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Anopheles gambiae
cluster # 8871 cluster # 8871       Sequences # 12       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8871#0 length = 1475 sequences # 3  
consensus_8871#1 length = 1205 sequences # 1  
consensus_8871#2 length = 1000 sequences # 2  
consensus_8871#3 length = 737 sequences # 1  
consensus_8871#4 length = 683 sequences # 3  
consensus_8871#5 length = 497 sequences # 1  
consensus_8871#6 length = 483 sequences # 1  

consensusID : consensus_8871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1475
fasta sequence
                              [CCGCCCACGCGTCCGGCTCTACCGTTCTTTACACTGTTTTCCGGGCCAATCCGGACTTTCTTCGATTTCGGTTTTACGTGCGTGCGTGCGTGCGTTACGTACGTAATTCCACATCGCGCTGGTGTGGAAAACAAAGATGAAATTTTGTCGTGCGCACAACTGGAAGCACGCCAGCAACTATTGTCCCAAGAACCAGACAAGTGTGCCGAAAGCAATAGTAATCATAGTGTCGTGTGTAGCAGCAACAGCAACGATCAGTTACTGTCAGTAGAACCAGCAGTGAAGACCGTTGTGCCAATCGCTGCTGCCGTCGCCCAGCGCGCTGGACTAGTGGAGGAAGTGAAGGCAGAAGAAACAATCGCAATCCCGCCGCGTTCAAATCTCGCGGAGCCAACCGTTGTTCCGTACGTTAAGCTCGTCGCCAACATCGGTGCTGATCAGAACAACGGCAACGACGAGCTCCTCGCTAGTGTTGGTGACAAGGTGTTGTTGTGCGTAAAGAACGATTCTCCGACGGTAGTGTCCGGCGAGCAACCGGTGCCGCTGCATAGTCGCGCCCTGCGCGAGCTGAACGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAGTCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACAGTTGCTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCAGGGCACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGATAAGGTTCCAGCGGGGGACTGTGGCGTTTGGCGCCATTTCGTTGCGTGCAAAAGTTGAACCCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGATTACATGCTTAGGGGTGTCGAGTAGCGGAAGTGGAAAGAAGAAAAAAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATTATTTTTTCGGTTAAGTGAAACGCAAATGCATCCAGGGAATTGTGTGCATATGCGCATGCGAAAGAAACTAAGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAATGGCAGCAGCGTGCACTTATGCGCGGCTTTCCCCTTTTCAGCGATGCATAGTGAGATGCGTTTCGGGCATCATCGGATAAGCGTTACCACCACGCT]

[+] EMBL BM630847             [CCGCCCACGCGTCCGGCTCTACCGTTCTTTACACTGTTTTCCGGGCCAATCCGGACTTTCTTCGATTTCGGTTTTACGTGCGTGCGTGCGTGCGTTACGTACGTAATTCCACATCGCGCTGGTGTGGAAAACAAAGATGAAATTTTGTCGTGCGCACAACTGGAAGCACGCCAGCAACTATTGTCCCAAGAACCAGACAAGTGTGCCGAAAGCAATAGTAATCATAGTGTCGTGTGTAGCAGCAACAGCAACGATCAGTTACTGTCAGTAGAACCAGCAGTGAAGACCGTTGTGCCAATCGCTGCTGCCGTCGCCCAGCGCGCTGGACTAGTGGAGGAAGTGAAGGCAGAAGAAACAATCGCAATCCCGCCGCGTTCAAATCTCGCGGAGCCAACCGTTGTTCCGTACGTTAAGCTCGTCGCCAACATCGGTGCTGATCAGAACAACGGCAACGACGAGCTCCTCGCTAGTGTTGGTGACAAGGTGTTGTTGTGCGTAAAGAACGATTCTCCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX608246             [                                                                                                                                                                                                                                                                                          AAGACCGGTGTGCCAATCGCTGCTGCCGTCGCCCAGCGCGCTGGACTAGTGGAGGAAGTGAAGGCAGAAGAAACAATCGCAATCCCGCCGCGTTCAAATCTCGCGGAGCCAACCGTTGTTCCGTACATTAAGCTCGTCGCCAACATCGGTGCTGATCAGAACAACGGCAACGACGAGCTCCTCGCTAGTGTTGGTGACAAGGTGTTGTTGTGCGTAAAGAACGATACTCCGACGGTAGTGTCCGGCGAGCAACCGGTGCCGCTGCATAGTCGCGCCCTGCGCGAGCTGAACGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAGTCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACAGTTGCTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCAGGGCACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGATAAGGTTCCAGCGGGGGACTGTGGCGTTTGGCGCCATTTCGTTGCGTGCAAAAGTTGAACCCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGATTACATGCTTAGGGGTGTCGAGTAG                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX611481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTTGCGTGCAAAAGTTGAACCCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGATTACATGCTTA GGGTGTCGAGTAGCGGAAGTGGAAAGAAGAAAAAAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATTATTTTTTCGGTTAAGTGAAACGCAAATGCATCCAGGGAATTGTGTGCATATGCGCATGCGAAAGAAACTAAGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAATGGCAGCAGCGTGCACTTATGCGCGGCTTTCCCCTTTTCAGCGATGCATAGTGAGATGCGTTTCGGGCATCATCGGATAAGCGTTACCACCACGCT]


