cluster # 8758

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Anopheles gambiae
cluster # 8758 cluster # 8758 Sequences # 12 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8758#0 length = 1178 sequences # 7
consensus_8758#1 length = 671 sequences # 1
consensus_8758#2 length = 596 sequences # 1

consensus_8758#3 length = 521 sequences # 1
consensus_8758#4 length = 450 sequences # 1
consensus_8758#5 length = 386 sequences # 1

consensusID : consensus_8758#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1178
fasta sequence

                              [CCGGCCGCGACCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTACGGGGGTGGC-TTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGGTTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAGGAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATCCCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGGCGAGAGTGGAAAACAGTGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCC-GGCCCATGCT-GGGCCTTCGACGTTCCGAATGTGCA-TTATACGACGTTGA-CT-GTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCAACTCAGCTAAAAATAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGACATGTCCGGCATCAGATGTACGTTCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGACATCAGCCGGTACTTCTACATTGCCTCCAAGTTTATCGAGAA--T-GGCA-TCAATAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTAAAACGCGGGGGATCTG]

[+] EMBL BM648737             [CCGGCCGCGACCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTACGGGGGTGGC TTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGGTTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAGGAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATCCCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGGCGAGAGTGGAAAACAGTGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCC GGGCCATGCT GGGCCTTCGACGTTCCGAATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM638380             [    CCGCGACCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTACGGGGGTGGC TTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGGTTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAGGAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATCCCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM597339             [    CCGCGACCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTACGGGGGTGGCTTTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGGTTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAGGAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATCCCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGGCGAGAGTGGAAAACAGTGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCC GGCCCATGCT GGGCCTTCGACGTTCCGAATGTGCA TTATACGACGTTGA CT GTGATGAAGTCTATCCACGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM647920             [        ccgCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTACGGGGGTGGC TTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGGTTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAGGAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATCCCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGGCGAGAGTGGAAAACAGTGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCC GGCCCATGCTGGGGCCTTCGACGTTCCGAATGTGCATTTATACGACGTTGACCTGGTGATGAAGTCTATCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM621513             [            ccgGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTACGGGGGTGGC TTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGGTTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAGGAAAAAAAACAGGTGTTTTCTCGCTTCACAAAACAGCGCGAAACTATTTCGTGTCAAATCCCAATTGTGTCACGTAGTGTATTGGATCGTTCTCAGTGTGTGTTGGTGTGTATTTAAAATTGCAATCGAAATTTGAGGTGAAAGGTTCAGCCTGCCGAGAGTGGAAAACAGTGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCGAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGGCCCATGCTGGGGCCTTCGACGTTCCGAATGTGCA TTATACGACGTTGA CT GTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCAACTCAGCTAAAAATAAACAGTATTTGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM652059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCC GGCCCATGCT GGGCCTTCGACGTTCCGAATGTGCA TTATACGACGTTGA CT GTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCAACTCAGCTAAAAATAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGACATGTCCGGCATCAGATGTACGTTCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGACATCAGCCGGTACTTCTACATTGCCTCCAAGTTTATCGAGAA  T GGCA TCAATAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTAAAACG           ]
[-] EMBL AL929647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGCTTTCCGATGATTGACCAGCCGACGACGGACATCAGCCGGTACTTCTACATTGCCTCCAAGTTTATCGAGAAATTGGGTATTCAACAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCGTACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCC ACGCTTCAGGAAGAAAT ATGCCGA TATA TAATCTAAACCTCGGGGGATCTG]




>consensus_8758#0
CCGGCCGCGACCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTAC
GGGGGTGGCTTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGG
TTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAG
GAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATC
CCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAAT
TGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGGCGAGAGTGGAAAACAGTGAAAAGTA
AAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGC
GTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGA
TACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGG
CAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGCCCATGCTGGGCCTTCGA
CGTTCCGAATGTGCATTATACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTACATT
GGCGATGCCAACTCAGCTAAAAATAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTG
CTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGG
GACATGTCCGGCATCAGATGTACGTTCAGGTATATGGGCTTTCCGATGATTGACCAGCCG
ACGACGGACATCAGCCGGTACTTCTACATTGCCTCCAAGTTTATCGAGAATGGCATCAAT
AGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTG
CTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGA
ATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAAT
GAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAA
TAATGCCGATTATATTAATCTAAAACGCGGGGGATCTG

consensusID : consensus_8758#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGCAAGTTTATCGAGAATGGCATCAATAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACATGGCGCAAACCGAGGCAGCAGCTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTTGTGTGCATGTGTAAACTAATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATGCTATTTTAAACACTTACTGTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGGGTCGTGCTCGTGACATATAGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAAAAAAAATCGAACAGGGGAAGGGAAAATTTTTCTTTCTTGTTGTTGGGGACACTACTCCAACATCCATTCCGAAATACGGGGGAGGGACA]

