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Anopheles gambiae
cluster # 8860 cluster # 8860       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8860#0 length = 1284 sequences # 6  
consensus_8860#1 length = 609 sequences # 4  
consensus_8860#2 length = 502 sequences # 1  
consensus_8860#3 length = 422 sequences # 1  

consensusID : consensus_8860#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1284
fasta sequence
                              [AGAATCGCCCCGAGGTTACAAAAGCGCGCATTGACAGTTCGCGCTCGCCGAATGTAAACAAGCATGTGCGAATAAACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGACTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCACCGGTACACCACCAA-GGTTAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGGGTCCGCATCAAGTGCAACAATACGGCGGTGCCTGAGGAAATACACGACGCGATGATCCGCTGCGCCAAGGACCATCCACTGAAAAGCCTGATAGCCGATGGGCAACGGTTGAGCAATTGCGTTCGCTCGCGCAA-ATGGTACCCGCTCG-ACGGTACGGCCCCGAACCGGGGTGCGGAACGGGCGATCGAACGGACGCCGCCCAGTGCCCGGCGGCAGGACGCGTCCGTGTTTGACCTGCACGACGAG-TACAGCTGCCTGACGCAGCTGTTCGGCCGGTCCGATGCGGAGTACGCGGTGCTGCGGCGCATCTTCACCGAGATTGCCCAGCGCGATCC-GGAGCTGCGGCCGCGCA-CTTCTCTCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACAAGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGTGTGCGCAACCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGACGACGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGGTGCGCTCCAAGCATTGCGTGTGTCACGTTTGCGCGGCGGACGGACAGCTGCGTGACGTTTCCTTTACCACGTCGAAACACGGCCAGATTGTACATCGATGCGCCAAGGCTAGCCGGTGGGGCGATCTACTTCCAATGCGTATCCAGTGGTTAAATGGCGCGGAGGACGACGAGCACAGCGTGGAGACTTGAGGCGGACTAGTTTGCTGATTTGAAATTGTGATTAGATGTGAATAGCAGAAAAATAAAAGTGT]