>consensus_8871#0 CCGCCCACGCGTCCGGCTCTACCGTTCTTTACACTGTTTTCCGGGCCAATCCGGACTTTC TTCGATTTCGGTTTTACGTGCGTGCGTGCGTGCGTTACGTACGTAATTCCACATCGCGCT GGTGTGGAAAACAAAGATGAAATTTTGTCGTGCGCACAACTGGAAGCACGCCAGCAACTA TTGTCCCAAGAACCAGACAAGTGTGCCGAAAGCAATAGTAATCATAGTGTCGTGTGTAGC AGCAACAGCAACGATCAGTTACTGTCAGTAGAACCAGCAGTGAAGACCGTTGTGCCAATC GCTGCTGCCGTCGCCCAGCGCGCTGGACTAGTGGAGGAAGTGAAGGCAGAAGAAACAATC GCAATCCCGCCGCGTTCAAATCTCGCGGAGCCAACCGTTGTTCCGTACGTTAAGCTCGTC GCCAACATCGGTGCTGATCAGAACAACGGCAACGACGAGCTCCTCGCTAGTGTTGGTGAC AAGGTGTTGTTGTGCGTAAAGAACGATTCTCCGACGGTAGTGTCCGGCGAGCAACCGGTG CCGCTGCATAGTCGCGCCCTGCGCGAGCTGAACGCAGCTACTGCAGCAGCTAATGGCACC GTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGCCGG TGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAGTCGGG CAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACAGTTG CTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCAGGGC ACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGATAAG GTTCCAGCGGGGGACTGTGGCGTTTGGCGCCATTTCGTTGCGTGCAAAAGTTGAACCCCG CGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACACAGGACAATGGAAGCGGTGT AAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGATTACATGCTTAGGGG TGTCGAGTAGCGGAAGTGGAAAGAAGAAAAAAAAACCCAATTACTGTGATAGTTGATATA ATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACGTATTG TTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATTATTTTTTCGGTTAA GTGAAACGCAAATGCATCCAGGGAATTGTGTGCATATGCGCATGCGAAAGAAACTAAGAG AGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAAT GGCAGCAGCGTGCACTTATGCGCGGCTTTCCCCTTTTCAGCGATGCATAGTGAGATGCGT TTCGGGCATCATCGGATAAGCGTTACCACCACGCT



consensusID : consensus_8871#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1205
fasta sequence
                              [GCAAGAATTCCCGAGGTTATTAATGCGTAAACGAGAGGAATTAGTAGTGACGACTNAAACTCTAGATTACATGCTTAGGGTGTAGAGTAGCTGGAAGTGGAAAGCAAGAAAAAAAAACCAATTACTGTGATAGTTGATATAATTTATAGTATTAAAGATAACTAGAACTAGAATCTAGACGACCGGATTAACGGGCTGACGTACTATGTCTGGCGCAGCGAATGACACAGGGCGGTNTCNTGTCGTGCNNACAAACTCGTCNATNATCATTCATCCATCGNTTTTNACGTTGAACACGCCACATGNCATTCCACGGGACAACTACGGGTGGTTGACACTTGGTTGCCGCCACACTAGCGAAACAAGGCANCACACGGAACAAGCAGCAGAAAGCACGAAAGAAGCAAGAAGACCGGCACACACTAAAACACAACCACAAAACGAGGGGACTAGCGACAAGCCAGGGACAANANATACACGGACATCCACAGGGCGCACACTNGGGCCNGCCACACCGANNGACACACACGTACTATTGGCCCNGCCGGCNGGCCCATTCACTACGCACCCCCATAATAATAGTACANCACAGGNACCCNGNGCCACGTACTNCCATGGCAAGGCAATTNGACAGANTATCACGCCGGGCGGCCACCTTCNACTTACCGCGANACCAACATAGCCGGCATATANAGCCCCAAGCCCGTATTGCCACATTGGCCCTTATNCCCACAGCATNGTACTACCCACGCGCNCGCATGNCTCTGCTNACCNCNCAAAAAACTANAGGCACCAATCNACCATGGGCGCCAGTGGTCGACCAANACANCNTCGGGNAGNCGCGGCCCNCACANCACANCGACCCACTNGGCGNANACNTACCCTATGTATATCCNCTAACAGCCGNGNCAGCCCNATNGNCTACCNCCCAGCGCNCAGNGTGGCAGACACCCCCCGGACATTNCACATCGNGCTCACCACNCAAGCTGGACTAGGCCCGTCTATACGCCAGCAGCGCANAAAACATGTGGGATAANGNTGACAAACNAACGCGCGCAACCNCCAACAGTACAAAAACCCCGTTATGGNCCGCAGTTAATTGNGTCCACCAGGACCCAAANNTACATTAGACCGTACAACACGAGCCCACCCCCAACAAGNGCTGGTAAAAGCCAGGGGTAATCCACACNATCGGCATCCAAAGA]

[+] EMBL AL692552             [GCAAGAATTCCCGAGGTTATTAATGCGTAAACGAGAGGAATTAGTAGTGACGACTNAAACTCTAGATTACATGCTTAGGGTGTAGAGTAGCTGGAAGTGGAAAGCAAGAAAAAAAAACCAATTACTGTGATAGTTGATATAATTTATAGTATTAAAGATAACTAGAACTAGAATCTAGACGACCGGATTAACGGGCTGACGTACTATGTCTGGCGCAGCGAATGACACAGGGCGGTNTCNTGTCGTGCNNACAAACTCGTCNATNATCATTCATCCATCGNTTTTNACGTTGAACACGCCACATGNCATTCCACGGGACAACTACGGGTGGTTGACACTTGGTTGCCGCCACACTAGCGAAACAAGGCANCACACGGAACAAGCAGCAGAAAGCACGAAAGAAGCAAGAAGACCGGCACACACTAAAACACAACCACAAAACGAGGGGACTAGCGACAAGCCAGGGACAANANATACACGGACATCCACAGGGCGCACACTNGGGCCNGCCACACCGANNGACACACACGTACTATTGGCCCNGCCGGCNGGCCCATTCACTACGCACCCCCATAATAATAGTACANCACAGGNACCCNGNGCCACGTACTNCCATGGCAAGGCAATTNGACAGANTATCACGCCGGGCGGCCACCTTCNACTTACCGCGANACCAACATAGCCGGCATATANAGCCCCAAGCCCGTATTGCCACATTGGCCCTTATNCCCACAGCATNGTACTACCCACGCGCNCGCATGNCTCTGCTNACCNCNCAAAAAACTANAGGCACCAATCNACCATGGGCGCCAGTGGTCGACCAANACANCNTCGGGNAGNCGCGGCCCNCACANCACANCGACCCACTNGGCGNANACNTACCCTATGTATATCCNCTAACAGCCGNGNCAGCCCNATNGNCTACCNCCCAGCGCNCAGNGTGGCAGACACCCCCCGGACATTNCACATCGNGCTCACCACNCAAGCTGGACTAGGCCCGTCTATACGCCAGCAGCGCANAAAACATGTGGGATAANGNTGACAAACNAACGCGCGCAACCNCCAACAGTACAAAAACCCCGTTATGGNCCGCAGTTAATTGNGTCCACCAGGACCCAAANNTACATTAGACCGTACAACACGAGCCCACCCCCAACAAGNGCTGGTAAAAGCCAGGGGTAATCCACACNATCGGCATCCAAAGA]


