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Anopheles gambiae
cluster # 8791 cluster # 8791       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8791#0 length = 901 sequences # 5  
consensus_8791#1 length = 832 sequences # 5  
consensus_8791#2 length = 643 sequences # 1  
consensus_8791#3 length = 539 sequences # 1  

consensusID : consensus_8791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 901
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCG-GCAACTGGAAGCCGGACGTGAAATGAAATTTTGTGTTGGTGTTACTATAACAAAACAGAACGCCTGTGCCCGGAATACAATTTGACAATACTTAGCGAAGCAACCGCGCGCCCCGGGACCGCCGCCGTTCCCGACGCAGGATGCAGTACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTCACACGGCCGTGCTGGTCCTTCTTTTCTGTTTCCCCTTCTCTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATG-CCCCCGGTTTG-TTGCCGCATTACAGGCCGTACCAGACCAGTGTGGTGTAAGCAACTATCATAAGCGTAGTGTAAGAAATGAGACAACAATAATACTGGATAATATTGAACGAAAAACAAACACACACACACACAATGGATA]

[+] EMBL BM655524             [CCGCCCACGCGTCCGCCCACGCGTCCG GCAACTGGAAGCCGGACGTGAAATGAAATTTTGTGTTGGTGTTACTATAACAAAACAGAACGCCTGTGCCCGGAATACAATTTGACAATACTTAGCGAAGCAACCGCGCGCCCCGGGACCGCCGCCGTTCCCGACGCAGGATGCAGTACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTCACACGGCCGTGCTGGTCCTTCTTTTCTGTTTCCCCTTCTCTCCGACGGCAGAAGCACGCTGTAAGACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGT   GTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGATCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATA CATGTTGTGTGGTGCGTGCGTCAGTATAC                                                                                                                                                                                            ]
[+] EMBL BM594777             [                        CCGAGCAACTGGAAGCCGGACGTGAAATGAAATTTTGTGTTGGTGTTACTATAACAAAACAGAACGCCGGTGCCCGGAATACAATTTGACAATACTTAGCGAAGCAACCGCGCGCCCCGGGACCGCCGCCGTTCCCGACGCAGGATGCAGTACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTTACACGGCCGTGCTGGTCCTTCTTTTCTGTTTCCC   CTCTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTG                                                                                                                                                                                                           ]
[+] EMBL BX618620             [                                                                                                                                            CCGGGACCGCCGCCGTTCCCGACGCAGGATGCTGTACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTCACACGGCCGTGCTGGTCCTTCTTTTCTGTTTCCCCTTCTCTCCGACGGCAGAAGCACGCTGTAAGACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGT   GTACCTACTTGTTGATTATGCGCTGATCTTC TTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGATCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATGCCCCCCGGTTTGTTTGCCGCATTACAGGCCGT                                                                                                               ]
[+] EMBL BM655601             [                                                                                                                                                                                                                                                                                     AAAACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACTAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATG CCCCCGGTTTG TTGCCGCATTACAGGCCGTACCAGACCAGTGTGGTGTAAGCAACTAT                                                                                   ]
[+] EMBL BM620348             [                                                                                                                                                                                                                                                                                    ccgAACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATG CCCCCGGTTTG TTGCCGCATTACAGGCCGTACCAGACCAGTGTGGTGTAAGCAACTATCATAAGCGTAGTGTAAGAAATGAGACAACAATAATACTGGATAATATTGAACGAAAAACAAACACACACACACACAATGGATA]


>consensus_8791#0 CCGCCCACGCGTCCGCCCACGCGTCCGGCAACTGGAAGCCGGACGTGAAATGAAATTTTG TGTTGGTGTTACTATAACAAAACAGAACGCCTGTGCCCGGAATACAATTTGACAATACTT AGCGAAGCAACCGCGCGCCCCGGGACCGCCGCCGTTCCCGACGCAGGATGCAGTACTAAA TGCAATCCGCATTACTAAGCTATCTCCTCCGTTCACACGGCCGTGCTGGTCCTTCTTTTC TGTTTCCCCTTCTCTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCT GCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGC TGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTA ATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCA ATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGT CTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGA CCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCAGCGAACAACATAAAACC AAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTA AACCACGTGCGTGCAACGGCATAACACACAGCAAACAATGCCCCCGGTTTGTTGCCGCAT TACAGGCCGTACCAGACCAGTGTGGTGTAAGCAACTATCATAAGCGTAGTGTAAGAAATG AGACAACAATAATACTGGATAATATTGAACGAAAAACAAACACACACACACACAATGGAT A



