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Anopheles gambiae
cluster # 8764 cluster # 8764       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8764#0 length = 1979 sequences # 8  
consensus_8764#1 length = 1187 sequences # 3  
consensus_8764#2 length = 629 sequences # 1  

consensusID : consensus_8764#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1979
fasta sequence
                              [CCGAGTTGCCACACATCGCACAGCGGCAAAACCGACGGCATCCGCGAGCTCAGAAAGATCCCGTACACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTCTGTTTCTAATCGTCCTCACTGTTCCGTCGATCATCCTCCTCAAGTGTTTCCGCGGTTGCGTGTATCGTGT--TGTGTGTGTGTGCGCGCTTGGCGTTTCCGCGACG-TTTTTTTTGTGACGTTTTCGTGTGTGCGCTCAAGTCCGGGAAGCGATGCTGTCGCGTGTGTGCGTATTCACGGGTACGGGTTACGATTCACACCTGCAGCTGTAAGT---AGCAGCAGCAGCAGCAGTACGGTGATCCGGTGGATTGGTGTGTGGTATTCGCGACAGTACCGCGAGCAGCAGCAGTTGGTGATTTCCTAAAGATAAGAAGTCTCCCCTTATTGCGTGCGTGTGTATGTGTGGTTCTTATCGGCCACAGTGAACCCAGAGATATCTGCGACCTAAACCGTTCAAAAGTGCAAATCGAAAAGTGCCTCCAACCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGACGACAGAGGAAGCAAAAAAAAAGTCCGTCTGTGTGTGAGTCGGGGCCTACTGCGTGGGCAACACACAAAAAAGGTGCTCAGTGTCCCGTCCGTCCCTCCAATCCAGTGAAGATAAAGTGTAAAATTCATATACGAGCGCGCGTGTGTATGTGTGTGTAAGTGTGCGACGTGTGGTATTTGTCTCGTGCGCTCACATCTGTTCCGTAATAAATAGAAAAAGTAGGCGGAAAACACCGGGAAAATCATTCTGTGTGGAAACGCAACCGAGAGCGGGCCGAAAATGCCCAAGTTTTATCGCACCCGAGATCAACAAAACGGAATGGGAAGTTCCGGAAAAGTATCAGGTGTTGACCCCCGGTCGGTAGCGGCGCGTACGGCCAAGTGTGCTCGGCCATGGACACGGAGCACAACGTGAAGGTGGCAATCAAGAAGCTGGCCCGCCCATTCCAGTCAGCCGTCCACGCGAAGCGCACCTACCGGGAGCTGCGCATGCTGAAGCACATGAACCACGAGAACATTATCGGCCTGCTGGACGTGTTCCATCCGGGGGCCAACAATACGCTCGAATCGTTCCAGCAGGTCTACCTGGTGACGCACCTGATGGGCGCCGACCTGAACAACATCATCCGCACCCAGCGCCTGTCGGACGAGCATGTCCAGTTCCTCGTCTACCAGATCCTGCGCGGCCTGAAGTACATACACAGTGCGGGAATCATTCACCGGGATTTGAAGCCGTCCAACATTGCCGTGAACGAGGACTGCGAGCTGAAAATACTGGACTTTGGGTTGGNCCGCCCGACCGAGAACGAGATGACCGGCTACGTCGCGACCCGCTGGTACCGGGCGCCCGAAATTATGCTCAACTGGATGCACTACAACCAAACGGTGGACATTTGGTCGGTCGGCTGCATCATGGCGGAGCTGCTGACCGGCCGGACACTGTTCCCCGGCACGGACCACATTCACCAGCTAAACCTTATCATGGAGATACTCGGCACACCGAACGATGAGTTCATGGCGAAAATCTCCTCGGAAAGTGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAG]