>consensus_8871#1 GCAAGAATTCCCGAGGTTATTAATGCGTAAACGAGAGGAATTAGTAGTGACGACTNAAAC TCTAGATTACATGCTTAGGGTGTAGAGTAGCTGGAAGTGGAAAGCAAGAAAAAAAAACCA ATTACTGTGATAGTTGATATAATTTATAGTATTAAAGATAACTAGAACTAGAATCTAGAC GACCGGATTAACGGGCTGACGTACTATGTCTGGCGCAGCGAATGACACAGGGCGGTNTCN TGTCGTGCNNACAAACTCGTCNATNATCATTCATCCATCGNTTTTNACGTTGAACACGCC ACATGNCATTCCACGGGACAACTACGGGTGGTTGACACTTGGTTGCCGCCACACTAGCGA AACAAGGCANCACACGGAACAAGCAGCAGAAAGCACGAAAGAAGCAAGAAGACCGGCACA CACTAAAACACAACCACAAAACGAGGGGACTAGCGACAAGCCAGGGACAANANATACACG GACATCCACAGGGCGCACACTNGGGCCNGCCACACCGANNGACACACACGTACTATTGGC CCNGCCGGCNGGCCCATTCACTACGCACCCCCATAATAATAGTACANCACAGGNACCCNG NGCCACGTACTNCCATGGCAAGGCAATTNGACAGANTATCACGCCGGGCGGCCACCTTCN ACTTACCGCGANACCAACATAGCCGGCATATANAGCCCCAAGCCCGTATTGCCACATTGG CCCTTATNCCCACAGCATNGTACTACCCACGCGCNCGCATGNCTCTGCTNACCNCNCAAA AAACTANAGGCACCAATCNACCATGGGCGCCAGTGGTCGACCAANACANCNTCGGGNAGN CGCGGCCCNCACANCACANCGACCCACTNGGCGNANACNTACCCTATGTATATCCNCTAA CAGCCGNGNCAGCCCNATNGNCTACCNCCCAGCGCNCAGNGTGGCAGACACCCCCCGGAC ATTNCACATCGNGCTCACCACNCAAGCTGGACTAGGCCCGTCTATACGCCAGCAGCGCAN AAAACATGTGGGATAANGNTGACAAACNAACGCGCGCAACCNCCAACAGTACAAAAACCC CGTTATGGNCCGCAGTTAATTGNGTCCACCAGGACCCAAANNTACATTAGACCGTACAAC ACGAGCCCACCCCCAACAAGNGCTGGTAAAAGCCAGGGGTAATCCACACNATCGGCATCC AAAGA



consensusID : consensus_8871#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1000
fasta sequence
                              [CCGCCCACGCGTCCGCACAGTACAACACTCCCTGCCGGTGGACAAAGAGCACAGTCTGCTGCTCAGCGCGGTAGTCGACACGATTGCTGCGAATGATGCCGGCAGCGTGGCCGGCAGCAGCTCCGGTTCGAGCGACCTGCCCGCCACAAACAATAGCAATAATGACAGCAAATCGACTGCACCATCGGCAGCATCGTCCGCTGCGTCGATCGACTCTAGCCTGGCGGCACTGCTGTGCGGGGGTAATGTCATCAGCATACAGTCGGACACGTCCAACCTATCGCAACAGCAATCGATCGGCAATCAGCTACTGATATCGCACACCAATGCCGGAAACCAGCAGGAACAGCGCCACAACAACCAGCCGCAGCCACAGCAATCGCCCCTCCAGCAGCAGCAGCAGCAGCAGCAAGCGATCGTGCCGCAGACAAACATTATCGCATCGTTCGTCACGACCGCCGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTAACAATAAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGATCCGCACAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAATCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATAAAACCATTCCACTGACACCACCGGAAATACTGATCGAGAACACGGGCATGGTAGAGCTTTCGTCCGATGGCAACACCACCCGTCCTGACATGCTGTTCAATCTTGGCGATGAGGACGATAATGGCGTGCTGTTCAGCTCGACCAACCCACTGATCGGTGGACAAGCACCACTGAACGATGCACTCGCACGTCCACTCACAATTCAG]

[+] EMBL BM631567             [CCGCCCACGCGTCCGCACAGTACAACACTCCCTGCCGGTGGACAAAGAGCACAGTCTGCTGCTCAGCGCGGTAGTCGACACGATTGCTGCGAATGATGCCGGCAGCGTGGCCGGCAGCAGCTCCGGTTCGAGCGACCTGCCCGCCACAAACAATAGCAATAATGACAGCAAATCGACTGCACCATCGGCAGCATCGTCCGCTGCGTCGATCGACTCTAGCCTGGCGGCACTGCTGTGCGGGGGTAATGTCATCAGCATACAGTCGGACACGTCCAACCTATCGCAACAGCAATCGATCGGCAATCAGCTACTGATATCGCACACCAATGCCGGAAACCAGCAGGAACAGCGCCACAACAACCAGCCGCAGCCACAGCAATCGCCCCTCCAGCAGCAGCAGCAGCAGCAGCAAGCGATCGTGCCGCAGACAAACATTATCGCATCGTTCGTCACGACCGCCGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTAACAATAAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCT                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX626950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGATCCGCACAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAATCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATAAAACCATTCCACTGACACCACCGGAAATACTGATCGAGAACACGGGCATGGTAGAGCTTTCGTCCGATGGCAACACCACCCGTCCTGACATGCTGTTCAATCTTGGCGATGAGGACGATAATGGCGTGCTGTTCAGCTCGACCAACCCACTGATCGGTGGACAAGCACCACTGAACGATGCACTCGCACGTCCACTCACAATTCAG]