[+] EMBL BM579751             [CCGCGGACGCGTGGGCGGACGCGTGGGCAAGTTTATCGAGAATGGCATCAATAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACATGGCGCAAACCGAGGCAGCAGCTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTTGTGTGCATGTGTAAACTAATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATGCTATTTTAAACACTTACTGTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGGGTCGTGCTCGTGACATATAGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAAAAAAAATCGAACAGGGGAAGGGAAAATTTTTCTTTCTTGTTGTTGGGGACACTACTCCAACATCCATTCCGAAATACGGGGGAGGGACA]




>consensus_8758#1
CCGCGGACGCGTGGGCGGACGCGTGGGCAAGTTTATCGAGAATGGCATCAATAGTGGAGG
TAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATA
CCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCCGAATGCATCG
GGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAA
GCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCG
ATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACATGGCGCAAACCGAGGCAGCAG
CTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTTGTGTGCATGTGTAAACTA
ATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATGCTATTTTAAACACTTACT
GTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGGGTCGTGCTCGTGACATAT
AGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAAAAAAAATCGAACAGGGGA
AGGGAAAATTTTTCTTTCTTGTTGTTGGGGACACTACTCCAACATCCATTCCGAAATACG
GGGGAGGGACA

consensusID : consensus_8758#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 596
fasta sequence

                              [CCGAGGTTACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGCCCATGCTGGGCCTTCGACGTTCCGAATGTGCATTATACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGACATGTCCGGCATCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGACAT]

[+] EMBL AL693132             [CCGAGGTTACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGCCCATGCTGGGCCTTCGACGTTCCGAATGTGCATTATACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGACATGTCCGGCATCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGACAT]




>consensus_8758#2
CCGAGGTTACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAATTGC
AATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTAAAA
GAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTT
CAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATAC
GCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGGCAGGCAG
CTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGCCCATGCTGGGCCTTCGACGT
TCCGAATGTGCATTATACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTACATTGGC
GATGCCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTG
AACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGAC
ATGTCCGGCATCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGACAT

consensusID : consensus_8758#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 521
fasta sequence

                              [CCCACGCGTCCGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGGCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACATGGCGCAAACCGAGGCAGCAGCTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTTGTGTGCATGTGTAAACTAATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATGCTATTTTAAACACTTACTGTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGGGTCGTGCTCGTGACATATAGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAAAAAAAATCGAACA]

[+] EMBL BM632462             [CCCACGCGTCCGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGGCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACATGGCGCAAACCGAGGCAGCAGCTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTTGTGTGCATGTGTAAACTAATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATGCTATTTTAAACACTTACTGTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGGGTCGTGCTCGTGACATATAGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAAAAAAAATCGAACA]




>consensus_8758#3
CCCACGCGTCCGGCATGTCCCGTTCGGCGACCTGCGTGCTGGCATACCTCATGATCGCCC
GCAAGATGACCGCCGCCGAGGCGATCCGCACCGGCCGAATGCATCGGGACATTCGCCCGA
ACGAGGGCTTCCTCCAGCAGCTGGCCGATCTGGACAATGAGCTGAAGCGTGACCGGTTGT
ACTATTGACTCGAGTGTGGCCAACGCTTCAGGAAGAAATAATGCCGATTATATTAATCTA
AACGTGTGGGGGTAAAAAAAAAACATGGCGCAAACCGAGGCAGCAGCTCTAACCCAACAG
CAGAACAACACACACCCATCATGTGTTTGTGTGCATGTGTAAACTAATACTCTCTAACTC
ATCCAATCACATGAACAACAAAACAATGCTATTTTAAACACTTACTGTGCAGGCGTACGT
AATGGATGCTCGGTTGAAGGTTTCCAGGGTCGTGCTCGTGACATATAGATGGCAGCTCTA
GTCGGCAGGCAATATTGTGATGTAGAAAAAAAAATCGAACA

