These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8807#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1489 fasta sequence [CCGCCCACGCGTCCGCACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCAATCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATAGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGAGTTTCTGCAGGGCGACGAGCTGCGCAACGCGTGTCAATTGCTGGACGAGCGGCGCAACGAGCTGGCGGTGCCGCTGCTCGAGAACTGCTTCCGGCTGCTGAACAAAATCTTTCTGGACAAATCGAAGTGTGTGCTGCTGCTGCTGTGCCGGCTGGTGGCTGCCTGCACTACCTCACCGATACCGCACCCGTCCGCGGAACAGTGGGCCGAGCTGGCGCTGCGCCGGTACGAGCACGTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCAGACGTGTCTGCATCTCTGGTGGCAGCGGGGCCGCGACCGTACCTTGCTTGAGGAGCGGCTGAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGACCGACCCTTGCCCAGGCCATACACGCGTTGGATCCACGGGCGGAGACGATCTAACCCCAACCCAAGCAAGCAAGCAAGCAAGCATACAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATCAAACCTTTACATCACACAAACGATGAGACTAAGCTTTTCCATCTGTTTTTCGTTGTAATTTTATTCGTCCGTCTTAGGTTAAAAACACATTTAGTTGGGGTTGTTTTTTTTTTATTTAGTATATTTAGTATTTTCATAGTGCAAAAAGGGTGCGCTTTTAACGCTTGTCGGCGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTACTTTCGCAAT] [+] EMBL BM644916 [CCGCCCACGCGTCCGCACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCAATCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATAGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCC ] [+] EMBL AGA281183 [ GTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGAGTTTCTGCAGGGCGACGAGCTGCGCAACGCGTGTCAATTGCTGGACGAGCGG ] [+] EMBL AGA283436 [ GTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGA ] [+] EMBL BM613104 [ ccgGATGGGGAACTTTACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGAGTTTCTGCAGGGCGACGAGCTGCGCAACGCGTGTCAATTGCTGGACGAGCGGCGCAACGAGCTGGCGGTGCCGCTGCTCGAGAACTGCTTCCGGCTGCTGAACAAAATCTTTCTGGACAAATCGAAGTGTGTGCTGCTGCTGCTGTGCCGGCTGGTGGCTGCCTGCACTACCTCACCGATACCGCACCCGTCCGCGGAACAGTGGGCCGAGCTGGCGCTGCGCCGGTACGAGCACGTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCAGACGTGTCTGCATCTCTGGTGGCAGCGGGGCCGCGACCGTACCTTGCTTGAGGAGCGGCTGAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGACCGACCCTTGCCCAGGCCATACACGCGTTGGATCCACGGGCGGAGACGATCTAACCCCAACCCAAGCAAGCAAGCAAGCAAGCATACAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATCAAACCTTTACAT ] [-] EMBL AGA284732 [ GTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCAGACGTGTCTGCATCTCTGGTGCCAGCGGGCCCGCGACCGTACCCTGCTGGAGGAGCGGCTGAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGGCCGACCCTTGCCCAGGCCATACACGCGTTGGATCCGCGGGCGGAGACGATCTAACCCCAGCCCAAGCAAGCAAGCAAGCAAG CAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATGAAACCTTTACATCACACAAACGATGAGACTAAGCTTTTCCATCTGTTTTTCGTTGTAATTTTATTCGTCCGTCTTAGGTTAAAAACACATTTAGTTGGGGTTGTTTTTTTTTTATTTAGTATATTTAGTATTTTCATAGTGCAAAAAGGGTGCGCTTTTAACGCTTGTCGGCGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTACTTTCGCAAT] consensusID : consensus_8807#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1023 fasta sequence [GAATNGCCCCGAGGTTAAATGCGACGCACTTACCTGCTCATACGCGCTTCGTTTCTTTTGCAGACATTTGGCAACGGCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTACCGCTACGCACGCATACTACCCACGGATACGGCAGCAGCGATAGACAGCCAGTGTCTGGCTGGCTGCCGGCAAAAAGTCGTCATATACGAGGTAAACTGTGCTGTGNAGTGATGGCCCCTGGGCCTGGACCCGTACCCGACAGCNGTCTGAGCGGCTGCTACACCCAATATCCTGAAGCTGTACGAATGTGGCCTGCGGAAGGATCAGCCGACCAGACTGCAGACTGGTCTGCTATACCCGAAGAAGGTNGCTGATGGGGCAACTTTACAGGCACGAGCTGATCGGTGAGCGNCAGTNGCCGCGTTTCTGAGCTNGCTTCCTCGACCACTATCGTAACCGTGCCTTCGCTTGCGGCTAGAATATCNACCACAATAATCCCCTGGGCCAGTATATCAGCNNACGAGGCACGCAACAGCANAGCTAGACGGCCACACACGCCGTGTCCANATNTGCCTTGGACGCANNCGGGTCGGCANACACGGAGGCTTAGGNCNGGTAGCCCAGCCTTGACTCGANAAACNTGCCTTACCGAGNGCCTTGCCTTGGAAACCACACNAACTCCTACTCCTTGAGAGCCAAAAATCCGGAAAGNTGATGTTGCAATGGCATGACATGACATTGCTGCCCCGGCGGNTGGCNTGGGNCCGCCCCTNGCTAACAAAACCTTCCACCGGAACTACCCCGGCCACTTCNGGTCCCGGCNTGGGACCCAGCTGNGNGCCCGNANTCCGTGACGCCCTGCGTGCCGCGCGCGTACCGCNGCGAACCGCTGATGCNGCACCTCCCGGTCGCCTGCNTGNCTGTCCTGGTACCCATTCCCGCCGTGGCTGNCCGGCCCTNTGTCCNGGCCNACTCNTGTGCTGTCGCCGCCCGCGCCCCCGCCACGCGNAG] [+] EMBL AL930518 [GAATNGCCCCGAGGTTAAATGCGACGCACTTACCTGCTCATACGCGCTTCGTTTCTTTTGCAGACATTTGGCAACGGCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTACCGCTACGCACGCATACTACCCACGGATACGGCAGCAGCGATAGACAGCCAGTGTCTGGCTGGCTGCCGGCAAAAAGTCGTCATATACGAGGTAAACTGTGCTGTGNAGTGATGGCCCCTGGGCCTGGACCCGTACCCGACAGCNGTCTGAGCGGCTGCTACACCCAATATCCTGAAGCTGTACGAATGTGGCCTGCGGAAGGATCAGCCGACCAGACTGCAGACTGGTCTGCTATACCCGAAGAAGGTNGCTGATGGGGCAACTTTACAGGCACGAGCTGATCGGTGAGCGNCAGTNGCCGCGTTTCTGAGCTNGCTTCCTCGACCACTATCGTAACCGTGCCTTCGCTTGCGGCTAGAATATCNACCACAATAATCCCCTGGGCCAGTATATCAGCNNACGAGGCACGCAACAGCANAGCTAGACGGCCACACACGCCGTGTCCANATNTGCCTTGGACGCANNCGGGTCGGCANACACGGAGGCTTAGGNCNGGTAGCCCAGCCTTGACTCGANAAACNTGCCTTACCGAGNGCCTTGCCTTGGAAACCACACNAACTCCTACTCCTTGAGAGCCAAAAATCCGGAAAGNTGATGTTGCAATGGCATGACATGACATTGCTGCCCCGGCGGNTGGCNTGGGNCCGCCCCTNGCTAACAAAACCTTCCACCGGAACTACCCCGGCCACTTCNGGTCCCGGCNTGGGACCCAGCTGNGNGCCCGNANTCCGTGACGCCCTGCGTGCCGCGCGCGTACCGCNGCGAACCGCTGATGCNGCACCTCCCGGTCGCCTGCNTGNCTGTCCTGGTACCCATTCCCGCCGTGGCTGNCCGGCCCTNTGTCCNGGCCNACTCNTGTGCTGTCGCCGCCCGCGCCCCCGCCACGCGNAG] consensusID : consensus_8807#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 721 fasta sequence [AGATCCCGNGGTTAAATTGCGTGAAGCAAGTTCGACTCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGACGCAAAGTGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCTTGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAACATTTGGCAACCGGCCCACTAGACGACCGCTGCCGAATACTGGCGATGTANTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCANCGATGGACAGTCAGATGTCGGCGGCGCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCGGACACCGTACCGACAGANGTCGAGCGGGCTACACCACTTCCTGAAGCTGTACGAGAGGGCTGCGGAAGGATCAGCCGCCCANCTGCAGACGGTCTGTTCCCGAAGAAGTGCTGATGGGGAAATTTACGCGAGCTGATCGGTGAGACGCAGGCGG] [+] EMBL AL692630 [AGATCCCGNGGTTAAATTGCGTGAAGCAAGTTCGACTCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGACGCAAAGTGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCTTGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAACATTTGGCAACCGGCCCACTAGACGACCGCTGCCGAATACTGGCGATGTANTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCANCGATGGACAGTCAGATGTCGGCGGCGCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCGGACACCGTACCGACAGANGTCGAGCGGGCTACACCACTTCCTGAAGCTGTACGAGAGGGCTGCGGAAGGATCAGCCGCCCANCTGCAGACGGTCTGTTCCCGAAGAAGTGCTGATGGGGAAATTTACGCGAGCTGATCGGTGAGACGCAGGCGG] consensusID : consensus_8807#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence [CCGACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCGATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGCCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTAGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTTACAGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCT] [+] EMBL