>consensus_8871#2 CCGCCCACGCGTCCGCACAGTACAACACTCCCTGCCGGTGGACAAAGAGCACAGTCTGCT GCTCAGCGCGGTAGTCGACACGATTGCTGCGAATGATGCCGGCAGCGTGGCCGGCAGCAG CTCCGGTTCGAGCGACCTGCCCGCCACAAACAATAGCAATAATGACAGCAAATCGACTGC ACCATCGGCAGCATCGTCCGCTGCGTCGATCGACTCTAGCCTGGCGGCACTGCTGTGCGG GGGTAATGTCATCAGCATACAGTCGGACACGTCCAACCTATCGCAACAGCAATCGATCGG CAATCAGCTACTGATATCGCACACCAATGCCGGAAACCAGCAGGAACAGCGCCACAACAA CCAGCCGCAGCCACAGCAATCGCCCCTCCAGCAGCAGCAGCAGCAGCAGCAAGCGATCGT GCCGCAGACAAACATTATCGCATCGTTCGTCACGACCGCCGTCAAAAAGCCCTCCCCGAC CGGTGTCAACGGTAACAATAAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACAC GGCCGCCGGCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTC GGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTC CAAGTCGCGATCCGCACAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGG CGGCAACGCGGGGCTGCTGCAGGAACAATCGGGCAACTCGGTCCTGATGAATCTGCTCGT CAGTGGGTGCGATAAAACCATTCCACTGACACCACCGGAAATACTGATCGAGAACACGGG CATGGTAGAGCTTTCGTCCGATGGCAACACCACCCGTCCTGACATGCTGTTCAATCTTGG CGATGAGGACGATAATGGCGTGCTGTTCAGCTCGACCAACCCACTGATCGGTGGACAAGC ACCACTGAACGATGCACTCGCACGTCCACTCACAATTCAG



consensusID : consensus_8871#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 737
fasta sequence
                              [GCCAAGAATCGCGCACGAGGAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGCCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAGTCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACAGTTGCTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCAGGGCACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGATAAGGTTCCAGCGGGGGACTGTGGCGTTTGGCGCCATTTCGTTGCGTGCAAAAGTTGAACCCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGGATTACATGCTTAGGGTGTCGAGTAGCGGAAGGTGGAAAAGGAAGANCAGNNNNNANACCCAAGTTAACTGGTGATAAGTTGATATACAATGTCTGATAGGTTCGANAGATACTGAANCT]

[+] EMBL BX467678             [GCCAAGAATCGCGCACGAGGAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGCCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGCGGGGCTGCTGCAGGAACAGTCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACAGTTGCTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCAGGGCACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGATAAGGTTCCAGCGGGGGACTGTGGCGTTTGGCGCCATTTCGTTGCGTGCAAAAGTTGAACCCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGGATTACATGCTTAGGGTGTCGAGTAGCGGAAGGTGGAAAAGGAAGANCAGNNNNNANACCCAAGTTAACTGGTGATAAGTTGATATACAATGTCTGATAGGTTCGANAGATACTGAANCT]


>consensus_8871#3 GCCAAGAATCGCGCACGAGGAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACAC GGCCGCCGGCAACAATTGCAAGCGCCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTC GGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTC CAAGTCGCGGTCCGCGCAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGG CGGCAACGCGGGGCTGCTGCAGGAACAGTCGGGCAACTCGGTCCTGATGAATCTGCTCGT CAGTGGGTGCGATGTAAGTGCGGGCTACAGTTGCTTTCCCCGTCCCAGCAAAGCGGCCAA AGCATAGTAAAGAGCAGAGCGGTGCAGCAGGGCACTTGCGGGAAGGACAGTAGACAGGAG GCAGGCGAAAATGTCTAGCAAGCGTCGGATAAGGTTCCAGCGGGGGACTGTGGCGTTTGG CGCCATTTCGTTGCGTGCAAAAGTTGAACCCCGCGGAAGTGTATAGGGTAGTAGTCGGCA TAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAG GACGACTAAAACTCTAGGATTACATGCTTAGGGTGTCGAGTAGCGGAAGGTGGAAAAGGA AGANCAGNNNNNANACCCAAGTTAACTGGTGATAAGTTGATATACAATGTCTGATAGGTT CGANAGATACTGAANCT



consensusID : consensus_8871#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 683
fasta sequence
                              [CCCCGAGGTNAGTGAACCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAG-CTTGTAGACACAGGACAATGGAAGCGGTGTAAAATGCCGGTTAAAAAACCCGAGAAAAGAAATTAAGGAGGACGACTAAAACTCTTAGATTACATGCTTAGGGTGTCGAGTA-CGGAAGTGG-AAGAAGAAAAAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATTATTTTTTTTCGGTTAAGTGAAACGCAAATGCATCCA-GGGAATTGTGTGCATGTGCGCATGCG-AAAGAAACGAAGAGAGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAATGGCAGCAGCGTGCACTTATGCGCGGCTTTCCCCTTTTCAGCGATGCATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTTACCACCATGCTGCTTCACTTTCCGTTTGTGTACGAATTGTCTTTTGCTTGATGTTTTGGGGTTTCGCTTGTATCTTTCTAGCGCACAGTCCCAGCTGCGCACGTGGGGGAAAAGATGTGCGTTGCACCAAATGGTAGGAAAGC]