consensusID : consensus_8758#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [CCCCCAGGTTGATGCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGACATGTCCGGCATCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGAGCATCANGCGATACTTACTACATTGCCTCCAAGTTTATCGNAGAACTGGCATCAATAGTGNAGGTAANGACNTTGGNGCCANTGTATGCATAGAGTGATTGTCCCTGATGTCGGNNGTAACGTGGCCGTGCTGGGNCTGGTATCGTACATGCAATCGNCCCGTCACAGGATAACCGCGCTGCCTGAGGTAGATCCATGATCGTCCCGGAATGTCGATCGGCGACCATACGGGACCGCAGACACNGGGCNAATGTCNCTAGGAACTTGN]

[+] EMBL AL694825             [CCCCCAGGTTGATGCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACGCACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTACTACCGGGACATGTCCGGCATCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACGGAGCATCANGCGATACTTACTACATTGCCTCCAAGTTTATCGNAGAACTGGCATCAATAGTGNAGGTAANGACNTTGGNGCCANTGTATGCATAGAGTGATTGTCCCTGATGTCGGNNGTAACGTGGCCGTGCTGGGNCTGGTATCGTACATGCAATCGNCCCGTCACAGGATAACCGCGCTGCCTGAGGTAGATCCATGATCGTCCCGGAATGTCGATCGGCGACCATACGGGACCGCAGACACNGGGCNAATGTCNCTAGGAACTTGN]




>consensus_8758#4
CCCCCAGGTTGATGCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACG
CACGTGCTGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCTAC
TACCGGGACATGTCCGGCATCAGGTATATGGGCTTTCCGATGATTGACCAGCCGACGACG
GAGCATCANGCGATACTTACTACATTGCCTCCAAGTTTATCGNAGAACTGGCATCAATAG
TGNAGGTAANGACNTTGGNGCCANTGTATGCATAGAGTGATTGTCCCTGATGTCGGNNGT
AACGTGGCCGTGCTGGGNCTGGTATCGTACATGCAATCGNCCCGTCACAGGATAACCGCG
CTGCCTGAGGTAGATCCATGATCGTCCCGGAATGTCGATCGGCGACCATACGGGACCGCA
GACACNGGGCNAATGTCNCTAGGAACTTGN

consensusID : consensus_8758#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 386
fasta sequence

                              [GTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCNACTCAGCTAAAAACNAACAGTATTTGCNGCTGATCNGTGTAACGCACGTGCTGAACACGGCGGAAGNACTCGC]

[+] EMBL BX627656             [GTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAATTGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTAAAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAGTGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCGTATCTGACACACTACCGTAACAACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTACATTGGCGATGCCNACTCAGCTAAAAACNAACAGTATTTGCNGCTGATCNGTGTAACGCACGTGCTGAACACGGCGGAAGNACTCGC]




>consensus_8758#5
GTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAATTGCAAT
CGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTAAAAGAA
AACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGCGTTCAG
TGATTTCGGGCATCGATTAAACAACAGCTACGACCACACAAAATGTCCTGGAGATACGCG
TATCTGACACACTACCGTAACAACGACGTTGACTGTGATGAAGTCTATCCACGGCTGTAC
ATTGGCGATGCCNACTCAGCTAAAAACNAACAGTATTTGCNGCTGATCNGTGTAACGCAC
GTGCTGAACACGGCGGAAGNACTCGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      CCGGCCGCGACCGTTGCAGCACGTGTCTCGATACTCCGGGCAGCAGATATCGCTTTGTAC 60
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      GGGGGTGGCTTTTTTTCGCACAAACTTCCCATTTCCCATTTGCACCGTGCAGTGGAACGG 120
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      TTTTGGAATAGAGTTTTACATTTGAGAAAGAAAATTTAGAATCGTTTATAGATCGAACAG 180
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      GAAAAAAAACAGGTGTTTTCTCGCTTTACAAAACAGCGCGAAACTATTTCGTGTCAAATC 240
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ---------CCGCGGACGCGTGGGCGGACGCGTGGGCAAGTTTATCGAGAATGGCATCAA 51
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ---CCGAGGTTACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAAT 57
consensus_8758#5      ------GTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGATGTGTATTTAAAAT 54
consensus_8758#0      CCAATTGTGTCACGTAGTGTATTGGATCGTGCTCAGTGTGTGTTGGTGTGTATTTAAAAT 300
consensus_8758#4      CCCCCAGGTTGATGCAACTCAGCTAAAAACAAACAGTATTTGCGGCTGATCGGTGTAACG 60
consensus_8758#1      TAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGACCTG-CG 110
consensus_8758#3      -----------------------CCCACGCGTCCGGCATGTCCCGTTCGGCGACCTG-CG 36
                                                         *  * *   * *             