consensusID : consensus_8791#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 832
fasta sequence
                              [CCTACTGGCTTTTCGCTGTAGCATTCGTTCAGGTTCTAGATCCGTCTAACGTTGTTAACTGTGCAAAATGGTGACCGCCAAGAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCTGGCGCTGGTGATGAAATCTGGCAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGCTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTAGTGGATGCTACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGACTCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACGAAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGACCGGTGTGCACCATTACAACGGCAACAACATTGAGCTGGGTACCGCCTGCGGTAAATACTTCCGCGTGTGCACCCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGCCT-GCCGGAAGCACAGGCCGGTGGACAGTAAATGGTGACGTGCTGTATATATTCCGCCTGTCGGGCTTTTCCATTGTATGGGAAATGCCGGCGAGGCAGTTATTAAAATAAAAAAGCGGTGTCTGTAGGCACACAGAACCCGACGAAACAATAAAAAAAAAAAAAAAAAAAAAAAGGC]

[+] EMBL CNS09255             [CCTACTGGCTTTTCGCTGTAGCATTCGTTCAGGTTCTAGATCCGTCTAACGTTGTTAACTGTGCAAAATGGTGACCGCCAAGAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCTGGCGCTGGTGATGAAATCTGGCAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGCTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTAGTGGATGCTACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGACTCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACGAAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGACCGGTGTGCACCATTACAACGGCAACAACATTGAGCTGGGTACCGCCTGCGGTAAATACTTCCGCGTGTGCACCCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGCCT GCCGGAAGCACAGGCCGGTGGACAGTAAATGGTGACGTGCT                                                                                                                                      ]
[+] EMBL BM598763             [                 ccgGCATTCGTTCAGGTTCTAGATCCGTCTAACGTTGTTAACTGTGCAAAATGGTGACCGCCAAGAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCTGGCGCTGGTGATGAAATCTGGCAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGCTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTTGTGGATGCTACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGACTCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACGAAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGAGCGGTGTGCACCATTACAACGGCAACAACATTGAGCTGGGTACGGCCTGCGGTAAATACTTCCGCGTGTGCACCCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGCCTGGCCGGAAGCACAGGCCGGTGGACAGTAAATGGTGACGTGCTGTATATATTCCGCCTGTCGGGC                                                                                                                ]
[+] EMBL BM634344             [                      ccgCGTTCAGGTTCTAGATCCGTCTAACGTTGTTAACTGTGCAAAATGGTGACCGCCAAGAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCTGGCGCTGGTGATGAAATCTGGCAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGCTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTAGTGGATGCTACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGACTCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACGAAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGACCGGTGTGCACCATTACAACGGCAACAACATTGAGCTGGGTACCGCCTGCGGTAAATACTTCCGCGTGTGCACCCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGCCT GCCGGAAGCACAGGCCGGTGGACAGTAAAT                                                                                                                                                 ]
[+] EMBL BX614387             [                                                ACGTTGTTAACTGTGCAAAATGGTGACCGCCAAGAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCTGGCGCTGGTGATGAAATCTGGCAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGTTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTTGTGGATGCTACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGACTCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACGAAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGACCGGTGTGCACCATTACAACGGCAACAACA                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS09256             [                                                                                                                                                                 AGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGCTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTAGTGGATGCTACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGACTCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACGAAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGACCGGTGTGCACCATTACAACGGCAACAACATTGAGCTGGGTACCGCCTGCGGTAAATACTTCCGCGTGTGCACCCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGCCT GCCGGAAGCACAGGCCGGTGGACAGTAAATGGTGACGTGCTGTATATATTCCGCCTGTCGGACTTTTCCATTGTATGGGAAATGCCGGCGAGGCAGTTATTAAAATAAAAAAGCGGTGTCTGTAGGCACACAGAACCCGACGAAACAATAAAAAAAAAAAAAAAAAAAAAAAGGC]


