGTGAGAGCTGGGAGAAAGTGATCTCGAGCTTTCGCGAGCAT 1651
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 CTGCAACACATATGGGCAGCTTCTGATACCTCCGATACAGTGTGTATGCGTGTGTGCGTG 1711
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 CGTGTGTGTGCGTGTGTCCTTGGGTAACTGGTTGTGTTTTTGCTTGCCTCAAAGCCTCCA 1771
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 TTCCAAACCGAAGTTTAGTCCTTCCGGGAGCAGTGTATTGTTTTTTTTTTGTCGTATACT 1831
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ------------------------------------------------------------
consensus_8750#3 ------------------------------------------------------------
consensus_8750#0 ATGTTTAGCTGAAGCCGACGCGTGCGAGATGTACATTTTTTTTTGCCTAGATTATTTAAT 1891
consensus_8750#2 ------------------------------------------------------------
consensus_8750#1 ---------------------
consensus_8750#3 ---------------------
consensus_8750#0 TTAAACACGGAAATGAGAAAC 1912
consensus_8750#2 ---------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||