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Anopheles gambiae
cluster # 8802 cluster # 8802       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8802#0 length = 1797 sequences # 9  
consensus_8802#1 length = 698 sequences # 1  
consensus_8802#2 length = 659 sequences # 1  
consensus_8802#3 length = 618 sequences # 1  

consensusID : consensus_8802#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1797
fasta sequence
                              [CCGAAACAAGTACCATGCCGTTGTGAAATTCGTACCGTGTGCGCGCAATTAAAGTACACACGCGTGACGAACGTTGACGTCGGCCGTCACCGTTCTGCACCGCCGTTAGCTGCGAGTG-TTTTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACC---GTTCGCTATGTTGTTCCTGACGAAAGTGC-CGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGGTAGTGTATGATAGTATTAAAACCTACAGCCCACCTAAACCGAGCACTGGCATTGGGAAATGGTTCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCACCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGAGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACACCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTGGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACTGTTCAAGGTGCTCTGCTCGCAGGAGAACGATATGATACGCCCGAAAACGTTTACCCATTTTGGAAGGAATATAACGTTCGCCAAAACCTGTGGCCAGGTGCTTGACAGTACATTTGATGAACTCTGTGATAAGCCACTCGGTGCAAGCGATTTCCTACAGATAGCACAATTCTTTCACACGGTACTGATACGCGATATCCCGCAATTGAACCTGAAGCTAAAATCCCAAACGAGACGATTCATCACGTTGATCGACACGCTTTACGATAGTCGCGTAAGGCTGGTCGTATCGGCGGACGTACCGTACAAGTATCTGTTTTCAAACGATGCTCCGGACGATATCCACACCTCGGACGAGCATCGTATGCTGATGGACGATCTCAAAATTACCAAGGATTCGACGGACGCCAGTTCGAACATTTTCACGGGTGAGGAAGAAGTATTCGCTTTCGAGCGGACAGTGTCGCGACTGGCCGAAATGCAGTCAGCCGAATACTGGACGCTATGGGAGAAGCACCGCTAGGTAGAACGATATTCAAATTTCGCGCCAGCATTGGGCCGAGTGTATAACGATGGGTACTTAAAATTTTGTGTGTAAATAATTGACGACCAGAAGGGGTTTTGTAGGCAAATTTTAAATCAATCTTAAAAAATAAACTAATATATTTATTCTTGCTTTTGCCGCAAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BM624783             [CCGAAACAAGTACCATGCCGTTGTGAAATTCGTACCGTGTGCGCGCAATTAAAGTACACACGCGTGACGAACGTTGACGTCGGCCGTCACCGTTCTGCACCGCCGTTAGCTGCGAGTG TTTTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACC   GTTCGCTATGTTGTTCCTGACGAAAGTGC CGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGGTAGTGTATGATAGTATTAAAACCTACAGCCCACCTAAACCGAGCACTGGCATTGGGAAATGGTTCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX607160             [                                                                           GACGTCGGCCGTCACCGTTCTGCACCGTCGTTAGCTGCGAGTGTTTTTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACCACTGTTCGCTATGTTGTTCCTGACGAAAGTGC CGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGGTAGTGTATGATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM604761             [                                                                                                                                                  ccgAGAACTTGACCCACATACCTGCGCCACTGACCACTGTTCGCTATGTTGTTCCTGACGAAAGTGCACGAGCTCGTTCTGCGTTCTGCTAAAACGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGCGAAGCTTAACCACGGTGAGATACAGCCCAATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGGTAGTGTATGATAGTATTAAAACCTACAGCCCACCTAAACCGAGCACTGGCATTGGGAAATGGTTCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCACCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGAGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACACCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM611700             [                                                                                                                                                                                                                                                                        ccgGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGAAGCTTAACCAAGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGGTAGTGTATGATAGTATTAAAACCTACAGCCCACCTAAACCGAGCACTGGCATTGGGAAATGGTTCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCACCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGAGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGGGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTGGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX611040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCGATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTGGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACTGTTCAAGGTGCTCTGCTCGCAGGAGAACGATATGATACGCCCGAAAACGTTTACCCATTTTGGAAGGAATATAACGTTCGCCAAAACCTGTGGCCAGGTGCTTGACAGTACATTTGATGAACTCTGTGATAAGCCACTCGGTGCAAGCGATTTCCTACAGATAGCACAATTCTTTCACACGGTACTGATACGCGATATCCCGCAATTGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX609907             