[+] EMBL BM653158             [CCGAGTTGCCACACATCGCACAGCGGCAAAACCGACGGCATCCGCGAGCTCAGAAAGATCCCGTACACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTCTGTTTCTAATCGTCCTCACTGTTCCGTCGATCATCCTCCTCAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM585982             [                            ccgCCGACGGCATCCTCGAGCTCAGAAAGATCCCGTACACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTCTGTTTCTAATCGTCCTCACTGTTCCGTCGATCATCCTCCTCAAGTGTTTCCGCGGTTGCGTGTATCGTGT  TGTGTGTGTGTGCGCGCTTGGCGTTTCCGCGACGTTTTTTTTTGTGACGTTTTCGTGTGTGCGCTCAAGTCCGGGAAGCGATGCTGTCGCGTGTGTGCGTATTCACGGGTACGGGTTACGATTCACACCTGCAGCTGTAAGT   AGCAGCAGCAGCAGCAGTACGGTGATCCGGTGGATTGGTGTGTGGTATTCGCGACAGTACCGCGAGCAGCAGCAGTTGGTGATTTCCTAAAGATAAGAAGTCTCCCCTTATTGCGTGCGTGTGTATGTGTGGTTCTTATCGGCCACAGTGAACCCAGAGATATCTGCGACCTAAACCGTTCAAAAGTGCAAATCGAAAAGTGCCTCCAACCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM657480             [                                  cCGGCATCCGCGAGCTCAGAAAGATCCCGTACACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTCTGTTTCTAGTCGTCCTCACTGTTCTGTCGATCTTCCTCCTCAAGTGTTTCCGCGGTTGCGTGTATCGTGTTGTGTGTGTGTGTGCGCGCTTGGCGTTTCCGCGACG   TTTTTTGTGACGTTTTCGTGTGTGCGCTCGAGTCCGGGAAGCGATGCTGTCGCGTGTGTGCGTATTCACGGGTACGGGTTACGATTCACACCTGCAGCTGTAAGTAGCAGCAGCAGCAGCAGCAGTAAGGTGATCCGGTGGATTGGTGTGTGGTATTCGCGACAGTACCGCGAGCAGCAGCAGTTGGTGATTTCGTAAAGATAAGAAGTCTCCCCTTATTGCGTGCGTGTGTATGTGTGGTTCTTATCGGCCACAGTGAACCCAGAGATATCTGCGACCTAAACCGTTCAAAAGTGCAAATCGAAAAGTGCCTCCAACCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGACGACAGAGGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM593978             [                                                              ccgCACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTCTGTTTCTAATCGTCCTCACTGTTCCGTCGATCATCCTCCTCAAGTGTTTCCGCGGTTGCGTGTATCGTGT  TGTGTGTGTGTGCGCGCTTGGCGTTTCCGCGACG TTTTTTTTGTGACGTTTTCGTGTGTGCGCTCAAGTCCGGGAAGCGATGCTGTCGCGTGTGTGCGTATTCACGGGTACGGGTTACGATTCACACCTGCAGCTGTAAGT   AGCAGCAGCAGCAGCAGTACGGTGATCCGGTGGATTGGTGTGTGGTATTCGCGACAGTACCGCGAGCAGCAGCAGTTGGTGATTTCCTAAAGATAAGAAGTCTCCCCTTATTGCGTGCGTGTGTATGTGTGGTTCTTATCGGCCACAGTGAACCCAGAGATATCTGCGACCTAAACCGTTCAAAAGTGCAAATCGAAAAGTGCCTCCAACCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGACGACAGAGGAAGCAAAAAAAAAGTCCGTCTGTGTGTGAGTCGGGGCCTACTGCGTGGGCAACACACAAAAAAGGTGCTCAGTGTCCCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM646721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgGCAAATCGAAAAGTGCCTCCAACCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGACGACAGAGGAAGCAAAAAAAAAGTCCGTCTGTGTGTGAGTCGGGGCCTACTGCGTGGGCAACACACAAAAAAGGTGCTCAGTGTCCCGTCCGTCCCTCCAATCCAGTGAAGATAAAGTGTAAAATTCATATACGAGCGCGCGTGTGTATGTGTGTGTAAGTGTGCGACGTGTGGTATTTGTCTCGTGCGCTCACATCTGTTCCGTAATAAATAGAAAAAGTAGGCGGAAAACACCGGGAAAATCATTCTGTGTGGAAACGCAACCGAGAGCGGGCCGAAAATGCCCAAGTTTTATCGCACCCGAGATCAACAAAACGGAATGGGAAGTTCCGGAAAAGTATCAGGTGTTGACCCCCGGTCGGTAGCGGCGCGTACGGCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX623045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTGGGCAACACACAAAAAAGGTGCTCAGTGTCCCGTCCGTCCCTCCAATCCAGTGAAGATAAAGTGTAAAATTCATATACGAGCGCGCGTGTGTATGTGTGTGTAAGTGTGCGACGTGTGGTATTTGTCTCGTGCGCTCACATCTGTTCCGTAATAAATAGAAAAAGTAGGCGGAAAACACCGGGAAAATCATTCTGTGTGGAAACGCAACCGAGAGCGGCCCGAAAATGCCCAAGTTTTATCGCA CCGAGATCAACAAAACGGAATGGGAAGTTCCGGAAAAGTATCAGGTGTTGA CCCCGGTCGGTAGCGGCGCGTACGGCCAAGTGTGCTCGGCCATGGACACGGAGCACAACGTGAAGGTGGCAATCAAGAAGCTGGCCCGCCCATTCCAGTCAGCCGTCCACGCGAAGCGCACCTACCGGGAGCTGCGCATGCTGAAGCACATGAACCACGAGAACATTATCGGCCTGCTGGACGTGTTCCATCCGGGGGCCAACAATACGCTCGAATCGTTCCAGCAGGTCTACCTGGTGACGCACCTGATGGGCGCCGACCTGAACAACATCATCCGCACCCAGCGCCTGTCGGACGAGCATGTCCAGTTCCTCGTCTACCAGATCCTGCGCGGCCTGAAGTACATACACAGTGCGGGAATCATTCACCGGGATTTGAAGCCGTCCAACATTGCCGTGAACGAGGACTGCGAGCTGAAAATACTGGACTTTGGGTTGGNCCGCCCGACCGAGAACGAGATGACCGGCTACGTCGCGACCCGCTGGTACCGGGCGCCCGAAATTATGCTCAACTGGATGCACTACAACC AACGGTGGACTTTTGGTCGGTCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX624636             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGGATTTGAAGCCGTCCAACATTGCCGTGAACGAGGACTGCGAGCTGAAAATACTGGACTTTGGGTTGGCCCGCCCGACCGAGAACGAGATGACCGGCTACGTCGCGACCCGCTGGTACCGGGCGCCCGAAATTATGCTCAACTGGATGCACTACAACCAAACGGTGGACATTTGGTCGGTCGGCTGCATCATGGCGGAGCTGCTGACCGGCCGGACACTGTTCCCCGGCACGGACCACATTCACCAGCTAAACCTTATCATGGAGATACTCGGCACACCGAACGATGAGTTCATGGCGAAAATCTCCTCGGAAAGTGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAG]
[+] EMBL BM600255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGCTCAACTGGATGCACTACAACCAAACGGTGGACATTTGGTCGGTCGGCTGCATCATGGCGGAGCTGCTGACCGGCCGGACACTGTTCCCCGGCACGGACCACATTCACCAGCTAAACCTTATCATGGAGATACTCGGCACACCGAACGATGAGTTCATGGCGAAAATCTCCTCGGAAAGTGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCA                                                               ]


