These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8876#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1066 fasta sequence [CCGCCGGTACGCCTCGATCAACACGCACCTGGGCATCGAGCAGTCGCGCCGGGACGATCTCGAGTCGCTCGGGTACGTGCTGATGTACTTCAACCTCGGCACGCTGCCCTGGCAGGGGCTGAAGGCGGCCAACAAGCGCCAGAAGTACGAGCGGATCTCGGAGAAGAAGCTGTCCACGCCGGTCGAGGAGCTGTGCAACGGGTACCCGCGCGAGTTCAGCCTCTATCTCGCGTACTGCCGCCACATGGACTTCATCCAGCGGCCGGACTACTGCTATCTGCGCAAGCTGTTCCGCACGCTCTTCCACCGGCAGGGCTTCGTGTACGATTACGTGTTCGACTGGAATATGCTCAAGTTCGGGCGGCCGAACCTGAACGCGTTCACCAGCATGAAGCGTGGCCAGAGCCGGACACCCAGTGCCACCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACCGCGCTCGTCAGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGTGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGCGGACCACAAACGCTCGGCGGCCAGCCGTCGGCGCACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTGGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGA] [+] EMBL BM619130 [CCGCCGGTACGCCTCGATCAACACGCACCTGGGCATCGAGCAGTCGCGCCGGGACGATCTCGAGTCGCTCGGGTACGTGCTGATGTACTTCAACCTCGGCACGCTGCCCTGGCAGGGGCTGAAGGCGGCCAACAAGCGCCAGAAGTACGAGCGGATCTCGGAGAAGAAGCTGTCCACGCCGGTCGAGGAGCTGTGCAACGGGTACCCGCGCGAGTTCAGCCTCTATCTCGCGTACTGCCGCCACATGGACTTCATCCAGCGGCCGGACTACTGCTATCTGCGCAAGCTGTTCCGCACGCTCTTCCACCGGCAGGGCTTCGTGTACGATTACGTGTTCGACTGGAATATGCTCAAGTTCGGGCGGCCGAACCTGAACGCGTTCACCAGCATGAAGCGTGGCCAGAGCCGGACACCCAGTGCCACCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACC ] [+] EMBL BM584025 [ CCGCCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACACCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACCGCGCTCGTCAGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGTGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGCGGACCACAAACGCTCGGCGGCCAGCCGTCGGCGCACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTGGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGA] [+] EMBL BX604303 [ AGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACCGCGCTCGTCGGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGGGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTAGT ] consensusID : consensus_8876#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 747 fasta sequence [CCGAAACGGGCAGCGCAGAGCACACACCACAGCGCACAGTGAAGTGTGAAGAAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGT--GTGTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCTGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGT--GAGAGTGTGTGCGTCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCA] [+] EMBL BM656509 [CCGAAACGGGCAGCGCAGAGCACACACCACAGCGCACAGTGAAGTGTGAAGAAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGT GTGTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCTGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGT GAGAGTGTGTGCGTCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTG ] [+] EMBL BM610037 [ ccgGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGTGAGTGTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCCGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGTGAGAGAGTGTGTGCGCCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGG GCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCCGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCA] consensusID : consensus_8876#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 700 fasta sequence [CCGGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAAGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGCTGCACATCGAGAGCAAGTTCTACAAAATGCTTCCAGGGCGCGGTCGGCATCCCGACGATCAAGTGGTGCGGCTCGGAGGGCGACTACAACG] [+] EMBL BM645588 [CCGGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAAGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGCTGCACATCGAGAGCAAGTTCTACAAAATGCTTCCAGGGCGCGGTCGGCATCCCGACGATCAAGTGGTGCGGCTCGGAGGGC ] [+] EMBL BX603326 [ GAGGACGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGCTGCACATCGAGAGCAAGTTCTACAAAATGC TCCAGGGCGCGGTCTGCATCCCGACGATCAAGTGGTGCGGCTCGGAGGGCGACTACAACG] consensusID : consensus_8876#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence [CCGCCCAACACGACGGCAGAAGGCAGGCAGGCAGTCATATCATTGTATTGCACACAACCGAGCGCACACGTTTTCTGTCCCGAGGAACCATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTACCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCA] [+] EMBL BM580690 [CCGCCCAACACGACGGCAGAAGGCAGGCAGGCAGTCATATCATTGTATTGCACACAACCGAGCGCACACGTTTTCTGTCCCGAGGAACCATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTACCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCA] consensusID : consensus_8876#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [GGCCAAGAATCNCGCACGAGGTGCAACAACAGCAGCAGCGTCGGCTACCGCGCTCGTCGGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGGGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTAGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGAATAATATTAACAGTGTTTCTCTAATTTGTATATACTTTCCATTCCCGCGCGCGCGCACACACNCAGNAAGCCCACAACTGTGTCGATAGTTCAAACTCGGACGACACGGCTCTGGCNCAAAGCAACCANNACCAGTAGGGAAATTACAGAACGGTACTAANGCGAAGCAN] [+] EMBL BX467281 [GGCCAAGAATCNCGCACGAGGTGCAACAACAGCAGCAGCGTCGGCTACCGCGCTCGTCGGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGGGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTAGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGAATAATATTAACAGTGTTTCTCTAATTTGTATATACTTTCCATTCCCGCGCGCGCGCACACACNCAGNAAGCCCACAACTGTGTCGATAGTTCAAACTCGGACGACACGGCTCTGGCNCAAAGCAACCANNACCAGTAGGGAAATTACAGAACGGTACTAANGCGAAGCAN] consensusID : consensus_8876#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 581 fasta sequence [CCAGGCAAGAATCGGCACGAGGTATATGCGGGTGACCTTTCTGGCGTGAACCCGTCCAATTTTGTCCGTGAGACAAACGGCAGGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGCAGAAGAGGAAGACTAAATCGTAACAGCCCAGCAAGGAGGACGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGNCTGCACATCGAGAGCAAGTTCTACAAAATGCTCCAGGGCGCGGTCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGGCGGCCAGCCGNCGGGCCACACAGTAA] [+] EMBL BX469371 [CCAGGCAAGAATCGGCACGAGGTATATGCGGGTGACCTTTCTGGCGTGAACCCGTCCAATTTTGTCCGTGAGACAAACGGCAGGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGCAGAAGAGGAAGACTAAATCGTAACAGCCCAGCAAGGAGGACGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGNCTGCACATCGAGAGCAAGTTCTACAAAATGCTCCAGGGCGCGGTCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGGCGGCCAGCCGNCGGGCCACACAGTAA] consensusID : consensus_8876#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGTGTGTTTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCCGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGTGAGTGTGTGCGCCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACTACGGGGCGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTA] [+] EMBL BM616519 [CCGCCCACGCGTCCGCCCACGCGTCCGAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGTGTGTTTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCCGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGTGAGTGTGTGCGCCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACTACGGGGCGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTA] consensusID : consensus_8876#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence [GCCCCGAGGTTTCGAGCGCACACGTTTTCTGTCCCGAGGAACATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTGCCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACCGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGC] [+] EMBL AL694557 [GCCCCGAGGTTTCGAGCGCACACGTTTTCTGTCCCGAGGAACATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTGCCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACCGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 CCGCCGGTACGCCTCGATCAACACGCACCTGGGCATCGAGCAGTCGCGCCGGGACGATCT 60 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 CGAGTCGCTCGGGTACGTGCTGATGTACTTCAACCTCGGCACGCTGCCCTGGCAGGGGCT 120 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 GAAGGCGGCCAACAAGCGCCAGAAGTACGAGCGGATCTCGGAGAAGAAGCTGTCCACGCC 180 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 GGTCGAGGAGCTGTGCAACGGGTACCCGCGCGAGTTCAGCCTCTATCTCGCGTACTGCCG 240 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 -----------------------------------------------------CCGAAAC 7 consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 CCACATGGACTTCATCCAGCGGCCGGACTACTGCTATCTGCGCAAGCTGTTCCGCACGCT 300 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 GGGCAGCGCAGAGCACACACCACAGCGCACAGTGAAGTGTGAAGAAGCAGTGAAAAAGAA 67 consensus_8876#6 ----------------CCGCCCACGCGTCCGCCCACGCGTCC--GAGCAGTGAAAAAGAA 42 consensus_8876#0 CTTCCACCGGCAGGGCTTCGTGTACGATTACGTGTTCGACTGGAATATGCTCAAGTTCGG 360 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 ACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACA 127 consensus_8876#6 ACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACA 102 consensus_8876#0 GCGGCCGAACCTGAACGCGTTCACCAGCATGAAGCGTGGCCAGAGCCGGACACCCAGTGC 420 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 --------------------------------------------CCGCCCAACACGACGG 16 consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 ATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGG 187 consensus_8876#6 ATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGG 162 consensus_8876#0 CACCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCA 480 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 CAGAAGGCAGGCAGGCAGTCATATCATTGTATTGCACACAACCGAGCGCACACGTTTTCT 76 consensus_8876#7 ------------------------------GCCCCGAGGTTTCGAGCGCACACGTTTTCT 30 consensus_8876#2 ------------------------------------------------------------ consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 GAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTA-AGGTGTTGTGT 246 consensus_8876#6 GAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTA-AGGTGTTGTGT 221 consensus_8876#0 GCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGT 540 consensus_8876#4 ------------------------------------------------------------ consensus_8876#3 GTCCCGAGGAACCATTTCCCAAGTC---GTCTCCTCTGTCGCTTATCTCTGTGTGCCCTT 133 consensus_8876#7 GTCCCGAGGAAC-ATTTCCCAAGTC---GTCTCCTCTGTCGCTTATCTCTGTGTGCCCTT 86 consensus_8876#2 -----------------------CC---GGCAGTGAAAAAGAAACACCTCACCCGTGTCG 34 consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 GTGTGTGTGT--CCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCC 304 consensus_8876#6 GTGTGTGTGTTTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCC 281 consensus_8876#0 AACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAA 600 consensus_8876#4 ------------------------------------------------------GGCCAA 6 consensus_8876#3 TATTGTTGTGTTGTGCTTCATT-GTGCAGTGCTGTGCGTGCCTTCCCGCTACCTGTGTAG 192 consensus_8876#7 TATTGTTGTGTTGTGCTTCATT-GTGCAGTGCTGTGCGTGCCTTCCCGCTGCCTGTGTAG 145 consensus_8876#2 TGCGCGTAGGTCGTGTTTCGTT-TCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAA 93 consensus_8876#5 ------------------------------------------------------------ consensus_8876#1 TGTTCCTGTTCTGTGCCCCGCA-CACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAG 363 consensus_8876#6 TGTTCCTGTTCCGTGCCCCGCA-CACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAG 340 consensus_8876#0 CAGCGTCA-ACAATGC-CAACAACAGCAGCAGCGTCGG-TACCGCGCTCGTCAGCAGCCA 657 consensus_8876#4 GAATCNCGCACGAGGTGCAACAACAGCAGCAGCGTCGGCTACCGCGCTCGTCGGCAGCCA 66 consensus_8876#3 AGCAGGGCCAAAGATGGTG----GCGGCGGCCACCCTTGTGTGTC-GAAGTCGTAGTCGT 247 consensus_8876#7 AGCAGGGCCAAAGATGGTG----GCGGCGGCCACCCTTGTGTGTC-GAAGTCGTAGTCGT 200 consensus_8876#2 AGGCTTCCTTAGTTTTTTC----GTGACCTCGCCGCGCGGACCAC-GGGGAACGTGCGTC 148 consensus_8876#5 ---------------------------------------------------CCAGGCAAG 9 consensus_8876#1 TGTCTGCGTGTGTGTGTGAGAGTGTGTGCGTCACAACCGTGTCCC-ACA-TGGACTCCGG 421 consensus_8876#6 TGTCTGCGTGTGTGTGTGA--GTGTGTGCGCCACAACCGTGTCCC-ACA-TGGACTCCGG 396 consensus_8876#0 CGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGC 717 consensus_8876#4 CGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGC 126 consensus_8876#3 TGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGG--TGTG--GCGTGAACC-GTCCA 302 consensus_8876#7 TGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGG--TGTG--GCGTGAACC-GTCCA 255 consensus_8876#2 AACCTA----GCCAAAGCACAGCGCACCA-ACCAT----CTGG--GCGTGAACC-GTCCA 196 consensus_8876#5 AATCGG----CACGAGGTATATGCGGGTG-ACCTT----TCTG--GCGTGAACCCGTCCA 58 consensus_8876#1 AGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAG--TCAAACGCGTGAACC-GTCCA 478 consensus_8876#6 AGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAG--TCAAACGCGTGAACC-GTCCA 453 consensus_8876#0 GGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCA 777 consensus_8876#4 GGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCA 186 * * * *** * * * ** consensus_8876#3 -TTTTGTCCGTGAGACAAACGGCAGGG-CAGCAGCAGCAGCAG---GATCATCCGCTCCG 357 consensus_8876#7 -TTTTGTCCGTGAGACAAACGGCAGGG-CAGCAGCAGCAGCAGCAGGATCATCCGCTCCG 313 consensus_8876#2 -TTTTGTCCGTGAGACAAACGGCAGGG----CAGCAGCAGCAGCAGGATCATCCGCTCCG 251 consensus_8876#5 ATTTTGTCCGTGAGACAAACGGCAGGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCG 118 consensus_8876#1 -TTTTGTCCGTGAGACAAACGGCAGGG----CAGCAGCAGCAGCAGGATCATCCGCTCCG 533 consensus_8876#6 -TTTTGTCCGTGAGACAAACGGCAGGG----CAGCAGCAG------GATCATCCGCTCCG 502 consensus_8876#0 GCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCG------GGCGGTGCGGGTGG 831 consensus_8876#4 GCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCG------GGCGGGGCGGGTGG 240 ** * * * *** **** ** * * ** * consensus_8876#3 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCG 414 consensus_8876#7 GAGCAGTCAAAAG-AGCGGCAACC-GACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTG 371 consensus_8876#2 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCG 308 consensus_8876#5 