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Anopheles gambiae
cluster # 8793 cluster # 8793       Sequences # 12       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8793#0 length = 1879 sequences # 8  
 consensus_8793#1 length = 1048 sequences # 3  
consensus_8793#2 length = 497 sequences # 1  
consensusID : consensus_8793#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1879
fasta sequence 
                              [AAAAAATCTGTTAGGTTGCTTGGAACAGGAAAACACAAAAATACACACTTATGGATATGTATAGGCTGTACACAGGTACACACAAAATCGAGACAAAACAAAACCTATCTACTATTCAAACCAACCCACAAACAACAACAACAACAACAACAAAAAAAAGAAAAAAAGAAAGAGAGAACATACGCGAAAGAAAGTAGCAAACACAAACAAGGAGAATAAAACACAAGCAAATTTAAGAATTGGTAAGGGCACGGAACACAAGAACACGAATGTAGGTACAAACATATGTATGTACGGCCTTGCATGCATGTATATATGTATGTATGTATGTATAATATCGCGTCACTGTGCTGTGTTTAAATGAATGTAACCTATTTCGTTGGTTTGTTTCCAAACTTTTTCATTTTCTTTTGAGAGCTGCTGCAAAGCGAGCAAAAGAAAGCAGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCAAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTCCCCATTGTGAAATTGTGCAACATTTCTCTCTCACTCTCTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATA--GTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACTTCGTTTTTCATTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGATTAAAGAAACACGAAAAAAAAAATAGTAATGGAAAATAAGTAACAAATAGATGGAGCAAAATAACAATAGACAAATCTTGAGCGATTGATCAGCAGCAATAGCAACAGTTACACAGATACACAACAGTAACAGCAAACATAAACCCGGACACAGACGGTTCTGACACACTCAGCTGCATCTTGTGACTCGTAATTACGAACAGAAATAGTCAAAAATAAGGCGTTTAACAAGGGATGCGAAGAGGTACACAAACATACAAATAAATGAGATGTAACGTGCAAGAAGATAAGATTACCAAAAAATAATTTTAAGTATTTAAGGGATAAAGGAGATAACAAACAAAGGAAGAAAAAACACATACATGAGTAAAAAAAAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAATGATTAAAACAGATGAAGAAAGAGTGAAAGCGAAGGCCGGAGATGGCAAGGGAGAATGAGCAACATTATGACACACACGTAAACTAACCAACATTTACGCAGAACAACAAAAGGATGCGTGTATGCTTAACACGAAGAGTGAACCATTGGAACAGAAAACGAAATAAATAATGATGGGGAAGAGAGATAGAGAGCGCGCGAGAGAGAGAGAAAGAGAGAGAAAGAGAAAGAGA---A-AGAG--AGAGAGCGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGACAGTGGTAGAAAGATTGTGAGAAAGAGAGAGGACGAGGTAGAGAGACAAAAGAAGAAGTGTAGCGAAGAGCACGAAAGAGAAGCATACATTAAATGACTTCGAATAATTGCAATGATAGTTACGAGAGACAAAAGAAAGAAGAAAGCAAACAACAAAAAAGGAAAGATAAAAAAAAAAACAAAAGTACGCCTATCGTAGATTTGTGCTACGTACAAGTATATAAATCACTAA]