>consensus_8764#0 CCGAGTTGCCACACATCGCACAGCGGCAAAACCGACGGCATCCGCGAGCTCAGAAAGATC CCGTACACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTC TGTTTCTAATCGTCCTCACTGTTCCGTCGATCATCCTCCTCAAGTGTTTCCGCGGTTGCG TGTATCGTGTTGTGTGTGTGTGCGCGCTTGGCGTTTCCGCGACGTTTTTTTTGTGACGTT TTCGTGTGTGCGCTCAAGTCCGGGAAGCGATGCTGTCGCGTGTGTGCGTATTCACGGGTA CGGGTTACGATTCACACCTGCAGCTGTAAGTAGCAGCAGCAGCAGCAGTACGGTGATCCG GTGGATTGGTGTGTGGTATTCGCGACAGTACCGCGAGCAGCAGCAGTTGGTGATTTCCTA AAGATAAGAAGTCTCCCCTTATTGCGTGCGTGTGTATGTGTGGTTCTTATCGGCCACAGT GAACCCAGAGATATCTGCGACCTAAACCGTTCAAAAGTGCAAATCGAAAAGTGCCTCCAA CCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGACGACAGAGGAAGCAAAAAAAAA GTCCGTCTGTGTGTGAGTCGGGGCCTACTGCGTGGGCAACACACAAAAAAGGTGCTCAGT GTCCCGTCCGTCCCTCCAATCCAGTGAAGATAAAGTGTAAAATTCATATACGAGCGCGCG TGTGTATGTGTGTGTAAGTGTGCGACGTGTGGTATTTGTCTCGTGCGCTCACATCTGTTC CGTAATAAATAGAAAAAGTAGGCGGAAAACACCGGGAAAATCATTCTGTGTGGAAACGCA ACCGAGAGCGGGCCGAAAATGCCCAAGTTTTATCGCACCCGAGATCAACAAAACGGAATG GGAAGTTCCGGAAAAGTATCAGGTGTTGACCCCCGGTCGGTAGCGGCGCGTACGGCCAAG TGTGCTCGGCCATGGACACGGAGCACAACGTGAAGGTGGCAATCAAGAAGCTGGCCCGCC CATTCCAGTCAGCCGTCCACGCGAAGCGCACCTACCGGGAGCTGCGCATGCTGAAGCACA TGAACCACGAGAACATTATCGGCCTGCTGGACGTGTTCCATCCGGGGGCCAACAATACGC TCGAATCGTTCCAGCAGGTCTACCTGGTGACGCACCTGATGGGCGCCGACCTGAACAACA TCATCCGCACCCAGCGCCTGTCGGACGAGCATGTCCAGTTCCTCGTCTACCAGATCCTGC GCGGCCTGAAGTACATACACAGTGCGGGAATCATTCACCGGGATTTGAAGCCGTCCAACA TTGCCGTGAACGAGGACTGCGAGCTGAAAATACTGGACTTTGGGTTGGNCCGCCCGACCG AGAACGAGATGACCGGCTACGTCGCGACCCGCTGGTACCGGGCGCCCGAAATTATGCTCA ACTGGATGCACTACAACCAAACGGTGGACATTTGGTCGGTCGGCTGCATCATGGCGGAGC TGCTGACCGGCCGGACACTGTTCCCCGGCACGGACCACATTCACCAGCTAAACCTTATCA TGGAGATACTCGGCACACCGAACGATGAGTTCATGGCGAAAATCTCCTCGGAAAGTGCCC GTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCG GTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGC GGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCG ACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAAC GGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATA TTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAG



consensusID : consensus_8764#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1187
fasta sequence
                              [GATCGCGAAAGGTTTATTAGGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAGCTGCAGCGAAGGCAAAACGGGAATGTTCTGACCACCACATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAGACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTAAATTACTGAATGCGTACTACAAGCTGACTAAGAAGCTAGGTTTGAGTATGGCAGTCTCTATTGAGCACATGTATGCAGGGTTCACTTTTATAAATTTCTTCATAAACATTGTGCAATTGCGTAAAACGCTTGCCTTCTGGTGATGTGTGGTGGTGTGTTGTGTGTGGTGCAAAAGACGAAAAGAGCTAGTACGGGTAGCAGCAAGAGAACACGTAGCCTCTAGATGCACAAATTGACGTGCACAAGTCCCTGTGTGTATGTGCGTGGTGTGTGATGCAACAGCTAAATACGAACGTTTCTCCTCTGTTTAAACACCAACTAGTAAAGTAAGCGAATGCGATAGACATGAGTGAAGATGGAAGCTAGCAAAAGCAAAGGGAATGTAAAATCCACCCTACAAAATCAGAACTTAGATCCTTGCTCACTCCCCCACAGGACACATACCCCGTCCGTGGTGGGGTGTGTGTTTCAAGCTTTACTGTTGATGCAACAACAACAACAACAACAACAAAATTATGAGTTAGATTCAATGTTAATATACGTACGCGATAAATGGGTATGAGGTTCAAGGTGTAGTATATGCACGGTACGCTGGAATGAGTAATGGCGGGAAAGAGTCGTTAGAGTCGAAAGTGTACTTCAAGTAGTAAAAAAACGATAACAACAAACTTAT]