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCGATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTGGTCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACTGTTCAAGGTGCTCTGCTCGCAGGAGAACGATATGATACGCCCGAAAACGTTTACCCATTTTGGAAGGAATATAACGTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGA283209            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAACTGTTCAAGGTGCTCTGCTCGCAGGAGAACGATATGATACGCCCGAAAACGTTTACCCATTTTGGAAGGAATATAACGTTCGCCAAAACCTGTGGCCAGGTGCTTGACAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM614593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgGGAATATAACGTTCGCCAAAACCTGTGGCCAGGTGCTTGACAGTACATTTGATGAACTCTGTGATAAGCCACTCGGTGCAAGCGATTTCCTACAGATAGCACAATTCTTTCACACGGTACTGATACGCGATATCCCGCAATTGAACCTGAAGCTAAAATCCCAAACGAGACGATTCATCACGTTGATCGACACGCTTTACGATAGTCGCGTAAGGCTGGTCGTATCGGCGGACGTACCGTACAAGTATCTGTTTTCAAACGATGCTCCGGACGATATCCACACCTCGGACGAGCATCGTATGCTGATGGACGATCTCAAAATTACCAAGGATTCGACGGACGCCAGTTCGAACATTTTCACGGGTGAGGAAGAAGTATTCGCTTTCGAGCGGACAGTGTCGCGACTGGCCGAAATGCAGTCAGCCGAATACTGGACGCTATGGGAGAAGCACCGCTAGGTAGAACGATATTCAAATTTCGCGCCAGCATTGGGCCGAGTGTATAACGATGGGTACTTAAAATTTTGTGTGTAAATAATTGACGACCAGAAGGGGTTT                                                                                                  ]
[-] EMBL AGA281620            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CACGGTACTGATACGCGATATCCCGCAATTGAACCTGAAGCTAAAATCCCAAACGAGACGATTCATCACGTTGATCGACACGCTTTACGATAGTCGCGTAAGGCTGGTCGTATCGGCGGACGTACCGTACAAGTATCTGTTTTCAAACGATGCTCCGGACGATATGCACACCTCGGACGAGCATCGTATGCTGATGGACGATCTCAAAATTACCAAGGATTCGACGGACGCCAGTTCGAACATTTTCACGGGTGAGGAAGAAGTATTCGCTTTCGAGAGGACAGTGTCGCGACTGGCTGAAATGCAGTCCGCCGAATACTGGACGCTGTGGGAGAAGCACCGCTAGGTAGAACGATATTCAAATTTCGCGCCAGCATTGGGCCGAGTGTATAACGATGGGTACTTAAAATTTTGTGTGTAAATAATTGACGACCAGAAGGGGTTTTGTAGGCAAATTTTAAATCAATCTTAAAAAATAAACTAATATATTTATTCTTGCTTTTGCCGCAAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8802#0 CCGAAACAAGTACCATGCCGTTGTGAAATTCGTACCGTGTGCGCGCAATTAAAGTACACA CGCGTGACGAACGTTGACGTCGGCCGTCACCGTTCTGCACCGCCGTTAGCTGCGAGTGTT TTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACC GTTCGCTATGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAG CTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGC CACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAA GGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGC CCTGCAGGTAGTGTATGATAGTATTAAAACCTACAGCCCACCTAAACCGAGCACTGGCAT TGGGAAATGGTTCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCACCCAAGGGACTGTA CATCTACGGCAGCGTCGGCGGAGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTG TGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACACCAA AATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTT CGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGA TGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCT CTTCAATAACGGCGTGATAGTGGTGGCCACCAGCAACCGTGCCCCCGACGATCTGTACAA AAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAA CATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAA ACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACTGTT CAAGGTGCTCTGCTCGCAGGAGAACGATATGATACGCCCGAAAACGTTTACCCATTTTGG AAGGAATATAACGTTCGCCAAAACCTGTGGCCAGGTGCTTGACAGTACATTTGATGAACT CTGTGATAAGCCACTCGGTGCAAGCGATTTCCTACAGATAGCACAATTCTTTCACACGGT ACTGATACGCGATATCCCGCAATTGAACCTGAAGCTAAAATCCCAAACGAGACGATTCAT CACGTTGATCGACACGCTTTACGATAGTCGCGTAAGGCTGGTCGTATCGGCGGACGTACC GTACAAGTATCTGTTTTCAAACGATGCTCCGGACGATATCCACACCTCGGACGAGCATCG TATGCTGATGGACGATCTCAAAATTACCAAGGATTCGACGGACGCCAGTTCGAACATTTT CACGGGTGAGGAAGAAGTATTCGCTTTCGAGCGGACAGTGTCGCGACTGGCCGAAATGCA GTCAGCCGAATACTGGACGCTATGGGAGAAGCACCGCTAGGTAGAACGATATTCAAATTT CGCGCCAGCATTGGGCCGAGTGTATAACGATGGGTACTTAAAATTTTGTGTGTAAATAAT TGACGACCAGAAGGGGTTTTGTAGGCAAATTTTAAATCAATCTTAAAAAATAAACTAATA TATTTATTCTTGCTTTTGCCGCAAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_8802#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence
                              [CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACTGTTCAAGGTGCTCTGCT]

[+] EMBL BM646485             [CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACTGTTCAAGGTGCTCTGCT]


>consensus_8802#1 CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTC GTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCAG CAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGGCGGTGGCAAAACGATGCT CATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTC CTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGC GAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCA GGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGAT CTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAA CCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCAT CGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCAC GGCGGCGCTAAAGGGGGAAAGTAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGC GAACGCTTCGATGGACAAACTGTTCAAGGTGCTCTGCT



consensusID : consensus_8802#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence
                              [CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGCACCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATT]

[+] EMBL BM622309             [CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGCACCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATT]


>consensus_8802#2 CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTC GTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCAG CAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGCACCCAAGGGACTGTACATCTA CGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGAT TGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCA CGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACCGTTCGACCC AATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTTCGATGAATT TCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTATCTCTTCAA TAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTACAAAAATGG GCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTGCAACATCGT AACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAGTAAACATT



consensusID : consensus_8802#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence
                              [CCGCGTTGACGTCGGCCGTCACCGTTCTGCACCGTCGTTAGCTGCGAGTGTTTTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACCACTGTTCGCTATGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCATCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGGGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATT]

[+] EMBL BM602170             [CCGCGTTGACGTCGGCCGTCACCGTTCTGCACCGTCGTTAGCTGCGAGTGTTTTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACCACTGTTCGCTATGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCATCCAAGGGACTGTACATCTACGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATCAAATCGAAACATGTGCGGGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAGCCTGTTGCCGAGCTGATT]


>consensus_8802#3 CCGCGTTGACGTCGGCCGTCACCGTTCTGCACCGTCGTTAGCTGCGAGTGTTTTTTCTTC CCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACCACTGTTCG CTATGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCGCAGCTGCT CGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCACCGCCACCG CCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCTGAAGGAGA AGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGAAGCCCTGC AGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCATCCAAGGGACTGTACATCTACGGCAGC GTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTGCTGTGCGATTGATCGA AAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGCCAAAATTCACGACATC AAATCGAAACATGTGCGGGATGCGAGCAACAGCAAGCCACAACCGTTCGACCCAATTAAG CCTGTTGCCGAGCTGATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8802#0      CCGAAACAAGTACCATGCCGTTGTGAAATTCGTACCGTGTGCGCGCAATTAAAGTACACA 60
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      CGCGTGACGAACGTTGACGTCGGCCGTCACCGTTCTGCACCGCCGTTAGCTGCGAGTGTT 120
consensus_8802#3      --------CCGCGTTGACGTCGGCCGTCACCGTTCTGCACCGTCGTTAGCTGCGAGTGTT 52
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      TTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACC 180
consensus_8802#3      TTTTCTTCCCATTCTTACATAATATGCAAGAACTTGACCCACATACCTGCGCCACTGACC 112
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      ---GTTCGCTATGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCG 237
consensus_8802#3      ACTGTTCGCTATGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCG 172
consensus_8802#1      ---------CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCG 51
consensus_8802#2      ---------CCGGTTGTTCCTGACGAAAGTGCCGAGCTCGTTCTGCGTTCTGCTAAAGCG 51
                                  ************************************************

consensus_8802#0      CAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCAC 297
consensus_8802#3      CAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCAC 232
consensus_8802#1      CAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCAC 111
consensus_8802#2      CAGCTGCTCGTGCCCCGTAATACATGGCGTACGGCCGTACAGTCCCAACGCTCCCGCCAC 111
                      ************************************************************

consensus_8802#0      CGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCT 357
consensus_8802#3      CGCCACCGCCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGTCGAGCTGCT 292
consensus_8802#1      CGCCA---CCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCG---------- 158
consensus_8802#2      CGCCA---CCAGCAGCGGATCGCCCGTGTCCGCCGTGGGGAAGACGCCCGC--------- 159
                      *****   ******************************************          

consensus_8802#0      GAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGA 417
consensus_8802#3      GAAGGAGAAGCTTAACCACGGTGAGATACAGCCCGATCCGCACCAGGTTCGCGTCACCGA 352
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      AGCCCTGCAGGTAGTGTATGATAGTATTAAAACCTACAGCCCACCTAAACCGAGCACTGG 477
consensus_8802#3      AGCCCTGCAG-------------------------------------------------- 362
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      CATTGGGAAATGGTTCAGCTTCGGCAGGGCGGAGAAGGCGGTGGCCGCACCCAAGGGACT 537
consensus_8802#3      ------------------CTTCGGCAGGGCGGAGAAGGCGGTGGCCGCATCCAAGGGACT 404
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------ACCCAAGGGACT 171
                                                                                  