[+] EMBL BX614415             [AAAAAATCTGTTAGGTTGCTTGGAACAGGAAAACACAAAAATACACACTTATGGATATGTATAGGCTGTACACAGGTACACACAAAATCGAGACAAAACAAAACCTATCTACTATTCAAACCAACCCACAAACAACAACAACAACAACAACAAAAAAAAGAAAAAAAGAAAGAGAGAACATACGCGAAAGAAAGTAGCAAACACAAACAAGGAGAATAAAACACAAGCAAATTTAAGAATTGGTAAGGGCACGGAACACAAGAACACGAATGTAGGTACAAACATATGTATGTACGGCCTTGCATGCATGTATATATGTATGTATGTATGTATAATATCGCGTCACTGTGCTGTGTTTAAATGAATGTAACCTATTTCGTTGGTTTGTTTCCAAACTTTTTCATTTTCTTTTGAGAGCTGCTGCAAAGCGAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX622799             [                                                                                                                                                                                     ACGCGAAAGAAAGTAGCAAACACAAACAAGGAGAATAAAACACAAGCAAATTTAAGAATTGGTAAGGGCACGGAACACAAGAACACGAATGTAGGTACAAACATATGTATGTACGGCCTTGCATGCATGTATATATGTATGTATGTATGTATAATATCGCGTCACTGTGCTGTGTTTAAATGAATGTAACCTATTTCGTTGGTTTGTTTCCAAACTTTTTCATTTTCTTTTGAGAGCTGCTGCAAAGCGAGCAAAAGAAAGCAGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCAAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTCCCCATTGTGAAATTGTGCAACATTTCTCTCTCACTCTCTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATA  GTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACTTCGTTTTTCATTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGATTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM622784             [                                                                                                                                                                                                                                                       GGCACGGAACACAAGAACACGAATGTAGGTACAAACATATGTATGTACGGCCTTGCATGCATGTATATATGTATGTATGTATGTATAATATCGCGTCACTGTGCTGTGTTTAAATGAATGTAACCTATTTCGTTGGTTTGTTTCCAAACGTTTTCATTTTCTTTTGAGAGCTGCTGCAAAGCGAGCAAAAGAAAGCAGAAGAAGCTAAGGCAAGGAAACACATTAGTAGCAAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTCCCCATTGTGAAATTGTGCAACATTTCTCTCTCACTCTCTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACTTCGTTTTTCATTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX608889             [                                                                                                                                                                                                                                                                                                                                                                               TAACCTATTTCGTTGGTTTGTTTCCAAACTTTTTCATTTTCTTTTGAGAGCTGCTGCAAAGCGAGCAAAAGAAAGCAGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCAAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTCCCCATTGTGAAATTGTGCAACATTTCTCTCTCACTCTCTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATA  GTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAAC GAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACTTCGTTTTTCATTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGATTAAAGAAACACGAAAAAAAAAATAGTAATGGAAAATAAGTAACAAATAGATGGAGCAAAATAACAATAGACAAATCTTGAGCGATTGATCAGCAGCAATAGCAACAGTTACACAGATACACAACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX612734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     atctaTCTCTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATA  GTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACTTCGTTTTTCATTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGATTAAAGAAACACGAAAAAAAAAATAGTAATGGAAAATAAGTAACAAATAGATGGAGCAAAATAACAATAGACAAATCTTGAGCGATTGATCAGCAGCAATAGCAACAGTTACACAGATACACAACAGTAACAGCAAACATAAACCCGGACACAGACGGTTCTGACACACTCAGCTGCATCTTGTGACTCGTAATTACGAACAGAAATAGTCAAAAATAAGGCGTTTAACAAGGGATGCGAAGAGGTACACAAACATACAAATAAATGAGATGTAACGTGCAAGAAGATAAGATTACCAAAAAATAATTTTAAGTATTTAAGGGATAAAGGAGATAACAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX618158             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAAAAAATAATTTTAAGTATTTAAGGGATAAAGGAGATAACAAACAAAGGAAGAAAAAACACATACATGAGTAAAAAAAAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAATGATTAAAACAGATGAAGAAAGAGTGAAAGCGAAGGCCGGAGATGGCAAGGGAGAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM635895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgAAACAAAGGAAGAAAAAACACATACATGAGTAAAAAAAAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCGAGAGCGAAAGCGAAAATGCAAAATGATTAAAACAGATGAAGAAAGAGTGAAAGAGAGGGCCGGAGATGGCAAGGGAGAATGAGCAACATTATGACACACACGTAAACTAACCAACATTTACGCAGAACAACAAAAGGATGCGTGTATGCTTAACACGAAGAGTGAACCATTGGAACAGAAAACGAAATAAATAATGATGGGGAAGAGAGATAGAGAGCGCGCGAGAGAGAGAGAAAGAGAGAGAAAGAGAAAGAGA   A AGAG  AGAGAGCGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGACAGTGGTAGAAAGATTGTGAGAAAGAGAGAGGACGAGGTAGAGAGACAAAAGAAGAAGTGTAGCGAAGAGCACGAAAGAGAAGCATACATTAAATGACTTCGAATAATTGCAATGATAGTTACGAGAGACAAAAGAAAGAAGAAAGCAAACAACAAAAAAGGAAAGATAAAAAAAAAAACAAAAGTACGCCTATCGTAGATTTGTGCTACGTACAAGTATATAAATCACTAA]
[+] EMBL BX612839             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAATGATTAAAACAGATGAAGAAAGAGTGAAAGCGAAGGCCGGAGATGGCAAGGGAGAATGAGCAACATTATGACACACACGTAAACTAACCAACATTTACGCAGAACAACAAAAGGATGCGTGTATGCTTAACACGAAGAGTGAACCATTGGAACAGAAAACGAAATAAATAATGATGGGGAAGAGAGATAGAGAGCGCGCGAGAGAGGGAGAAAGAGAGAGAAAGAGAGAGAGAGCGAGAGAGAAAGAGAAAGAGAGAGAAAAAGAGAGAGATAGAGAGAGAGACAGTGGTAGAAAGATTGTGAGAAAGAGAGAGGACGAGTTAGAGAGACAAAAGAAGAAGTGTAGCGAAGAGCACGAAAGAGAAGCATACATTAAATGACTTCGAATAATTGCAATGATAGTTACGAGAGACAAAAGAAAGAAGAA                                                                                        ]