[-] EMBL BX620666             [GATCGCGAAAGGTTTATTAGGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAGCTGCAGCGAAGGCAAAACGGGAATGTTCTGACCACCACATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAGACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTAAATTACTGAATGCGTACTACAAGCTGACTAAGAAGCTAGGTTTGAGTATGGCAGTCTCTATTGAGCACATGTATGCAGGGTTCACTTTTATAAATTTCTTCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM585070             [                                                                                                                                                                                                                                                                                                                                                                                                 ccgGCGAAGGTAAAACGGGAATGTTCTGACCACCACATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAGACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTGAATTACTGAATGCGTACTAAATGCTGACTAAGAAGCTAGGTTCGAGAATGGCAGTCTCTATTGAGCACATGTATGCAGGGTTCACTTTTATAAATTTCTTCATAAACATTGTGCAATTGCGTAAAACGCTTGCCTTCTGGTGATGTGTGGTGGTGTGTTGTGTGTGGTGCAAAAGACGAAAAGAGCTAGTACGGGTAGCAGCAAGAGAACACGTAGCCTCTAGATGCACAAATTGACGTGCACAAGTCCCTGTGTGTATGTGCGTGGTGTGTGATGCAACAGCTAAATACGAACGTTTCTCCTCTGTTTAAACACCAACTAGTAAAGTAAGCGAATGCGATAGACATGAGTGAAGATGGAAGCTAGCAAAAGCAAAGGGAATGTAAAATCCACCCTACAAAATCAGAACTTAGATCCTTGCTCACTCCCCCACAGGACACATACCCCGTCCGTGGTGGGGTGTGTGTTTCAAGCTTTACTGTTGATGCAACAACAACAACAACAACAACAAAATTAT                                                                                                                                                            ]
[+] EMBL BM615511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccgTAAACATTGTGCAATTGCGTAAAACGCTTGCCTTCTGCTGATGTGTGGTGGTGTGTTGTGTGTGGTGCAAAAGACGAAAAGAGCTAGTACGGGTAGCAGCAAGAGAACACGTAGCCTCTAGATGCACAAATTGACGTGCACAAGTCCCTGTGTGTATGTGCGTGGTGTGTGATGCAACAGCTAAATACGAAAGTTTCTCCTCTGTTTAAACACCAACTAGTAAAGTAAGCAAATGCGACAGACATGAGTGAAGATGGAAGCTAGCAAAAGCAAAGGGAATGTAAAATCCACCCTACAAAATCAGAACTTAGATCCTTGCTCACTCCCTCACAGGACACATACCCCGTCCGT GT GTGTGTGTGTTTCAAGCTTTACTGTTGATGCCACAACAACAACAAAATTATTACAATTTCGAGTTAGATTCAATGTTAATATACGTACGCGATAAATGGGTATGAGGTTCAAGGTGTAGTATATGCACGGTACGCTGGAATGAGTAATGGCGGGAAAGAGTCGTTAGAGTCGAAAGTGTACTTCAAGTAGTAAAAAAACGATAACAACAAACTTAT]


>consensus_8764#1 GATCGCGAAAGGTTTATTAGGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGC GCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAA TGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATT TGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCG AGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACT TTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGA TCAATCAGTAAAAGCCCAACTAGCTGCAGCGAAGGCAAAACGGGAATGTTCTGACCACCA CATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAG ACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTAAATTACTGAATGCGTACTACAAGCTG ACTAAGAAGCTAGGTTTGAGTATGGCAGTCTCTATTGAGCACATGTATGCAGGGTTCACT TTTATAAATTTCTTCATAAACATTGTGCAATTGCGTAAAACGCTTGCCTTCTGGTGATGT GTGGTGGTGTGTTGTGTGTGGTGCAAAAGACGAAAAGAGCTAGTACGGGTAGCAGCAAGA GAACACGTAGCCTCTAGATGCACAAATTGACGTGCACAAGTCCCTGTGTGTATGTGCGTG GTGTGTGATGCAACAGCTAAATACGAACGTTTCTCCTCTGTTTAAACACCAACTAGTAAA GTAAGCGAATGCGATAGACATGAGTGAAGATGGAAGCTAGCAAAAGCAAAGGGAATGTAA AATCCACCCTACAAAATCAGAACTTAGATCCTTGCTCACTCCCCCACAGGACACATACCC CGTCCGTGGTGGGGTGTGTGTTTCAAGCTTTACTGTTGATGCAACAACAACAACAACAAC AACAAAATTATGAGTTAGATTCAATGTTAATATACGTACGCGATAAATGGGTATGAGGTT CAAGGTGTAGTATATGCACGGTACGCTGGAATGAGTAATGGCGGGAAAGAGTCGTTAGAG TCGAAAGTGTACTTCAAGTAGTAAAAAAACGATAACAACAAACTTAT



consensusID : consensus_8764#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 629
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAACTGATGCAAAAAATCACCAGCGAAGAGGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAGCTGCAGCGAAGGCAAAACGGGAATGTTCTGACCACCACATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAGACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTAAATTACTGAATGCGTACTACAAGCTGACTAAGAAGCTAGGGTTGGAGTATGGCAG]

