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Anopheles gambiae
cluster # 8853 cluster # 8853       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8853#0 length = 1054 sequences # 9  
consensus_8853#1 length = 930 sequences # 3  

consensusID : consensus_8853#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1054
fasta sequence
                              [TATTGGCTAAGTCGTAAAATCGACCGCAAGCCAACAAAGAGCAGAAGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGCGAAGCAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA-GTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC----ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA-----ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGC-ACTTTTGTGCTACTGCATGAAAAAAAAAAAAAAAAAAAAAAGGGCCCATG]

[+] EMBL CNS09IVE             [TATTGGCTAAGTCGTAAAATCGACCGCAAGCCAACAAAGAGCAGAAGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGCGA  CAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GCGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGC ACTTTTGTGCTACTGCATGAAAAAAAAAAAAAAAAAAAAAAGGGCCCATG]
[+] EMBL CNS08Q42             [       aAAGTCGT AAAT GA CGCAA CCAACAAAGAGCAGAAGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGCGAA CAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGCGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGC ACTTTTGTGCTACTGCATGAA                             ]
[+] EMBL CNS08WE4             [        AAGTCGTAAAATCGACCGCAAGCCAACAAAGAGCAGAAGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGTGAAGCAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATA                                                            ]
[+] EMBL BM593084             [               ccgATCAACCGCAAGCCAACAAAGAGCAGAAGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGCGAAGCAAAGGTCCTCCTCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAAGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTAGGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTACATATATATATATATCATAGCTATATTGTT                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08Q43             [                                    AAGAGCAGAAGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTTACTTTCGTCCCTGCACAAGTACAACCTGCGAAGCAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGCGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACAAACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGC ACTTTTGT TTATTGC                                  ]
[+] EMBL BX628628             [                                             AGACTACAATTTGTATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTTCACAAGTACAACCTGCGAAGCAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGTTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTG                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09IVF             [                                                           ATCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTTACTTTCGTCCCTGCACAAGTACAACCTGCGAAGCAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GCGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCCCCCCCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGC ACTTTTGTGCTACTGGATGAAAA                           ]
[-] EMBL CNS08WE5             [                                                                                                                       CGACTCATTTGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGTGAAGCAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTA GTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTAC    ATATATATATCATAGCTATATTGTTTCAGTTCATATATATACAAACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGCGTTTTTTTTGCTACTG                                   ]
[+] EMBL BM598845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccGGTTCAG  G AATGGAGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTACATATATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCCAGCAGTGTTTAAACATTCATACAATTTAAGGAGCTAATTGCATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTATTGCGCTCGAATCTTCAAGCCCATCTCGAGTACTGATGTTAGTGAGAAGGAGAGAGTAAC ACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTAAGCTAAGCAAATGAAGGTACAATACTCGTCATCAGCGCGAATGTTGCAATAAAATATTGGTTATAATACAAAT                                                       ]


>consensus_8853#0 TATTGGCTAAGTCGTAAAATCGACCGCAAGCCAACAAAGAGCAGAAGACTACAATTTGTA TCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGC GACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCAC TTTCGTCCCTGCACAAGTACAACCTGCGAAGCAAAGGTCCTCCGCGGTATGTACAATTTT CGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTG GCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTT GCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGC GACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATA CCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATA AAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACC CGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATAT ATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTT CCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTAATTGTAAATT AGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACT GATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGA TTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATC AGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGCACTTTTGTGCTACTGC ATGAAAAAAAAAAAAAAAAAAAAAAGGGCCCATG



consensusID : consensus_8853#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 930
fasta sequence
                              [ATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGCGAACAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA-----ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATTTTACAATAAAAAAAAAAAAAAAAA]

[+] EMBL CNS08DVP             [ATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTTCGTCCCTGCACAAGTACAACCTGCGAACAAAGGTCCTCCGCGGTATGTACAATTTTCGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCGCGAATTTTACAATAAAAAAAAAAAAAAAAA]
[-] EMBL CNS08DVQ             [                                                                                                                                                                          AATTTTAGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTAATCTAAGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAAATGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATATATATACAAACTAAATCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTA     ATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATGTTAGTGAGAGGGAGAGAGTAACAACCCCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCA                                    ]
[+] EMBL BM597223             [                                                                                                                                                                                                                  ccGTGCACCGGTGATCGTAAACTGTGGCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCCGATCTGCAAAGAACAACTAGTGAAGAGTTTGTTCATCTACGATACGGAATACACGCGACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATATATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCGGTGTGATTCCAGCGGTGTTAAAACATTCATACAATTTAAGGAGCTAATTGCATTGTAAATTAGTGTAAGTGTTCAGGAATGGAGCTAATGCGCTCGAATCTTCAAGCCCATCTCGAGTACTGATGTTAGTGAGAGGGAGAGAGTAAC ACACCAGATGATATACTTTGAATTACGAACAGATTTCATTGCTTCGTAAGTTCGTGGTTA                                                                   ]


