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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1027 fasta sequence
[GCCAGAATCGCGCACGAGGCGAGTACGCGAAGGAGGCGGGAGCCTTCAGCTCGATGGCGGCCGGGGCGGCGTAGGTGGCATAGGACGCGATCGGTTGCGCGATCGAGTGGGTCGAGTAAGCGAACGAGGCGGGCGCGGCAGCCGCGTACGTGGCAACCGGAAGCGGGAGGGCCGGAGCGGCAGCCGGGGCCGGTGCGGCGGCAATGATGGCGGTAGAATCGGCAGCGGCAGCGTCGGCGGCGGCAGCAGCAGCAGCAGCATCCTCCTTCTCGGCGGCGGCGTTACGCAGCTTGGCCTCCTCGATCGCGGCCATATGGTCGGCCTTGGCGGCGGCGACCTCGGGCGTGTCCTGGACCGGTTCGGGCGCGGTACGAGTTTCCACCGGTGCGACCGGCAGGTTGGAAGCGGCCACCCGGAATCCGTTCAGCGCGTCGGCGGTGTAGGCGACGGTCTGGAGCTTGTTCTCCGCATCCAGATAGCTGTAGGAACCGCGGGTGATGCCATCGAACGACTTGGACTCCGCCTTGGCCGACAGTCCTCCGTTGTATCCATACGAGTATTGGCCGAGCTCGTCCTGGGCGTGGTACTGGCTGTGCAGTTCGGCCGGCCCGGCCGCCGCAATGTACGTGGCGGGGGCCAGCGGCGCAGCGGCAGCGTACAGCGCCGGCTGATGGGCGTACGCTGCGTACAGCGTGGCCCGATTGGCGGCAGGCCANGTTGGCCAAACGGCCAGCCAGGGGAACCGACCACTTACGAAGCGAAACAAGTTTCCAGTATTTTGATAACCGGGGGGTATGGGTTGGTTATGTTGGCAGGAAACACCCACAAAGGTTCCGAAAAAANGCGGGCTTGCGCTGNGGGGAACTTGGGATTTTCCACTCTCCAGATTAACTNCGCGTTCCNATTCCTTCGTGGGCCGGAATTTCNGGGGAAACNAGGGGGCACACAATGTGGTTAGAAAGGTTGTTCCAACGGTTTACACAGCGTCTNGCACACCGATCTNGNGNGGTTGGGNCCAGAATTCCGT]
[+] EMBL BX467415 [GCCAGAATCGCGCACGAGGCGAGTACGCGAAGGAGGCGGGAGCCTTCAGCTCGATGGCGGCCGGGGCGGCGTAGGTGGCATAGGACGCGATCGGTTGCGCGATCGAGTGGGTCGAGTAAGCGAACGAGGCGGGCGCGGCAGCCGCGTACGTGGCAACCGGAAGCGGGAGGGCCGGAGCGGCAGCCGGGGCCGGTGCGGCGGCAATGATGGCGGTAGAATCGGCAGCGGCAGCGTCGGCGGCGGCAGCAGCAGCAGCAGCATCCTCCTTCTCGGCGGCGGCGTTACGCAGCTTGGCCTCCTCGATCGCGGCCATATGGTCGGCCTTGGCGGCGGCGACCTCGGGCGTGTCCTGGACCGGTTCGGGCGCGGTACGAGTTTCCACCGGTGCGACCGGCAGGTTGGAAGCGGCCACCCGGAATCCGTTCAGCGCGTCGGCGGTGTAGGCGACGGTCTGGAGCTTGTTCTCCGCATCCAGATAGCTGTAGGAACCGCGGGTGATGCCATCGAACGACTTGGACTCCGCCTTGGCCGACAGTCCTCCGTTGTATCCATACGAGTATTGGCCGAGCTCGTCCTGGGCGTGGTACTGGCTGTGCAGTTCGGCCGGCCCGGCCGCCGCAATGTACGTGGCGGGGGCCAGCGGCGCAGCGGCAGCGTACAGCGCCGGCTGATGGGCGTACGCTGCGTACAGCGTGGCCCGATTGGCGGCAGGCCANGTTGGCCAAACGGCCAGCCAGGGGAACCGACCACTTACGAAGCGAAACAAGTTTCCAGTATTTTGATAACCGGGGGGTATGGGTTGGTTATGTTGGCAGGAAACACCCACAAAGGTTCCGAAAAAANGCGGGCTTGCGCTGNGGGGAACTTGGGATTTTCCACTCTCCAGATTAACTNCGCGTTCCNATTCCTTCGTGGGCCGGAATTTCNGGGGAAACNAGGGGGCACACAATGTGGTTAGAAAGGTTGTTCCAACGGTTTACACAGCGTCTNGCACACCGATCTNGNGNGGTTGGGNCCAGAATTCCGT]
consensusID : consensus_8839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1014 fasta sequence
