These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8858#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1886 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCAGAACGACGCGATCCGAGCATAGGACAGCCGACCACCATCATCACCATCACCAGAAGAAGAATGCAGACAAACGACTGAGACGCACAGTGAGCAAAAAATGGCAAACAAAATTTTGCGAACCGGTTCGGTTCTGTTTTTTTTTGCTTCAAACGAAACGCAGACCCAAAACGACGACGTTATGAATCTTCCAAAACGGATAGAGACGAGCTTTTCAAACATTCCAGTCGAGGAGCTGTG-TCAGCATCGCGTGCAATGTGGGATGTTTCGGGGCAGCAACGGACAGACACCAGCGCTAGACATTGACCGTACAAACACGATCGTGCACCTCCGCACAGATAATCGGAACCACAACAAGGAACAACGCCGCCCCGGGCGGTTGCTTTCTTTATACGATCGATGCAGAAGCCTCACCCTGCAAGCAGCGCAAGCTAACTGCGATCAACTGGTACTGGTTGTGTTGATCGAGAGTTCTAGCCGTACGCCTGCCTTGGGAAAGGGTGGGTTCGGAGTGCTCTGCCGATCGTTGAAGAACGTGTGATAGAACCGCCGGGTGTGTGACACAGACAGAGCTTCGGGACGTTT-CCCGCTAGAGAGCGCTCGCGCGCTTTTTAATACTATTTATAACCCATTACGTCATTCATGCGCGGGTGCACATTTCATTCGTTTCGTGATTAGTTTTGTTGCTCTCGCCATGAGTGCAGGAGAAGCGACGAGAAGCAAAAGAATACGAATAAGAGAGGGTGAAAGAGAGAGAGAGAGAAAGAGAGAGTGCTGCAGCGGCTGCAGCGTTAACAGTAGCCTCGGTCGAGATGGATTTAATTTAATTTTATCATTATTTTATTGGTATATGTGTTAAGCGCGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAATGTATTTATGTGTGTGTGGTGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAATGGCAAGGGTTTGAGCAATTCTATCTAGATAGGCAGAGGCCACGTGCTGACGTGGGGGCAGAGTAGATGGCCATAGTAACAACAAAATCAAACACACAAAAATATGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAACATATCGGGCGCATACAAAGCATACACCAGACAAATTTAAACGATTTTGGGTACGAAGCGG-AAGCACACGGAGAGTGCAGATGCGCTACTCGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAG-TTTTTTAAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTATGCTTATTTGTTTGTTTTTTTTTTTTACTATACACTTTACCTTTTTTCTTTCGTATTTCTCGCAAGGCAAATGGGAAG-TAATTAGTGCAACCCGGTTTTTAGGCCCCCAAAACACAGAAATGTTTTAGGCTGTAATGAGAAGAAAG-GAACG-------GGG-TGAACAGACAAGATAGGCAACACAAATGTTGTAAGACATATTCTCGCAAATCGTAGATGGAAAAGACAAAAAAACGCCATTACAGGGGCGTACACTAGTGGTAAGCTACTGTGAGCTAGTATAGCGACGAAAGGAAGGAATCAAATAATTGTGATGTATTAATGGTTAGGGATCTTGTGCC-AGGGGATGGAAGCGTAGCACCTGTCAGGTGGAACACATCCCCCTCCGGAAACAAGATGCGCAAGGAGTGAAGCATTATGTAAAGCAAACCCAGGCAAACATGCTTCAGATGGTACGTCTGTTTGAAGATAAGTGTGATTAATTTTGTTGACGAATGTCGAACTCCAAAGGTAGCATTGAGGTGCGGTGTGTTTTGAGATGTATTTC-AAAATGC-AAGTGAAATAAAATAATT] [+] EMBL BM621541 [CCGCCCACGCGTCCGCCCACGCGTCCGCAGAACGACGCGATCCGAGCATAGGACAGCCGACCACCATCATCACCATCACCAGAAGAAGAATGCAGACAAACGACTGAGACGCACAGTGAGCAAAAAATGGCAAACAAAATTTTGCGAACCGGTTCGGTTCTGTTTTTTTTTGCTTCAAACGAAACGCAGACCCAAAACGACGACGTTATGAATCTTCCAAAACGGATAGAGACGAGCTTTTCAAACATTCCAGTCGAGGAGCTGTGCTCAGCATCGCGTGCGATGTGGGATGTTTCGGGGCAGCAACGGACAGAAACCAGCGCTAGACATTGACCGTACAAACACGATCGTGCACCTCTGCACAGCTAATCGGAACCACAACGATGAACAACGCCGCCCCGCGCGGTTGCTTTCTTTTTACGATCGATGCAGAAGCCTCACCCTGCAAGCAGCGCAAGCTAACTGCGATCAACTGGTACTGGTTGTGTTGATCGAGAGTTCTAGCCGTACGCCTGCC