[+] EMBL BM592393             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAACTGATGCAAAAAATCACCAGCGAAGAGGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGATCAATCAGTAAAAGCCCAACTAGCTGCAGCGAAGGCAAAACGGGAATGTTCTGACCACCACATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAGACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTAAATTACTGAATGCGTACTACAAGCTGACTAAGAAGCTAGGGTTGGAGTATGGCAG]


>consensus_8764#2 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAACTGATGC AAAAAATCACCAGCGAAGAGGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAAGC GCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAAAA TGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTATT TGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTTCG AGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAACT TTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGAGA TCAATCAGTAAAAGCCCAACTAGCTGCAGCGAAGGCAAAACGGGAATGTTCTGACCACCA CATAATGCAAAATATACACGCGAAAGGACACGCGGTTGTCCATGAAGGGGTCTTATAGAG ACGAAGAAGACAGGAGCGGAGGGCTCAAACAGTAAATTACTGAATGCGTACTACAAGCTG ACTAAGAAGCTAGGGTTGGAGTATGGCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      CCGAGTTGCCACACATCGCACAGCGGCAAAACCGACGGCATCCGCGAGCTCAGAAAGATC 60
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      --------------------------CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGC 34
consensus_8764#0      CCGTACACGGCCAGAGACACACAAAAACGCGTCTCCCCGTTTGTTCGTGCTTAGCTATTC 120
                                                                                  

consensus_8764#1      ---------------------GATCGCGAAAGGTTT------ATTAGGCCCGTCATTACA 33
consensus_8764#2      GTCCGCCCACGCGTCCGAACTGAT-GCAAAAAATCACCAGCGAAGAGGCCCGTCATTACA 93
consensus_8764#0      TGTTTCTAATCGTCCTCACTGTTCCGTCGATCATCCTCCTCAAGTGTTTCCGCGGTTGCG 180
                                               *   *   *        *      ***   ** * 

consensus_8764#1      TAAAATCGCTGCCGAAAACGGAGAAGCGCAAC--TTTAGCGACGTTTTCCGCGGTGCCAA 91
consensus_8764#2      TAAAATCGCTGCCGAAAACGGAGAAGCGCAAC--TTTAGCGACGTTTTCCGCGGTGCCAA 151
consensus_8764#0      TGTATCGTGTTGTGTGTGTGTGCGCGCTTGGCGTTTCCGCGACGTTTTTTTTGTGACGTT 240
                      *  *     *   *     *     **    *  **  **********    *   *   

consensus_8764#1      TCCGCTTGC-CATCGATTTGCTGGAGAAAATGTTGGAGC-TGGATGCGGACAAGCGGATA 149
consensus_8764#2      TCCGCTTGC-CATCGATTTGCTGGAGAAAATGTTGGAGC-TGGATGCGGACAAGCGGATA 209
consensus_8764#0      TTCGTGTGTGCGCTCAAGTCCGGGAAGCGATGCTGTCGCGTGTGTGCGTATTCACGGGTA 300
                      * **  **  *    *  * * ***    *** **  ** **  **** *    *** **

consensus_8764#1      ACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAG 209
consensus_8764#2      ACGGCCGAACAGGCCCTTGCTCATCCCTATTTGGAGAAGTATGCCGATCCGTCCGACGAG 269
consensus_8764#0      CGGGTTAC---GATTCACACCTGCAGCTGTAAGTAGCAGCAGCAGCAGCAGTACGGTGAT 357
                        **       *   *   *      ** *  * ** ** *     * * ** **  ** 

consensus_8764#1      CCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGG 269
consensus_8764#2      CCAACCTCATCGCTGTACGATCAGAGTTTCGAGGACATGGACCTGCCCGTGGAACGGTGG 329
consensus_8764#0      CCGGTGG-ATTGGTGTGTGGTA-----TTCGCG---ACAGTACCGC-----GAGCAGCAG 403
                      **      ** * ***  * *      **** *   *  *  * **     ** * *  *