[ATCCCCCCGAGGTTACACTGGCCGCCTGAACCGACACTGGGACGACGAGCGGCTGTACCAGGAGACGCGGCGTATCGTCGGCGCAGTGATGCAGAAGATTTTCTACAACGAGTACCTGCCGTCGATCGTGGGCCATAGCAAGGCACGCCAGTACGGGCTGCTCGACAGCCACGGGGAGCAGACGGACTTTTACAGTCCCGACGTGAAGCCTGCCGTTTTTAACGAACTGTCCGGGGCAGCTTTCCGTTTCGGCCATTCTACCGTGGATGGAGCGTTTTTGATCCAGCATCGCCATCGCCGCACGGAGCTGGTACCGATTCAGGAAGTCTTCCTGAACCCGTCCCGTCTGCTGCAGCGCTCGTTTTTCGACGACTTTCTCTTCTCGCTGATGGATCAGCCGCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGATCATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTGCCCGGCTCGCCAGCGTGTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCCCCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCGCTCGCCTCGGTCATCTGCGCCTGGAGGGGTCACTAGCGGGGAGGGGTGAATTGTTTTATGTACTGCTTTGTAGTATGGCAGGGTGTATTTGTGTAGTTTCGTGTTTTAAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAAGATGTGCTGCAGCGCACAACGTTA]
[+] EMBL AL694885 [ATCCCCCCGAGGTTACACTGGCCGCCTGAACCGACACTGGGACGACGAGCGGCTGTACCAGGAGACGCGGCGTATCGTCGGCGCAGTGATGCAGAAGATTTTCTACAACGAGTACCTGCCGTCGATCGTGGGCCATAGCAAGGCACGCCAGTACGGGCTGCTCGACAGCCACGGGGAGCAGACGGACTTTTACAGTCCCGACGTGAAGCCTGCCGTTTTTAACGAACTGTCCGGGGCAGCTTTCCGTTTCGGCCATTCTACCGTGGATGGAGCGTTTTTGATCCAGCATCGCCATCGCCGCACGGAGCTGGTACCGATTCAGGAAGTCTTCCTGAACCCGTCCCGTCTGCTGCAGCGCTCGTTTTTCGACGACTTTCTCTTCTCGCTGATGGATCAGCCGCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTC ]
[+] EMBL BX629271 [ CTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGATCATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTGCCCGGCTCGCCAGCGTGTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCCCCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCGCTCGCCTCGGTCATCTGCGCCTGGAGGGGTCACTAGCGGGGAGGGGTGAATTGTTTTATGTACTGCTTTGTAGTATGGCAGGGTGTATTTGTGTAGTTTCGTGTTTTAAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAAGATGTGCTGCAGCGCACAACGTTA]
[+] EMBL BX629164 [ CGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGATCATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTGCCCGGCTCGCCAGCGTGTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCCCCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCGCTCGCCTCGGTCATCTGCGCCTGGAGGGGTCACTAGCGGGGAGGGGTGAATTGTTTTATGTACTGCTTTGTAGTATGGCAGGGTGTATTTGTGTAGTTTCGTGTTTTAAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAAGATGTGCTGCAGCGCACAACGTTA]
consensusID : consensus_8839#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 950 fasta sequence
[ATAGCAGTCGCTCGGAGCAGTTCATTCAAGTTGTTCAGTGATTGCCTTAAAGTAGCACATCCGCCACTCTCTCTCTCTCTCTCTCTCCGCCCGCCCGCTCGCCGTCGCTCATTCGCTCTCAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAGCAAGTGTGTGCGTGTGCACGAGGAATAAACGCACATCTTTTTCTCTCTGGTTCATATTGCTT-CCCGCAATGCTTGTTGGGTGCGTAATTAGGAGTGTAAAATATCCCAAATAACTCTCATCTCTTCTCCGAATGATATGGAGTATTTTTGCTTCCG-ATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCGGCAGCAGCAGCGACGAAGTGAAGGAGCACCGTCTCCGTTCGTTCGTGCTGCAGCTGGACCGGTGCCCCGCAAAGGGTGCTAACCGCGTAGTTG-TGCCCACCCCGAACGGGCATGGGCACTCTGCAGCAGCTGCTGCTGCTGTAAGTCCTCCGCAGTGATGATGGAGACTTAAAGCAGCAGCCCTACAACAGGGACAAAGGGAGGAGAGAGAGAGAGTTAGAGCGAGCGAGC----AAGAGAGGGAGAGAGAGAGGGGTGTATGTGTGTGTGCGCTCGAGGCGCGTGCGTGCACTCGGGCCAATGAGTCCGCCGCGTCCAACGAAACACATTTAACATCCAACAAAAAGGGCTAATTATTGAACGTTAACGACAGACGGGCGCGCGCGCCCGGTGTGTGATGTGTGCGTATATGCGCATCCGGTTTAACAGCAAACACAGCCGCAGCAACAATAACAGCAACAACAGCATCAGCAACCAGAGTATCAGGCCTTCTTTTCCGGCAAGGAAAACACTGTCTTCAGGCGTGTGCAGCGTTATACACTTTTGTCATCTTAGATCGAAATAATAATGTAAAGCAAACAGATTAAACGAAAAAACATTAAA]
[+] EMBL CNS09FMA [ATAGCAGTCGCTCGGAGCAGTTCATTCAAGTTGTTCAGTGATTGCCTTAAAGTAGCACATCCGCCACTCTCTCTCTCTCTCTCTCTCCGCCCGCCCGCTCGCCGTCGCTCATTCGCTCTCAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAGCAAGTGTGTGCGTGTGCACGAGGAATAAACGCACATCTTTTTCTCTCTGGTTCATATTGCTT CCCGCAATGCTTGTTGGGTGCGTAATTAGGAGTGTAAAATATCCCAAATAACTCTCATCTCTTCTCCGAATGATATGGAGTATTTTTGCTTCCGTATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCGGCAGCAGCAGCGACGAA TGAAGGAGCACCGTCTCCGTTCGTTCGTGCTACAGCTGGACCGGTGCCCCGCAAAGGGTGCTAACCGCGTAG TG GGCCCACCCCGAACGGGCATGGGCACTCTGCAGCAGCTGCT CTGCTGTAAGTCCTCCGCAGTGATGATGGAGACTTAAAGCAGCAGCCCTACAACAGGGACAAAGGGAGGAGAGAGAGAGAGTTAGAGCGAGCGAGC AAGAGAGGGAGAAAAAAAGGGGTGTATGTGTGTGTGCGCTCGAGGCGCGTGCGTGCACTCGGGCCAATGAGTCCGCCGCGTCCAACGAAACACATTTAACATCCAAAAAAAAGGGCTAATTATTGAACGTTAACGACAGACGGGCGCGCGCGCCCGTTGTGTGATGTG ]
[+] EMBL CNS09POC [ acCTCGGAGCAGTTCATTCAAGTTGTTCAGTGATTGCCTTAAAGTAGCACATCCGCCACTCTCTCTCTCTCTCTCTCTCCGCCCGCCCGCTCGCCGTCGCTCATTCGCTCTCAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAGCAAGTGTGTGCGTGTGCACGAGGAATAAACGCACATCTTTTTCTCTCTGGTTCATATTGCTT CCCGCAATGCTTGTTGGGTGCGTAATTAGGAGTGTAAAATATCCCAAATAACTCTCATCTCTTCTCCGAATGATATGGAGTATTTTTGCTTCCG ATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCGGCAGCAGCAGCGACGAAGTGAAGGAGCACCGTCTCCGTTCGTTCGTGCTGCAGCTGGACCGGTGCCCCGCAAAGGGTGCTAACCGCGTAGTTG CGCCCACCCCGAACGGGCATGGGCACTCTGCAGCAGCTGCTGCTGCTGTAAGTCCTCCGCAGTGATGATGGAGACTTAAAGCAGCAGCCCTACAACAGGGACAAAGGGAGGAGAGAGAGAGAGTTAGAGCGAGCGAGC AAGAGAGGGAGAGAGAGAGGGGTGTATGTGTGTGTGCGCTCGAGGCGCGTGCGTGCACTCGGGCCAATGAGTGCGCCGCGTCCAACGAAACACATTTAACATCCAACAAAAAGGGCTAATTATTGAACGTTAACGACAGACGGGCGCGCGCGCCGGGTGTGTGATGTGTGCGTATATGCGCATCCGGTTTAACAGCAAACACAGCCGCAGCAACAATAACAGCAACAACAGCATCAGCAACCAGAGTATCAGGCCTTCTTTTCCGGCAAGGAAAACACTGTCTTCAGGCGTGTG ]
[+] EMBL CNS09KOI [ AGTTCATTCAAGTTGTTCAGTGATTGCCTTAAAGTAGCACATCCGCCACTCTCTCTCTCTCTCTCTCTCCGCCCGCCCGCTCGCCGTCGCTCATTCGCTCTCAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAGCAAGTGTGTGCGTGTGCACGAGGAATAAACGCACATCTTTTTCTCTCTGGTTCATATTGCTT CCCGCAATGCTTGTTGGGTGCGTAATTAGGAGTGTAAAATATCCCAAATAACTCTCATCTCTTCTCCGAATGATATGGAGTATTTTTGCTTCCG ATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCGGCAGCAGCAGCGACGAAGTGAAGGAGCACCGTCTCCGTTCGTTCGTGCTGCAGCTGGACCGGTGCCCCGCAAAGGGTGCTAACCGCGTAGTTG TGCCCACCCCGAACGGGCATGGGCACTCTGCAGCAGCTGCTGCTGCTGTAAGTCCTCCGCAGTGATGATGGAGACTTAAAGCAGCAGCCCTACAACAGGGACAAAGGGAGGAGAGAGAGAGAGTTAGAGCGAGCGAGCGAGAAAGAGAGGGAGAGAGAGGTGGGTGTATGTGTGTGcacgatag ]