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTG 175 consensus_8876#1 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCG 590 consensus_8876#6 GAGCAGTCAAAAG-AGCGGCAAC--GACTACGGGGCGATCGCGAGTGGCAGGTGGAGGCG 559 consensus_8876#0 AAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGCGGACCACAAACGCT 891 consensus_8876#4 AAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCT 300 *** ** ** *** ***** * * * ** *** * * ** * * consensus_8876#3 CG-CAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGG 473 consensus_8876#7 CG-C-------------------------------------------------------- 374 consensus_8876#2 CG-CAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGG 367 consensus_8876#5 CG-CAGAAGAGGAAGACTAAATCGTAACAGCC--CAGCAAGGAGGACGAAAAGCACGTGG 232 consensus_8876#1 CG-CAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGG 649 consensus_8876#6 CG-CAGAAAAGGAAGACTA----------------------------------------- 577 consensus_8876#0 CGGCGGCCAGCCGTCGGCGCACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGG 951 consensus_8876#4 CGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGG 360 ** * consensus_8876#3 CCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTC 533 consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 CCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTC 427 consensus_8876#5 CCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTC 292 consensus_8876#1 CCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTC 709 consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 CGACCCGAGCGTGGATGCGGCGGTGGTGGCAGCTTCCTTCTCGC-GGCACGAAACGC-CC 1009 consensus_8876#4 CGACCCGAGCGTGGATGCGGCGGTAGTGGCAGCTTCCTTCTCGC-GGCACGAAACGC-CC 418 consensus_8876#3 CACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAA 593 consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 CACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAA 487 consensus_8876#5 CACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAA 352 consensus_8876#1 CACTGACGCCACTGCAACCACACAGACACCACCAGTCA---------------------- 747 consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 GAGCGCCGCTCCTCGATTTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGA--- 1066 consensus_8876#4 GAGCGCCGCTCCTCGATT-CGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGAATA 477 consensus_8876#3 GTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAA 653 consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 GTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAA 547 consensus_8876#5 GTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAA 412 consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 ------------------------------------------------------------ consensus_8876#4 ATATTAACAGTGTTTCTCTAATTTGTATATACTTTCCATTCCCGCGCGCGCGCACACACN 537 consensus_8876#3 CATCTCCACCGGCGAGGAGGTCGCGATCA------------------------------- 682 consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 CATCTCCACCGGCGAGGAAGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCA 607 consensus_8876#5 CATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCA 472 consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 ------------------------------------------------------------ consensus_8876#4 CAGNAAGCCCACAACTGTGTCGATAGTTCAAACTCGGACGACACGGCTCTGGCNCAAAGC 597 consensus_8876#3 ------------------------------------------------------------ consensus_8876#7 ------------------------------------------------------------ consensus_8876#2 GC-TGCACATCGAGAGCAAGTTCTACAAAATGCTTCCAGGGCGCGGTCGGCATCCCGACG 666 consensus_8876#5 GNCTGCACATCGAGAGCAAGTTCTACAAAATGCT-CCAGGGCGCGGTCGGCATGGTGATG 531 consensus_8876#1 ------------------------------------------------------------ consensus_8876#6 ------------------------------------------------------------ consensus_8876#0 ------------------------------------------------------------ consensus_8876#4 AACCANNACCAGTAGGGAAATTACAGAACGGTACTAANGCGAAGCAN------------- 644 consensus_8876#3 -------------------------------------------------- consensus_8876#7 -------------------------------------------------- consensus_8876#2 ATCAAGTGGT-GCGGCTCGGAGGGCGACTA--CAACG------------- 700 consensus_8876#5 GGCGGTGGGCCACAAACGCTCGGGCGGCCAGCCGNCGGGCCACACAGTAA 581 consensus_8876#1 -------------------------------------------------- consensus_8876#6 -------------------------------------------------- consensus_8876#0 -------------------------------------------------- consensus_8876#4 -------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||