>consensus_8791#1 CCTACTGGCTTTTCGCTGTAGCATTCGTTCAGGTTCTAGATCCGTCTAACGTTGTTAACT GTGCAAAATGGTGACCGCCAAGAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCT GGCGCTGGTGATGAAATCTGGCAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCT CCGCCAGGGAAAGGCCAAGCTGGTCATCATTGCCAACAACACGCCGCACCTCCGGTAAGT AGCATGTCCGCGCGCGGGCGACCGATTACCGAGAAGTAGAGTTTTCCTTTAGTGGATGCT ACGTTTTGTGGAATCATATGGAGTCGATTGTGACTGAGAAGTATGTTTTCCCGAGCTGAC TCACTCAGCTGCCCGAATGTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGG GAGGTGCTCACTCGGAAGTACGTACCGTGTACACGTCCAGTGAATCCACATGGTTCAACG AAATGGAACGGCCCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGAC CGGTGTGCACCATTACAACGGCAACAACATTGAGCTGGGTACCGCCTGCGGTAAATACTT CCGCGTGTGCACCCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGCCTGCC GGAAGCACAGGCCGGTGGACAGTAAATGGTGACGTGCTGTATATATTCCGCCTGTCGGGC TTTTCCATTGTATGGGAAATGCCGGCGAGGCAGTTATTAAAATAAAAAAGCGGTGTCTGT AGGCACACAGAACCCGACGAAACAATAAAAAAAAAAAAAAAAAAAAAAAGGC



consensusID : consensus_8791#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 643
fasta sequence
                              [GACCCACGCGTCCGACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTTACACGGCCGTGCTGGTCCTTCTTTTCTGTTTCCCCTCTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCATCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATGCCCCCGGTTTGTTGCCGCATTACAGGCCGTACCAGACCAGTGTGGT]

[+] EMBL BM620090             [GACCCACGCGTCCGACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTTACACGGCCGTGCTGGTCCTTCTTTTCTGTTTCCCCTCTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAGCGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCATCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGTGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATGCCCCCGGTTTGTTGCCGCATTACAGGCCGTACCAGACCAGTGTGGT]


>consensus_8791#2 GACCCACGCGTCCGACTAAATGCAATCCGCATTACTAAGCTATCTCCTCCGTTTACACGG CCGTGCTGGTCCTTCTTTTCTGTTTCCCCTCTCCGACGGCAGAAGCACGCTGTAAAACGG CCAGTGGGCGTGCTGCTGCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCT ACTTGTTGATTATGCGCTGATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAAC GGCTCTCACTGTGATTAATTAGAACGAATTGCAAAAAATCCAGTTGCGAATTAAGTATTA CCGATGCGGCGGTGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATG TGGTGCCGGGTCGGGGTCTGATGAGAACGAACGAGATATACTACCACAGGTTACATAGAG CGATACATACTGACCGACCGACCGTATTTGTGTAGACTCCACTTCTATATGTAATCATCA TCGAACAACATAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGTGTGGTGCGT GCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAGCAAACAATGCCC CCGGTTTGTTGCCGCATTACAGGCCGTACCAGACCAGTGTGGT



consensusID : consensus_8791#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 539
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGAAGACGGCCCCATTCGATCCCCGCTTCCCCAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCCACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGTGCGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTTCGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAAATTGAAATTCAACCTACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAG]

[+] EMBL BM652146             [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGAAGACGGCCCCATTCGATCCCCGCTTCCCCAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCCACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGTGCGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTTCGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAAATTGAAATTCAACCTACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAG]