consensus_8802#0      GTACATCTACGGCAGCGTCGGCGGAGGCAAAACGATGCTCATGGACATGTTCTACGACTG 597
consensus_8802#3      GTACATCTACGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTG 464
consensus_8802#1      -----------------TCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTG 201
consensus_8802#2      GTACATCTACGGCAGCGTCGGCGGTGGCAAAACGATGCTCATGGACATGTTCTACGACTG 231
                                       ******* ***********************************

consensus_8802#0      CTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACAC 657
consensus_8802#3      CTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGC 524
consensus_8802#1      CTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGC 261
consensus_8802#2      CTGTGCGATTGATCGAAAGCGACGTGTGCACTTCAACTCCTTCATGACCGACGTGCACGC 291
                      ********************************************************** *

consensus_8802#0      CAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACC 717
consensus_8802#3      CAAAATTCACGACATCAAATCGAAACATGTGCGGGATGCGAGCAACAGCAAGCCACAACC 584
consensus_8802#1      CAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACC 321
consensus_8802#2      CAAAATTCACGACATCAAATCGAAACATGTGCGAGATGCGAGCAACAGCAAGCCACAACC 351
                      ********************************* **************************

consensus_8802#0      GTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTT 777
consensus_8802#3      GTTCGACCCAATTAAGCCTGTTGCCGAGCTGATT-------------------------- 618
consensus_8802#1      GTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTT 381
consensus_8802#2      GTTCGACCCAATTAAGCCTGTTGCCGAGCTGATTACCCAGGACTCGTGGATGATTTGCTT 411
                      **********************************                          

consensus_8802#0      CGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTA 837
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      CGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTA 441
consensus_8802#2      CGATGAATTTCAGGTTACCGACATAGCGGACGCAATGATCTTGAAACGGCTGTTCACTTA 471
                                                                                  

consensus_8802#0      TCTCTTCAATAACGGCGTGATAGTGGTGGCCACCAGCAACCGTGCCCCCGACGATCTGTA 897
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      TCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTA 501
consensus_8802#2      TCTCTTCAATAACGGCGTGATAGTGGTAGCCACCAGCAACCGTGCCCCCGACGATCTGTA 531
                                                                                  

consensus_8802#0      CAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTG 957
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      CAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTG 561
consensus_8802#2      CAAAAATGGGCTGCAGCGTAGCAACTTTGTGCCGTTCATCGGAGTGCTGAAGAATCACTG 591
                                                                                  

consensus_8802#0      CAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAG 1017
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      CAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAG 621
consensus_8802#2      CAACATCGTAACGCTCGACAGTGGCGTTGATTATCGCACGGCGGCGCTAAAGGGGGAAAG 651
                                                                                  

consensus_8802#0      TAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACT 1077
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      TAAACATTACTTTGACAAATCCCAAGGCGCAAGCGATGCGAACGCTTCGATGGACAAACT 681
consensus_8802#2      TAAACATT---------------------------------------------------- 659
                                                                                  

consensus_8802#0      GTTCAAGGTGCTCTGCTCGCAGGAGAACGATATGATACGCCCGAAAACGTTTACCCATTT 1137
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      GTTCAAGGTGCTCTGCT------------------------------------------- 698
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      TGGAAGGAATATAACGTTCGCCAAAACCTGTGGCCAGGTGCTTGACAGTACATTTGATGA 1197
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      ACTCTGTGATAAGCCACTCGGTGCAAGCGATTTCCTACAGATAGCACAATTCTTTCACAC 1257
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      GGTACTGATACGCGATATCCCGCAATTGAACCTGAAGCTAAAATCCCAAACGAGACGATT 1317
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      CATCACGTTGATCGACACGCTTTACGATAGTCGCGTAAGGCTGGTCGTATCGGCGGACGT 1377
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      ACCGTACAAGTATCTGTTTTCAAACGATGCTCCGGACGATATCCACACCTCGGACGAGCA 1437
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      TCGTATGCTGATGGACGATCTCAAAATTACCAAGGATTCGACGGACGCCAGTTCGAACAT 1497
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      TTTCACGGGTGAGGAAGAAGTATTCGCTTTCGAGCGGACAGTGTCGCGACTGGCCGAAAT 1557
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      GCAGTCAGCCGAATACTGGACGCTATGGGAGAAGCACCGCTAGGTAGAACGATATTCAAA 1617
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      TTTCGCGCCAGCATTGGGCCGAGTGTATAACGATGGGTACTTAAAATTTTGTGTGTAAAT 1677
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      AATTGACGACCAGAAGGGGTTTTGTAGGCAAATTTTAAATCAATCTTAAAAAATAAACTA 1737
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  

consensus_8802#0      ATATATTTATTCTTGCTTTTGCCGCAAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1797
consensus_8802#3      ------------------------------------------------------------
consensus_8802#1      ------------------------------------------------------------
consensus_8802#2      ------------------------------------------------------------
                                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)