>consensus_8793#0
AAAAAATCTGTTAGGTTGCTTGGAACAGGAAAACACAAAAATACACACTTATGGATATGT
ATAGGCTGTACACAGGTACACACAAAATCGAGACAAAACAAAACCTATCTACTATTCAAA
CCAACCCACAAACAACAACAACAACAACAACAAAAAAAAGAAAAAAAGAAAGAGAGAACA
TACGCGAAAGAAAGTAGCAAACACAAACAAGGAGAATAAAACACAAGCAAATTTAAGAAT
TGGTAAGGGCACGGAACACAAGAACACGAATGTAGGTACAAACATATGTATGTACGGCCT
TGCATGCATGTATATATGTATGTATGTATGTATAATATCGCGTCACTGTGCTGTGTTTAA
ATGAATGTAACCTATTTCGTTGGTTTGTTTCCAAACTTTTTCATTTTCTTTTGAGAGCTG
CTGCAAAGCGAGCAAAAGAAAGCAGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCAAA
CAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGC
ATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTC
CCCATTGTGAAATTGTGCAACATTTCTCTCTCACTCTCTCTCTCTCCTTCTTGATGGCAC
ACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTGTGTGCTC
TCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACT
GCAGAGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACTTCGTTTTTCA
TTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGATTAAAGAAACACGAAAAAAAAAAT
AGTAATGGAAAATAAGTAACAAATAGATGGAGCAAAATAACAATAGACAAATCTTGAGCG
ATTGATCAGCAGCAATAGCAACAGTTACACAGATACACAACAGTAACAGCAAACATAAAC
CCGGACACAGACGGTTCTGACACACTCAGCTGCATCTTGTGACTCGTAATTACGAACAGA
AATAGTCAAAAATAAGGCGTTTAACAAGGGATGCGAAGAGGTACACAAACATACAAATAA
ATGAGATGTAACGTGCAAGAAGATAAGATTACCAAAAAATAATTTTAAGTATTTAAGGGA
TAAAGGAGATAACAAACAAAGGAAGAAAAAACACATACATGAGTAAAAAAAAAAGAAACT
AACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGC
AAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAATGATTAAAAC
AGATGAAGAAAGAGTGAAAGCGAAGGCCGGAGATGGCAAGGGAGAATGAGCAACATTATG
ACACACACGTAAACTAACCAACATTTACGCAGAACAACAAAAGGATGCGTGTATGCTTAA
CACGAAGAGTGAACCATTGGAACAGAAAACGAAATAAATAATGATGGGGAAGAGAGATAG
AGAGCGCGCGAGAGAGAGAGAAAGAGAGAGAAAGAGAAAGAGAAAGAGAGAGAGCGAGAG
AGAAAGAGAAAGAGAGAGAGAGAGAGACAGTGGTAGAAAGATTGTGAGAAAGAGAGAGGA
CGAGGTAGAGAGACAAAAGAAGAAGTGTAGCGAAGAGCACGAAAGAGAAGCATACATTAA
ATGACTTCGAATAATTGCAATGATAGTTACGAGAGACAAAAGAAAGAAGAAAGCAAACAA
CAAAAAAGGAAAGATAAAAAAAAAAACAAAAGTACGCCTATCGTAGATTTGTGCTACGTA
CAAGTATATAAATCACTAA