BM606716 [CCGACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCGATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGCCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTAGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATG ] [+] EMBL BM650518 [ ccgGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATAGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTTACAGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCT] consensusID : consensus_8807#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence [GGGCCGTTCTGTGTTATCAGAAATTAAAAATAAACAAGGGATTACACAATTTCTAAGCAATATTCCATACAGTAATCGTTTAAATGTTTACAGTTGGTGGTTTTGACAAGTGTCCCCATTCCTTTTACAAATAAGGGAAGCGAAATCACCTTCATCGGTGGTGCATACCCGTGCATCACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCNATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTANAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCANCGCNACGGAAGCGTTTG] [+] EMBL BX628030 [GGGCCGTTCTGTGTTATCAGAAATTAAAAATAAACAAGGGATTACACAATTTCTAAGCAATATTCCATACAGTAATCGTTTAAATGTTTACAGTTGGTGGTTTTGACAAGTGTCCCCATTCCTTTTACAAATAAGGGAAGCGAAATCACCTTCATCGGTGGTGCATACCCGTGCATCACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCNATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTANAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCANCGCNACGGAAGCGTTTG] consensusID : consensus_8807#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence [GANNTGAATAGCTCAGGGCACGAATCCGCACGANNGCAGCATACTACCCACCGGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGGCGGCCGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGACCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCAGCCGCGCGAGCTGATCGGTGAGCGCAGTGCCAGCGTTNCGAGTGCGTTNCTCGACCATATCGTAANCACGGTGCC] [+] EMBL BX466516 [GANNTGAATAGCTCAGGGCACGAATCCGCACGANNGCAGCATACTACCCACCGGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGGCGGCCGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGACCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCAGCCGCGCGAGCTGATCGGTGAGCGCAGTGCCAGCGTTNCGAGTGCGTTNCTCGACCATATCGTAANCACGGTGCC] consensusID : consensus_8807#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence [CTTAGGTTAAAAACCCATTTAGTTGGGGTTGTTTTTTTTTAAATTAGTATATTTAATATTTTCATAGGGCAAAACAATGGGGCGCTTTTAACGCTTGTCGGGGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTTTTACTTTCGCTATTGGGATCGGGATTGTTGGAGCTATTTGTAGAAGAGAGAATTTTTAGAAGGCAAACGTTTAACTATCCATTTACTTTTATTTGTCCCAGGCTTGGCCAATTTTATAAATAAATTATGGGA] [-] EMBL BM630340 [CTTAGGTTAAAAACCCATTTAGTTGGGGTTGTTTTTTTTTAAATTAGTATATTTAATATTTTCATAGGGCAAAACAATGGGGCGCTTTTAACGCTTGTCGGGGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTTTTACTTTCGCTATTGGGATCGGGATTGTTGGAGCTATTTGTAGAAGAGAGAATTTTTAGAAGGCAAACGTTTAACTATCCATTTACTTTTATTTGTCCCAGGCTTGGCCAATTTTATAAATAAATTATGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 CCGCCCACGCGTCCGCACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATA 60 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 -------CCGACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCGA 53 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 AATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCTCCCACTGCACCGCAAAGCCATTG 120 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 TCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGA 113 