[+] EMBL AL932282             [AGAATCGCCCCGAGGTTACAAAAGCGCGCATTGACAGTTCGCGCTCGCCGAATGTAAACAAGCATGTGCGAATAAACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGACTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCACCGGTACACCACCAAGGGTTAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGGGTCCGCATCAAGTGCAACAATACGGCGGTGCCTGAGGAAATACACGACGCGATGATCCGCTGCGCCAAGGACCATCCACTGAAGAGTCTGATAGCCGATGGGCAACGATTGAACAATTGCGTTCGCTCGCGCAANATGGTATCCGCTCGCATGGTACGGCCCCGAACCGGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09JY8             [                                                                          AACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGGCTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCTCCGGTACACCACCAA GGTAAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGCGGCCGCATCAAGTGCAACAATACGGCCGTGCCGCCGGAGATACACGACGCGATGATTCGCTGCGCCAAGGACCATCCACTGAAAAGCCTGATAGCCGATGGGCAACGGTTGAGCAATTGCGTTCGCTCGCGCAA ATGGTACCCGCTCG ACGGTACGGCCCCGAACCGGGGTGCGGAACGGGCGATCGAACGGACGCCGCCCAGTGCCCGGCGGCAGGACGCGTCCGTGTTTGACCTGCACGACGAG TACAGCTGCCTGACGCAGCTGTTCGGCCGGTCCGATGCGGAGTACGCGGTGCTGCGGCGCATCTTCACCGAGATTGCCCAGCGCGATCC GGAGCTGCGGCCGCGCA CTTCTCTCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACAAGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGTGTGCGCAACCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGACGACGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGGTGC                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09JY9             [                                                                                                                                                                                                                                                                                                                                                                                       ACCATCCACTGAAAAGCCTGATAGCCGATGGGCAACGGTTGAGAAATTGCGTTTG TCGCGCAA AT GTACCCGCTCG ACGGTACGGCCCCGAACCGGGGTGCGGAACGGGCGATCGAACGGACGCCGCCCAGTGCCCGGCGGCAGGACGCGTCCGTGTTTGACCTGCACGACGAGTTACAGCTGCCTGACGCAGCTGTTCGGCCGGTCCGATGCGGAGTACGCGGTGCTGCGGCGCATCTTCACCGAGATTGCCCAGCGCGATCCGGGAGCTGCGGCCGCGCAGCTT TCTCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACAAGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGTGTGCGCAACCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGACGACGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGGTGCGCTCCAAGCATTGCGTGTGTCACGTTTGCGCGGCGGACGGACAGCTGCGTGACGTTTCCTTTACCACGTCGAAACACGGCCAGATTGTACATCGATGCGCCAAGGCTAGCCGGTGGGGCGATCTACTTCCAATGCATATCCAGTGGTTAAATGGCGCGGAGGACGACGAGCACAGCGTGGAGACTTGAGGCGGACTAGTTTGCTGATTTGAAATTGTGATTAGATGTGAATAGCAGAAAAATAAAAGTGT]
[-] EMBL AGA281792            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGGACGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGACGATGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGGTGCGCTCCAAGCATTGCGTGTGTCACGTTTGCGCGGCGGACGGACAGCTGCGTGACGTTTCCTTTACCACGTCGAAACACGGCCAGATTGTACATCGATGCGCCAAGGCTAGCCGGTGGGGCGATCTACTTCCAATGCGTATCCAGTGGTTAAATGGCGCGGAGGACGACGAGCACAGCGTGGAGACTTGAGGCGGACTAGTTT                                                 ]
[-] EMBL AGA285775            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATCAAGGACGCTGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTGGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGGTGCGCTCCAAGCATTGCGTGTGTCACGTTTGCGCGGCGGACGGACAGCTGCGTGACGTTTCCTTTACCACGTCGAAACACGGCCAGATTGTACATCGATGCGCCAAAGCTAGCCGATGGGGCGATCTACTTCCAATGCGTATTCAGTGGTTGAATGGCGCGGAGGACGACGAACACAGCGTGGAGACTTGAGGCGGACTGATTT                                                 ]
[-] EMBL AGA282754            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCGGACGGCGGTGCGCTCCAAGCATTGCGTGTGTCACGTTTGCGCGGCGGACGGACAGCTGCGTGACGTTTCCTTTACCACGTCGAAACACGGCCAGATTGTACATCGATGCGCCAAGGCTAGCCGGTGGGGCGATCTACTTCCAATGCGTATCCAGTGGTTAAATGGCGCGGAGGACGACGAGCACAGCGTGGAGACTTGAGGCGGACTAGTTTGCTGATTTGAAATTGTGATTAGATGTGAATAGAAGAGAAATAAAAG   ]


>consensus_8860#0 AGAATCGCCCCGAGGTTACAAAAGCGCGCATTGACAGTTCGCGCTCGCCGAATGTAAACA AGCATGTGCGAATAAACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGACTTGCACA ATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTT TCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCACCGGTACACCACCAAGGTTAGGTG TGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCA CCGGGTCCGCATCAAGTGCAACAATACGGCGGTGCCTGAGGAAATACACGACGCGATGAT CCGCTGCGCCAAGGACCATCCACTGAAAAGCCTGATAGCCGATGGGCAACGGTTGAGCAA TTGCGTTCGCTCGCGCAAATGGTACCCGCTCGACGGTACGGCCCCGAACCGGGGTGCGGA ACGGGCGATCGAACGGACGCCGCCCAGTGCCCGGCGGCAGGACGCGTCCGTGTTTGACCT GCACGACGAGTACAGCTGCCTGACGCAGCTGTTCGGCCGGTCCGATGCGGAGTACGCGGT GCTGCGGCGCATCTTCACCGAGATTGCCCAGCGCGATCCGGAGCTGCGGCCGCGCACTTC TCTCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGA CAAGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGTGT GCGCAACCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCC CCACAGCATGGGCTGCCCGCGGATGATCAAGGACGACGGTACGCCGTGCAACTTTGAGGC CACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTC GTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACG CCCGACGGCGGTGCGCTCCAAGCATTGCGTGTGTCACGTTTGCGCGGCGGACGGACAGCT GCGTGACGTTTCCTTTACCACGTCGAAACACGGCCAGATTGTACATCGATGCGCCAAGGC TAGCCGGTGGGGCGATCTACTTCCAATGCGTATCCAGTGGTTAAATGGCGCGGAGGACGA CGAGCACAGCGTGGAGACTTGAGGCGGACTAGTTTGCTGATTTGAAATTGTGATTAGATG TGAATAGCAGAAAAATAAAAGTGT