TGGGAAAGGGTGCGTTCGGAGTGCTCTGCCGATCGTTGAAGATCGTGTGATAGAACCGCCGGGTGTGTG ACAGACAGAGCTTCGGGACGTTTCCCCGCTAGAGAGCGCTCGCGCGCTTTTTAATACTATTTATAACCCA ] [+] EMBL BX622605 [ AAAACGACGACGTTATGAATCTTCCAAAACGGATAGAGACGAGCTTTTCAAACATTCCAGTCGAAGAGCTGTGCTCAGCATCGCGTGCAATGTGGGATGTTTCGGG GCAACGGACAGACACCAGCGCTAGACATTGACCGTACAAACACGATCGTGCACCTCCGCACAGATAATCGGAACCACAACAAGGAACAACGCCGCCCCGGGCGGTTGCTTTCTTTATACGATCGATGCAGAAGCCTCACCCTGCAAGCAGCGCAAGCTAACTGCGATCAACTGGTACTGGTTGTGTTGATCGAGAGTTCTAGCCGTACGCCTGCCTTGGGAAAGGGTGGGTTCGGAGTGCTCTGCCGATCGTTGAAGAACGTGTGATAGAACCGCCGGGTGTGTGACACAGACAGAGCTTCGGGACGTTT CCCGCTAGAGAGCGCTCGCGCGCTTTTTAATACTATTTATAACCCATTACGTCATTCATGCGCGGGTGCACATTTCATTCGTTTCGTGATTAGTTTTGTTGCTCTCGCCATGAGTG ] [+] EMBL AL930011 [ gaTCGCCGAGGTGTG TCAGCATCGCGTGCAATGTGGGATGTTTCGGGGCAGCAACGGACAGACACCAGCGCTAGACATTGACCGTACAAACACGATCGTGCACCTCCGCACAGATAATCGGAACCACAACAAGGAACAACGCCGCCCCGGGCGGTTGCTTTCTTTATACGATCGATGCAGAAGCCTCACCCTGCAAGCAGCGCAAGCTAACTGCGATCAACTGGTACTGGTTGTGTTGATCGAGAGTTCTAGCCGTACGCCTGCCTTGGGAAAGGGTGGGTTCGGAGTGCTCTGCCGATCGTTGAAGAACGTGTGATAGAACCGCCGGGTGTGTGACACAGACAGAGCTTCGGGACGTTT CCCGCTAGAGAGCGCTCGCGCGCTTTTTAATACTATTTATAACCCATTACGTCATTCATGCGCGGGTGCACATTTCATTCGTTTCGTGATTAGTTTTGTTGCTCTCGCCATGAGTGCAGGAGAAGCGACGAGAAGCAAA ] [+] EMBL BM636230 [ ccgGCCGCCCCGGGCGGTTGCTTTCTTTATACGATCGATGCAGAAGCCTCACCCTGCAAGCAGCGCAAGCTAACTGCGATCAACTGGTACTGGTTGTGTTGATCGAGAGTTCTAGCCGTACGCCTGCCTTGGGAAAGGGTGGGTTCGGAGTGCTCTGCCGATCGTTGAAGAACGTGTGATAGAACCGCCGGGTGTGTGACACAGACAGAGCTTCGGGACGTTT CCCGCTAGAGAGCGCTCGCGCGCTTTTTAATACTATTTATAACCCATTACGTCATTCATGCGCGGGTGCACATTTCATTCGTTTCGTGATTAGTTTTGTTGCTCTCGCCATGAGTGCAGGAGAAGCGACGAGAAGCAAAAGAATACGAATAAGAGAGGGTGAAAGAGAGAGAGAGAGAAAGAGAGAGTGCTGCAGCGGCTGCAGCGTTAACAGTAGCCTCGGTCGAGATGGATTTAATTTAATTTTATCATTATTTTATTGGTATATGTGTTAAGCGCGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAATGTATTTATGTGTGTGTGGTGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAATGGCAAGGGTTTGAGCAATTCTATCTAGATAGGCAG ] [+] EMBL BX621494 [ TAAGAGAGGGTGAAAGAGAGAGAGAGAGAAAGAGAGAGTGCTGCAGCGGCTGCAGCGTTAACAGTAGCCTCGGTCGAGATGGATTTAATTTAATTTTATCATTATTTTATTGGTATATGTGTTAAGCGCGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAATGTATTTATGTGTGTGTGGTGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAATGGCAAGGGTTTGAGCAATTCTATCTAGATAGGCAGAGGCCACGTGCTGACGTGGGGGCAGAGTAGATGGCCATAGTAACAACAAAATCAAACACACAAAAATATGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAACATATCGGGCGCATACAAAGCATACACCAGACAAATTTAAACGATTTTGGGTACGAAGCGG AAGCACACGGAGAGTGCAGATGCGCTACTCGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAG TTTTTTAAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTAT ] [+] EMBL CNS09PYK [ TTGGTATATGTGTTAAGCGCGCGCGAGCGGCAACAGGGGTACGTTAAATTATTTCTCAATGTATTTA TGTGTGTGGTGCGCGCGGCCTGCAAATGGCGGAAGGTATGGCAAGTAATGGCAAGAGTTTGAGCAATTCTATCTAGAGAGGCAGAGGCCACGTGCTGACATGGGGGCAGAGTAGATGGCCATAGTAACAACAAAATCAAACACACAAAAATATGTCAAAGATACGTCAGCACAGCATAAC ATACAAAAGCAACAAATCGGGCGCACACAAAGCATACACCAGACAAATTTAAACGATTTTGGGTGCGAA CGGAAAGCACACGGAGAGTGCAGATGCGCTACTCGGGTGCCGAA GTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAGTTTTTTTAAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTATGCTTATTTGTTTGTTTTTTTTTTTTACTATACACTTTACCTTTTTTCTTTCGTATTTCTCGCAAGGCAAATGGGAAG TAATTAGTGCAACCCGGTTTTTAGGCCCCCAAAACACAGAAATGTTTTAGGCTGTAATGAGAAGAAAG GAACG GGG TGAACAGACAAGATAGGCAACACAAATGTTGTAAGACATATTCTCGCAAATCGTAGATGGAAAAGACAAAAAAACGCCATTAAAGGGGCGTACACTAGTGGTAAGCTACTGTGAGCTAGTATAGCGACGAAAGGAAGGAATCAAATAATTGTGATGTATTAATGGTTAGGGATCTTGTGCC AGGGGATGGAAGCGTACAACCTGTCAGGTGGAACACATCCCCCTCCGGAAACAAGATGCGCAAGGAGTGAAGCATTATGTAAAGCAAACCCAGGCAAACATGCTTAAAATGGTACGTCTGTTTGAAGATAAGTGTGAT ] [+] EMBL BX613152 [ TTGGGTACGAAGCGG AAGCACACGGAGAGTGCAGATGCGCTACTCGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAG TTTTTTAAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTATGCTTATTTGTTTGTTTTTTTTTTTTACTATACACTTTACCTTTTTTCTTTCGTATTTCTCGCAAGGCAAATGGGAAGTTAATTGGTGCAACCCGGTTTTTTGGACCCCAAAACACAGAAATGTTTTAGGCTGTACTGAGAAGAAAGTGAACGGGAGCAAGGGTTGAACAGACAAGATAGGCAATACAAATGTTGTAAGACATATTCTCGCAAATCGTAGATGGAAAAGAC AAAAAACGCCATTACAGGGGCGTACGCTAGTGGTAAGCTACTGTGAGCTAGTATAGCGACGAAAGGAAGGAATCAAATAATTGTGATGTATTAATGGTTAGGGATCTTGTGCCAAGGGGATGGAAGCGTAGCACCTGTCAGGTGGAACACATCCCCCCCCGGAAACAAGATGCGCAAGGAGTGAAGCATTATGTAAAGCAAACCCAGGCAAACATGCTTCAGATGGTACGTCTGTTTGAAGATAAGTGTGATTAATTTTGTTGACGAATGTCGAACTCCAAAGGTAGCATTGAGGTGCGGTGTGTTTTGAGATGTATTTCAAAAATGC AAGTGAAATAAAATAATT] [+] EMBL BX627155 [ TACTCGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAG TTTTTTTAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTATGCTTATTTGTTTGTTTTTTTTTTTTACTATACACTTTACCTTTTTTCTTTCGTATTTCTCGCAAGGCAAATGGGAAG TAATTAGTGCAACCCGGTTTTTAGGTCCCCAAAACACAGAAATGTTTTAGGCTGTAATGAGAAGAAAG GAA G GGT TGAACAGACAAGATAGGCAACACAAATGTTGTAAGACATATTCTCGCAAATCGTAGATGGAAAAGACAAAAAAACGCCATTACAGGGGCGTACACTAGTGGTAAGCTACTGTGAGCTAGTATAGCGACGAAAGGAAGGAATCAAATAATTGTGATGTATTAATGGTTAGGGATCTTGTGCC AGGGGATGGAAGCGTAGCACCTGTCAGGTGGAACACATCCCCCTCCGGAGACAAGATGCGCAAGGAGTGAAGCATTATGTAAAGCAAACCCAGGCAAACATGCTTCAGATGGTACGTCTGTTTGAAGATAAGTGTGATTAATTTTGTTGACGAATGTCGAACTCCAAAGGTAGCATTGAGGTGCGGTGTGTTTTGAGATGTATTTC AAAATGCAAAGTGA ] [-] EMBL CNS09PYL [ GGTATTCCAAATAATTTGGAGAAGTTTTTTTAAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTATGCTTATTTGTTTGTTTTTTTTTTTTACTATACACTTTACCTTTTTTCTTTCGTATTTCTCGCAAGGCAAATGGGAAG TAATTAGTGCAACCCGGTTTTTAGGCCCCCAAAACACAGAAATGTTTTAGGCTGTAATGAGAAGAAAG GAACG GGG TGAACAGACAAGATAGGCAACACAAATGTTGTAAGACATATTCTCGCAAATCGTAGATGGAAAAGACAAAAAAACGCCATTACAGGGGCGTACACTAGTGGTAAGCTACTGTGAGCTAGTATAGCGACGAAAGGAAGGAATCAAATAATTGTGATGTATTAATGGTTAGGGATCTTGTGCC AGGGGATGGAAGCGTAGCACCTGTCAGGTGGAACACATCCCCCTCCGGAAACAAGATGCGCAAGGAGTGAAGCATTATGTAAAGCAAACCCAGGCAAACATGCTTCAGATGGTACGTCTGTTTGAAGATAAGTGTGATTAATTTTGTTGACGAATGTCGAACTCCAAAGGTAGCATTGAGGTGCGGTGTGTTTTGAGATGTATTTC AAAATGCAAAGTGAAATAAAAT ] consensusID : consensus_8858#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1078 fasta sequence [GAGCAGATTGGCCCAGGCTTAATATGCTGTTTTTTTTTTACTTTTNGTCGTGCTGACGTGGGGGCAGAGTAGATGGCCATAGTAACAACAAAATCAAACACACAAAAATATAGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAACATATACGCGGCGCATACAAAGCATACACCAGACAAATTTAACACGATTTATGGGTACGAAGCGGAAGCACACGGAGAGTGCNGATGCGCTACCTACGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATNTCCAAATAATTTGGGCCGACAGCTANCTCTTCNCACACANAACAGTCTAAANTCNTATAAAGCGGTATACTNNGGGGATTACAAAGGCTNNTAGCGTTNATTGCCTANACTCNCNNGGGACNAGGNNCACACNCACGCACACCCACTCNACCTAAATAAGCACCTTATTCAGCCCCTTTTTGCCCTCTNTCGGCTCACTTCNTCACCCTTACCAGCCAANAAGGAGGAGCACAACCACATAGGACCGGGCAAACGACCTCCTCACCAGTACANCCAGGGCNAAGGCCAAAAACACCCCCCCGCGGACACACAACAAACACACGGGGCACACCCCCCCGAACAGAAGAACCAACGCGAANANACNAACAAAGGGAANTAAAGAGGGCACACACAACATAACCNACAACACANANGGTGAACAGGCACAAANGNAACACCAATAAATTAAACCCCATACCNGGCCGCACAACACACATCCCCGGCGCACACGCAACCATTGGCGCACACNAACACAGGAAAGCCAAACAGACCAGACAACAACCNCCGGCCNCCCCANACTAGCAACCCAANCGGGGGCGGCCCGGACGTNACCACGCCCATAAACACGCNTGGGGCATCAAAACAGCCCTATACACGCCCNGACGACGTGCCACACGCCCCGNCACANCATTACCACTCAANCGCCCGGCGAACACNNGAACCACAAAGGNGGGCAACNGGCGGCAAAATTNCCAGAAGCAGCCAGNTAAAACACAGANCAACGAGCAACNGGCAAGCAGGGCGACACCATCA] [+] EMBL AL695960 [GAGCAGATTGGCCCAGGCTTAATATGCTGTTTTTTTTTTACTTTTNGTCGTGCTGACGTGGGGGCAGAGTAGATGGCCATAGTAACAACAAAATCAAACACACAAAAATATAGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAACATATACGCGGCGCATACAAAGCATACACCAGACAAATTTAACACGATTTATGGGTACGAAGCGGAAGCACACGGAGAGTGCNGATGCGCTACCTACGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATNTCCAAATAATTTGGGCCGACAGCTANCTCTTCNCACACANAACAGTCTAAANTCNTATAAAGCGGTATACTNNGGGGATTACAAAGGCTNNTAGCGTTNATTGCCTANACTCNCNNGGGACNAGGNNCACACNCACGCACACCCACTCNACCTAAATAAGCACCTTATTCAGCCCCTTTTTGCCCTCTNTCGGCTCACTTCNTCACCCTTACCAGCCAANAAGGAGGAGCACAACCACATAGGACCGGGCAAACGACCTCCTCACCAGTACANCCAGGGCNAAGGCCAAAAACACCCCCCCGCGGACACACAACAAACACACGGGGCACACCCCCCCGAACAGAAGAACCAACGCGAANANACNAACAAAGGGAANTAAAGAGGGCACACACAACATAACCNACAACACANANGGTGAACAGGCACAAANGNAACACCAATAAATTAAACCCCATACCNGGCCGCACAACACACATCCCCGGCGCACACGCAACCATTGGCGCACACNAACACAGGAAAGCCAAACAGACCAGACAACAACCNCCGGCCNCCCCANACTAGCAACCCAANCGGGGGCGGCCCGGACGTNACCACGCCCATAAACACGCNTGGGGCATCAAAACAGCCCTATACACGCCCNGACGACGTGCCACACGCCCCGNCACANCATTACCACTCAANCGCCCGGCGAACACNNGAACCACAAAGGNGGGCAACNGGCGGCAAAATTNCCAGAAGCAGCCAGNTAAAACACAGANCAACGAGCAACNGGCAAGCAGGGCGACACCATCA] consensusID : consensus_8858#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 754 fasta sequence [AATCCCCCGNGGTTATGTNGGTGGCAGAGTAGATGGCCATAGTACAACAAAATCAAACACACAAAAATATGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAACATATCGGGCGCATACAAAGCATACACCAGACAAATTTAAACGATTTTGGGTACGAAGCGGAAGCACACGGAGAGTGCAGATGCGCTACTCGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAGTTTNCTTAAACAATTAATTTTAGGTTATTGGATAAAGTTNGGTTATGCTTATTGTTGTTCTATTNCNTTTACTATACACTTATACCTTTATTACTTTACGTATNTCTCGCAAGGCAAATGGGAAGTTAACTTGGTGCAACCCGGGTATTATTTGGACCCCAAAACACAGAAATGTNTCTAGGCTGTACTGAGAAGAAAGTGAACGGGAGCAAGGGTTGAACAGACAAGATAGGCAATACAAATGTTGTANGACATATTCTCGCAAATCGTCAGATGGACAAGACCAGCAGACGCAGCAANCAGGAACAGGCACGAATCCCAACGAACTCGAACTGATAAACTTAACAACAAGCGCGGCCCGAAAGCGAANGCTGGNGTTGGAGTGGCACACGGGCAAAGGCCACAAGGAAAATTTCAACANAACAAAACAAANACGACACAGCTATGTTACACCGGGAAAAGCTTCCAGAGTGTTGTGTTGCAAAGGATCATCTTCCT] [+] EMBL AL692332 [AATCCCCCGNGGTTATGTNGGTGGCAGAGTAGATGGCCATAGTACAACAAAATCAAACACACAAAAATATGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAACATATCGGGCGCATACAAAGCATACACCAGACAAATTTAAACGATTTTGGGTACGAAGCGGAAGCACACGGAGAGTGCAGATGCGCTACTCGGGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAAGTTTNCTTAAACAATTAATTTTAGGTTATTGGATAAAGTTNGGTTATGCTTATTGTTGTTCTATTNCNTTTACTATACACTTATACCTTTATTACTTTACGTATNTCTCGCAAGGCAAATGGGAAGTTAACTTGGTGCAACCCGGGTATTATTTGGACCCCAAAACACAGAAATGTNTCTAGGCTGTACTGAGAAGAAAGTGAACGGGAGCAAGGGTTGAACAGACAAGATAGGCAATACAAATGTTGTANGACATATTCTCGCAAATCGTCAGATGGACAAGACCAGCAGACGCAGCAANCAGGAACAGGCACGAATCCCAACGAACTCGAACTGATAAACTTAACAACAAGCGCGGCCCGAAAGCGAANGCTGGNGTTGGAGTGGCACACGGGCAAAGGCCACAAGGAAAATTTCAACANAACAAAACAAANACGACACAGCTATGTTACACCGGGAAAAGCTTCCAGAGTGTTGTGTTGCAAAGGATCATCTTCCT] consensusID : consensus_8858#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 349 fasta sequence [GTACTACTTACGGGGGAGGGGGACAGAGTGTGATAGTAAAGATAGTGATAGAAGGGAAAGAGAGATAGAGAGAGAGAGAGAGTGCTGCAGCGGCTGCAGCGTTAACAGTAGCCTCGGTCGAGATGGATTTAATTTAATTTTATCATTATTTTATTGGTATATGTGTTAAGCGCGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAATGTATTTATGTGTGTGTGGTGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAATGGCAAGGGTTTGAGCAATTCTATCTAGATAGGCANAGGCCACGTGCTGACGTGGGGGCANAGTACATGGCCATAGTAA] [+] EMBL BX625266 [GTACTACTTACGGGGGAGGGGGACAGAGTGTGATAGTAAAGATAGTGATAGAAGGGAAAGAGAGATAGAGAGAGAGAGAGAGTGCTGCAGCGGCTGCAGCGTTAACAGTAGCCTCGGTCGAGATGGATTTAATTTAATTTTATCATTATTTTATTGGTATATGTGTTAAGCGCGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAATGTATTTATGTGTGTGTGGTGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAATGGCAAGGGTTTGAGCAATTCTATCTAGATAGGCANAGGCCACGTGCTGACGTGGGGGCANAGTACATGGCCATAGTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8858#0 CCGCCCACGCGTCCGCCCACGCGTCCGCAGAACGACGCGATCCGAGCATAGGACAGCCGA 60 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 CCACCATCATCACCATCACCAGAAGAAGAATGCAGACAAACGACTGAGACGCACAGTGAG 120 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 CAAAAAATGGCAAACAAAATTTTGCGAACCGGTTCGGTTCTGTTTTTTTTTGCTTCAAAC 180 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 GAAACGCAGACCCAAAACGACGACGTTATGAATCTTCCAAAACGGATAGAGACGAGCTTT 240 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 TCAAACATTCCAGTCGAGGAGCTGTGTCAGCATCGCGTGCAATGTGGGATGTTTCGGGGC 300 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 AGCAACGGACAGACACCAGCGCTAGACATTGACCGTACAAACACGATCGTGCACCTCCGC 360 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 ACAGATAATCGGAACCACAACAAGGAACAACGCCGCCCCGGGCGGTTGCTTTCTTTATAC 420 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 GATCGATGCAGAAGCCTCACCCTGCAAGCAGCGCAAGCTAACTGCGATCAACTGGTACTG 480 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 GTTGTGTTGATCGAGAGTTCTAGCCGTACGCCTGCCTTGGGAAAGGGTGGGTTCGGAGTG 540 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 CTCTGCCGATCGTTGAAGAACGTGTGATAGAACCGCCGGGTGTGTGACACAGACAGAGCT 600 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ---------------------------GAGCAGATTGGCCCAGGCTTAATATGCTGTTTT 33 consensus_8858#0 TCGGGACGTTTCCCGCTAGAGAGCGCTCGCGCGCTTTTTAATACTATTTAT-AACCCATT 659 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 -------AATCCCCCGNGGTTATGTNGGTGGCAGAGTAGATGGCCATAGTA-CAACAAAA 52 consensus_8858#1 TTTTTTACTTTTNGTCGTGCTGACGTGGGGGCAGAGTAGATGGCCATAGTAACAACAAAA 93 consensus_8858#0 ACGTCATTCATGCGCGGG-TGCACATTTCATTCGTTTCGTGATTAGTTTTGTTGCTCTCG 718 consensus_8858#3 -----------------------------------------------------GTACTAC 7 consensus_8858#2 TCAAACACACAAAAATAT-GTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAAC 111 consensus_8858#1 TCAAACACACAAAAATATAGTCAAAGATACGTCAGCACGACAAAACAAAAGAAAAACAAC 153 * consensus_8858#0 CCA--TGAGTGCAGGAGAAGCGACGAGAAGCAAAAGAATACGA--ATAAGAGAGGGTGAA 774 consensus_8858#3 TTA--CGGGGGAGGGGGACAGAGTGTGATAGTAAAGAT----A--GTGATAGAAGG-GAA 58 consensus_8858#2 ATA--TCGGGCGCATACAAAGCATACACCAGACAAATTTAAAC--GATTTTGGGTACGAA 167 consensus_8858#1 ATATACGCGGCGCATACAAAGCATACACCAGACAAATTTAACACGATTTATGGGTACGAA 