consensus_8764#1      AAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCA-GCACGCACATAT-TG 327
consensus_8764#2      AAGGAACTGGTCTTCAAAGAGGTACTCAACTTTGTCCCGCAGCA-GCACGCACATAT-TG 387
consensus_8764#0      CAGTTGGTGATTTCCTAA-AGATAAGAAGTCTCCCCTTATTGCGTGCGTGTGTATGTGTG 462
                       **    ** * * * ** ** **   *   *   *     **  **  *   ** * **

consensus_8764#1      GCGGTGAACCTCAAGCGTAATTCCAGAA-------CGAGATCAATCAGT-AAAAGCCCAA 379
consensus_8764#2      GCGGTGAACCTCAAGCGTAATTCCAGAA-------CGAGATCAATCAGT-AAAAGCCCAA 439
consensus_8764#0      GTTCTTATCGGCCACAGTGAACCCAGAGATATCTGCGACCTAAACCGTTCAAAAGTGCAA 522
                      *   * * *  * *  ** *  *****        ***  * ** *  * *****  ***

consensus_8764#1      CT--AGCTGCAGCGAAGGCAAAACGGGAATGT-TCTGACCACCACATAATG-CAAAATAT 435
consensus_8764#2      CT--AGCTGCAGCGAAGGCAAAACGGGAATGT-TCTGACCACCACATAATG-CAAAATAT 495
consensus_8764#0      ATCGAAAAGTGCCTCCAACCAGATGAAAGTGTGTGCGACGACGACACGGTGACAGACGAC 582
                       *  *   *   *     * * * *  * *** *  *** ** ***   ** ** *  * 

consensus_8764#1      ACACGCG----AAAGGACACGCGGTTGTCCATGAA--GGGGTCTTATA-----GAGACGA 484
consensus_8764#2      ACACGCG----AAAGGACACGCGGTTGTCCATGAA--GGGGTCTTATA-----GAGACGA 544
consensus_8764#0      AGAGGAAGCAAAAAAAAAGTCCGTCTGTGTGTGAGTCGGGGCCTACTGCGTGGGCAACAC 642
                      * * *      ***  *    **  ***   ***   **** **  *      *  **  

consensus_8764#1      AGAAGACAGGAGCGGAGGGCTCAAACAGT------AAATTACTGAATGCGTACTACAAGC 538
consensus_8764#2      AGAAGACAGGAGCGGAGGGCTCAAACAGT------AAATTACTGAATGCGTACTACAAGC 598
consensus_8764#0      ACAAAAAAGGTGCTCAGTGTCCCGTCCGTCCCTCCAATCCAGTGAAGATAAAGTGTAAAA 702
                      * ** * *** **  ** *  *   * **      **   * ****     * *  **  

consensus_8764#1      TGACTA-AGAAGCTAGG-TTTGAGTATGGCAGTCTCTATTGAGCACATG---TATGCAGG 593
consensus_8764#2      TGACTA-AGAAGCTAGGGTTGGAGTATGGCAG---------------------------- 629
consensus_8764#0      TTCATATACGAGCGCGCGTGTGTATGTGTGTGTAAGTGTGCGACGTGTGGTATTTGTCTC 762
                      *   ** *  ***  *  *  *  * **   *                            

consensus_8764#1      GTTCACTTTTATAAATTTCTTCATAAACATTGTGCAATTGCGTAAAACGCTTGCCTTCTG 653
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GTGCGCTCACATCTGTTCCGTAATAAATAGAAAAAGTAGGCGGAAAACACCGGGAAAATC 822
                                                                                  

consensus_8764#1      GTGATGTGTGGTGGTGTG-TTGTGTGTGGTGCAAAAGACGAAAAGAGCTAGTACG---GG 709
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      ATTCTGTGTGGAAACGCAACCGAGAGCGGGCCGAAAATGCCCAAGTTTTATCGCACCCGA 882
                                                                                  

consensus_8764#1      TAGCAGCAAGA--GAACACGTAGCCTCT-AGATGCACAAATTGACGTGCACAAGTCCCTG 766
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GATCAACAAAACGGAATGGGAAGTTCCGGAAAAGTATCAGGTGTTGACCCCCGGTCGGTA 942
                                                                                  