[+] EMBL CNS09GC6 [ CTCTCTCTCTCCGCCCGCCCGCTCGCCGTCGCTCATTCGCTCTCAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAGCAAGTGTGTGCGTGTGCACGAGGAATAAACGCACATCTTTTTCTCTCTGGTTCATATTGCTT CCCGCAATGCTTGTTGGGTGCGTAATTAGGAGTGT AAATATCCCAAATAACTCTCATCTCTTCTCCGAATGATATGGAGTATTTTTGCTTCCG ATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCGGCAGCAGCAGCGACGAAGTGAAGGAGCA CGTCT CGTTCGTTCGTGCTGCAGCTGGACCGGTG ]
[-] EMBL CNS09POD [ tTCTCTCCGCCCGCCCGCTCGCCGTCGCTTATTTGCTCTCAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAGCAAGTGTGTGCGTGTGCACGAGGAATAAACGCACATCTTTTTTTTTCTGGTTCATATTGCTTCCCCGCAATGCTTGTTGGGTGCGTAATTAGGAGTGTAAAATATCCCAAATAACTCTCATCTCTTCTCCGAATGATATGGAGTATTTTTGCTTCCG ATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCGGCAGCAGCAGCGACGAAGTGAAGGAGCACCGTCTCCGTTCGTTCGTGCTGCAGCTGGACCGGTGCCCCGCAAAGGGTGCTAA CGCGTAGCGGTTGGCCACCCCGAACGGGCATGGGCACTCTGCAGCAGCTGCTGCTGCTGTAAGTCCTCCGCAGTGATGATGGAGACTTAAAGCAGCAGCCCTACAACAGGGACAAAGGGAGGAGAGAGAGAGAGTTAGAGCGAGCGAGC AAGAGAGGGAGAGAGAGAGGGGTGTATGTGTGTGTGCGCTCAAGGCGCGTGCGTGAACTCGGGCCAATGAGTCCGCCGCGTCCAACGAAACACATTTAACATCCAACAAAAAGGGCTAATTATTGAACGTTAACAACAAACGGGCGCGCGCGCGCGGTGTGTGATGTGTGCGTATATGCGCATCCGGTTTAACAGCAAAAACAGCCGCAGCAACAATAACAGCAACAACAGCATCAGCAACCAGAGTTTCAGGCCTTCTTTTCCGGCAAGGAAAAAACTGTCTTCAGGAGTTTGCAGCGTTATACACTTTTGTCATCTTAGATCGAAATAATAATGTAAAGCAAACAGATTAAACGAAAAAACATTAAA]
consensusID : consensus_8839#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 733 fasta sequence
[GCCAAGAATCGGCACGATGGAGGATCTTTGTCTTCAGCAAATGGAAGTGTCAACAACGAATACGCTTATGTGAAACCAAATAGCCCATGCAAGTCGACAAGTGGGGTATTGGCGCACAATAATATTCCTCCTTCGTCGATACCAAAGCCAACGGCTCCAAATAGTGGAGGACTAGGCTCACCGGGAGCTACTCAAAAACCGTTAACAGCGACAGTAGGTTACGTAAATAATGCTAAACCGGGACAGAAAGCAAATAAGACTGTCTCGTGGAATCGTGACGTGCCTACCGAAAAGTTGAGCTTTACCATGCGTCGGGAGTTCGATAAGCAGAAGGAGGAAACTGAACTCATTGAGCAACTGCGGCAAATTATTGAAACCCGCTTGAAAATGTCGCTTCCGCAAGACATTGCACCTGCGTTAATGGATGGTGTCGTACTATGCCATCTTGCGAATCTTGTTCGACCAAGATCTGTTGGCAGCCATTCACGTCCCTTCTTCAGCCTGTGCCAAAATTGACCATGGCTTCCGATGTCGAAGAAACGGTGGATTCATTTTCCTGGAATGGCTTGTTCGAAAAAATAGGCGTAGGATTCAAGAATCTTCCTGTGGCTTGCAGACAAGCNCGNATGTCCTTGNAAGGGTCGAGGGCATGTACAGGTTNGCAATAACCANGTGGTGGAAGCATGGCTTGAAAGTTTTCCATAGACCCGGGGATACACAACGTTCGGTCAAC]