213 * * * ** * *** consensus_8858#0 AGAGAGAGAGAGAGAAAGAGAGAGTGC------TGCAGCGGCTGCAGCGTTAACAGTAGC 828 consensus_8858#3 AGAGAGATAGAGAGAGAGAGAGAGTGC------TGCAGCGGCTGCAGCGTTAACAGTAGC 112 consensus_8858#2 GCGGAAGCACACGGAGAGTGCAGATGCGCTA--CTCGGGTGCCGAAGGTTTCATCCCAAA 225 consensus_8858#1 GCGGAAGCACACGGAGAGTGCNGATGCGCTACCTACGGGTGCCGAAGGTTTCATCCCAAA 273 ** * * ** ** * *** * * ** * ** ** * * consensus_8858#0 CTCGGTCGAGATGG--ATTTAATTT--------AATTTTATCATTATTT---TATTGGTA 875 consensus_8858#3 CTCGGTCGAGATGG--ATTTAATTT--------AATTTTATCATTATTT---TATTGGTA 159 consensus_8858#2 ATTGAACGGTATTCC-AAATAATTTGG------AGAAGTTTNCTTAAAC---AATTAATT 275 consensus_8858#1 ATTGAACGGTATNTCCAAATAATTTGGGCCGACAGCTANCTCTTCNCACACANAACAGTC 333 * * ** ** * ****** * * * * * consensus_8858#0 TATG----TGTTAAGCG---CGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAA 928 consensus_8858#3 TATG----TGTTAAGCG---CGCCCGAGCGGGAACAGGGGTACGTTAAATTATTTCTCAA 212 consensus_8858#2 TTAGGT--TATTGGATA---AAGTTNGGTTATGCTTATTGTTGTTCTATTNCNTTTACTA 330 consensus_8858#1 TAAANTCNTATAAAGCGGTATACTNNGGGGATTACAAAGGCTNNTAGCGTTNATTGCC-- 391 * * * * * * * ** * consensus_8858#0 TGTATTTATGTGTGTGTGG-TGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAAT 987 consensus_8858#3 TGTATTTATGTGTGTGTGG-TGCGCGCGGCCTGCAAATGGCTGAAGGTATGGCAAGTAAT 271 consensus_8858#2 TACACTTATACCTTTATTACTTTACGTATNTCTCGCAAGGCAAATGGGAAGTTAACTTGG 390 consensus_8858#1 TANACTCNCNNGGGACNAGGNNCACACNCACGCACACCCACTCNACCTAAATAAGCACCT 451 * * * * * * * consensus_8858#0 GGCAAGGGTTTGAGCAATTCTATCTAGATAGGCAGAGG---CCACGTGCTGACGTGGGGG 1044 consensus_8858#3 GGCAAGGGTTTGAGCAATTCTATCTAGATAGGCANAGG---CCACGTGCTGACGTGGGGG 328 consensus_8858#2 TGCAACCCGGGTATTATTTGGACCCCAAAACACAGAAATGTNTCTAGGCTGTACTGAGAA 450 consensus_8858#1 TATTCAGCCCCTTTTTGCCCTCTNTCGGCTCACTTCNTCACCCTTAC-CAGCCAANAAGG 510 * * * consensus_8858#0 CAGAGTAGATGGCCATAGTAACAACAAAATCAAACACACAAAAATATGTCAAAGATACGT 1104 consensus_8858#3 CANAGTACATGGCCATAGTAA--------------------------------------- 349 consensus_8858#2 GAAAGTGAACGGGAGCAAGGGTTGAACAGACAAGATAGGCAATACAAATGTTGTANGACA 510 consensus_8858#1 AGGAGCACAACCACATAGGACCGGGCAAACGACCTCCTCACCAGTACANCCAGGGCNAAG 570 ** * * consensus_8858#0 CAGCACGACAAAACAAAAGAAAAACAACATATCGGGCGCATACAAAGCATACACCAGACA 1164 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 TATTCTCGCAAATCGTCAGATGGACAAGACCAGCAGACGCAGCAANCAGGAACAGGCACG 570 consensus_8858#1 GCCAAAAACACCCCCCCGCGGACACACAACAAACACACGGGGCACACCCCCCCGAACAGA 630 consensus_8858#0 AATTTAAACGATTTTGGGTACGAAGCGGAAGC-ACACGGAGAGTGCAGATGCGCTACTCG 1223 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 AATCCCAACGAACTCGAACTGATAAACTTAAC-AACAAGCGCGGCCCGAAAGCGAANGCT 