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 TTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGG 180 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 CATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAA 173 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 AATAAAC-CATCCAATCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAA 239 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ---------------------------GAATNGCCCCGAGGTTAAA---TGCGACGCACT 30 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 CGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAG 233 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ---------------------------------------------------GGGCCGTTC 9 consensus_8807#0 CGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAG 299 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 TAC-CTGCTCAT------ACGCGCTTCGTTTCTTTTGCA-GACATTTGGCAACGGCC-AC 81 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 TACGTTGAGCATGAAGCAACAAACCAAGGCCACCGTGCAAGACATTTGGCAACGGCCCAC 293 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 TGTGTTATCAGAAATTAAAAATAAACAAGGGATTACACA-ATTTCTAAGCAATATTCCAT 68 consensus_8807#0 TACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCAC 359 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 TAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTACCGCTACGCA 141 consensus_8807#5 -----------------------GANNTGAATAGCTCAGGGCACGAATCCGCACGANNGC 37 consensus_8807#3 TAGACGACCGCTGCCGAATGCTGGCGATGTAGTGCTGTGCTTCGAGATT-CCGCT-CGCA 351 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ACAGTAATCGTT--TAAATGTTTACAGT-TGGTGGTTTTGACAAGTGTCCCCATTCCTTT 125 consensus_8807#0 TAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATT-CCGCT-CGCA 417 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 CGCATACTACCCACGGATA-CGGCAGC-AGCGATAGACAGCCAGTGTCTGGCTGGCTGCC 199 consensus_8807#5 AGCATACTACCCACCGGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGG--CGGCCGCC 95 consensus_8807#3 CGCATACTACCCACCGG-ATCGGCAGCCAGCGATGGACAGCCAGTGTCGG--CGGCTGCC 408 consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 TACAAATAAGGGAAGCGAAATCACCTTCATCGGTGGTGCATACCCGTGCA--TCACTTCC 183 consensus_8807#0 CGCATACTACCCACCGG-ATCGGCAGCCAGCGATAGACAGCCAGTGTCGG--CGGCTGCC 474 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 GGCAAAAAGT-CGTCATATACGAGGTAAACTGTGCTGTGNAGTGATGGCCCCTGGGCCTG 258 consensus_8807#5 GGCAAAAAGTACGTCATATACGAGGTAAACG----TGCGGAAGGATGGCCCCGGG--CCG 149 consensus_8807#3 GGCAAAAAGTACGTCATATACGAGGTAAACG----TGCGGAAGGATGGCCCCGGG--CCG 462 consensus_8807#2 ---------A-----GATCCCGNGGTTAAAT----TGCGTGAAGCAAGTTCGACT----- 37 consensus_8807#4 TGCTTTCAGT-----GCCTGCGAGAATAGAT----TGCGTGAAGCAAGTTCNA-T----- 228 consensus_8807#0 GGCAAAAAGTACGTCATATACGAGGTAAACG----TGCGGAAGGATGGCCCCGGG--CCG 528 consensus_8807#6 -------------------CTTAGGTTAAAAA---CCCATTTAGTTGGGGTTGTT----- 33 * * * * consensus_8807#1 GACCCGTACCCGACAGCNGTCTGAGCGGCTGCTACACC-CAATATCCTGAAGCTGTACGA 317 consensus_8807#5 GACCCGTACCCGACCAGCGTC-GAGCGGC-GCTACACC-CACT-TCCTGAAGCTGTACGA 205 consensus_8807#3 GACCCGTACCCGACCAGCGTC-GAGCGGC-GCTACACC-CACT-TCCTGAAGCTGTACGA 518 consensus_8807#2 -CCCCAGTTCGGACGGAGGTG-GAACAGCTGTGATA----GTGCTAGGGAAGCTGCAGGA 91 consensus_8807#4 -CCCCAGTTCGGACGGAGGTG-GAACAGCTGTGATA----GTGCTAGGGAAGCTGCAGGA 282 