>consensus_8791#3 CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGAAGACGGCCCCATTCGATC CCCGCTTCCCCAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCCACC GCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCT CGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCT TTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGTGCGCGCT GATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTTCGCATACACCCTTTGC TAGTAAACCATCAGAAGTAACAGAAAATTGAAATTCAACCTACTACTACTACTGCTACCA CCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCA CGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8791#0      CCGCCCACGCGTCCGCCCACGCGTCCGGCAACTGGAAGCCGGACGTGAAATGAAATTTTG 60
consensus_8791#2      ------------------------------------------------------------
consensus_8791#3      ------------------------------------------------------------
consensus_8791#1      ---------------------------------------CCTACTGGCTTTTCGCTGTAG 21
                                                                                  

consensus_8791#0      TGTTGGTGTTACTATAACAAAACAGAACGCCTGTGCCCGGAATACAATTTGACAATACTT 120
consensus_8791#2      ------------------------------------------------------------
consensus_8791#3      ------------------------------------------------------------
consensus_8791#1      CATTCGTTCAGGTTCTAGATCCGTCTAACGTTGTTAACTGTGCAAAATGGTGACCGCCAA 81
                                                                                  

consensus_8791#0      AGCGAAGCAACCGCGCGCCCCGGGACCGCCGCCGTTCCCGACGCAGGATGCAGTACTAAA 180
consensus_8791#2      ---------------------------------------GACCCACG-CGTCCGACTAAA 20
consensus_8791#3      ------------------------------------------------------------
consensus_8791#1      GAAGCAGAAAAAGGCTTTGGAGAGCATCAACTCTCGCCTGGCGCTGGTGATGAAATCTGG 141
                                                                                  

consensus_8791#0      TGCAATCCGCATTACTAAGCTATCTCCTCCGTTCACACGGCCGTGCTGGTCCTTCTTTTC 240
consensus_8791#2      TGCAATCCGCATTACTAAGCTATCTCCTCCGTTTACACGGCCGTGCTGGTCCTTCTTTTC 80
consensus_8791#3      ------------------------------------------------------------
consensus_8791#1      CAAGTCCTGCCTGGGCTACAAGCAGACTCTGCGTACCCTCCGCCAGGGAAAGGCCAAGCT 201
                                                                                  

consensus_8791#0      TGTTTCCCCTTCTCTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCT 300
consensus_8791#2      TGTTTCCCCT---CTCCGACGGCAGAAGCACGCTGTAAAACGGCCAGTGGGCGTGCTGCT 137
consensus_8791#3      --------------------------------CCGCGGACGCGTGGGCGGACGCGTGGGC 28
consensus_8791#1      GGTCATCATTG--CCAACAACACGCCGCACCTCCGGTAAGTAGCATGTCCGCGCGCGGGC 259
                                                      * *   *   *   *    ** *  *  

consensus_8791#0      GCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTT--GATTATGC 358
consensus_8791#2      GCTTGCGCAAGGGAGAAGCGGGCCATTTTATAGTGTAGTACCTACTTGTT--GATTATGC 195
consensus_8791#3      GGACGCGTGGGCGAAGACGGCCCCATTCGATCCCCGCTTCCCCAACCAG---AACCAGAC 85
consensus_8791#1      GACCGATTACCGAGAAGTAGAGTTTTCCTTTAGTGGATGCTACGTTTTGTGGAATCATAT 319
                      *   *              *     *    *                      *  *   

consensus_8791#0      GCTG-ATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGA 417
consensus_8791#2      GCTG-ATCTTCTTTTGCGAGAGCACGGGCTCGGACGATACGGAAACGGCTCTCACTGTGA 254
consensus_8791#3      CAAG-CACTGCTACCAGAGCTATCTGGATTTCCACCGCTGCGAGAAGGTCAAGGGCGAGG 144
consensus_8791#1      GGAGTCGATTGTGACTGAGAAGTATGTTTTCCCG-AGCTGACTCACTCAGCTGCCCGAAT 378
                         *    *  *             *   *              *           *   

consensus_8791#0      TTAATTAGA-ACG-AATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGG 475
consensus_8791#2      TTAATTAGA-ACG-AATTGCAAAAAATCCAGTTGCGAATTAAGTATTACCGATGCGGCGG 312
consensus_8791#3      GCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGG 204
consensus_8791#1      GTGGTGACCCATTGGAAAACCTATGGAGTGATCATTGTGGGGGAGGTGCTCACTCGGAAG 438
                            *   *    *   *                            *  *  **   *

