These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1111 fasta sequence [AAATTCTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA-AGGATCCA-ATAGCCCCAC-TTGCTATGCTAGCTG-TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC-A-AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACT] [+] EMBL CNS097TC [AAATTCTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTTTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTTTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTTTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATTTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTTTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTAAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTG ] [+] EMBL CNS09NPL [ ttTTTTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGGCGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCCCAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCCCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAACCCTATGTTGCAGTTTGAATGCGGTTCCCCAATGTATATGAG ] [-] EMBL BM613492 [ CTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAcgg ] [-] EMBL CNS097TB [ CCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC ATAGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACT] [+] EMBL CNS09PO9 [ GATGATTAACACTACAGGATCCACATAGCCCCACTTTGCTATGCTAGCTGTTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTTATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTT ] [-] EMBL CNS09NPK [ CTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAA AGC GCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAata ] [-] EMBL BX628737 [ AGGCAAATATGACCCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAACTAATTTTCGTAACTG ] consensusID : consensus_8855#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 945 fasta sequence [ATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAGAGCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTCCAG] [-] EMBL CNS09PO8 [ATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAGAGCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTCCAG] consensusID : consensus_8855#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence [GCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGGCAATGTTAGTGCTGAACATAACCTTTTGAATTAGTTTTTTTAAATTCGACCGG] [-] EMBL BM634126 [GCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGGCAATGTTAGTGCTGAACATAACCTTTTGAATTAGTTTTTTTAAATTCGACCGG] consensusID : consensus_8855#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence [AAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATCTAAAATTTTGAAAGAGTTATATATTATAAGCCGGTCTCGTGGTACAGTCGTCAACTCCTATGTGCATGCAATATATCTCATTTTGTACACGATTTGAAACATTGCGACACATGTGTTGTGTCAAATACCGTACGAAATGAGATATATTGCACACATATACGCCATCGTGTGAACATAACTTTAGATGCTTAAGTATTGATTAAACATAATTTGTCTATGGTGGAAGAATTACACAAAATAAAATGTCTGTAAAATGTAAGACGATCGAATTGCCTTGTTAACCGT] [-] EMBL BX614930 [AAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATCTAAAATTTTGAAAGAGTTATATATTATAAGCCGGTCTCGTGGTACAGTCGTCAACTCCTATGTGCATGCAATATATCTCATTTTGTACACGATTTGAAACATTGCGACACATGTGTTGTGTCAAATACCGTACGAAATGAGATATATTGCACACATATACGCCATCGTGTGAACATAACTTTAGATGCTTAAGTATTGATTAAACATAATTTGTCTATGGTGGAAGAATTACACAAAATAAAATGTCTGTAAAATGTAAGACGATCGAATTGCCTTGTTAACCGT] consensusID : consensus_8855#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence [ATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCATAGACGATGATCATTCGTTTCGGCTATTTTATTTCACATTCCATGTCTACTCCGGAAACACCATCTAACAAGCACACTAACACATAGACATTCATTGATATGTAGGAAGCGGTATAATCGATCTTATAAAACATAACTTTTAAAACAAATTTAAAACATAAAACATATCTTTCAAATATTGTCATAGCAAAGCATTGTTGGGTTACATACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTGTACGG] [-] EMBL BM623390 [ATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCATAGACGATGATCATTCGTTTCGGCTATTTTATTTCACATTCCATGTCTACTCCGGAAACACCATCTAACAAGCACACTAACACATAGACATTCATTGATATGTAGGAAGCGGTATAATCGATCTTATAAAACATAACTTTTAAAACAAATTTAAAACATAAAACATATCTTTCAAATATTGTCATAGCAAAGCATTGTTGGGTTACATACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTGTACGG] consensusID : consensus_8855#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 542 fasta sequence [GNGCAGTCGAACCGAGAGATACTCCATTCGTTTGTCTTAGTACATGGTTGAACTGATTTTCATGTAACGCTNTTTCNGACATGACAACATACATNATTTGCACGGAGAGTCAAGACATGTCATTCTTACACATTGGCAAACGTTACAAATCCTATGTTGCAGTCTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCAGTTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCNTAGACGATGATCATTCGTTTCTGACNCTCGTGNGGGATTC] [-] EMBL BX466096 [GNGCAGTCGAACCGAGAGATACTCCATTCGTTTGTCTTAGTACATGGTTGAACTGATTTTCATGTAACGCTNTTTCNGACATGACAACATACATNATTTGCACGGAGAGTCAAGACATGTCATTCTTACACATTGGCAAACGTTACAAATCCTATGTTGCAGTCTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCAGTTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCNTAGACGATGATCATTCGTTTCTGACNCTCGTGNGGGATTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8855#1 ------------------------------------------------------------ consensus_8855#2 ------------------------------------------------------------ consensus_8855#0 AAATTCTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTT 60 consensus_8855#3 ------------------------------------------------------------ consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 ----------------------------------------------------------AT 2 consensus_8855#2 ------------------------------------------------------------ consensus_8855#0 AATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAAT 120 consensus_8855#3 ------------------------------------------------------------ consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 GGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCT 62 consensus_8855#2 ------------------------------------------------------------ consensus_8855#0 GGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCT 180 consensus_8855#3 ------------------------------------------------------------ consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 ACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACAC 122 consensus_8855#2 ------------------------------------------------------------ consensus_8855#0 ACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACAC 240 consensus_8855#3 ------------------------------------------------------------ consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 ------------------GNGCAGTCGAACCGAGAGATACTCCATTCGTTTGTCTTAGTA 42 consensus_8855#1 CAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCT 182 consensus_8855#2 ------------------------------------------------------------ consensus_8855#0 CAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCT 300 consensus_8855#3 ------------------------------------------------------------ consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 CATGGTTGAACTGATTTTCATGTAACGCTNTTTCNGACATGACAACATACATNATTTGCA 102 consensus_8855#1 AGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGC 242 consensus_8855#2 ----------------------------------------------------------GC 2 consensus_8855#0 AGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGC 360 consensus_8855#3 ------------------------------------------------------------ consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 CGGAGAGTCAAGACATGTCATTCTTACACATTGGCAAACGTTACAAATCCTATGTTGCAG 162 consensus_8855#1 GGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAG--AATCTCCTATTTTAA 300 consensus_8855#2 GGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAG--AATCTCCTATTTTAA 60 consensus_8855#0 GGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAG--AATCTCCTATTTTAA 418 consensus_8855#3 --------------------------AAAATTATTTACTGGTTTTAAATTCTTCATTCAT 34 consensus_8855#4 ------------------------------------------------------------ consensus_8855#5 TCTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAA 222 consensus_8855#1 CCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAGAGCGCATACGCTGGAGGGCATTTAT 360 consensus_8855#2 CCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCCGCATACGCTGGAGGGCATTTAT 120 consensus_8855#0 CCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCAGCATACGCTGGAGGGCATTTAT 478 consensus_8855#3 T--TAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCC 92 consensus_8855#4 -----------------------------ATATTGTTGTTTGTTTATAATATTCA-TTCA 30 consensus_8855#5 AACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCAGTTCA 282 * ** consensus_8855#1 ATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTG 420 consensus_8855#2 ATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTG 180 consensus_8855#0 ATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTG 538 consensus_8855#3 AAATGGACGAAGTAATCTT---TCACTATGCACAACATGTACAACACCGGGAGAGT-CTA 148 consensus_8855#4 AAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCA 90 consensus_8855#5 AAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCA 342 * * * * ** ** * consensus_8855#1 TTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAG 480 consensus_8855#2 TTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAG 240 consensus_8855#0 TTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAG 598 consensus_8855#3 CCATATCTACACTAGTTTCC-TTGTCAATCCATTTACGTT-------GCTGATGTCTTCG 200 consensus_8855#4 CCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACC 150 consensus_8855#5 CCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACC 402 * * * * * * * ** ** * consensus_8855#1 CACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAA-ATCTATTCGCCTCCTTCCG 539 consensus_8855#2 CACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAA-ATCTATTCGCCTCCTTCCG 299 consensus_8855#0 CACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAA-ATCTATTCGCCTCCTTCCG 657 consensus_8855#3 AACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACT--- 257 consensus_8855#4 TACAAATT--CAACATCAATCCAAGCCACTTTTTCCCTGC---ACAATCATTCCTTC--- 202 consensus_8855#5 TACAAATT--CAACATCAATCCAAGCCACTTTTTCCCTGC---ACAATCATTCCTTC--- 454 *** *** * * * * * * * consensus_8855#1 GAATGTCGAGCTAGGAACTTGTAGAATC-CGATTACACGTGTTGCAGGATAGGCAGCGAA 598 consensus_8855#2 GAATGTCGAGCTAGGAACTTGTAGAATC-CGATTACACGTGTAGCAGGATAGGCAGCGAA 358 consensus_8855#0 GAATGTCGAGCTAGGAACTTGTAGAATC-CGATTACACGTGTTGCAGGATAGGCAGCGAA 716 consensus_8855#3 ---TGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATG-AACCAT 313 consensus_8855#4 GAATGCAATTCTAGTAAA----AGAAGGAGTTGCAGCAAATAGGGCACATCATAGACGAT 258 consensus_8855#5 GAATGCAATTCTAGTAAA----AGAAGGAGTTGCAGCAAATAGGGCACATCNTAGACGAT 510 ** **** ** * * ** * * consensus_8855#1 CGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCA 658 consensus_8855#2 CGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCA 418 consensus_8855#0 CGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCA 776 consensus_8855#3 CAAGATCTTTATATTCGCA-ACGCGGTCCCATATAACCATCAGCACATCTAAAATTTTGA 372 consensus_8855#4 ---GATCATTCGTTTCGGCTATTTTATTTCACATT-CCATGTCTACTCCGGAAACACCAT 314 consensus_8855#5 ---GATCATTCGTTTCTGACNCTC-GTGNGGGATT-C----------------------- 542 * *** * consensus_8855#1 ACATACAACATAC-ATAA------TTTGCAGGAGAGTCAAGACATGTCATTTTAACATTG 711 consensus_8855#2 ACATACAACATAC-ATAA------TTTGCAGGAGAGTCAAGACATGTCATTTTAACATTG 471 consensus_8855#0 ACATACAACATAC-ATAA------TTTGCAGGAGAGTCAAGACATGTCATTTTAACATTG 829 consensus_8855#3 AAGAGTTATATATTATAAGCCGGTCTCGTGGTACAGTC--GTCAACTCCTATGTGCATGC 430 consensus_8855#4 CTAACAAGCACACTAACACATAGACATTCATTGATATGTAGGAAGCGGTATAATCGATCT 374 consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 AAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACA-ATGTATA---TGAGTTC 767 consensus_8855#2 AAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACA-ATGTATA---TGAGTTC 527 consensus_8855#0 AAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACA-ATGTATA---TGAGTTC 885 consensus_8855#3 AATATATCTCATTTTGTAC-ACGATTTGAA-ACATTGCGACACATGTGT----TGTGTCA 484 consensus_8855#4 TATAAAACATAACTTTTAAAACAAATTTAAAACA-TAAAACATATCTTTCAAATATTGTC 433 consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 AAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATAT 827 consensus_8855#2 AAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATAT 587 consensus_8855#0 AAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATAT 945 consensus_8855#3 AATACCGTACGAAATGAGATATATTGCACACATATACGCCATCGTGTG-----AACATAA 539 consensus_8855#4 ATAGCAAAGCATTGTTGGGTTACATACTCTCAACAAATGTATCATCTGCATAAAGGCGTT 493 consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 TGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGC-GCAATGTTAGTGCTG 886 consensus_8855#2 TGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTG--GCAATGTTAGTGCTG 645 consensus_8855#0 TGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGC-GCAATGTTAGTGCTG 1004 consensus_8855#3 CTTTAGATGCTTA-AGTATTGATT-AAACATAATTTGTCTATGGTGGAAGAATTACACAA 597 consensus_8855#4 CTACAAATAATTTTCGTAACTGT--ATACACAAATTCTCACTACACCACATACAATAGAA 551 consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 AACATAACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTCCAG- 945 consensus_8855#2 AACATAACCTTTTGAA-----------TTAGTTTTTTTAAATTCGACCGG---------- 684 consensus_8855#0 AACATAACTCTCAACAAATGTATC--ATCTGCATAAAGGCGTTCTACAAATAATTTTCGT 1062 consensus_8855#3 AATAAAATGTCTGTAAAATGTAAGACGATCGAATTGCCTTGTT-AACCGT---------- 646 consensus_8855#4 AAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTGTACGG-------------- 597 consensus_8855#5 ------------------------------------------------------------ consensus_8855#1 ------------------------------------------------- consensus_8855#2 ------------------------------------------------- consensus_8855#0 AACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACT 1111 consensus_8855#3 ------------------------------------------------- consensus_8855#4 ------------------------------------------------- consensus_8855#5 ------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||