[+] EMBL AL933263             [CCCCGAGGTNAGTGAACCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAG CTTGTAGACACAGGACAATGGAAGCGGTGTAAAATGCCGGTTAAAAAACCCGAGAAAAGAAATTAAGGAGGACGACTAAAACTCTTAGATTACATGCTTAGGGTGTCGAGTA CGGAAGTGG AAGAAGAAAAAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATTA  TTTTTTCGGTTAAGTGAAACGCAAATGCATCCACCGGAATTGTGTGCATATGCGCATGCG AAAGAAACGA    AGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAATGGCAGCAGCGTGCAC                                                                                                                                                                                                                    ]
[+] EMBL BM629857             [                             ccgGGGTAGTAGTCGGCATAGCCTTGTAGACACAGGACAATGGAAGCGGTGT AAATGC  GT    AAA  CGAG   AGGAATT AGGAGGACGACTAAAACTC TAGATTACATGCTTAGGGTGTCGAGTAGCGGAAGTGGAAAGAAGAAAAAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATTATTTTTTTTCGGTTAAGTGAAACGCAAATGCATCCA GGGAATTGTGTGCATGTGCGCATGCGAAAAGAAACGAAGAGAGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAATGGCAGCAGCGTGCACTTATGCGCGGCTTTCCCCTTTTCAGCGATGCATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTTACCACCATGCTGCTTCACTTTCCGTTTGTGTACGAATTGTCTTTTGCTTGATGTTTTGGGGTTTCGCTTGTATCTTTCTAGCGCACAGTCCCAGCTGCGCACGTGGGGGAAAAGATGTGCGTTGCACCAAATGGTAGGAAAGC]
[+] EMBL BX612993             [                                                                                                                                                                                                                                                                            TATTGTTGGGCAGGAATGACAAGGGGGTTTTGTCGTGAAAAACTCGTCATTATTTTTTTTCGGTTAAGTGAAACGCAAAGGCATCCA GGGAATTGTGTGCATGTGCGCATGCG AAAGAAACGAAGAGAGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGGAATGGCAGCAGCGTGCACATATGCGCGGCTTTCCCCTTTTCAGCGATGCATAGTGAGAAGCGTTTCGGGCATCATCGGACAAG                                                                                                                                                   ]


>consensus_8871#4 CCCCGAGGTNAGTGAACCCGCGGAAGTGTATAGGGTAGTAGTCGGCATAGCTTGTAGACA CAGGACAATGGAAGCGGTGTAAAATGCCGGTTAAAAAACCCGAGAAAAGAAATTAAGGAG GACGACTAAAACTCTTAGATTACATGCTTAGGGTGTCGAGTACGGAAGTGGAAGAAGAAA AAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGATAACTGAACTGAAT CTAGCGACCGGATTAAGGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCG TGAAAAACTCGTCATTATTTTTTTTCGGTTAAGTGAAACGCAAATGCATCCAGGGAATTG TGTGCATGTGCGCATGCGAAAGAAACGAAGAGAGAGAGAGAGAGAGCGGAAATAAAACAA AAAGAGGGTAGAAGAGGAAAATCCGCTCAAGGCAATGGCAGCAGCGTGCACTTATGCGCG GCTTTCCCCTTTTCAGCGATGCATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTT ACCACCATGCTGCTTCACTTTCCGTTTGTGTACGAATTGTCTTTTGCTTGATGTTTTGGG GTTTCGCTTGTATCTTTCTAGCGCACAGTCCCAGCTGCGCACGTGGGGGAAAAGATGTGC GTTGCACCAAATGGTAGGAAAGC



consensusID : consensus_8871#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence
                              [CCGCGCTGAACGGTTCACAGCAACGGCAGCAGGAGGCAGGTCCGAAGCGCATCAAGCTTTCGGAACACAACCTCCTGCCCCACTCCATGGTTGTGCTGCCGGCGAACGTAAAGCTATGCGATACTTGGAAGTTCGACGATCTGCTACAGCTAAACGGCGGCAGTATCAGTATCAATACAAAACCGGGCACACAGCAGCAGCAGCAGCAGCAGCAGCAAGCGATCGTGCCGCAGACAAACATTATCGCATCGTTCGTCACGACCGCCGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTAACAATAAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGATCCGCACAGGACGGTGGGGCC]

[+] EMBL BM649968             [CCGCGCTGAACGGTTCACAGCAACGGCAGCAGGAGGCAGGTCCGAAGCGCATCAAGCTTTCGGAACACAACCTCCTGCCCCACTCCATGGTTGTGCTGCCGGCGAACGTAAAGCTATGCGATACTTGGAAGTTCGACGATCTGCTACAGCTAAACGGCGGCAGTATCAGTATCAATACAAAACCGGGCACACAGCAGCAGCAGCAGCAGCAGCAGCAAGCGATCGTGCCGCAGACAAACATTATCGCATCGTTCGTCACGACCGCCGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTAACAATAAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGATCCGCACAGGACGGTGGGGCC]


>consensus_8871#5 CCGCGCTGAACGGTTCACAGCAACGGCAGCAGGAGGCAGGTCCGAAGCGCATCAAGCTTT CGGAACACAACCTCCTGCCCCACTCCATGGTTGTGCTGCCGGCGAACGTAAAGCTATGCG ATACTTGGAAGTTCGACGATCTGCTACAGCTAAACGGCGGCAGTATCAGTATCAATACAA AACCGGGCACACAGCAGCAGCAGCAGCAGCAGCAGCAAGCGATCGTGCCGCAGACAAACA TTATCGCATCGTTCGTCACGACCGCCGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTA ACAATAAGCGCACCCTTGCCGGTGTTAGCGAATCTGCCGACGACACGGCCGCCGGCAACA ATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGCAGCTAC TGCAGCAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGATCCG CACAGGACGGTGGGGCC



consensusID : consensus_8871#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence
                              [TAATACTAATAGAATTTGTACAGATACTCCTACAGGATAGAGGACGGTGGAAGGAGTGGTCGGGTGTGATCGGGCGTGCGATCGCGTGGAGTAGAAAGTGGAGAAAAGAATGGTTGAAACACATTAACATTAAGAGCAGATTTAAAGAGGAGAAGGAGCTTAATGCTTAATAGCAGCATAAGGACGCAAGATGTGCCAATCGTATTTGCCTAACTACAGAGCTACGTATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTTACCACCATGCTGCTTCACTTTCCGTTTGTGTACGAATTGTCTTTTGCTTGTGTTTTGGGGTTTCGCTTGTATCTTTCTAGCGCACAGTCCCAGCTGCGCACGTGGGGAGAGATGTGCGTTGCACCAAATGGTAGGAAAGCAACAGCAAACCTTGCATATGCAGCATATGCAAACGCGCAAAGTGTTTTGTTTTTGTTAGTTGTTAAATAAACACTTGT]