[+] EMBL BX469851 [GCCAAGAATCGGCACGATGGAGGATCTTTGTCTTCAGCAAATGGAAGTGTCAACAACGAATACGCTTATGTGAAACCAAATAGCCCATGCAAGTCGACAAGTGGGGTATTGGCGCACAATAATATTCCTCCTTCGTCGATACCAAAGCCAACGGCTCCAAATAGTGGAGGACTAGGCTCACCGGGAGCTACTCAAAAACCGTTAACAGCGACAGTAGGTTACGTAAATAATGCTAAACCGGGACAGAAAGCAAATAAGACTGTCTCGTGGAATCGTGACGTGCCTACCGAAAAGTTGAGCTTTACCATGCGTCGGGAGTTCGATAAGCAGAAGGAGGAAACTGAACTCATTGAGCAACTGCGGCAAATTATTGAAACCCGCTTGAAAATGTCGCTTCCGCAAGACATTGCACCTGCGTTAATGGATGGTGTCGTACTATGCCATCTTGCGAATCTTGTTCGACCAAGATCTGTTGGCAGCCATTCACGTCCCTTCTTCAGCCTGTGCCAAAATTGACCATGGCTTCCGATGTCGAAGAAACGGTGGATTCATTTTCCTGGAATGGCTTGTTCGAAAAAATAGGCGTAGGATTCAAGAATCTTCCTGTGGCTTGCAGACAAGCNCGNATGTCCTTGNAAGGGTCGAGGGCATGTACAGGTTNGCAATAACCANGTGGTGGAAGCATGGCTTGAAAGTTTTCCATAGACCCGGGGATACACAACGTTCGGTCAAC]
consensusID : consensus_8839#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[AGAATCCCCCGAGGTTATGCATTGTGCTCCGGCATTCCAAACTAGCTTTCGTTTCACTGTCCCGTTGTTTATAGTCAGCATCAGTAAAAGTTACAATGCCTGCTCCAGCGAGTTCCACTTCCGTCGGCAGCGGTAGCCGATCACCGTCGAAGCCGACGTCTGCCCCGCGGGCAGCGGCCGGAGGTTCCAGCACGTTGAAGCAGCGCAAAAACACCACGAACGCGACGCGCGCGGAATCGTAACACGGGTACCGGATCCGGTGGCATGTGGCGCTTCTACACCGATGACTCTCCCGGCATCAAGGTTGGNCCAGTCCCAGTGCTCGTCATGTCGCTGCTCTTCATCGCCTCCGTCTTCATGCTGCACATCTGGGGCAAATACACGCGTGCACTTAACAAGTCTGCGTACATCCAACCATCGCTAGGCTTAAACGTGGAGGCTTCCGGTCTCTTACATCGTAAATCGATCTACAACAGGCCAACAACACCGCAGGAGAAGGACACGTGTCCGTCCCCCCGTTACTCTATCCGTGTTTTATTCGCGTAAACC]
[+] EMBL AL929668 [AGAATCCCCCGAGGTTATGCATTGTGCTCCGGCATTCCAAACTAGCTTTCGTTTCACTGTCCCGTTGTTTATAGTCAGCATCAGTAAAAGTTACAATGCCTGCTCCAGCGAGTTCCACTTCCGTCGGCAGCGGTAGCCGATCACCGTCGAAGCCGACGTCTGCCCCGCGGGCAGCGGCCGGAGGTTCCAGCACGTTGAAGCAGCGCAAAAACACCACGAACGCGACGCGCGCGGAATCGTAACACGGGTACCGGATCCGGTGGCATGTGGCGCTTCTACACCGATGACTCTCCCGGCATCAAGGTTGGNCCAGTCCCAGTGCTCGTCATGTCGCTGCTCTTCATCGCCTCCGTCTTCATGCTGCACATCTGGGGCAAATACACGCGTGCACTTAACAAGTCTGCGTACATCCAACCATCGCTAGGCTTAAACGTGGAGGCTTCCGGTCTCTTACATCGTAAATCGATCTACAACAGGCCAACAACACCGCAGGAGAAGGACACGTGTCCGTCCCCCCGTTACTCTATCCGTGTTTTATTCGCGTAAACC]
consensusID : consensus_8839#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 295 fasta sequence
[TATGAATTCCAACGCCGTCGCACTGCTGCTGTTCGTGGCATTGGCCGTCTGCATCGGGGACAGTGCCGAAATTCCGCCCCTACCGGTACAGGACGAACAAACGGCCGGCGCATCGTCAGCGGAACCGGAAGAATCTTATCTAGGGGTAAAGCTGTACAAAATGGAGCAACCTCACCTGCCACGAGTACCGCGGCGCTTGTATGGAGCGATGCGCCGAAGAGCTACAGCGCCCGTCCACCGATTGTACCGATGGGAGCAAGTGCTGCGTGCTGGTCGTATAAGCCTTTTGTTGTTT]
[+] EMBL CNS090D5 [TATGAATTCCAACGCCGTCGCACTGCTGCTGTTCGTGGCATTGGCCGTCTGCATCGGGGACAGTGCCGAAATTCCGCCCCTACCGGTACAGGACGAACAAACGGCCGGCGCATCGTCAGCGGAACCGGAAGAATCTTATCTAGGGGTAAAGCTGTACAAAATGGAGCAACCTCACCTGCCACGAGTACCGCGGCGCTTGTATGGAGCGATGCGCCGAAGAGCTACAGCGCCCGTCCACCGATTGTACCGATGGGAGCAAGTGCTGCGTGCTGGTCGTATAAGCCTTTTGTTGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8839#4 ----AGAATCCCCCGAGGTTATGCATTGTGCTCCGGCATTCCAAACTAGCTTTCGTTTCA 56