consensus_8807#0 GACCCGTACCCGACCAGCGTC-GAGCGGC-GCTACACC-CACT-TCCTGAAGCTGTACGA 584 consensus_8807#6 ---TTTTTTTAAATTAGTATATTTAATATTTTCATAGGGCAAAACAATGGGGCGCTTTTA 90 * * * * * ** * consensus_8807#1 ATGTGGCCTGCGGAAGGATCAG-CCGACCAGACTGCAGACTGGTCTGCTATACCCGAAGA 376 consensus_8807#5 A---GGGCTGCGGAAGGATCAGACCCGCCCAGCTGCAGAC-GGTCTGCT--TCCCGAAGA 259 consensus_8807#3 A---GGGCTGCGGAAGGATCAG-CCCGCCCAGCTGCAGAC-GGTCTGCT--TCCCGAAGA 571 consensus_8807#2 A---CGGACATACACACATCGGATGCAAGTGGGTGTTGAC-GCAAAGTGTTGTCTATAAA 147 consensus_8807#4 A---CGGACATACACACATCGGATGCAAGTGGGTGTTGAA-GCAAAGCGTTGTCTATAAA 338 consensus_8807#0 A---GGGCTGCGGAAGGATCAG-CCCGCCCAGCTGCAGAC-GGTCTGCT--TCCCGAAGA 637 consensus_8807#6 A---CGCTTGTCGGGGTA-CATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTTTTA 146 * * * * * * consensus_8807#1 AGGTNGCTGATGGGGCAACTT----TACAGGCACGAGCTGATCGGTGAG--CGNCAGTNG 430 consensus_8807#5 AGGTG-CTGATGGGG-AACTT----CAGCCGCGCGAGCTGATCGGTGAG--CGC-AGTGC 310 consensus_8807#3 AGGTG-CTGATGGGG-AACTT----TACAGC--CGAGCTGATCGGTGAG--CGC-AGTG- 619 consensus_8807#2 TGGCC-CCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGT 206 consensus_8807#4 TGGCC-CCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGT 397 consensus_8807#0 AGGTG-CTGATGGGG-AACTT----CACCGC--CGAGCTGATCGGTGAG--CGC-AGTG- 685 consensus_8807#6 CTTTCGCTATTGGGATCGGGATTGTTGGAGCTATTTGTAGAAGAGAGAATTTTTAGAAGG 206 * * * * * * consensus_8807#1 CCG-CGTTTCTGAGCTNGCTTCCTCGACCACTATCGTAACCGTGCCTTCGC-TTGCGGCT 488 consensus_8807#5 CAG-CGTTNC-GAGTGCG-TTNCTCGACCA-TATCGTAANCACGGTGCC----------- 355 consensus_8807#3 CCG-CGTTC--GAG--TGCTTTCTCGACCA-TATCGTAACCGTGCCTTCGC-T------- 665 consensus_8807#2 TTA-TGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAAT 265 consensus_8807#4 TTA-TGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAAT 456 consensus_8807#0 CCG-CGTTC--GAG--TGCTTTCTCGACCA-TATCGTAACCGTGCCTTCGCTGCGTGATT 739 consensus_8807#6 CAAACGTTTAACTATCCATTTACTTTTATTTGTCCCAGGCTTGGCCAATTT--TATAAAT 264 *** * * consensus_8807#1 AGAATATCNACCACAATAATCCCCTGGGCCAGTATATCAGCNNACGAGGCACGCAACAGC 548 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 AAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGC--GTAGAATGGCCTTGGAGAACG 323 consensus_8807#4 AAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGC--GTANAATGGCCATGGAGAACG 514 consensus_8807#0 CGCCCCACT-TCCTGGAGTTTCTGCAGGGCGACGAGCT-GCGCAACGCGTGTCAATTGCT 797 consensus_8807#6 AAATTATGGGA------------------------------------------------- 275 consensus_8807#1 ANAGCTAGACGGCCACACACGCCGTGTCCANATNTGCCTTGGACGCANNCGGGTCGGCAN 608 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 GGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAACA 383 consensus_8807#4 GGACGGAATCCATCGAGGACGATCTGGATAGCANCGCNACGGAAGCGTTTG--------- 565 consensus_8807#0 GGACGAGCGGCGCAACGAGCTGGCGGTGCCGCTGCTCGAGAACTGCTTCCGGCTG---CT 854 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ACACGGAGGCTTAGGNCNGGTAGCCCAGCCTTGACTCGANAAACNTGCCTTACCGAGNGC 668 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 TTTGGCAACCGGCCCACTAGACGACCGCTGCCGAATACTGGCGATGTANTGCTGTGCTTC 443 consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 GAACAAAATCTTTCTGGACAAATCGAAGTGTGTGCTGCTGCTGCTGTGCCGGCTGGTGGC 914 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 CTTGCCTTGGAAACCACACNAACTCCTACTCCTTGAGAGCCAAAAATCCGGAAAGNTGAT 