consensus_8764#1      TGTGTATGTGCG-TGGTGTGTGATGCAACAGCTAAATACGAACGTTTCTCCTCTGTTTAA 825
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GCGGCGCGTACGGCCAAGTGTGCTCGGCCA--TGGACACGGA-GCACAACGTGAAGGTGG 999
                                                                                  

consensus_8764#1      ACACCAACTAGTAAAGTAAGCGAATGCGAT-AGACATGAGTGAAGATGGAAGCTAGCAAA 884
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      CAATCAAGAAGCTGGCCCGCCCATTCCAGTCAGCCGTCCACGCGAAGCGCACCTACCGGG 1059
                                                                                  

consensus_8764#1      AGCAAAGGGAA-TGTAAAATCCACCCTACAAAATCAGAACTTAGATCCTTG-CTCACTCC 942
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      AGCTGCGCATGCTGAAGCACATGAACCACGAGAACATTATCGGCCTGCTGGACGTGTTCC 1119
                                                                                  

consensus_8764#1      CCCACAGGACACATACCCCGTCCG---TGGTGGGGTGTGTGTTTCAAGCTTTACTGTTGA 999
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      ATCCGGGGGCCAACAATACGCTCGAATCGTTCCAGCAGGTCTACCTGGTGACGCACCTGA 1179
                                                                                  

consensus_8764#1      TG--CAACAACAACAACAACAACAACAAAATTATGAGTTAGATTCAATGTTAATATAC-G 1056
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      TGGGCGCCGACCTGAACAACATCATCCGCACCCAGCGCCTG-TCGGACGAGCATGTCCAG 1238
                                                                                  

consensus_8764#1      TACGCGATAAATGGGTATGAGGTTCAAGGTGTAGTATATGCACGGTACGCTGGAATGAGT 1116
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      TTCCTCGTCTACCAG-ATCCTGCGCGGCCTGAAGTACATACACAGTGCG--GGAATCATT 1295
                                                                                  

consensus_8764#1      AATGGCGGGAAAGAGTCGTTAGA----GTCGAAAGTGTACTTCAAGTAGTAAAAAAACGA 1172
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      CACCGGGATTTGAAGCCGTCCAACATTGCCGTGAACGAGGACTGCGAGCTGAAAATACTG 1355
                                                                                  

consensus_8764#1      TAACAACAAACTTAT--------------------------------------------- 1187
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      -GACTTTGGGTTGGNCCGCCCGACCGAGAACGAGATGACCGGCTACGTCGCGACCCGCTG 1414
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GTACCGGGCGCCCGAAATTATGCTCAACTGGATGCACTACAACCAAACGGTGGACATTTG 1474
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GTCGGTCGGCTGCATCATGGCGGAGCTGCTGACCGGCCGGACACTGTTCCCCGGCACGGA 1534
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      CCACATTCACCAGCTAAACCTTATCATGGAGATACTCGGCACACCGAACGATGAGTTCAT 1594
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GGCGAAAATCTCCTCGGAAAGTGCCCGTCATTACATAAAATCGCTGCCGAAAACGGAGAA 1654
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      GCGCAACTTTAGCGACGTTTTCCGCGGTGCCAATCCGCTTGCCATCGATTTGCTGGAGAA 1714
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      AATGTTGGAGCTGGATGCGGACAAGCGGATAACGGCCGAACAGGCCCTTGCTCATCCCTA 1774
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      TTTGGAGAAGTATGCCGATCCGTCCGACGAGCCAACCTCATCGCTGTACGATCAGAGTTT 1834
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      CGAGGACATGGACCTGCCCGTGGAACGGTGGAAGGAACTGGTCTTCAAAGAGGTACTCAA 1894
                                                                                  

consensus_8764#1      ------------------------------------------------------------
consensus_8764#2      ------------------------------------------------------------
consensus_8764#0      CTTTGTCCCGCAGCAGCACGCACATATTGGCGGTGAACCTCAAGCGTAATTCCAGAACGA 1954
                                                                                  

consensus_8764#1      -------------------------
consensus_8764#2      -------------------------
consensus_8764#0      GATCAATCAGTAAAAGCCCAACTAG 1979
                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)