>consensus_8853#1 ATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGCGAC TCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCACTTT CGTCCCTGCACAAGTACAACCTGCGAACAAAGGTCCTCCGCGGTATGTACAATTTTCGGA CTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTGGCCA TTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTTGCCC GATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGCGACA TATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATACCAA GCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATAAAGC AGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACCCGCG GCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATATATAT ACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTTCCCG GTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTAATTGTAAATTAGTG TAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACTGATG TTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGATTTC ATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATCAGCG CGAATTTTACAATAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8853#0      TATTGGCTAAGTCGTAAAATCGACCGCAAGCCAACAAAGAGCAGAAGACTACAATTTGTA 60
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TCAATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGC 120
consensus_8853#1      ---ATCTTGTTAACAACAGCAGTTTACGTGTTCAGATAATCGAGATGAAGCCCAACAAGC 57
                         *********************************************************

consensus_8853#0      GACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCAC 180
consensus_8853#1      GACTCAATAGAAGCAAATCGATCGATTCGACTGTTTCCACGGGTTCTTCATTGGGCTCAC 117
                      ************************************************************

consensus_8853#0      TTTCGTCCCTGCACAAGTACAACCTGCGAAGCAAAGGTCCTCCGCGGTATGTACAATTTT 240
consensus_8853#1      TTTCGTCCCTGCACAAGTACAACCTGCGAA-CAAAGGTCCTCCGCGGTATGTACAATTTT 176
                      ****************************** *****************************

consensus_8853#0      CGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTG 300
consensus_8853#1      CGGACTCCGAATGTCCAATCTGCCTGGAAGATTACAGTGCACCGGTGATCGTAAACTGTG 236
                      ************************************************************

consensus_8853#0      GCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTT 360
consensus_8853#1      GCCATTCGTTCTGCAGTGTCTGCATCCAAGAGTGCATCAAGATGGCTGGTCTCGCCCTTT 296
                      ************************************************************

consensus_8853#0      GCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGC 420
consensus_8853#1      GCCCGATCTGCAAAGAACAACTAGTGAAGAGCTTGTTCATCTACGATACGGAATACACGC 356
                      ************************************************************

consensus_8853#0      GACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATA 480
consensus_8853#1      GACATATTGCCTCGAGGAAAGCGGTACAATACAGCAGCAGTATAACTGTGGCGTCGAATA 416
                      ************************************************************

consensus_8853#0      CCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATA 540
consensus_8853#1      CCAAGCCCACTGGCTCTTCCAGCCTCCAGAAGGTAGCCAGGCGTACGGTTGTGTAAGATA 476
                      ************************************************************

consensus_8853#0      AAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACC 600
consensus_8853#1      AAGCAGGGTGTAGTGCAAAAGGGTTCTGTTGAAATGTTGCTTCCCTCTTGCTAAACCACC 536
                      ************************************************************

consensus_8853#0      CGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATAT 660
consensus_8853#1      CGCGGCATTGTTGTTCTGATGTACATATATATATCATAGCTATATTGTTTCAGTTCATAT 596
                      ************************************************************

consensus_8853#0      ATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTT 720
consensus_8853#1      ATATACACACTCACTCAAATGATTTGATTGTTTGTCATGGTCGTGTGATAGCATTTATTT 656
                      ************************************************************

consensus_8853#0      CCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTAATTGTAAATT 780
consensus_8853#1      CCCGGTGTGATTCTAGCGGTGTTTAAACATTCATACAATTTAAGGAGCTAATTGTAAATT 716
                      ************************************************************

consensus_8853#0      AGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACT 840
consensus_8853#1      AGTGTAAGTGTTCAGGAATGGAGCTAGTGCGGTCGAATCTACAAGCCCATCTCGATTACT 776
                      ************************************************************

consensus_8853#0      GATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGA 900
consensus_8853#1      GATGTTAGTGAGAGGGAGAGAGTAACAACACCAGATGATATACTTTGAATTACGAACAGA 836
                      ************************************************************

consensus_8853#0      TTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATC 960
consensus_8853#1      TTTCATTGCTTCGTAAGTTCGTCGTTATGCTAAGCAAATAAAGGTACAATACTCGTCATC 896
                      ************************************************************

consensus_8853#0      AGCGCGAATGTTACAATAAAATATTGGTTATAATACAAATGGGCACTTTTGTGCTACTGC 1020
consensus_8853#1      AGCGCGAATTTTACAATAAAAAAAAAAAAAAAAA-------------------------- 930
                      ********* *********** *      * **                           

consensus_8853#0      ATGAAAAAAAAAAAAAAAAAAAAAAGGGCCCATG 1054
consensus_8853#1      ----------------------------------
                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)