consensusID : consensus_8793#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1048
fasta sequence 
                              [CCGGGCGGGAGGGACATGCATTGCTGGGAGGTTCTGTTTTCTGTTTTCCCTTTCCTTGTTTACTGTGATTTCTGTGGCGGCTTGTATTGCACGGATAAGCTGTTAAAATGGATTTGATCCATCTTCGAAACCCAAGTGTTCGATCGTCTGCGTGGGTGAGTGTGTATGAGTATGGATGTGAAAAAAAAAAAAATGGACGAAACTGTTTTCATTTACTCTAACTTTGTGTATCAAATTATTTAATGCTATCGTTACGTCAGGTTCTTTGTGCTGTGGTATTACTAAACGTTAAAACTATACCCGAAAACAATAGATTAAACGCGGGAGAGCAAGCAGTGAGAATACAATACCAACTATAACTGGAAGCCGAAATTATAATGTGAAAGACAACTAAATGCATACGCTCAGCAATACGGATTAAGTGTAACAACTAATTAACACCATCTTCTTGTCGTTGTTGTATTCTAATGCAGTGAACACGTGTGTGAGAG--AAAGAGAGATTGAGTTACGCAAAAAAGAAAGGATTAAATAAGCAAAGGAACAAACGAAAAACTAAACAACAAACACAATAAAAGGTAACAACAGACATCAATACAACAAGAGTAAACGCTCTCTGTCATATAAACACACGCGCCCGCACCACAGTGCACCAAGCTATAGGGAGCTAAAAAATCTGTTAGGTTGCTTGGAAAAGGGAAACACAAAAATACACACTTATGGATATGTATAGGCTGTACACAGGTACACACAAAATCGAGGCAAAACAAAACCTATCTACTATTCAAACCAACCCACAAACAAATCCTTGAAAGAGAATCTCGAAGCAGTACCGGCTAAAACAGAACACTAACGAAAGGTAGGAATAGATTAGTAGAAAAAAAAAAGATTTAACAAACAAAAAAAAAAAGAAAGAAACAGATCAAATGACATGTAAATCTTGCAAATTTGTAGTTTAAAACAATGGCACGCCAAACAAGCAAGCCAAAATGCGGGAAACGAATACTTATTCCCGTTGTTTTCCCCCCCTGTTTACAATTCTCATCCCTTC]