consensus_8758#2      TGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTA 117
consensus_8758#5      TGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGCCCAGAGTGGAAAACAGAGAAAAGTA 114
consensus_8758#0      TGCAATCGAAATTTGGGGTGAAAGGTTCAGCCTGGCGAGAGTGGAAAACAGTGAAAAGTA 360
consensus_8758#4      CACGTGCTGAACACGG--CGGAAGGT---ACTCGCTTCG---GGCAGGTGGATACGGGCC 112
consensus_8758#1      TGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGTCC 170
consensus_8758#3      TGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCACCGGCC 96
                        *   *  *              *             *    *         *      

consensus_8758#2      AAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGC 177
consensus_8758#5      AAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGC 174
consensus_8758#0      AAAGAAAACAACCAAACACAACCTCCGTTACCTCTTTCGGGTTTATTAAACGGCTAAAGC 420
consensus_8758#4      ACAGCTACTACCGGGACATGTCCGGCATCAGGTATATGGGCTTTCC--GATGATTGAC-C 169
consensus_8758#1      GAAT---GCATCGGGACATTCGCCCGAACGAGGGCTTC--CTCCAGCAGCTGGCCGATCT 225
consensus_8758#3      GAAT---GCATCGGGACATTCGCCCGAACGAGGGCTTC--CTCCAGCAGCTGGCCGATCT 151
                        *      * *   ***    *             *    *         *    *   

consensus_8758#2      GTTCAGTGATTTCGGGCAT---CGATTAAA-CAACAGCTACGACCACACAAAATGTCCTG 233
consensus_8758#5      GTTCAGTGATTTCGGGCAT---CGATTAAA-CAACAGCTACGACCACACAAAATGTCCTG 230
consensus_8758#0      GTTCAGTGATTTCGGGCAT---CGATTAAA-CAACAGCTACGACCACACAAAATGTCCTG 476
consensus_8758#4      AGCCGACGACG--GAGCAT---C-ANGCGA-TACTTACTACATTGCCTCCAAGTTTATCG 222
consensus_8758#1      GGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAG 285
consensus_8758#3      GGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCAG 211
                         *   **      ** *   *      *  *    **         * **   *   *

consensus_8758#2      GAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGG 293
consensus_8758#5      GAGATACGCGTATCTGACACACTACCGTAACAACGAC----------------------- 267
consensus_8758#0      GAGATACGCGTATCTGACACACTACCGTAACAACGACAAGATGGCAGAACAAACGACCGG 536
consensus_8758#4      NAGA-ACTGGCATCAATAGTGNAG--GTAANGACNTTGGNGCCANTGTA----------- 268
consensus_8758#1      GAAGAAATAATGCCGATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACA---TGG 342
consensus_8758#3      GAAGAAATAATGCCGATTATATTAATCTAAACGTGTGGGGGTAAAAAAAAAACA---TGG 268
                       *   *       *             ***                              

consensus_8758#2      CAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGCCCATGCTGGGCCT 353
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      CAGGCAGCTACAGCGGATCCTGCACTACTCCGTCACACCGTGCCGGCCCATGCTGGGCCT 596
consensus_8758#4      --------TGCATAGAGTGATTGTCCCTGATGTCGGNNGTAACGTGGCCGTGCTGGGNCT 320
consensus_8758#1      CGCAAACCGAGGCAGCAGCTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTT 402
consensus_8758#3      CGCAAACCGAGGCAGCAGCTCTAACCCAACAGCAGAACAACACACACCCATCATGTGTTT 328
                                                                                  