[+] EMBL BX617846             [TAATACTAATAGAATTTGTACAGATACTCCTACAGGATAGAGGACGGTGGAAGGAGTGGTCGGGTGTGATCGGGCGTGCGATCGCGTGGAGTAGAAAGTGGAGAAAAGAATGGTTGAAACACATTAACATTAAGAGCAGATTTAAAGAGGAGAAGGAGCTTAATGCTTAATAGCAGCATAAGGACGCAAGATGTGCCAATCGTATTTGCCTAACTACAGAGCTACGTATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTTACCACCATGCTGCTTCACTTTCCGTTTGTGTACGAATTGTCTTTTGCTTGTGTTTTGGGGTTTCGCTTGTATCTTTCTAGCGCACAGTCCCAGCTGCGCACGTGGGGAGAGATGTGCGTTGCACCAAATGGTAGGAAAGCAACAGCAAACCTTGCATATGCAGCATATGCAAACGCGCAAAGTGTTTTGTTTTTGTTAGTTGTTAAATAAACACTTGT]


>consensus_8871#6 TAATACTAATAGAATTTGTACAGATACTCCTACAGGATAGAGGACGGTGGAAGGAGTGGT CGGGTGTGATCGGGCGTGCGATCGCGTGGAGTAGAAAGTGGAGAAAAGAATGGTTGAAAC ACATTAACATTAAGAGCAGATTTAAAGAGGAGAAGGAGCTTAATGCTTAATAGCAGCATA AGGACGCAAGATGTGCCAATCGTATTTGCCTAACTACAGAGCTACGTATAGTGAGATGCG TTTCGGGCATCATCGGACAAGCGTTACCACCATGCTGCTTCACTTTCCGTTTGTGTACGA ATTGTCTTTTGCTTGTGTTTTGGGGTTTCGCTTGTATCTTTCTAGCGCACAGTCCCAGCT GCGCACGTGGGGAGAGATGTGCGTTGCACCAAATGGTAGGAAAGCAACAGCAAACCTTGC ATATGCAGCATATGCAAACGCGCAAAGTGTTTTGTTTTTGTTAGTTGTTAAATAAACACT TGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8871#0      CCGCCCACGCGTCCGGCTCTACCGTTCTTTACACTGTTTTCCGGGCCAATCCGGACTTTC 60
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      ------------------------------------------------------------
                                                                                  

consensus_8871#0      TTCGATTTCGGTTTTACGTGCGTGCGTGCGTGCGTTACGTACGTAATTCCACATCGCGCT 120
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      ------------------------------------------------------------
                                                                                  

consensus_8871#0      GGTGTGGAAAACAAAGATGAAATTTTGTCGTGCGCACAACTGGAAGCACGCCAGCAACTA 180
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      ------------------------------------------------------------
                                                                                  

consensus_8871#0      TTGTCCCAAGAACCAGACAAGTGTGCCGAAAGCAATAGTAATCATAGTGTCGTGTGTAGC 240
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      ------------------------------------------------------------
                                                                                  

consensus_8871#0      AGCAACAGCAACGATCAGTTACTGTCAGTAGAACCAGCAGTGAAGACCGTTGTGCCAATC 300
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      ------------------------------------GCAAGAATTCCCGAGGTTATTAAT 24
                                                                                  

consensus_8871#0      GCTGCTGCCGTCGCCCAGCGCGCTGGACTAGTGGAGGAAGTGAAGGCAGAAGAAACAATC 360
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      GCGTAAACGAGAGGAATTAGTAGTGACGACTNAAACTCTAGATTACATGCTTAGGGTGTA 84
                                                                                  

consensus_8871#0      GCAATCCCGCCGCGTTCAAATCTCGCGGAGCCAACCGTTGTTCCGTACGTTAAGCTCGTC 420
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      ------------------------------------------------------------
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      GAGTAGCTGGAAGTGGAAAGCAAGAAAAAAAAACCAATTACTGTGATAGTTGATATAATT 144
                                                                                  

consensus_8871#0      GCCAACATCGGTGCTGATCAGAACAACGGCAACGACGAGCTCCTCGCTAGTGTTGGTGAC 480
consensus_8871#3      ---------------GCCAAGAATCGCG--CACGAGGAGCGCACCCTTGCCGGTGTTAGC 43
consensus_8871#4      --------------CCCCGAGGTNAGTGAACCCGCGGAAGTGTATAGGGTAGTAGTCGGC 46
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      --------------------------------CCGCCCACGCGTCCGCACAGTACAACAC 28
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      TATAGTATTAAAGATAACTAGAACTAGAATCTAGACGACCGGATTAACGGGCTGACGTAC 204
                                                                                  

consensus_8871#0      AAGGTGTTGTTGTGCGTAAAGAACGATTCTCCG-ACGGTAGTGTCCGGCGAG-CAACCGG 538
consensus_8871#3      GAA-------TCTGCCGACGACACGGC-CGCCG-GCAACAATTGCAAGCGCCTCAAATCG 94
consensus_8871#4      ATAGCTTGTAGACACAGGACAATGGAAGCGGTGTAAAATGCCGGTTAAAAAACCCGAGAA 106
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      TCCCTGCCGGTGGACAAAGAGCACAGTCTGCTGCTCAGCGCGGTAGTCGACACGATTGCT 88
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      TATGTCTGGCGCAGCGAATGACACAGGGCGGTNTCNTGTCGTGCNNACAAACTCGTCNAT 264
                                                                                  

consensus_8871#0      TGCCGCTGCATAGTCGCGCCCTGCGCGAGCTGAAC-GCAGCTACTGCAGCAGCTAATGGC 597
consensus_8871#3      TCCAGCGGCGCCG----GTCCAGCGCCGTCGGCACCGCAGCTACTGCAGCAGCTAATGGC 150
consensus_8871#4      AAGAAATTAAGGAGGACGACTAAAACTCTTAGATTACATGCTTAGGGTGTCGAGTACGGA 166
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      GCGAATGATGCCGGCAGCGTGGCCGGCAGCAGCTCCGGTTCGAGCGACCTGCCCGCCACA 148
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      NATCATTCATCCATCGNTTTTNACGTT----GAACACGCCACATGNCATTCCACGGGACA 320
                                                                                  