consensus_8791#0      TGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGG-- 533
consensus_8791#2      TGTCAATGGAAAACACACAACAGCCATTCGATGACACGTGTGCCGATGTGGTGCCGGG-- 370
consensus_8791#3      TTGAGAAGTGGGACAGCCAGC-GCGAG--GAGGGCACCTTTGCCGGCCACATCTAAGGCA 261
consensus_8791#1      TACGTACCGTGTACACGT-----CCAGT-GAATCCACATGGTTCAACGAAATGGAACGGC 492
                      *    *      ***        * *   **   *** *    *       *     *  

consensus_8791#0      TC--GGGGTCTGATGAGAACGAACGAGATATACTAC-----------CACAGGT---TAC 577
consensus_8791#2      TC--GGGGTCTGATGAGAACGAACGAGATATACTAC-----------CACAGGT---TAC 414
consensus_8791#3      TC--CAAGCGAACCGGGAGAGGGAGAGAGAGAGTGCGC--------GCTGATGT---TTG 308
consensus_8791#1      CCAACAGGGTAAATCGGAGATCGAGTACTATGCTATGCTGGCCAAGACCGGTGTGCACCA 552
                       *     *        **      *    *   *             *    **      

consensus_8791#0      ATAGAGCGATACATACTGACCGACCGACCGTATTTGTG-TAGACTCCACTTCTATATGTA 636
consensus_8791#2      ATAGAGCGATACATACTGACCGACCGACCGTATTTGTG-TAGACTCCACTTCTATATGTA 473
consensus_8791#3      GTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTTCG-CATACACC-CTTTGCTAGTAA 366
consensus_8791#1      TTACAACGGCAACAACATTGAGCTGGGTACCGCCTGCGGTAAATACTTCCGCGTGTGCAC 612
                       *  * **       *         *        *  *  * *  *  *           

consensus_8791#0      ATCATCAGCGAACAACA--TAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGT 694
consensus_8791#2      ATCATCATCGAACAACA--TAAAACCAAATCTCAACACAAAACCATCTATACCATGTTGT 531
consensus_8791#3      ACCATCAG-AAGTAACA--GAAAATTGAAATTCAACCTACTACTACTACTGCTACCACCA 423
consensus_8791#1      CCTCTCGATCACCGACGCCGGAGACTCCGATATCATTCGCAGC--CTGCCGGAAGCACAG 670
                          **    *   **     * *          *       *          *      

consensus_8791#0      GT-GGTGCG--TGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAG 751
consensus_8791#2      GT-GGTGCG--TGCGTCAGTATACCAGTAAACCACGTGCGTGCAACGGCATAACACACAG 588
consensus_8791#3      GC-AATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCG--CAACGTTGCCATCCGTC- 479
consensus_8791#1      GCCGGTGGACAGTAAATGGTGACGTGCTGTATATATTCCGCCTGTCGGGCTTTTCCATTG 730
                      *    *            *        *        * **     **        *    

consensus_8791#0      CAAACAATGCCCCCGGTTTGTTGCCGCATTACAGGCCGTACCAGACCAGTGTGGTGTAAG 811
consensus_8791#2      CAAACAATGCCCCCGGTTTGTTGCCGCATTACAGGCCGTACCAGACCAGTGTGGT----- 643
consensus_8791#3      ---ACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGA 536
consensus_8791#1      T--ATGGGAAATGCCG-GCGAGGCAGTTATTAAAATAAAAAAGCGGTGTCTGTAGGCACA 787
                         *           *   *     *   *  *      *                    

consensus_8791#0      CAACTATCATAAGCGTAGTGTAAGAAATGAGACAACAATAATACTGGATAATATTGAACG 871
consensus_8791#2      ------------------------------------------------------------
consensus_8791#3      GAG--------------------------------------------------------- 539
consensus_8791#1      CAGAACCCGACGAAACAATAAAAAAAAAAAAAAAAAAAAAAAGGC--------------- 832
                                                                                  

consensus_8791#0      AAAAACAAACACACACACACACAATGGATA 901
consensus_8791#2      ------------------------------
consensus_8791#3      ------------------------------
consensus_8791#1      ------------------------------
                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)