consensusID : consensus_8860#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 609
fasta sequence
                              [TCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACCACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGACCTGGTGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTATCGGCAG-TTTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCGATCAACCGTCCCGGCGGCGGCTGGACGAGCTGGTGGACCAGCTGTACGGCACGTTCGACAAGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGCGTGCGCAATCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGACGATGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGG]

[+] EMBL AGA284470            [TCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACCACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGAGCTGGTGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTACCGGCAG TTTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCGATCAACCGTCCCGGCGGCGGCTGTACGAGCTGGTGGACCAGCTGTACGGCACGTTCGACAAGTATCTGATCCTGGTGGAGCA                                                                                                                                                                                                                                                                                               ]
[+] EMBL AGA281126            [TCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACCACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGACCTGGTGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTATCGGCAGTTTTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCGATCAACCGTCCCGGCGGCGGCTGGACGAGCTGGTGGACCAGCTGTACGGCACGTTCCACAAGTATCTGATCCTGG                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AGA280095            [TCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACCACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGACCTGGTGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTATCGGCAG TTTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCGATCAACCGTCCCGGCGGCGGCTGGACGAGCTGGTGGACCAGCTGTACGGCACGTTCGACA                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM656701             [                ccgCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACCACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGACCTGGTGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTATCGGCAG TTTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCGATCAACCGTCCCGGCGGCGGCTGGACGAGCTGGTGGACCAGCTGTACGGCACGTTCGACAAGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGCGTGCGCAATCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGACGATGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGG]


>consensus_8860#1 TCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACC ACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGACCTGG TGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTATCGGCAGT TTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCG ATCAACCGTCCCGGCGGCGGCTGGACGAGCTGGTGGACCAGCTGTACGGCACGTTCGACA AGTATCTGATCCTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGCGTGC GCAATCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCCCC ACAGCATGGGCTGCCCGCGGATGATCAAGGACGATGGTACGCCGTGCAACTTTGAGGCCA CCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTCGT ACCTGGTGTACAGGAGGAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCGTACGCC CGACGGCGG



consensusID : consensus_8860#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 502
fasta sequence
                              [GCAGAATCGCCACGAGGTTAATAACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGACTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCACCGGTACACCACCAAGGTTAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGGGTCCGCATCAAGTGCAACAATACGGCGGTGCCTGAGGAAATACACGACGCGATGATCCGCTGCGCCAAGGACCATCCACTGAAGCAGTCTGATAGCCCGATGGGCAAACGGATTTGAGACAATTGCGTTTCGCTCGNCGCAAATGGTATCCGGTTCGAATGGGTACTGGCCCCGGAACCCGGGGTTCCGAAACCGGGGCGAATCGAAACGGACGNNCCCGGCCCAGTTGCCCGGGGGGCAGGGACGGCNG]

[+] EMBL BX469070             [GCAGAATCGCCACGAGGTTAATAACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGACTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCACCGGTACACCACCAAGGTTAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGGGTCCGCATCAAGTGCAACAATACGGCGGTGCCTGAGGAAATACACGACGCGATGATCCGCTGCGCCAAGGACCATCCACTGAAGCAGTCTGATAGCCCGATGGGCAAACGGATTTGAGACAATTGCGTTTCGCTCGNCGCAAATGGTATCCGGTTCGAATGGGTACTGGCCCCGGAACCCGGGGTTCCGAAACCGGGGCGAATCGAAACGGACGNNCCCGGCCCAGTTGCCCGGGGGGCAGGGACGGCNG]