[+] EMBL BM636765             [CCGGGCGGGAGGGACATGCATTGCTGGGAGGTTCTGTTTTCTGTTTTCCCTTTCCTTGTTTACTGTGATTTCTGTGGCGGCTTGTATTGCACGGATAAGCTGTTAAAATGGATTTGATCCATCTTCGAAACCCAAGTGTTCGATCGTCTGCGTGGGTGAGTGTGTATGAGTATGGATGTGAAAAAAAAAAAAATGGACGAAACTGTTTTCATTTACTCTAACTTTGTGTATCAAATTATTTAATGCTATCGTTACGTCAGGTTCTTTGTGCTGTGGTATTACTAAACGTTAAAACTATACCCGAAAACAATAGATTAAACGCGGGAGAGCAAGCAGTGAGAATACAATACCAACTATAACTGGAAGCCGAAATTATAATGTGAAAGACAACTAAATGCATACGCTCAGCAATACGGATTAAGTGTAACAACTAATTAACACCATCTTCTTGTCGTTGTTGTATTCTAATGCAGTGAACACGTGTGTGAGAG  AAAGAGAGATTGAGTTACGCAAAAAAGAAAGGATTAAATAAGCAAAGGAACAAACGAAAAACTAAACAACAAACACAATAAAAGGTAACAACAGACATCAATACAACAAGAGTAAACGCTCTCTGTCATATAAACACACGCGCCCGCACCACAGTGCACCAAGCTATAGGGAGCTAAAAAATCTGTTAGGTTGCTTGGAAAAG                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM578085             [                                                             ccgGTGATTTCTGTGGCGGCTTGTATTGCACGGATAAGCTGTTAAAATGGATTTGATCCATCTTCGAAACCCAAGTGTTCGATCGTCTGCGTGGGTGAGTGTGTATGAGTATGGATGTGAAAAAAAAAAAAATGGACGAAACTGTTTTCATTTACTCTAACTTTGTGTATCAAATTATTTAATGCTATCGTTACGTCAGGTTCTTTGTGCTGTGGTATTACTAAACGTTAAAACTATACCCGAAAACAATAGATTAAACGCGGGAGAGCAAGCAGTGAGAATACAATACCAACTATAACTGGAAGCCGAAATTATAATGTGAAAGACAACTAAATGCATACGCTCAGCAATACGGATTAAGTGTAACAACTAATTAACACCATCTTCTTGTCGTTGTTGTATTCTAATGCAGTGAACACGTGTGTGAGAG  AAAGAGAGATTGAGTTACGCAAAAAAGAAAGGATTAAATAAGCAAAGGAACAAACGAAAAACTAAACAACAAACACAATAAAAGGTAACAACAGACATCAATACAACAAGAGTAAACGCTCTCTGTCATATAAACACACGCGCCCGCACCACAGTGCACCAAGCTATAGGGAGCTAAAAAATCTGTTAGGTTGCTTGGAAAAGGGAAACACAAAAATACACACTTATGGATATGTATAGGCTGTACACAGGTACACACAAAATCGAGGCAAAACAA                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX613437             [                                                                                                                                                                                                                                                                                                                                 CGGGAGAGCAAGCAGTGAGAATACTATACCAACTATAACTGGAAGCCGAAATTATAATGTGAAAGACAACTAAATGCATACGCTCAGCAATACGGATTAAGTGTAACAACTAATTAACACCATCTTCTTGTCGTTGTTGTATTCTAATGCAGTGAACACGTGTGTGAGAGAAAAAGAGAGATTGAGTTACGCAAAAAAGAAAGGATTAAATAAGCAAAGGAACAAACGAAAAACTAAACAACAAACACAATAAAAGGTAACAACAGACATCAATACAACAAGAGTAAACGCTCTCTGTCATATAAACACACGCGCCCGCACCACAGTGCACCAAGCTATAGGGAGCTAAAAAATCTGTTAGGTTGCTTGGAACAGGAAAACACAAAAATACACACTTATGGATATGTATAGGCTGTACACAGGTACACACAAAATCGAGACAAAACAAAACCTATCTACTATTCAAACCAACCCACAAACAAATCCTTGAAAGAGAATCTCGAAGCAGTACCGGCTAAAACAGAACACTAACGAAAGGTAGGAATAGATTAGTAGAAAAAAAAAAGATTTAACAAACAAAAAAAAAAAGAAAGAAACAGATCAAATGACATGTAAATCTTGCAAATTTGTAGTTTAAAACAATGGCACGCCAAACAAGCAAGCCAAAATGCGGGAAACGAATACTTATTCCCGTTGTTTTCCCCCCCTGTTTACAATTCTCATCCCTTC]




>consensus_8793#1
CCGGGCGGGAGGGACATGCATTGCTGGGAGGTTCTGTTTTCTGTTTTCCCTTTCCTTGTT
TACTGTGATTTCTGTGGCGGCTTGTATTGCACGGATAAGCTGTTAAAATGGATTTGATCC
ATCTTCGAAACCCAAGTGTTCGATCGTCTGCGTGGGTGAGTGTGTATGAGTATGGATGTG
AAAAAAAAAAAAATGGACGAAACTGTTTTCATTTACTCTAACTTTGTGTATCAAATTATT
TAATGCTATCGTTACGTCAGGTTCTTTGTGCTGTGGTATTACTAAACGTTAAAACTATAC
CCGAAAACAATAGATTAAACGCGGGAGAGCAAGCAGTGAGAATACAATACCAACTATAAC
TGGAAGCCGAAATTATAATGTGAAAGACAACTAAATGCATACGCTCAGCAATACGGATTA
AGTGTAACAACTAATTAACACCATCTTCTTGTCGTTGTTGTATTCTAATGCAGTGAACAC
GTGTGTGAGAGAAAGAGAGATTGAGTTACGCAAAAAAGAAAGGATTAAATAAGCAAAGGA
ACAAACGAAAAACTAAACAACAAACACAATAAAAGGTAACAACAGACATCAATACAACAA
GAGTAAACGCTCTCTGTCATATAAACACACGCGCCCGCACCACAGTGCACCAAGCTATAG
GGAGCTAAAAAATCTGTTAGGTTGCTTGGAAAAGGGAAACACAAAAATACACACTTATGG
ATATGTATAGGCTGTACACAGGTACACACAAAATCGAGGCAAAACAAAACCTATCTACTA
TTCAAACCAACCCACAAACAAATCCTTGAAAGAGAATCTCGAAGCAGTACCGGCTAAAAC
AGAACACTAACGAAAGGTAGGAATAGATTAGTAGAAAAAAAAAAGATTTAACAAACAAAA
AAAAAAAGAAAGAAACAGATCAAATGACATGTAAATCTTGCAAATTTGTAGTTTAAAACA
ATGGCACGCCAAACAAGCAAGCCAAAATGCGGGAAACGAATACTTATTCCCGTTGTTTTC
CCCCCCTGTTTACAATTCTCATCCCTTC

consensusID : consensus_8793#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence 
                              [CATGAGTAAAAAAAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAATGATTAAAACAGATGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCAAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTCCCCATTGTGAAATTGTGCAACATTTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCG]

[+] EMBL BX615541             [CATGAGTAAAAAAAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAATGATTAAAACAGATGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCAAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAAGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTTTCCCCATTGTGAAATTGTGCAACATTTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTGTGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACGTACACGCAAGGCAAGCG]




>consensus_8793#2
CATGAGTAAAAAAAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCG
CATAATAAATGCATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGC
GAAAATGCAAAATGATTAAAACAGATGAAGAAGCTAAGGCAAGGAAACACATTAGAAGCA
AACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCAA
GCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCTT
TCCCCATTGTGAAATTGTGCAACATTTCTCTCTCCTTCTTGATGGCACACTAGCAGGGCG
CCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTGTGTGCTCTCACTCCCACAT
TCAGTGAGTGATGTAACGAGACGAAATAAAACAGAAACAGAATAAACTGCAGAGCAAACG
TACACGCAAGGCAAGCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8793#0      AAAAAATCTGTTAGGTTGCTTGGAACAGGAAAACACAAAAATACACACTTATGGATATGT 60
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      ATAGGCTGTACACAGGTACACACAAAATCGAGACAAAACAAAACCTATCTACTATTCAAA 120
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      CCAACCCACAAACAACAACAACAACAACAACAAAAAAAAGAAAAAAAGAAAGAGAGAACA 180
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      --------------------------------------------CCGGGCGGGAGGGACA 16
                                                                                  

consensus_8793#0      TACGCGAAAGAAAGTAGCAAACACAAACAAGGAGAATAAAACACAAGCAAATTTAAGAAT 240
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      TGCATTGCTGGGAGGTTCTGTTTTCT-----GTTTTCCCTTTCCTTGTTTACTGTGATTT 71
                                                                                  

consensus_8793#0      TGGTAAGGGCACGGAACACAAGAACACGAATGTAGGTACAAACATATGTATGTACGGC-C 299
consensus_8793#2      ------------------CATGAGTAAAAAAAAAGAAACTAACAAACGAAACAGATAG-T 41
consensus_8793#1      CTGTGGCGGCTTGTATTGCACGGATAAGCTGTTAAAATGGATTTGATCCATCTTCGAAAC 131
                                        ** *   *       *      *    *   *          