consensus_8871#0      ACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGC 657
consensus_8871#3      ACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGTCGCGGTCCGCGCAGGACGGTGGGGC 210
consensus_8871#4      AGTGGAAGAAGAAAAAAAACCCAATTACTGTGATAGTTGATATAATTTATAGTTTAAAGA 226
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      AACAATAGCAATAATGACAGCAAATCGACTGCACCATCGGCAGCATC--GTCCGCTGCGT 206
consensus_8871#5      --------------CCGCGCTGAACGGTTCACAGCAACGGCAGCA----GGAGGCAGGTC 42
consensus_8871#1      ACTACGGGTGGTTGACACTTGGTTGCCGCCACACTAGCGAAACAAGGCANCACACGGAAC 380
                                                                                  

consensus_8871#0      CGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGC-GGGGCTGCTGCAGGAACAGT 716
consensus_8871#3      CGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGCAACGC-GGGGCTGCTGCAGGAACAGT 269
consensus_8871#4      TAACTGAACTGAATCTAGCGACCGGATTAAGGGCGGACG-TATTGTTGGGCAGGAATGAC 285
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      CGATCGACTCTAGCCTGGCGG--CACTGCTGTGCGGGGG-TAATGTCATCAGCATACAGT 263
consensus_8871#5      CGAAGCGCATCAAGCTTTCGG--AACACAACCTCCTGCC-CCACTCCATGGTTGTGCTGC 99
consensus_8871#1      AAGCAGCAGAAAGCACGAAAGAAGCAAGAAGACCGGCACACACTAAAACACAACCACAAA 440
                                                                                  

consensus_8871#0      CGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACA 776
consensus_8871#3      CGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGTGGGTGCGATGTAAGTGCGGGCTACA 329
consensus_8871#4      AAGGCGGTTTTGTCGTGA-AAA---ACTCGTCA--TTATTTTTTTTCGGTTAAGTGAAAC 339
consensus_8871#6      ---------TAATACTAATAGA---ATTTGTAC--AGATACTCCTACAGGATAGAGGACG 46
consensus_8871#2      CGGACACGTCCAACCTATCGCAACAGC-AATCGATCGGCAATCAGCTACTGATATCGCAC 322
consensus_8871#5      CGGCGAACGTAAAGCTAT-GCGATACTTGGAAGTTCGACGATCTGCTACAGCTA------ 152
consensus_8871#1      ACGAGGGGACTAGCGACAAGCCAGGGACAANANATACACGGACATCCACAGGGCGCACAC 500
                                                                                  

consensus_8871#0      GTTGCTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCA 836
consensus_8871#3      GTTGCTTTCCCCGTCCCAGCAAAGCGGCCAAAGCATAGTAAAGAGCAGAGCGGTGCAGCA 389
consensus_8871#4      GCAAATGCA----TCCAGGG-AATTGTGTGCATGTGCGCATGCGAAAGAA-ACGAAGAGA 393
consensus_8871#6      GTGGAAGGAGTGGTCGGGTGTGATCGGGCGTGCGATCGCGTGGAGTAGAA-AGTGGAGAA 105
consensus_8871#2      ACCAATGCCGGAAACCAGCAGGAACA---GCGCCACAACAACCAGCCGCA-GCCACAGCA 378
consensus_8871#5      ---AACGGCGG-------CAGTATCA---GTATCAATACAA--AACCGGG-CACACAGCA 196
consensus_8871#1      TNGGGCCNGCCACACCGANNGACACACACGTACTATTGGCCCNGCCGGCNGGCCCATTCA 560
                                                                     *           *

consensus_8871#0      GGGCACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGA 896
consensus_8871#3      GGGCACTTGCGGGAAGGACAGTAGACAGGAGGCAGGCGAAAATGTCTAGCAAGCGTCGGA 449
consensus_8871#4      GAGAGAGAGAGAGCGGAAATAAAACAAAAAG-AGGGTAGAAGAGGAAAATCCGCTCAAGG 452
consensus_8871#6      AAGAATGGTTGAAACACATTAACATTAAGAGCAGATTTAAAGAGGAGAAGGAGCTTAATG 165
consensus_8871#2      ATCGCCCCTCCAGCAGCAGCAGCAGCAGCAG-CAAGCGATCGTGCCGCAGACAAACATTA 437
consensus_8871#5      ------------GCAGCAGCAGCAGCAGCAG-CAAGCGATCGTGCCGCAGACAAACATTA 243
consensus_8871#1      CTACGCACCCCCATAATAATAGTA-CANCAC-AGGNACCCNGNGCCACGTACTNCCATGG 618
                                       *        *  *             *                

consensus_8871#0      TAAGGTTCCAGCGGGGGACTGTGGCGTTTGGCG--CCATTTCGTTGCGTGCAAAAGTTGA 954
consensus_8871#3      TAAGGTTCCAGCGGGGGACTGTGGCGTTTGGCG--CCATTTCGTTGCGTGCAAAAGTTGA 507
consensus_8871#4      C--AATGGCAGCA---GCGTGCACT-TATGCG---CGGCTTTCCC---CTTTTCAGCGAT 500
consensus_8871#6      CTTAATAGCAGCATAAGGACGCAAGATGTGCCAATCGTATTTGCCTAACTACAGAGCTAC 225
consensus_8871#2      TCGCATCGTTCGTCACGACCGC--CGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTA- 494
consensus_8871#5      TCGCATCGTTCGTCACGACCGC--CGTCAAAAAGCCCTCCCCGACCGGTGTCAACGGTA- 300
consensus_8871#1      CAAGGCAATTNGACA-GANTATCACGCCGGGCGGCCACCTTCNACTTACCGCGANACCA- 676
                                      *                  *                        

consensus_8871#0      ACCCCGCGGAA-GTGTATAGGGTAGTAGTCGGCATAGCTTGTAG--ACACAGGACAATGG 1011
consensus_8871#3      ACCCCGCGGAA-GTGTATAGGGTAGTAGTCGGCATAGCTTGTAG--ACACAGGACAATGG 564
consensus_8871#4      GCATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTTACCA--CCATGCTGCTTCAC 558
consensus_8871#6      GTATAGTGAGATGCGTTTCGGGCATCATCGGACAAGCGTTACCA--CCATGCTGCTTCAC 283
consensus_8871#2      --ACAATAAGC-GCACCCTTGCCGGTGTTAG-CGAATCTGCCGA--CGACACGGCCGCCG 548
consensus_8871#5      --ACAATAAGC-GCACCCTTGCCGGTGTTAG-CGAATCTGCCGA--CGACACGGCCGCCG 354
consensus_8871#1      ACATAGCCGGC-ATATANAGCCCCAAGCCCGTATTGCCACATTGGCCCTTATNCCCACAG 735
                                                    *                       *     