>consensus_8860#2 GCAGAATCGCCACGAGGTTAATAACAACAAACAGTGCACGCGTTTCGCAGCGTACACCGA CTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGC AAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCACCGGTACACCACCAAG GTTAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCT CGCAAGCACCGGGTCCGCATCAAGTGCAACAATACGGCGGTGCCTGAGGAAATACACGAC GCGATGATCCGCTGCGCCAAGGACCATCCACTGAAGCAGTCTGATAGCCCGATGGGCAAA CGGATTTGAGACAATTGCGTTTCGCTCGNCGCAAATGGTATCCGGTTCGAATGGGTACTG GCCCCGGAACCCGGGGTTCCGAAACCGGGGCGAATCGAAACGGACGNNCCCGGCCCAGTT GCCCGGGGGGCAGGGACGGCNG



consensusID : consensus_8860#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 422
fasta sequence
                              [TCGCCAAATAGAAGAAGAAGAAGGCTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCTCCGGTACACCACCAAGGTAAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGAGGCCGCATCAAGTGCAACAATACGGCCGTGCCGCCGGAGATACACGACGCGATGATTCGCTGCGCCAAGGACCATCCACTGAAGAGTCTGATAGCCGATGGGCAACGATTGAACAATTGCCTTCGCTCGCGCAAATGGTATCCGCTCGATGGTACGGCCCCGAATCGGGGTGCGGAACGGGCGATCGAACGGACGCCGCCCAGTGC]

[+] EMBL BX603968             [TCGCCAAATAGAAGAAGAAGAAGGCTTGCACAATATCACAAGATGAGTGTTTTTCTAAGCAACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTCGGTAAGCTCCGGTACACCACCAAGGTAAGGTGTGAGCTCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGAGGCCGCATCAAGTGCAACAATACGGCCGTGCCGCCGGAGATACACGACGCGATGATTCGCTGCGCCAAGGACCATCCACTGAAGAGTCTGATAGCCGATGGGCAACGATTGAACAATTGCCTTCGCTCGCGCAAATGGTATCCGCTCGATGGTACGGCCCCGAATCGGGGTGCGGAACGGGCGATCGAACGGACGCCGCCCAGTGC]


>consensus_8860#3 TCGCCAAATAGAAGAAGAAGAAGGCTTGCACAATATCACAAGATGAGTGTTTTTCTAAGC AACTTCAGAGTGCCACACTGCAGCAAAGGCTTTCAGCTGTGCTCTGTGGTAACCACGCTC GGTAAGCTCCGGTACACCACCAAGGTAAGGTGTGAGCTCGATGCGACCACCGAAAAAGCG ATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGAGGCCGCATCAAGTGCAACAATACG GCCGTGCCGCCGGAGATACACGACGCGATGATTCGCTGCGCCAAGGACCATCCACTGAAG AGTCTGATAGCCGATGGGCAACGATTGAACAATTGCCTTCGCTCGCGCAAATGGTATCCG CTCGATGGTACGGCCCCGAATCGGGGTGCGGAACGGGCGATCGAACGGACGCCGCCCAGT GC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      ---------------------------------------AGAATCGCCCCGAGGTTACAA 21
consensus_8860#1      TCGACTTTGGGGCGGGCGTCGGTACGGGCACGTGGGCGGTGGCCGACTTTTGGCGCGACC 60
                                                                                  

consensus_8860#2      -------------------------------GCAGAATCGCCACGAGGTTAATAACAACA 29
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      AAGCGCGCATTGACAGTTCGCGCTCGCCGAATGTAAACAAGCATGTGCGAATAAACAACA 81
consensus_8860#1      ACCTGTTCGAGATACTGTCGGTGGACAAATCGCGCCACGCGAACGATCTGGCCGACCTGG 120
                                                                                  