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 GCCAGAATCGCGCACGAGGCGAGTACGCGAAGGAGGCGGGAGCCTTCAGCTCGATGGCGG 60
consensus_8839#1 -------ATCCCCCCGAGGT-TACACTGGCCGCCTGAACCGACACTGGGACGACGAGCGG 52
consensus_8839#2 -ATAGCAGTCGCTCGGAGCAGTTCATTCAAGTTGTTCAGTGA----TTGCCTTAAAGTAG 55
consensus_8839#3 -----------------GCCAAGAATCGGCACGATGGAGGATC--TTTGTCTTCAGCAAA 41
consensus_8839#4 CTGTCCCGTTGTTTATAGTCAG----CATCAGTAAAAGTTACAATGCCTGCTCCAGCGAG 112
consensus_8839#5 ------------------------------------------------------TATGAA 6
consensus_8839#0 CCGGGGCGGCGTAGGTGGCATA----GGACGCGATCGGTTGCGCGATCGAGTGGGTCGAG 116
consensus_8839#1 CTGTACCAGGAGACGCGGCGTATCGTCGGCGCAGTGATGCAGAAGATTTTCTACAACGAG 112
consensus_8839#2 CACATCCGCCACTCTCTCTCTCTCTCTCTCTCCGCCCGCCCGCTCGCCGTCGCTCATTCG 115
consensus_8839#3 TGGAAGTGTCAACAACGAATACGCTTATGTGAAACCAAATAGCCCATGCAAGTCGACAAG 101
consensus_8839#4 TTC--CACTTCCG--TCGGCAGCGGTAGCCGATCACCGTCGAAG--CCGACGTCTGCCCC 166
consensus_8839#5 TTC--CAACGCCG--TCGC-----ACTGCTGCTGTTCGTGGCAT--TGGCCGTCTGCATC 55
consensus_8839#0 TAAG-CGAACGAG--GCGGGCGCGGCAGCCGC-GTACGTGGCAA--CCGGAAGCGGGAGG 170
consensus_8839#1 TACC-TGCCGTCGA-TCGTGGGCCATAGCAAG-GCACGCCAGTA--CGGGCTGCTCGACA 167
consensus_8839#2 CTCT-CAACGAAACTTCCAGACGGACCATCTCCGACCCCAGCAAG-CAAGTGTGTGCGTG 173
consensus_8839#3 TGGGGTATTGGCGCACAATAATATTCCTCCTTCGTCGATACCAAAGCCAACGGCTCCAAA 161
consensus_8839#4 G---CGGGCAGCGGCCGGA-----G---GTTCCAGCACGTTGAAGCAG-----CGCAA-A 209
consensus_8839#5 G---GGGACAGTG-CCGAA-----A---TTCCGCCCCTACCGGTACAG-----GACGA-A 97
consensus_8839#0 GCC-GGAGCGGCAGCCGGG-----GCCGGTGCGGCGGCAATGATGGCG-----GTAGA-A 218
consensus_8839#1 GCCACGGGGAGCAGACGGACTTTTACAGTCCCGACGTGAAGCCTGCCGTTTTTAACGA-A 226
consensus_8839#2 TGCACGAGGAATAAACGCACA---TCTTTTTCTCTCTGGTTCATATTGCTTCCCGCAATG 230
consensus_8839#3 TAGTGGAGGACTAGGCTCACCG--GGAGCTACTCAAAAACCGTTAACAG---CGACAG-- 214
* * *
consensus_8839#4 AACACCACGAACGCGA-CGCGCGCGG-AA-----TCGTA--ACACGGGTACCGGATCCGG 260
consensus_8839#5 CAAACGGCCGGCGCAT-CGTCAGCGG-AA-----CCGGA--A-----GAATCTTATCTAG 143
consensus_8839#0 TCGGCAGCGGCAGCGT-CGGCGGCGGCAG-----CAGCA--GCAGCAGCATCCTCCTTCT 270
consensus_8839#1 CTGTCCGGGGCAGCTTTCCGTTTCGGCCA-----TTCTACCGTGGATGGAGCGTTTTTGA 281
consensus_8839#2 CTTGTTGGGTGCGTAATTAGGAGTGTAAAATATCCCAAATAACTCTCATCTCTTCTCCGA 290
consensus_8839#3 TAGGTTACGTAAATAATGCTAAACCGGGA-----CAGAAAGCAAATAAGACTGTCTCGTG 269
*
consensus_8839#4 -TGGCATGTGGCGCT-TCTACACCGATGA--CTCTCCCGGCAT-CAAGGTTGGNCCAGTC 315
consensus_8839#5 -GGGTAAA--GCTGT-ACAAAATGGAGCAACCTCACCTGCCAC-GAGTACCGCGGCGCTT 198
consensus_8839#0 -CGGCG----GCGGC-GTTACGCAGCTTGGCCTCCTCGATCGC-GGCCATATGGTCGGCC 323