728 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 GAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCANCGATGGACAGTCAGAT 503 consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 TGCCTGCACTACCTCACCGATACCGCACCCGTCCGCGGAACAGTGGGCCGAGCTGGCGCT 974 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 GTTGCAATGGCATGACATG-ACATTGCTGCCCCGGCGGNTGGCNTGGGNCCGCCCCTNGC 787 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 GTCGGCGGCGCGGCAAAAA-GTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCC 562 consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 GCGCCGGTACGAGCACGTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCA 1034 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 TAACAAAACCTTCCACCGGAACTACCCCGGCCACTTCNGGTCCCGGCNTGGGACCCAGCT 847 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 GGGCGGACACCGTACCGACAGANGTCGAGCGGGCTACACCACTTCCTGAAGCTGTACGAG 622 consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 GACGTGTCTGCATCTCTGGTGGCAGCGGGGCCGCGACCGTACCTTGCTTGAGGAGCGGCT 1094 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 GNGNGCCCGNANTCCGTGACGCCCTGCGTGCCGCGCGCGTACCGCNGCGAACCGCTGATG 907 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 AGGGCTGCGGAAGGATCAGCCGCCCANCTGCAGACGGTCTGTTCCCGAAGAAGTGCTGAT 682 consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 GAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGACCGACCCTTGCCCAGGCCAT 1154 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 CNGCACCTCCCGGTCGCCTGCNTGNCTGTCCTGGTACCCATTCCCGCC-GTGGCTGNCCG 966 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 GGGGAAATTTACGCGAGCTGATCGGTGAGACGCAGGCGG--------------------- 721 consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 ACACGCGTTGGATCCACGGGCGGAGACGATCTAACCCCAACCCAAGCAAGCAAGCAAGCA 1214 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 GCCCTNTGTCCNGGCCNACTCNTGTGCTGTCGCCGCCCGCGCCCCCGCCACGCGNAG--- 1023 consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 AGCATACAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATCAAACCTTT 1274 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 ACATCACACAAACGATGAGACTAAGCTTTTCCATCTGTTTTTCGTTGTAATTTTATTCGT 1334 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 CCGTCTTAGGTTAAAAACACATTTAGTTGGGGTTGTTTTTTTTTTATTTAGTATATTTAG 1394 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ------------------------------------------------------------ consensus_8807#5 ------------------------------------------------------------ consensus_8807#3 ------------------------------------------------------------ consensus_8807#2 ------------------------------------------------------------ consensus_8807#4 ------------------------------------------------------------ consensus_8807#0 TATTTTCATAGTGCAAAAAGGGTGCGCTTTTAACGCTTGTCGGCGTACATTTGAGTGCCG 1454 consensus_8807#6 ------------------------------------------------------------ consensus_8807#1 ----------------------------------- consensus_8807#5 ----------------------------------- consensus_8807#3 ----------------------------------- consensus_8807#2 ----------------------------------- consensus_8807#4 ----------------------------------- consensus_8807#0 CGAGCGGGCTTTGCATTTTTTTTTACTTTCGCAAT 1489 consensus_8807#6 ----------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||