consensus_8758#2      TCGACGTTCCGAATGTGCATTATACGACGTTGACTGTGATGAAGTCTATCCACGGCTGT- 412
consensus_8758#5      ----------------------------GTTGACTGTGATGAAGTCTATCCACGGCTGT- 298
consensus_8758#0      TCGACGTTCCGAATGTGCATTATACGACGTTGACTGTGATGAAGTCTATCCACGGCTGT- 655
consensus_8758#4      G-------------GTATCGTACATGCAATCGNCC-CGTCACAGGATAACCGCG-CTGC- 364
consensus_8758#1      GTGTGCATGTGTAAACTAATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATG 462
consensus_8758#3      GTGTGCATGTGTAAACTAATACTCTCTAACTCATCCAATCACATGAACAACAAAACAATG 388
                                                                *       *    *    

consensus_8758#2      ACATTGGCGATGCCAACTCAGCTAA-AAACAAACAGTATTTGCGGCTGATCGGTGTAACG 471
consensus_8758#5      ACATTGGCGATGCCNACTCAGCTAA-AAACNAACAGTATTTGCNGCTGATCNGTGTAACG 357
consensus_8758#0      ACATTGGCGATGCCAACTCAGCTAA-AAATAAACAGTATTTGCGGCTGATCGGTGTAACG 714
consensus_8758#4      CTGAGGTAGATCCATGATCGTCCCG-GAATGTCGA---TCGGCGACCATACGGGACCGCA 420
consensus_8758#1      CTATTTTAAACACTTACTGTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGG 522
consensus_8758#3      CTATTTTAAACACTTACTGTGCAGGCGTACGTAATGGATGCTCGGTTGAAGGTTTCCAGG 448
                               *  *    *   *      *         *   *                 

consensus_8758#2      CACGTGC--TGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCT 529
consensus_8758#5      CACGTGC--TGAACACGGCGGAAGN-ACTCGC---------------------------- 386
consensus_8758#0      CACGTGC--TGAACACGGCGGAAGGTACTCGCTTCGGGCAGGTGGATACGGGCCACAGCT 772
consensus_8758#4      GACACNG--GGCNAATGTCNCTAGGAACTTGN---------------------------- 450
consensus_8758#1      GTCGTGCTCGTGACATATAGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAA 582
consensus_8758#3      GTCGTGCTCGTGACATATAGATGGCAGCTCTAGTCGGCAGGCAATATTGTGATGTAGAAA 508
                        *           *        *   **                               

consensus_8758#2      ACTACCGGGACATGTCCGGCATCAG------------GTATATGGGCTTTCCGATGATTG 577
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      ACTACCGGGACATGTCCGGCATCAGATGTACGTTCAGGTATATGGGCTTTCCGATGATTG 832
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      AAAAAATCGAACAGGGGAAGGGAAAATTTTTCTTTCTTGTTGTTGGGGACACTACTCCAA 642
consensus_8758#3      AAAAAATCGAACA----------------------------------------------- 521
                                                                                  

consensus_8758#2      ACCAGCCGACGACGGACAT----------------------------------------- 596
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      ACCAGCCGACGACGGACATCAGCCGGTACTTCTACATTGCCTCCAAGTTTATCGAGAATG 892
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      CATCCATTCCGAAATACGGGGGAGGGACA------------------------------- 671
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      GCATCAATAGTGGAGGTAAGGTCCTTGTGCACTGTATGATGGGCATGTCCCGTTCGGCGA 952
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      CCTGCGTGCTGGCATACCTCATGATCGCCCGCAAGATGACCGCCGCCGAGGCGATCCGCA 1012
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      CCGTCCGAATGCATCGGGACATTCGCCCGAACGAGGGCTTCCTCCAGCAGCTGGCCGATC 1072
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ------------------------------------------------------------
consensus_8758#5      ------------------------------------------------------------
consensus_8758#0      TGGACAATGAGCTGAAGCGTGACCGGTTGTACTATTGACTCGAGTGTGGCCAACGCTTCA 1132
consensus_8758#4      ------------------------------------------------------------
consensus_8758#1      ------------------------------------------------------------
consensus_8758#3      ------------------------------------------------------------
                                                                                  

consensus_8758#2      ----------------------------------------------
consensus_8758#5      ----------------------------------------------
consensus_8758#0      GGAAGAAATAATGCCGATTATATTAATCTAAAACGCGGGGGATCTG 1178
consensus_8758#4      ----------------------------------------------
consensus_8758#1      ----------------------------------------------
consensus_8758#3      ----------------------------------------------