consensus_8793#0      TTGCATGCATGTATATATGTATGTATGTATGTATAATATCGCGTCACTGTGCTGTGTTTA 359
consensus_8793#2      TCGCAAGCCATAATTACCGCATA-ATAAATGCATAATAGCGCA----------------A 84
consensus_8793#1      CCAAGTGTTCGATCGTCTGCGTGGGTGAGTGTGTATGAGTATGGATGTG----------A 181
                            *           *  *   *   **  **  *                     *

consensus_8793#0      AATGAATGTAACCTATTTCGTTGGTTTGTTTCCAAACTTTTTCATTTTCTTTTGAGAGCT 419
consensus_8793#2      AAGAAACACAAAC-ACAGAAACAGCTAGAGCGAAAGC----------------GAAAA-- 125
consensus_8793#1      AAAAAAAAAAAATGGACGAAACTGTTTTCATTTACTCT-----AACTTTGTGTATCAAAT 236
                      **  **   **            * *       *  *                   *   

consensus_8793#0      GCTGCAAAGCGAGCAAAAGA--AAGCAGAAGAAGCTAAGGCAAGGAAACACATTAGAAGC 477
consensus_8793#2      --TGCAAAATGATTAAAACA--GA--TGAAGAAGCTAAGGCAAGGAAACACATTAGAAGC 179
consensus_8793#1      TATTTAATGCTATCGTTACGTCAGGTTCTTTGTGCTGTGGTATTACTAAACGTTAAAACT 296
                        *  **    *     *               ***  ** *     * ** *** **  

consensus_8793#0      AAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCA 537
consensus_8793#2      AAACAAACCGAGCAAAAAGATGGGAGACGGAGGAGAGGAAGTAAAATGCTAAACAAAGCA 239
consensus_8793#1      ATAC---CCGAA-AACAATAGATTAAACGCGGGAGAGCAAGCAGTGAGAATACAATACCA 352
                      * **   ****  ** ** *    * ***  ****** *** *    *   *  * * **

consensus_8793#0      AGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCT 597
consensus_8793#2      AGCATATTTAGAAACATTAGATAGAAACATAGAATTATTTGTATCTCATCCCCTCTCCCT 299
consensus_8793#1      ACTATAACTGGAAGCCGAAATTATAATGTGAAAGACAACTAAATG-CATACGCTCAGCAA 411
                      *  ***  * *** *   *  ** **    * *   *  *  **  *** * ***  *  

consensus_8793#0      TTC---CCCATTGTGA-AATTGTGCAACATTTCTCTCTCACTCTCTCTCTCTCCTTCTTG 653
consensus_8793#2      TTC---CCCATTGTGA-AATTGTGCAACATTTCTCTCT--------------CCTTCTTG 341
consensus_8793#1      TACGGATTAAGTGTAACAACTAATTAACACCATCTTCT---------------TGTCGTT 456
                      * *      * *** * ** *    ****      ***                 ** * 

consensus_8793#0      ATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTG 713
consensus_8793#2      ATGGCACACTAGCAGGGCGCCTCCTTCGGTGCAGGAATTCGATTATAGTGTGTGTGTGTG 401
consensus_8793#1      GTTGTATTCTAATGCAGTGAACACGTGTGTGAGAGAA---------AGAGAGATTGAGT- 506
                       * * *  ***     * *    * *  ***   ***         ** * *  ** ** 

consensus_8793#0      TGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGA--GACGAAATAAAACAGAAACA 771
consensus_8793#2      TGTGCTCTCACTCCCACATTCAGTGAGTGATGTAACGA--GACGAAATAAAACAGAAACA 459
consensus_8793#1      TACGCAAAAAAGAAAGGATTAAATAAGCAAAGGAACAAACGAAAAACTAAACAACAAACA 566
                      *  **    *       *** * * **  * * *** *  **  ** ****  * *****

consensus_8793#0      GAATAAACTGCAG-AGCAAACGTACACGCAAGGCAAGCGAACATGTATTCACGAAAAACT 830
consensus_8793#2      GAATAAACTGCAG-AGCAAACGTACACGCAAGGCAAGCG--------------------- 497
consensus_8793#1      CAATAAAAGGTAACAACAGACATCAATACAACAAGAGTAAACGCTCTCTGTCATATAAAC 626
                       ******  * *  * ** ** *  *  ***    **                       