consensus_8839#1 -TCCAGCATCGCCATCGCCGCACGGAGCTGGTACCGATTCAGG-AAGTCTTCCTGAACCC 339
consensus_8839#2 ATGATATGGAGTATTTTTGCTTCCGATGAAAGTTCCCAAACGTAGAGCAGACCATTCCCG 350
consensus_8839#3 GAATCGTGACGTGCCTACCGAAAAGTTGAGCTTTACCATGCGTCGGGAGTTCGATAAGCA 329
* *
consensus_8839#4 CCAGTGCTCGTCATGTCGCTGCTCTT-CATCGCCTCCGTCTTCATGCTGCACATCTGGG- 373
consensus_8839#5 GTATGGAGCGATGCGCCGAAGAGCTA-CAGCGCC--CGTCCACCGATTGTACCGATGGGA 255
consensus_8839#0 TTGGCGGCGGCGACCTCGGGCGTGTC-CTGGACC--GGTTCGGGCGCGGTACGAGTTTCC 380
consensus_8839#1 GTCCCGTCTGCTGCAGCGCTCGTTTTTCGACGACTTTCTCTTCTCGCTGATGGATCAGCC 399
consensus_8839#2 GCAGCAGCAGCGACGAAGTGAAGGAG-CACCGTCTCCGTTCGTTCGTGCTGCAGCTGG-- 407
consensus_8839#3 GAAGGAGG----AAACTGAACTCATT-GAGCAACTGCGGCAAATTATTGAA-ACCCGCTT 383
* *
consensus_8839#4 GCAAATAC-ACGCGTGCACTTAACA-AGTCTGCGTACATCCAACCATCGCTAGGCTTAAA 431
consensus_8839#5 GCAAGTGCTGCGTGCTGGTCGTATA-AGCCTTTTGTTGTTT------------------- 295
consensus_8839#0 ACCGGTGCGACCGGCAGGTTGGAAGCGGCCACCCGGAATCCGTTCAGCGCGTCGGCGGTG 440
consensus_8839#1 GCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCG 459
consensus_8839#2 ACCGGTGCCCCGCAAAGGGTGCTAACCGCGTAGTTGTGCCCACCCCGAACGGGCATGG-G 466
consensus_8839#3 GAAAATGTCGCTTCCGCAAGACATTGCACCTGCGTTAATGGATGGTGTCGTACTATGCCA 443
*
consensus_8839#4 CGTGG-AGGCTTCCGGTCTCTTACATCGTAAATCGATCTACAACAGGCCAACAACACCGC 490
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 TAGGC-GACGGTCTGGAGCTTGTTCTCCGCATCCAGATAGCTGTAGGAACCGCGGGTGAT 499
consensus_8839#1 CAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGATCATGCGCT 519
consensus_8839#2 CACTCTGCAGCAGCTGCTGCTGCTGTAAGTCCTCCGCAGTGATGATGGAGACTTAAAGCA 526
consensus_8839#3 TCTTGCGAATCTTGTTCGACCAAGATCTGTTGGCAGCCATTCACGTCCCTTCTTCAGCCT 503
consensus_8839#4 AGGAGAAGGACACGTGTCCGTCCCCCCGTTACTCTATCCGT-GTTTTATTCGCGTAAACC 549
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 GCCATCGAACGACTTGGACTCCGCCTTGGCCGACAGTCCTCCGTTGTATCCATACGAGTA 559
consensus_8839#1 GCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCA 579
consensus_8839#2 GCAGCCCTACAACAGGGACAAAGGGAGGAGAGAGAGAGAGTTAGAGCGAGCGAGCAAGAG 586
consensus_8839#3 GTGCCAAAATTGACCATGGCTTCCGATGTCGAAGAAACGGTGGATTCATTTTCCTGGAAT 563
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 --TTGGCCGAGCTCGTCCTGGGCGTGGTACTGGCTGTGCAGTTCGGCCGGCCCGGCCGCC 617
consensus_8839#1 GTTCGGTCCGGTCGGTGCCCGGCTCGCCAGCGTGTACGAGTTCC---CGGACGATGTGGA 636
consensus_8839#2 -------AGGGAGAGAGAGAGGGGTGTATGTGTGTGTGCGCTCG---AGGCGCGTGCGTG 636
consensus_8839#3 GGCTTGTTCGA--AAAAATAGGCGTAGGATTCAAGAATCTTCCTGTGGCTTGCAGACAAG 621
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 GCAATGTACGTGGCGGGGGCCAGCGGCGCAGCGGCAGCGTACAGCGCCGGCTGATGGG-C 676