consensus_8860#2      AACAGTGC--ACGCGTTTCGCAGCGTACACCGACT-TGCACAATATCACAAGATGAGTGT 86
consensus_8860#3      ------TC--GC-CAAATAGAAGAAGAAGAAGGCT-TGCACAATATCACAAGATGAGTGT 50
consensus_8860#0      AACAGTGC--ACGCGTTTCGCAGCGTACACCGACT-TGCACAATATCACAAGATGAGTGT 138
consensus_8860#1      TGCTGCGCCAGGGCGATCCGAACCGGGCGAGCATGGTGCGGAACGTGTTCTATCGGCAGT 180
                             *     *     * *              ***  **  *        *   **

consensus_8860#2      TTTTCTAAGCAACTTCAGA------GTGCCACACTGCAGCAAAGGC-TTTCAGCTGTGC- 138
consensus_8860#3      TTTTCTAAGCAACTTCAGA------GTGCCACACTGCAGCAAAGGC-TTTCAGCTGTGC- 102
consensus_8860#0      TTTTCTAAGCAACTTCAGA------GTGCCACACTGCAGCAAAGGC-TTTCAGCTGTGC- 190
consensus_8860#1      TTCTTCCGGCGAGCCCGGATCGCAAGTACGACATCGTGCTGAGCGCGTTTTCGCTCTTCG 240
                      ** *    ** *   * **      ** * ***  *     *  ** ***  *** * * 

consensus_8860#2      -TCTGTGGTAACCACGCTCGGTAAGCA--CCGGTACACCACCA--AGGTTAGGTGTGAGC 193
consensus_8860#3      -TCTGTGGTAACCACGCTCGGTAAGCT--CCGGTACACCACCA--AGGTAAGGTGTGAGC 157
consensus_8860#0      -TCTGTGGTAACCACGCTCGGTAAGCA--CCGGTACACCACCA--AGGTTAGGTGTGAGC 245
consensus_8860#1      ATCAACCGTCCCGGCGGCGGCTGGACGAGCTGGTGGACCAGCTGTACGGCACGTTCGACA 300
                       **    **  *  **   * *   *   * ***  **** *   * *  * **  **  

consensus_8860#2      TCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGGG 253
consensus_8860#3      TCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGAG 217
consensus_8860#0      TCGATGCGACCACCGAAAAAGCGATTGCCGAGGGTGGCCTCAAGCCTCGCAAGCACCGGG 305
consensus_8860#1      AGTATCTGATC-CTGGTGGAGCAAGGCTCGAACGCGGGCTTCCAGCTGCTGGACGGCGTG 359
                         **  ** * * *    *** *    ***  * ** **     **      *  ** *

consensus_8860#2      TCCGCATCAAGTGCAACAATACGGCGGTGCCTGAG-GAAATA-CACGACGCGATGATCCG 311
consensus_8860#3      GCCGCATCAAGTGCAACAATACGGCCGTGCCGCCG-GAGATA-CACGACGCGATGATTCG 275
consensus_8860#0      TCCGCATCAAGTGCAACAATACGGCGGTGCCTGAG-GAAATA-CACGACGCGATGATCCG 363
consensus_8860#1      CGCA-ATCACATCCGGCGGAATCACGATGCGGACGAGAAGCATCTCTTCGCACCGTGTCC 418
                        *  ****  * *  *   *   *  ***    * **   * * *  ***   *   * 

consensus_8860#2      CTGCGCCAAGGACCATCCACTGAAGC---AGTCTGATAGCCCGATGGGCAAAC---GGAT 365
consensus_8860#3      CTGCGCCAAGGACCATCCACTGAAG----AGTCTGATAGCC-GATGGGCAAC-----GAT 325
consensus_8860#0      CTGCGCCAAGGACCATCCACTGAAA----AGCCTGATAGCC-GATGGGCAAC-----GGT 413
consensus_8860#1      CCACAGCATGGGCTGCCCGCGGATGATCAAGGACGATGGTACGCCGTGCAACTTTGAGGC 478
                      *  *  ** ** *   ** * **      **   *** *   *  * ****      *  