consensus_8793#0      TCGTTTTTCATTCGTCTCTTTTTTCTTGTGACGTTGCAAATCCAGATTAAAGAAACACGA 890
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ACACGCGCC---------------CGCACCACAGTGCA---CCAAGCTATAGGGAGCTAA 668
                                                                                  

consensus_8793#0      AAAAAAAAATAGTAATGGAAAATAAGTAACAAATAGATGGAGCAAAATAACAATAGACAA 950
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      AAAATCTGTTAGGTTGCTTGGAAAAGGGAAACACAAAAATACACACTTATGGATATGTAT 728
                                                                                  

consensus_8793#0      ATCTTGAGCGATTGATCAGCAGCAATAGCAACAGTTACACAGATACACAACAGTAACAGC 1010
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      AGGCTGTACACAGGTACACACAAAATCGAGGCAAAACAAAACCTATCTACTATTCAAACC 788
                                                                                  

consensus_8793#0      AAACATAAACCCGGACACAGACGGTTCTGACACACTCAGCTGCATCTTGTGACTCGTAAT 1070
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      AACCCACAAACAAATCCTTGAAAG---AGAATCTCGAAGCAGTACCGGCTAAAACAGAAC 845
                                                                                  

consensus_8793#0      TACGAACAGAAATAGTCAAAAATAAGGCGTTTAACAAGGGATGCGAAGAGGTACACAAAC 1130
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ACTAACGAAAGGTAGGAATAGATTAGTAGAAAAAAAAAAGATTTAACAAACAAAAAAAA- 904
                                                                                  

consensus_8793#0      ATACAAATAAATGAGATGTAACGTGCAAGAAGATAAGATTACCAAAAAATAATTTTAAGT 1190
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      -----AAAGAAAGAAACAGATCAAATGACATGTAAATCTTGCAAATTTGTAGTTTAAAAC 959
                                                                                  

consensus_8793#0      ATTTAAGGGATAAAGGAGATAACAAACAAAGGAAGAAAAAACACATACATGAGTAAAAAA 1250
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      AATGGCACGCCAAACAAGCAAGCCAAAATGCGGGAAACGAATACTTATTCCCGTTGTTTT 1019
                                                                                  

consensus_8793#0      AAAAGAAACTAACAAACGAAACAGATAGTTCGCAAGCCATAATTACCGCATAATAAATGC 1310
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      CCCC---CCCTGTTTACAATTCTCATCCCTTC---------------------------- 1048
                                                                                  

consensus_8793#0      ATAATAGCGCAAAAGAAACACAAACACAGAAACAGCTAGAGCGAAAGCGAAAATGCAAAA 1370
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      TGATTAAAACAGATGAAGAAAGAGTGAAAGCGAAGGCCGGAGATGGCAAGGGAGAATGAG 1430
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      CAACATTATGACACACACGTAAACTAACCAACATTTACGCAGAACAACAAAAGGATGCGT 1490
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      GTATGCTTAACACGAAGAGTGAACCATTGGAACAGAAAACGAAATAAATAATGATGGGGA 1550
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      AGAGAGATAGAGAGCGCGCGAGAGAGAGAGAAAGAGAGAGAAAGAGAAAGAGAAAGAGAG 1610
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      AGAGCGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGACAGTGGTAGAAAGATTGTGAGAA 1670
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      AGAGAGAGGACGAGGTAGAGAGACAAAAGAAGAAGTGTAGCGAAGAGCACGAAAGAGAAG 1730
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      CATACATTAAATGACTTCGAATAATTGCAATGATAGTTACGAGAGACAAAAGAAAGAAGA 1790
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      AAGCAAACAACAAAAAAGGAAAGATAAAAAAAAAAACAAAAGTACGCCTATCGTAGATTT 1850
consensus_8793#2      ------------------------------------------------------------
consensus_8793#1      ------------------------------------------------------------
                                                                                  

consensus_8793#0      GTGCTACGTACAAGTATATAAATCACTAA 1879
consensus_8793#2      -----------------------------
consensus_8793#1      -----------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)