consensus_8839#1 CCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAAC 696
consensus_8839#2 CACTCGGGCCAATGAGTCCGCCGCGTCCAACGAAACACATTTAACATCCAACAAAAAGGG 696
consensus_8839#3 CNCGNATGTCCTTGNAAGGGTCGAGGGCATGTACAGGTTNGCAATAACCANGTGGTGGAA 681
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 GTACGCTGCGTACAGCGTGGCCCGATTGGCGGC-AGGCCANGTTGGCCAAACGGCCAGCC 735
consensus_8839#1 GTTCGCCGCCATCATTAGCGAACAGTTCGCGCG-GCTCAAGTTTGGCGACCGGTACTACT 755
consensus_8839#2 CTAATTATTGAACGTTAACGACAGACGGGCGCGCGCGCCCGGTGTGTGATGTGTGCGTAT 756
consensus_8839#3 GCATGGCTTGAAAGTTTTCCATAGACCCGGGGATACACAACGTTCGGTCAAC-------- 733
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 AGGGGAACCGACCACTTACGAAGCGAAACAAGTTTCCAGTATTTTGATAACCGGGGGGTA 795
consensus_8839#1 ACACGAACGGGCCCCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGC--GCGAACT 813
consensus_8839#2 ATGCGCATCCGGTTTAACAGCAAACACAGCCGCAGCAACAATAACAGCAACAACAGCATC 816
consensus_8839#3 ------------------------------------------------------------
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 TGGGTTGGTTATGTTGGCAGGAAACACCCACAAAGGTTCCGAAAAAANGCGGGCTTGCGC 855
consensus_8839#1 GAGCAAGGTGTCGCTCGCCTCGGTCATCTGCGCCTGGAGGGGTCACTAGCGGGGAGGGGT 873
consensus_8839#2 AGCAACCAGAGTATCAGGCCTTCTTTTCCGGCAAGGAAAACACTGTCTTCAGGCGTGTGC 876
consensus_8839#3 ------------------------------------------------------------
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 TGNGGGGAACTTGGGATTTTCCACTCTCCAGATTAACTNCGCGTTCCNATTCCTTCGTGG 915
consensus_8839#1 GAATTGTTTTATGTACTGCTTTGTAGTATGGCAGGGTGTATTTGTGTAGTTTCGTGTTTT 933
consensus_8839#2 AGCGTTATACACTTTTGTCATCTTAGATCGAAATAATAATGTAAAGCAAACAGATTAAAC 936
consensus_8839#3 ------------------------------------------------------------
consensus_8839#4 ------------------------------------------------------------
consensus_8839#5 ------------------------------------------------------------
consensus_8839#0 GCCGGAATTTCNGGGGAAACNAGGGGGCACACAATGTGGTTAGAAAGGTTGTTCCAACGG 975
consensus_8839#1 AAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAAGAT 993
consensus_8839#2 GAAAAAACATTAAA---------------------------------------------- 950
consensus_8839#3 ------------------------------------------------------------
consensus_8839#4 ----------------------------------------------------
consensus_8839#5 ----------------------------------------------------
consensus_8839#0 TTTACACAGCGTCTNGCACACCGATCTNGNGNGGTTGGGNCCAGAATTCCGT 1027
consensus_8839#1 GTGCTGCAGCGCACAACGTTA------------------------------- 1014
consensus_8839#2 ----------------------------------------------------
consensus_8839#3 ----------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||