consensus_8860#2      TTGAGACAATTGCGTTTCGCTCGNCGCAAATGGTATCCGGTTCGAATGGGTACTGGCCCC 425
consensus_8860#3      T--GAACAATTGC-CTTCGCTCGC-GCAAATGGTATCCG-CTCGAT--GGTAC-GGCCCC 377
consensus_8860#0      T--GAGCAATTGC-GTTCGCTCGC-GCAAATGGTACCCG-CTCGAC--GGTAC-GGCCCC 465
consensus_8860#1      CACCTACACGCGCAACTTTCCCGCCCCGGGTGGACATCAGTACGGTAGCATTCTTTACTC 538
                            **   **   *  * **   *   ***    *    **      * *    * *

consensus_8860#2      GGAACCCGGGGTTCCGAAACCGGGGCGAATCGAAACGGACGNNCCCGGCCCAGTTGCCCG 485
consensus_8860#3      GAATC---GGGGTGCGGAAC--GGGCGA-TCGAA-CGGACGCC----GCCCAGT-GC--- 422
consensus_8860#0      GAACC---GGGGTGCGGAAC--GGGCGA-TCGAA-CGGACGCC----GCCCAGT-GCCCG 513
consensus_8860#1      GTACCT--GGTGTACAGGAG--GAACCCTCCGGACAGTGCGCACGGGTTTCCGCGACTCG 594
                      * * *   **  * *   *   *  *    ** *  *  **         * *   *   

consensus_8860#2      GGGGGCAGGGACGGCNG------------------------------------------- 502
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      GCGGCAGGACGCGTCCGTGTTTGACCTGCACGACGAGTACAGCTGCCTGACGCAGCTGTT 573
consensus_8860#1      TACGCCCG--ACGGCGG------------------------------------------- 609
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CGGCCGGTCCGATGCGGAGTACGCGGTGCTGCGGCGCATCTTCACCGAGATTGCCCAGCG 633
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CGATCCGGAGCTGCGGCCGCGCACTTCTCTCGACTTTGGGGCGGGCGTCGGTACGGGCAC 693
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      GTGGGCGGTGGCCGACTTTTGGCGCGACAAGTATCTGATCCTGGTGGAGCAAGGCTCGAA 753
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CGCGGGCTTCCAGCTGCTGGACGGTGTGCGCAACCACATCCGGCGGAATCACGATGCGGA 813
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CGAGAAGCATCTCTTCGCACCGTGTCCCCACAGCATGGGCTGCCCGCGGATGATCAAGGA 873
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CGACGGTACGCCGTGCAACTTTGAGGCCACCTACACGCGCAACTTTCCCGCCCCGGGTGG 933
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      ACATCAGTACGGTAGCATTCTTTACTCGTACCTGGTGTACAGGAGGAACCCTCCGGACAG 993
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      TGCGCACGGGTTTCCGCGACTCGTACGCCCGACGGCGGTGCGCTCCAAGCATTGCGTGTG 1053
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      TCACGTTTGCGCGGCGGACGGACAGCTGCGTGACGTTTCCTTTACCACGTCGAAACACGG 1113
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CCAGATTGTACATCGATGCGCCAAGGCTAGCCGGTGGGGCGATCTACTTCCAATGCGTAT 1173
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ------------------------------------------------------------
consensus_8860#3      ------------------------------------------------------------
consensus_8860#0      CCAGTGGTTAAATGGCGCGGAGGACGACGAGCACAGCGTGGAGACTTGAGGCGGACTAGT 1233
consensus_8860#1      ------------------------------------------------------------
                                                                                  

consensus_8860#2      ---------------------------------------------------
consensus_8860#3      ---------------------------------------------------
consensus_8860#0      TTGCTGATTTGAAATTGTGATTAGATGTGAATAGCAGAAAAATAAAAGTGT 1284
consensus_8860#1      ---------------------------------------------------
                                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)