consensus_8871#0      AAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAG--ATTAC 1069
consensus_8871#3      AAGCGGTGTAAATGCGTAAACGAGAAGAATTAGGAGGACGACTAAAACTCTAGG-ATTAC 623
consensus_8871#4      TTTCCGTTTGTGTACG-----AATTGTCTTTTGCTTGATGTTTTGGGGTTTCG--CTTGT 611
consensus_8871#6      TTTCCGTTTGTGTACG-----AATTGTCTTTTGCTTG-TGTTTTGGGGTTTCG--CTTGT 335
consensus_8871#2      GCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGC 608
consensus_8871#5      GCAACAATTGCAAGCGTCTCAAATCGTCCAGCGGCGCCGGTCCAGCGCCGTCGGCACCGC 414
consensus_8871#1      CATNGTACTACCCACGCGCNCGCATGNCTCTGCTNACCNCNCAAAAAACTANAGGCACCA 795
                              *     **                                            

consensus_8871#0      ATGCTTAGGGGTGTCGAGTAGCGGAAGTGGAAAGAAGAAAAAAAAACCCAATTACTGTGA 1129
consensus_8871#3      ATGCTTAGGG-TGTCGAGTAGCGGAAGGTGGAAAAGGAAGANCAGNNNNNANACCCAAGT 682
consensus_8871#4      ATCTTTCTAG----CGCACAGTCCCAGCTGCGCACGTGGGGGAAAAGATGTGCGTTGCAC 667
consensus_8871#6      ATCTTTCTAG----CGCACAGTCCCAGCTGCGCACGTGGGG--AGAGATGTGCGTTGCAC 389
consensus_8871#2      AGCTACTGCAG---CAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGT 665
consensus_8871#5      AGCTACTGCAG---CAGCTAATGGCACCGTCGCCGGTACCGCAGAAGCTCAAGTCCAAGT 471
consensus_8871#1      ATCNACCATGGGCGCCAGTGGTCG-ACCAANACANCNTCGGGNAGNCGCGGCCCNCACAN 854
                      *             *          *                                  

consensus_8871#0      TA-GTTGAT--ATAATTTATAGTTTAAAGATAACTGAACTGAATCTAGCGACCGGATTAA 1186
consensus_8871#3      TA-ACTGGTG-ATAAGTTGATATACAATGTCTGATAGGTTCGAN--AGATACTGAANCT- 737
consensus_8871#4      CA-AATGGTA-GGAAAGC------------------------------------------ 683
consensus_8871#6      CA-AATGGTA-GGAAAGCAACAGCAAACCTTGCATATGCAGCATA-TGCAAACGCGCAAA 446
consensus_8871#2      CGCGATCCGC-ACAGGACGGTGGGGCCGGTGGCCGCTGGCCGAATGGGCACGCGGGCGGC 724
consensus_8871#5      CGCGATCCGC-ACAGGACGGTGGGGCC--------------------------------- 497
consensus_8871#1      CACANCGACCCACTNGGCGNANACNTACCCTATGTATATCCNCT--AACAGCCGNGNCAG 912
                                                                                  

consensus_8871#0      GGGCGGACGTATTGTTGGGCAGGAATGACAAGGCGGTTTTGTCGTGAAAAACTCGTCATT 1246
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      GTGTTTTGTTTTTGTTAGTTGTTAAATAAACACTTGT----------------------- 483
consensus_8871#2      AACGCGGGGCTGCTGCAGGAACAATCGGGCAACTCGGTCCTGATGAATCTGCTCGTCAGT 784
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      CCCNATNGNCTACCNCCCAGCGCNCAGNGTGGCAGACACCCCCCGGACATTNCACATCGN 972
                                                                                  

consensus_8871#0      ATTTTTTCGGTTAAGTGAAACGCAAATGCATCCAGGGAATTGTGTGCATATGCGCATGCG 1306
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      GGGTGCGATAAAACCATTCCACTGACACCACCGGAAATACTGATCGAGAACACGGGCATG 844
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      GCTCACCACNCAAGCTGGACTAGGCCCGTCTATACGCCAGCAGCGCANAAAACATGTGGG 1032
                                                                                  

consensus_8871#0      AAAGAAACTAAGAGAGAGAGAGAGCGGAAATAAAACAAAAAGAGGGTAGAAGAGGAAAAT 1366
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      GTAGAGCTTTCGTCCGATGGCAACACCACCCGTCCTGACATGCTGTTCAATCTTGGCGAT 904
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      ATAANGNTGACAAACNAACGCGCGCAACCNCCAACAGTACAAAAACCCCGTTATGGNCCG 1092
                                                                                  

consensus_8871#0      CCGCTCAAGGCAATGGCAGCAGCGTGCACTTATGCGCGGCTTTCCCCTTTTCAGCGATGC 1426
consensus_8871#3      ------------------------------------------------------------
consensus_8871#4      ------------------------------------------------------------
consensus_8871#6      ------------------------------------------------------------
consensus_8871#2      GAGGACGATAATGGCGTGCTGTTCAGCTCGACCAACCCACTGATCGGTGGACAAGCACCA 964
consensus_8871#5      ------------------------------------------------------------
consensus_8871#1      CAGTTAATTGNGTCCACCAGGACCCAAANNTACATTAGACCGTACAACACGAGCCCACCC 1152
                                                                                  

consensus_8871#0      ATAGTGAGATGCGTTTCGGGCATCATCGGATAAGCGTTACCACCACGCT---- 1475
consensus_8871#3      -----------------------------------------------------
consensus_8871#4      -----------------------------------------------------
consensus_8871#6      -----------------------------------------------------
consensus_8871#2      CTGAACGATGCACTCGCACGTCCACTCACAATTCAG----------------- 1000
consensus_8871#5      -----------------------------------------------------
consensus_8871#1      CCAACAAGNGCTGGTAAAAGCCAGGGGTAATCCACACNATCGGCATCCAAAGA 1205
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)