629 consensus_8858#1 AGAACCAACGCGAANANACNAACAAAGGGAANTAAAGAGGGCACACACAACATAACCNAC 690 consensus_8858#0 GGTGCCGAAGGTTTCATCCCAAAATTGAACGGTATTCCAAATAATTTGGAGAA-GTTTTT 1282 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 GGNGTTGGAGTGGCACACGGGCAAAGGCCACAAGGAAAATTTCAACANAACAA-AACAAA 688 consensus_8858#1 AACACANANGGTGAACAGGCACAAANGNAACACCAATAAATTAAACCCCATACCNGGCCG 750 consensus_8858#0 TAAAAATTAATTTTAGGTTATTGGATAAAGTTAGGTTATGCTTATTTGTTTGTTTTTTTT 1342 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 NACGACACAGCTATGTTACACCGGGAAAAGCTTCCAGAGTGTTGTGTTGCAAAGGATCAT 748 consensus_8858#1 CACAACACACATCCCCGGCGCACACGCAACCATTGGCGCACACNAACACAGGAAAGCCAA 810 consensus_8858#0 TTTTACTATACACTTTACCTTTTTTCTTTCGTATTTCTCGCAAGGCAAATGGGAAGTAAT 1402 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 CTTCCT------------------------------------------------------ 754 consensus_8858#1 ACAGACCAGACAACAACCNCCGGCCNCCCCANACTAGCAACCCAANCGGGGGCGGCCCGG 870 consensus_8858#0 TAGTGCAACCCGGTTTTTAGGCCCCCAAAACACAGAAATGTTTTAGGCTGTAATGAGAAG 1462 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ACGTNACCACGCCCATAAACACGCNTGGGGCATCAAAACAGCCCTATACACGCCCNGACG 930 consensus_8858#0 AAAGGAACGGGGTGAACAGACAAGATAGGCAACACAAATGTTGTAAGACATATTCTCGCA 1522 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ACGTGCCACACGCCCCGNCACANCATTACCACTCAANCGCCCGGCGAACACNNGAACCAC 990 consensus_8858#0 AATCGTAGATGGAAAAGACAAAAAAACGCCATTACAGGGGCGTACACTAGTGGTAAGCTA 1582 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 AAAGGNGGGCAACNGGCGGCAAAATTNCCAGAAGCAGCCAGNTAAAACACAGANCAACGA 1050 consensus_8858#0 CTGTGAGCTAGTATAGCGACGAAAGGAAGGAATCAAATAATTGTGATGTATTAATGGTTA 1642 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 GCAACNGGCAAGCAGGGCGACACCATCA-------------------------------- 1078 consensus_8858#0 GGGATCTTGTGCCAGGGGATGGAAGCGTAGCACCTGTCAGGTGGAACACATCCCCCTCCG 1702 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 GAAACAAGATGCGCAAGGAGTGAAGCATTATGTAAAGCAAACCCAGGCAAACATGCTTCA 1762 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 GATGGTACGTCTGTTTGAAGATAAGTGTGATTAATTTTGTTGACGAATGTCGAACTCCAA 1822 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 AGGTAGCATTGAGGTGCGGTGTGTTTTGAGATGTATTTCAAAATGCAAGTGAAATAAAAT 1882 consensus_8858#3 ------------------------------------------------------------ consensus_8858#2 ------------------------------------------------------------ consensus_8858#1 ------------------------------------------------------------ consensus_8858#0 AATT 1886 consensus_8858#3 ---- consensus_8858#2 ---- consensus_8858#1 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||